Metagenome Family F084793

Basic Information
Family ID	F084793
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	70 residues
Representative Sequence	MIFLHRLGIVLYWVGYFLAILFAIGSLLAALNGLISGGPISEACVFAVLSVVSWLWGRAMKYILTDM
Number of Associated Samples	85
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.536 % of family members)
Environment Ontology (ENVO)	Unclassified (33.929 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.571 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128. 1INPhiseqgaiiFebDRAFT_1015524351 2INPhiseqgaiiFebDRAFT_1015537622 3INPhiseqgaiiFebDRAFT_1015547412 4INPhiseqgaiiFebDRAFT_1015548541 5JGI1027J11758_127687392 6JGIcombinedJ26739_1006839801 7Ga0066388_1028562612 8Ga0066388_1039260742 9Ga0070713_1007471001 10Ga0070708_1009817951 11Ga0070706_1002696153 12Ga0070706_1002954101 13Ga0070706_1010203953 14Ga0070699_1008424261 15Ga0066903_1001874613 16Ga0081455_101877513 17Ga0081540_10042542 18Ga0075028_1007286623 19Ga0070715_101513233 20Ga0070716_1002144611 21Ga0066665_101951872 22Ga0066659_113747312 23Ga0099829_108683093 24Ga0126374_103008722 25Ga0126374_110247742 26Ga0126380_100455831 27Ga0126380_107345482 28Ga0126384_120837371 29Ga0126382_122700962 30Ga0126373_102902442 31Ga0126370_108344991 32Ga0126372_104170082 33Ga0126377_103313062 34Ga0126379_117543941 35Ga0126381_1008102612 36Ga0126383_102047853 37Ga0126383_133052191 38Ga0137383_100241736 39Ga0137378_113816732 40Ga0137377_103043712 41Ga0137360_102524564 42Ga0137359_101362824 43Ga0137404_111413882 44Ga0126369_100267482 45Ga0132258_102590145 46Ga0132256_1003522351 47Ga0132256_1028579792 48Ga0132257_1012801511 49Ga0132255_1036234401 50Ga0182033_111228471 51Ga0182033_115793381 52Ga0182035_113094671 53Ga0182032_110025801 54Ga0182034_100982003 55Ga0182040_104470391 56Ga0182040_113856801 57Ga0182039_106783701 58Ga0182038_101618201 59Ga0187785_106222591 60Ga0193729_10065975 61Ga0179594_100619862 62Ga0210407_102301821 63Ga0210407_102420653 64Ga0210403_100243767 65Ga0210403_101093992 66Ga0210399_104117412 67Ga0210399_111227041 68Ga0210387_108056863 69Ga0210402_101904444 70Ga0126371_100087751 71Ga0126371_103860423 72Ga0207684_101323684 73Ga0207684_102256614 74Ga0207684_103776592 75Ga0207684_107657741 76Ga0207646_103998751 77Ga0207646_118906592 78Ga0207700_102070261 79Ga0207665_109502583 80Ga0179587_109789561 81Ga0170824_1124518871 82Ga0170820_173165001 83Ga0318541_107085711 84Ga0318538_106609181 85Ga0318515_106523312 86Ga0310915_105397911 87Ga0306917_101508922 88Ga0307469_105787713 89Ga0306918_113688011 90Ga0318557_104591502 91Ga0318567_101814932 92Ga0310917_104164322 93Ga0310917_107586032 94Ga0306919_102427412 95Ga0306919_114736761 96Ga0306925_109136561 97Ga0306925_119758602 98Ga0306923_124008542 99Ga0306921_103136363 100Ga0310916_102613981 101Ga0310916_112309642 102Ga0310913_107339681 103Ga0306926_109936771 104Ga0306926_123912961 105Ga0306922_103596512 106Ga0306922_117493271 107Ga0306922_122524782 108Ga0310911_103906871 109Ga0318558_107156372 110Ga0318532_101826621 111Ga0306920_1014250641 112Ga0310914_103026974
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.21% β-sheet: 0.00% Coil/Unstructured: 35.79%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03118	RNA_pol_A_CTD	2.68
PF01791	DeoC	2.68
PF00313	CSD	1.79
PF04226	Transgly_assoc	1.79
PF07508	Recombinase	1.79
PF13414	TPR_11	0.89
PF13561	adh_short_C2	0.89
PF13302	Acetyltransf_3	0.89
PF14552	Tautomerase_2	0.89
PF12071	DUF3551	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	2.68
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.79
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.79

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	0.89%
Plants	Host-Associated → Plants	6.25%
Terrestrial	Environmental → Terrestrial	92.86%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Sediment	Environmental → Aquatic → Sediment	0.89%
Soil	Environmental → Terrestrial → Soil	92.86%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Loam	Environmental → Terrestrial → Soil → Loam	17.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015524351	3300000364	Soil	MTFIHRLGIVLYWVGCVFAILFAIAGALIVLNGLISGAPMSAVWVFAVLSVVCWVWGWLMRYILADI*
INPhiseqgaiiFebDRAFT_1015537622	3300000364	Soil	MTFIHRLGIVLYWVGCVFAILXAIAGALIXLNGLISGAPMSGVWVFAVLGVVSWIWGRLMKXILTEM*
INPhiseqgaiiFebDRAFT_1015547412	3300000364	Soil	MTFIHRLGIVLYWVGCVFAILXAIAGALIXLNGLISGAPMSXVWVXAVLXVVXWXWGXLMXXILXXX*
INPhiseqgaiiFebDRAFT_1015548541	3300000364	Soil	MTFIHRLGIVLYWVGYALAILFAIVSLLIALNGLISGGGAISGAWVYAVLSVVCWLWGRAMKYYSHRDAVSAAWS
JGI1027J11758_127687392	3300000789	Soil	MTFIHRLGIVLYWVGCVFAILLAIAGALIALNGLISGAPMSGVWVFAVLGVVSWIWGRLMKFILTEM*
JGIcombinedJ26739_1006839801	3300002245	Forest Soil	LIDWEPRSWVGLVLAILFAIGSLLIALNGLTSGGPISEAWVFAGLSVISWLWGRAMKYILTEM*
Ga0066388_1028562612	3300005332	Tropical Forest Soil	MIFIHRPGIVLYWVGYVLALMLAIVSLLVALNGLTSGGPISEACAFAVLSVVSWLWGRAMKYILTDM*
Ga0066388_1039260742	3300005332	Tropical Forest Soil	MIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM*
Ga0070713_1007471001	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GIVLYWVGYAFAILFAIGSLLIALNGLISGEPISRAWILGVLSVVSWLWGRAMRYILADTWSDR*
Ga0070708_1009817951	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIFIHRLGIALYWVGCFFAVLCAIAGALFVVSGLVSGGSILGAWVFGVFCVVCWIWGSLMRYILADM*
Ga0070706_1002696153	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIFIHRLGIVLYWVGCAFAVLFAIVGALIVLNGLISGGPMSGVWVFAVLGVVSWIWGRLMKFILTEM*
Ga0070706_1002954101	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIFLHRLGIVLYWVGYGFAILFAIVSLLIALSGLSFGGPISEAWVFAVLSVVTWLWGRAMKYILTDT*
Ga0070706_1010203953	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIFIHRLGIVLYWVGYAFAALFAVASLAIAFNGLISGRPISEAWFYAVFSVVCWVWGWLMKSILTDR*
Ga0070699_1008424261	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LGIVLYWVGCAFAVLFAIVGALIVLNGLISGGPMSGVWVFAVLGVVSWIWGRLMKFILTEM*
Ga0066903_1001874613	3300005764	Tropical Forest Soil	MILFIHRLGLVLHWAGYGLALPFAIVSLLVALNCLISGGPISEACVFAVPSVVSWLLGRAMKYILTDM*
Ga0081455_101877513	3300005937	Tabebuia Heterophylla Rhizosphere	MIFLHRLGIVLYWVGYALAILFAIVSLLYAFNNLSFGGPISEAWIFAVLSVVSWLWGRAMKYILTDM*
Ga0081540_10042542	3300005983	Tabebuia Heterophylla Rhizosphere	MIFLHQLGIVLYWVGYALAILFAIVSLLYAFNSLSFGGPISEAWIFAVLSVVAWLWGRAMKYILTDME*
Ga0075028_1007286623	3300006050	Watersheds	MIFLRRLGIVLYWVGYALAILFAIVSLLIALNDLRGFGGPISKAWVFAVLSVVAWLWGRAMKYILADT*
Ga0070715_101513233	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RLGIVLYWVGYAFAILFAIGSLLIALNGLISGEPISRAWILGVLSVVSWLWGRAMRYILADTWSDR*
Ga0070716_1002144611	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TPHSGDRPMIFLHRLGIVLYWVGYAFAILFAIGSLLIALNGLISGEPISRAWILGVLSVVSWLWGRAMRYILADTWSDR*
Ga0066665_101951872	3300006796	Soil	MIFLHRLGIVLYWVGYVLAVLFAIGSLLIALNGLIFGGPISGAWVFAVLSAVCWIWGRLMKYILIEM*
Ga0066659_113747312	3300006797	Soil	MIFIHRLGIVLYWVGYVLAVLFAIGSLLIALNGLIFGGPISGAWVFAVLSAVCWIWGRLMKYILIEM*
Ga0099829_108683093	3300009038	Vadose Zone Soil	MTFIHRLGIVLYWVGFVFAILFAIAGALFVVNGLVSGGPISAAWVFAVLSAVCWIWGRLMKFILADM*
Ga0126374_103008722	3300009792	Tropical Forest Soil	VKVMAQAIASSMRLCRPVESAFRRQAMIFIHRLGIVLYSAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTE
Ga0126374_110247742	3300009792	Tropical Forest Soil	VKVTAQAITSLMRLCRPVESAFRRQAMIFIHRLGIVLYWGGYGLALLFAIVSLLIALNGLIFGESISEACAYAVLSVVSWLWGRAMKYILTEM*
Ga0126380_100455831	3300010043	Tropical Forest Soil	IHLLGIVLYWVGYVLALMLAIVSLLVALNGLTSGGPISEACAFAVLSVVSWLWGRAMKYILTDM*
Ga0126380_107345482	3300010043	Tropical Forest Soil	MIFIHRLGIVLYWAGYSLALLFAIMSLLVAFNGLISGGPISEACVFAVLSVVSWLWGRAMKYILTDM*
Ga0126384_120837371	3300010046	Tropical Forest Soil	QAMILFIHRLGLLLHWAGYGLALPFAIVSLLVALNCLISGGPISEACVFAVPSVVSWLLGRAMKYFLFFM*
Ga0126382_122700962	3300010047	Tropical Forest Soil	NLHSGDRPMMFLHRLGIVLYWVGYALAILFAIVSLLIALNGLISGGGAISRAWVYAVLSVVCWLWGRAMKYILTDM*
Ga0126373_102902442	3300010048	Tropical Forest Soil	VKVMAQAIASSMRLCRPVESAFRRQAMIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM*
Ga0126370_108344991	3300010358	Tropical Forest Soil	MILFIHRLGLVLYWAGYGLALPFAIVSLLVALNCLISGGPISEACVFAVPSVVSWLLGRAMKYILTDM*
Ga0126372_104170082	3300010360	Tropical Forest Soil	LLHWAGYGLALPFAIVSLLVALNCLISGGPISEACVFAVPSVVSWLLGRAMKYILTDM*
Ga0126377_103313062	3300010362	Tropical Forest Soil	VKVTAQAITSLMRLCRPVESAFRRQAMIFIHRLGIVLYWGGYGLALLFAIVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM*
Ga0126379_117543941	3300010366	Tropical Forest Soil	MIFIHRLGIVLYWVGYALALLFAILSLLVALNALTSGGPISEACVFAVLSVVSWLWGRAMKYILTDM*
Ga0126381_1008102612	3300010376	Tropical Forest Soil	MILFIHRLGLVLHWAGYCLALPFAIVSLLVALNCLISGGPISEACVFAVPSVVSWLLGRAMKYILTDM*
Ga0126383_102047853	3300010398	Tropical Forest Soil	VKVTAQAITSLMRLCRPVESAFRRQAMIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM*
Ga0126383_133052191	3300010398	Tropical Forest Soil	SAPWRNAVASAPAVRLKSAFRRQAMIFIHRLGIVLYWAGYSLALLFAIMSLLVAFNGLISGGPISEACVFAVLSVVSWLWGRAMKYILTDM*
Ga0137383_100241736	3300012199	Vadose Zone Soil	MIFLRRLGIVLYWVGYVLAVLFAIGSLLIALNGLIFGGPISGAWVFAVLSAVCWIWGRLMKYILIEM*
Ga0137378_113816732	3300012210	Vadose Zone Soil	MTFIHRLGIVLYWVGCVFAILFAIAGALIVLNGLISGAPMSGVWVFAVLGVVSWIWGRLMKFILTEM*
Ga0137377_103043712	3300012211	Vadose Zone Soil	MIFLHRLGIVLSWVGYVLAVLFAIGSLLIALNGLIFGGPISGAWVFAVLSAVCWIWGRLMKYILIEM*
Ga0137360_102524564	3300012361	Vadose Zone Soil	RLGIVLYWVGYVLAVLFAIGSLLIALNGLIFGGPISGAWVFAVLSAVCWIWGRLMKYILTEM*
Ga0137359_101362824	3300012923	Vadose Zone Soil	MIFLHRLGIVLYWVGYVLAVLFAIGSLLIALNGLIFGGPISGAWVFAVLSAVCWIWGRLMKYILTEM*
Ga0137404_111413882	3300012929	Vadose Zone Soil	MIFLRRLGIVLYWVGYGFAILFAIVSLLIALNDLRSFGGPISEAWVFAVLSAVCWIWGRLMKFILADM*
Ga0126369_100267482	3300012971	Tropical Forest Soil	MAQAIASSMRLCRPVESAFRRQAMIFIHRLGIVLYWGGYGLALLFAIVSLLIALNGLIFGESISEACAYAVLSVVSWLWGRAMKYILTEM*
Ga0132258_102590145	3300015371	Arabidopsis Rhizosphere	MLYWFGFAFAVLFAIAGALFVVSGQVSGVPIYDAWVFAVLSAVCWIWGRLMKFILTDT*
Ga0132256_1003522351	3300015372	Arabidopsis Rhizosphere	MTFIYRLGTVLYWTGFAFAVLFAIAGALFVVSGQVSGVPIYDAWVFAVLSAVCWIWGRLMKFILTDT*
Ga0132256_1028579792	3300015372	Arabidopsis Rhizosphere	RISREFGRQAMTFIYRLGTVLYWVGFAFAVLFAIAGALFVVSGQVSGVPISDAWVFAVLSAVSWIWGRLMKFILTDT*
Ga0132257_1012801511	3300015373	Arabidopsis Rhizosphere	MTFIYRLGTVLYWVGFAFAVLFAIAGALFVVSGQVSGVPISDAWVFAVLSAVSWIWGRLMKFILTDT*
Ga0132255_1036234401	3300015374	Arabidopsis Rhizosphere	MTFIYRLGTVLYWVGFAFAVLFAIAGALFVVSGQVSGVPISDAWVFAVLSAVCWIWGRLMKFILTDT*
Ga0182033_111228471	3300016319	Soil	MIFIHRLGIVLYWVGYVLALMLAIVSLLAALNSLTSGGPISEACVFAVLSVVSWLWG
Ga0182033_115793381	3300016319	Soil	MIFIYRLGIVLYWVGYVLALMLAIVSLLAALNGLTSGGPISEACVFAVLSVVSWLWGRAMKYILTDM
Ga0182035_113094671	3300016341	Soil	MIFLHRLGIVLYWVGYFLAILFAIGSLLAALNGLISGGPISEACVFAVLSVVSWLWGRAMKY
Ga0182032_110025801	3300016357	Soil	SEKHFRALAKRRNLYARRPVESALRRQAMIFIRRLGIVLYWVGYVLALLFAIVSLPIALNALISGGTIREAWVYAVLSVVCWIWGRLMKYILTDM
Ga0182034_100982003	3300016371	Soil	MIFIHRLGIVLYWVGYAVALLFAIVSLLVALNGLTSSGPISEACVFTVLSVVFGLWGRATKYILSDM
Ga0182040_104470391	3300016387	Soil	VESALRRQAMIFIRRLGIVLYWVGYVLALLFAIVSLPIALNALISGGTIREAWVYAVLSVVCWIWGRLMKYILTDM
Ga0182040_113856801	3300016387	Soil	MIFLHRLGIVLYWVGYFLAILFAIGSLLAALNGLISGGPISEACVFAVLSVVSWLWGRAMKYILTDM
Ga0182039_106783701	3300016422	Soil	MILIHRLGIVLYWVGYALALLFAILSLLVALNALTSGGPISEACVFAVLSVVSWLWGRTMKYILTDM
Ga0182038_101618201	3300016445	Soil	MIFIHRPGIVLYWVGYVLALMLAIVSLLAALNGLTSGGPISEACVFAVLSVVSWLWGRAMKYILTDM
Ga0187785_106222591	3300017947	Tropical Peatland	MIFIHRLGLVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0193729_10065975	3300019887	Soil	MIFIHRLGTALYWVGLVLAILFAIGSLLIALNGLTSGGPIFEAWVFAGLSIVSWLWGRAMEYTPTEI
Ga0179594_100619862	3300020170	Vadose Zone Soil	MTFIHRLGIVLYWVGFVFAILFAIAGALFVVNGLVSGGPISAAWVFAVLSAVCWIWGRLMKFILADM
Ga0210407_102301821	3300020579	Soil	DRRMIFIHRLGIVLYWAGYGLALLFAIVSLLTALNGLIFGGPISEACVYAVLSVVSWLWGRVMKYILTEM
Ga0210407_102420653	3300020579	Soil	MIFLHRLGIVLYWVGNVLAILFAIASLPNAINGLVSGGPISRAWVFAVLSPVCWIWGRAMKYILTDM
Ga0210403_100243767	3300020580	Soil	MTFIHRLERLGIVLYWVGYSLAILFAIVSLLISLNGLVFGGPISGAWVFTVLSPICWIWGRLMRFILTD
Ga0210403_101093992	3300020580	Soil	MIFIHRLGIVLYWAGYGLALLFAIVSLLTALNGLIFGGPISEACVYAVLSVVSWLWGRVMKYILTEM
Ga0210399_104117412	3300020581	Soil	MIFLHRLGIVLYWVGYVFAILFAIVGLLVALNGLSFGGPISEAWVFVVLSVVTWLWGQAMKYILADT
Ga0210399_111227041	3300020581	Soil	TFIHRLERLGIVLYWVGYSLAILFAIVSLLISLNGLVFGGPISGAWVFTVLSPVCWIWGRLMRFILTEM
Ga0210387_108056863	3300021405	Soil	MIFIHRLGIVLYWAGYGLALLFAIVSLLTALNGLIFGGPISEACVYAVLSVVSWLWGRAMKYILADTWSDR
Ga0210402_101904444	3300021478	Soil	HRLERLGIVLYWVGYSLAILFAIVSLLISLNGLVFGGPISGAWVFTVLSPICWIWGRLMRFILTD
Ga0126371_100087751	3300021560	Tropical Forest Soil	MIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0126371_103860423	3300021560	Tropical Forest Soil	MILFIHRLGLVLHWAGYGLALPFAIVSLLVALNCLISGGPISEACVFAVPSVVSWLLGRAMKYILTDM
Ga0207684_101323684	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTFIHRLGIALYWVGWVFAILFAIAGALFAISGLISGGRISGAWVFAVLSVVCWVWGWLMRYILSDI
Ga0207684_102256614	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIFLHRLGIVLYWVGYGFAILFAIVSLLIALSGLSFGGPISGAWVFAVLSVVCWVWGWLMRYILADM
Ga0207684_103776592	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIFIHRLGIVLYWVGCAFAVLFAIVGALIVLNGLISGGPMSGVWVFAVLGVVSWIWGRLMKFILTEM
Ga0207684_107657741	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIFIHRLGIVLYWVGYAFAALFAVASLAIAFNGLISGRPISEAWFYAVFSVVCWVWGWLMKSILTDR
Ga0207646_103998751	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIFLHRLGIVLYWVGYGFAILFAIVSLLIALSGLSFGGPISEAWVFAVLSVVTWLWGRAMKYILTDT
Ga0207646_118906592	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIFLHRLGIVLYWVGYVFAVLFAIGGALFVHNGLVCGGPISGAWVFAVLSPVCWIWGWLMKYILTDM
Ga0207700_102070261	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LGIVLYWVGYAFAILFAIGSLLIALNGLISGEPISRAWILGVLSVVSWLWGRAMRYILADTWSDR
Ga0207665_109502583	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIFLHRLGIVLYWVGYAFAILFAIGSLLIALNGLISGEPISRAWILGVLSVVSWLWGRAMRYILADTWSDR
Ga0179587_109789561	3300026557	Vadose Zone Soil	MTFIHRLGIVLYWVGFVFAILFAIAGALFVVNGLVSGGPISAAWVFAVLSAVCWIWGRLM
Ga0170824_1124518871	3300031231	Forest Soil	MTFIHRLERLGIVLYWVGYSLAILFAIVSLLISLNGLVFGGPISEAWVLVFTVLSPVCWIWGRLMRFILTEM
Ga0170820_173165001	3300031446	Forest Soil	MTFIHRLERLGIVLYWVGYSLAILFAIVSLLISLNGLVFGGPISWACVLTVLSPVCWIWGRLMRFILTEM
Ga0318541_107085711	3300031545	Soil	MIFIHGLGIVLYWVGYVLALMLAIVSLLAALNGLTSSGPISEACVFAVLSVVSWLWGRAMKYILTDM
Ga0318538_106609181	3300031546	Soil	MIFIHRLGIVLYWVGYVLALMLAIVSLLAALNGLTSSGPISEACVFAVLSVVSWLWGRAMKYILTDI
Ga0318515_106523312	3300031572	Soil	MIFIHRLGIVLYWVGYVLALLFAIVSLPIALNALISGGTIREAWVYAVLSVVCWIWGRLMKYILTDM
Ga0310915_105397911	3300031573	Soil	MIFIHRLGIVLYWVGYAVALLFAIVSLLVALNGLTSSGPISEACVFTVLSVVSWLWGRATKYILSDM
Ga0306917_101508922	3300031719	Soil	MIFIHRLGIVLYWAGYGLALLFAIVSLLIALNGLIFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0307469_105787713	3300031720	Hardwood Forest Soil	MIFIHRLGIVLYWAGYGLALLFAIVSLLTALNGLIFGGPISEACVYAVLSVVSWLWGQVMKYILTEM
Ga0306918_113688011	3300031744	Soil	PCRNAVAFTPPPVVSAFWGQAMIFIHRLGIVLYWVGYAVALLFAIVSLLVALNGLTSSGPISEACVFTVLSVVSWLWGRATKYILSDM
Ga0318557_104591502	3300031795	Soil	MIFIRRLGIVLYWVGYVLALLFAIVSLPIALNALISGGTIREAWVYAVLSVVCWIWGRLMKYILTDM
Ga0318567_101814932	3300031821	Soil	GIVLYWVGYVLALLFAIVSLPIALNALISGGTIREAWVYAVLSVVCWIWGRLMKYILTDM
Ga0310917_104164322	3300031833	Soil	RRPVESAFRRQAMIFIHRLGIVLYWVGYVLALMLAIVSLLAALNGLTSSGPISEACVFAVLSVVSWLWGRAMKYILTDM
Ga0310917_107586032	3300031833	Soil	MIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYTLREM
Ga0306919_102427412	3300031879	Soil	MAQAIASSMRLCRPVESALRRQAMIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0306919_114736761	3300031879	Soil	MIFLHRLGIVLYWVGYFLAILFAIGSLLAALNGLISGGPISEACVFAVLSVVSWLWGRAMKYILTDI
Ga0306925_109136561	3300031890	Soil	MIFIHRLGIVLYWVGYVLALMLAIVSLLAALNGLTSGGPISEACVFAMLSVVSWLWGRAMKYILTDM
Ga0306925_119758602	3300031890	Soil	MIFIHRLGIVLYWGGYGLALLFAIVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0306923_124008542	3300031910	Soil	MIFIHRLGIVLYWVGYALALLFAILSLLVALNALTSGGPISEACVFAVLSVVSWLWGRAMKYILTDM
Ga0306921_103136363	3300031912	Soil	LSRRHGDKQYSASEVTAQAIASSMRLCRPESAVRRQAMIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0310916_102613981	3300031942	Soil	MIFIRRLGIVLYWVGYVLALLFAIVSLPIALNALISGGTIREAWVYAVLSVVCWIWGRLMKYIFTDM
Ga0310916_112309642	3300031942	Soil	RQAMNFIHRLGIVLYWVGYALALLFAILSLLVALNGLTSGGPISEACVFAVLSVVSLLWGRTMKYILTDM
Ga0310913_107339681	3300031945	Soil	AQAIASSMRLCRPESAFRRQAMIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0306926_109936771	3300031954	Soil	AFRRQAMIFIHRLGIVLYWVGYVLALMLAIVSLLAALNGLTSGGPISEACVFAMLSVVSWLWGRAMKYILTDM
Ga0306926_123912961	3300031954	Soil	MIFIHQLGIVLYWVGYALALLFAILSLLVALNGLTSGGPISEACVFAVLSVVSLLWGRTMKYILTDM
Ga0306922_103596512	3300032001	Soil	MIFIHRLGIVLYWGGYGLALLFAIVSLLIALNGLIFGESISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0306922_117493271	3300032001	Soil	MIFIHRLGIVLYWVGYVLALMLAIVSLLAALNGLTSGGPISAACVFAVLSVVSWLWGR
Ga0306922_122524782	3300032001	Soil	MAQAIASSMRLCRPVESAFRRQAMIFIHRLGIVLYWAGYGLALLFAFVSLLIALKGLVFGGSISEACAYAVLSVVSWLWGRAMKYIFTEM
Ga0310911_103906871	3300032035	Soil	MIFIHRLGIVLYWVGYVLALMLAIVSLLAALNGLTSSGPISEACVFAVLSVVSWLWGRAMKYILTDM
Ga0318558_107156372	3300032044	Soil	VESALRRQAMIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYILTEM
Ga0318532_101826621	3300032051	Soil	MIFIHRLGIVLYWAGYGLALLFAFVSLLIALNGLVFGGSISEACAYAVLSVVSWLWGRAMKYIFTEM
Ga0306920_1014250641	3300032261	Soil	MIFIHRLGIVLYWVGYVLALMLAIVSLLAALNGLTSSGPISEACVFAVLNVVSWLWGRAMKYILTDM
Ga0310914_103026974	3300033289	Soil	PGIVLYWVGYVLALMLAIVSLLAALNGLTSGGPISEACVFAVLSVVSWLWGRAMKYILTD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084793

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences