Metagenome Family F084737

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084737
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	71 residues
Representative Sequence	MINQLNEIDSSEKIDAIEQHLLAQINRMQIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRNLVKEMGDALNE
Number of Associated Samples	39
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.39 %
% of genes near scaffold ends (potentially truncated)	36.61 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	28
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (45.536 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (66.071 % of family members)
Environment Ontology (ENVO)	Unclassified (96.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.00% β-sheet: 0.00% Coil/Unstructured: 39.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF14236	DUF4338	13.39
PF00239	Resolvase	10.71
PF00958	GMP_synt_C	0.89
PF01555	N6_N4_Mtase	0.89
PF02955	GSH-S_ATP	0.89
PF04545	Sigma70_r4	0.89
PF00528	BPD_transp_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	10.71
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	10.71
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	1.79
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.89
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.89
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.89
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.46 %
Unclassified	root	N/A	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Viruses	superkingdom	All Organisms → Viruses	36.61 %
cellular organisms	root	All Organisms → cellular organisms	17.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.61 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	16.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.61 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	16.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.61 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	16.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.61 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	16.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001450\|JGI24006J15134_10010949	All Organisms → Viruses → Predicted Viral	4452	Open in IMG/M
3300001450\|JGI24006J15134_10018302	All Organisms → Viruses → Predicted Viral	3269	Open in IMG/M
3300001450\|JGI24006J15134_10185238	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	649	Open in IMG/M
3300001589\|JGI24005J15628_10110190	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	906	Open in IMG/M
3300006164\|Ga0075441_10021210	All Organisms → Viruses → Predicted Viral	2684	Open in IMG/M
3300006164\|Ga0075441_10064427	All Organisms → Viruses → Predicted Viral	1435	Open in IMG/M
3300006164\|Ga0075441_10090555	Not Available	1178	Open in IMG/M
3300006164\|Ga0075441_10142236	Not Available	906	Open in IMG/M
3300006164\|Ga0075441_10167520	Not Available	825	Open in IMG/M
3300006164\|Ga0075441_10170406	Not Available	817	Open in IMG/M
3300006165\|Ga0075443_10337801	Not Available	558	Open in IMG/M
3300006190\|Ga0075446_10012030	All Organisms → Viruses → Predicted Viral	3023	Open in IMG/M
3300006190\|Ga0075446_10032831	All Organisms → Viruses → Predicted Viral	1672	Open in IMG/M
3300006190\|Ga0075446_10044653	All Organisms → Viruses → Predicted Viral	1389	Open in IMG/M
3300006190\|Ga0075446_10054011	All Organisms → Viruses → Predicted Viral	1237	Open in IMG/M
3300006190\|Ga0075446_10054684	Not Available	1228	Open in IMG/M
3300006190\|Ga0075446_10093900	Not Available	884	Open in IMG/M
3300006190\|Ga0075446_10103236	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	834	Open in IMG/M
3300006190\|Ga0075446_10156134	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	649	Open in IMG/M
3300006190\|Ga0075446_10173550	Not Available	608	Open in IMG/M
3300006191\|Ga0075447_10005988	Not Available	5257	Open in IMG/M
3300006191\|Ga0075447_10038337	All Organisms → Viruses → Predicted Viral	1812	Open in IMG/M
3300006191\|Ga0075447_10039695	All Organisms → Viruses → Predicted Viral	1776	Open in IMG/M
3300006191\|Ga0075447_10049534	All Organisms → Viruses → Predicted Viral	1552	Open in IMG/M
3300006191\|Ga0075447_10083615	All Organisms → Viruses → Predicted Viral	1123	Open in IMG/M
3300006191\|Ga0075447_10087553	All Organisms → Viruses → Predicted Viral	1091	Open in IMG/M
3300006191\|Ga0075447_10099541	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300006191\|Ga0075447_10108391	Not Available	957	Open in IMG/M
3300006191\|Ga0075447_10111469	Not Available	941	Open in IMG/M
3300006191\|Ga0075447_10310997	Not Available	506	Open in IMG/M
3300006193\|Ga0075445_10163606	Not Available	794	Open in IMG/M
3300006193\|Ga0075445_10209864	Not Available	677	Open in IMG/M
3300006193\|Ga0075445_10239929	Not Available	623	Open in IMG/M
3300006352\|Ga0075448_10036587	All Organisms → Viruses → Predicted Viral	1578	Open in IMG/M
3300006352\|Ga0075448_10098304	Not Available	919	Open in IMG/M
3300006352\|Ga0075448_10115646	Not Available	837	Open in IMG/M
3300006947\|Ga0075444_10095103	All Organisms → Viruses → Predicted Viral	1313	Open in IMG/M
3300006947\|Ga0075444_10213417	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	774	Open in IMG/M
3300006947\|Ga0075444_10283304	Not Available	643	Open in IMG/M
3300006947\|Ga0075444_10379871	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	533	Open in IMG/M
3300009172\|Ga0114995_10176636	All Organisms → Viruses → Predicted Viral	1189	Open in IMG/M
3300009172\|Ga0114995_10398728	Not Available	754	Open in IMG/M
3300009409\|Ga0114993_10444759	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	969	Open in IMG/M
3300009425\|Ga0114997_10653025	Not Available	552	Open in IMG/M
3300009441\|Ga0115007_10701003	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	679	Open in IMG/M
3300009512\|Ga0115003_10069830	All Organisms → Viruses → Predicted Viral	2194	Open in IMG/M
3300009705\|Ga0115000_10712468	Not Available	619	Open in IMG/M
3300009785\|Ga0115001_10131948	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300009785\|Ga0115001_10763406	Not Available	584	Open in IMG/M
3300009785\|Ga0115001_10829622	Not Available	557	Open in IMG/M
3300020309\|Ga0211681_1017351	All Organisms → Viruses → Predicted Viral	1257	Open in IMG/M
3300020372\|Ga0211683_10052932	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1335	Open in IMG/M
3300020372\|Ga0211683_10077402	All Organisms → Viruses → Predicted Viral	1082	Open in IMG/M
3300020372\|Ga0211683_10137649	Not Available	786	Open in IMG/M
3300020372\|Ga0211683_10214646	Not Available	611	Open in IMG/M
3300020376\|Ga0211682_10026608	All Organisms → Viruses → Predicted Viral	2356	Open in IMG/M
3300020376\|Ga0211682_10061927	All Organisms → Viruses → Predicted Viral	1513	Open in IMG/M
3300020376\|Ga0211682_10184331	Not Available	815	Open in IMG/M
3300020376\|Ga0211682_10186214	Not Available	810	Open in IMG/M
3300020376\|Ga0211682_10261462	Not Available	658	Open in IMG/M
3300020382\|Ga0211686_10005462	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	6118	Open in IMG/M
3300020382\|Ga0211686_10090217	All Organisms → Viruses → Predicted Viral	1250	Open in IMG/M
3300020382\|Ga0211686_10155489	Not Available	943	Open in IMG/M
3300020382\|Ga0211686_10379126	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	574	Open in IMG/M
3300020382\|Ga0211686_10404067	Not Available	552	Open in IMG/M
3300020396\|Ga0211687_10112601	Not Available	1144	Open in IMG/M
3300025138\|Ga0209634_1008346	Not Available	6428	Open in IMG/M
3300025138\|Ga0209634_1027385	All Organisms → Viruses → Predicted Viral	3070	Open in IMG/M
3300025138\|Ga0209634_1030859	All Organisms → Viruses → Predicted Viral	2839	Open in IMG/M
3300025138\|Ga0209634_1090436	All Organisms → Viruses → Predicted Viral	1380	Open in IMG/M
3300025138\|Ga0209634_1320012	Not Available	524	Open in IMG/M
3300025168\|Ga0209337_1123854	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300025276\|Ga0208814_1075081	Not Available	911	Open in IMG/M
3300025276\|Ga0208814_1144203	Not Available	542	Open in IMG/M
3300027522\|Ga0209384_1080574	Not Available	808	Open in IMG/M
3300027522\|Ga0209384_1135757	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	551	Open in IMG/M
3300027668\|Ga0209482_1007729	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	5467	Open in IMG/M
3300027668\|Ga0209482_1009477	All Organisms → Viruses → Predicted Viral	4769	Open in IMG/M
3300027668\|Ga0209482_1014792	All Organisms → cellular organisms → Bacteria → Proteobacteria	3576	Open in IMG/M
3300027668\|Ga0209482_1024693	Not Available	2524	Open in IMG/M
3300027668\|Ga0209482_1072141	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300027668\|Ga0209482_1078089	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1116	Open in IMG/M
3300027668\|Ga0209482_1108316	Not Available	878	Open in IMG/M
3300027672\|Ga0209383_1044135	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1713	Open in IMG/M
3300027672\|Ga0209383_1073342	All Organisms → Viruses → Predicted Viral	1207	Open in IMG/M
3300027672\|Ga0209383_1137134	Not Available	774	Open in IMG/M
3300027686\|Ga0209071_1009390	All Organisms → Viruses → Predicted Viral	3253	Open in IMG/M
3300027686\|Ga0209071_1009671	All Organisms → cellular organisms → Bacteria → Proteobacteria	3197	Open in IMG/M
3300027686\|Ga0209071_1013681	All Organisms → Viruses → Predicted Viral	2639	Open in IMG/M
3300027686\|Ga0209071_1030816	All Organisms → Viruses → Predicted Viral	1677	Open in IMG/M
3300027686\|Ga0209071_1198718	Not Available	560	Open in IMG/M
3300027704\|Ga0209816_1015842	All Organisms → Viruses → Predicted Viral	4168	Open in IMG/M
3300027704\|Ga0209816_1020082	All Organisms → Viruses → Predicted Viral	3562	Open in IMG/M
3300027704\|Ga0209816_1075662	All Organisms → Viruses → Predicted Viral	1395	Open in IMG/M
3300027704\|Ga0209816_1107115	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300027704\|Ga0209816_1121303	Not Available	981	Open in IMG/M
3300027779\|Ga0209709_10247176	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	794	Open in IMG/M
3300027788\|Ga0209711_10079142	All Organisms → Viruses → Predicted Viral	1715	Open in IMG/M
3300027788\|Ga0209711_10178396	Not Available	996	Open in IMG/M
3300027801\|Ga0209091_10509265	Not Available	521	Open in IMG/M
3300031510\|Ga0308010_1009646	All Organisms → Viruses → Predicted Viral	4370	Open in IMG/M
3300031510\|Ga0308010_1152538	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	861	Open in IMG/M
3300031510\|Ga0308010_1171781	Not Available	798	Open in IMG/M
3300031510\|Ga0308010_1295281	Not Available	557	Open in IMG/M
3300031519\|Ga0307488_10368063	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	900	Open in IMG/M
3300031519\|Ga0307488_10413655	Not Available	830	Open in IMG/M
3300031519\|Ga0307488_10481666	Not Available	746	Open in IMG/M
3300031598\|Ga0308019_10222334	Not Available	724	Open in IMG/M
3300031630\|Ga0308004_10200295	Not Available	812	Open in IMG/M
3300031659\|Ga0307986_10078263	All Organisms → Viruses → Predicted Viral	1648	Open in IMG/M
3300031695\|Ga0308016_10264414	Not Available	642	Open in IMG/M
3300031721\|Ga0308013_10241331	Not Available	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	74.11%
Oceanic	Environmental → Aquatic → Marine → Oceanic	23.21%
Coastal	Environmental → Aquatic → Marine → Coastal	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	74.11%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	23.21%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.68%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	66.07%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	21.43%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.04%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.68%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300020309	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX556064-ERR599104)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_100109494	3300001450	Marine	MINQLNEIDSSEKIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRHLVSEMSKALEVPEMSK*
JGI24006J15134_100183022	3300001450	Marine	MINQLNEIDSSKEIDAVEKHLLAQINQMQIPCKTNQMLEQLKDNQMLLLVTLMNEMRFTRHLVNEMAEALNE*
JGI24006J15134_101852382	3300001450	Marine	RDYIQNITTSFRDTIMINQLNEIDSSEKIDAIEQHLLAQINKMKIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRHLVKEVGDVLNEHS*
JGI24005J15628_101101902	3300001589	Marine	MINQLNEIDSSEKIDAIEQHLLAQINKMKIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRHLVKEVGDVLNEHS*
Ga0075441_100212102	3300006164	Marine	MINQLNELDSSKELDAVENHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE*
Ga0075441_100644272	3300006164	Marine	MINQLNEIESSKALDALEQHILAQMNRMDIPSKTNERLEQLKENQMLMFSTLINEMRFTRDFVKRMGDTLNE*
Ga0075441_100905553	3300006164	Marine	DTMMINQLNEIDSSEKIDALEQHLLTQINKMEIPCKTNEMLNQLKHNQMLLLKTMMNEIRFTRDLVKQMADALNE*
Ga0075441_101422361	3300006164	Marine	MINQLNELDSSKELIAVEQHILAQLNRMNIPSKTNERLEQLIENQHLMFITLMQEMRFTRDFVKRMGDTLNE*
Ga0075441_101675202	3300006164	Marine	IMINQLNEIDSSKALDALEQHILAQMNRMNIPSKTNERLDQLKENQMLMFKTLINEMRFTRNFVKQMGDTLNE*
Ga0075441_101704061	3300006164	Marine	MMQLNEIDSSEKIDAIEKHLLTQINKMQIPCKTNEMLEQLKENQMLLLTSLIHEIRFTRNLVQQMGDALEVTEMSK*
Ga0075443_103378013	3300006165	Marine	MMQLNELDSSKELDAVENHILGQINRMNLPAKTNERLEQLIENQHLMFITLMQEMRFTRDLVKQMGDALNE*
Ga0075446_100120302	3300006190	Marine	MINQLNELDSSKELDAVENHILAQLNRMKIPSKTNERLDQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE*
Ga0075446_100328313	3300006190	Marine	MMQLNEIDSSETIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLLLTTMMHEIRFTRNLVKQIGDTLNE*
Ga0075446_100446531	3300006190	Marine	IDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLLLTTLMNEMRFTRDLVNQMAVALDE*
Ga0075446_100540112	3300006190	Marine	MINQLNEIDSSEKIDAIEQHLLAQINRMQIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRNLVKEMGDALNE*
Ga0075446_100546841	3300006190	Marine	NELDSSKEIDALEKHLLAQLNRMNLPAKTNERLEQLKDNQMLMLITMMNEIRFTRDLVKQMGDALNE*
Ga0075446_100939002	3300006190	Marine	MNQLNEIDSSKELDALENHILAQMNKMHIPSKTNERLEQLIENQHLIFVTLMQEMRFTRDFVKRMGDTLNE*
Ga0075446_101032363	3300006190	Marine	MTTTNQLNEIDSSEKLDAVEKHLLAQILKMEIPCNTNMMLKQLKENQMLMFKTLINEMRF
Ga0075446_101561342	3300006190	Marine	MQLNEIDSSEKIDAIEKHLLTQINKMQIPCKTNEMLEQLKENQMLLLTSLIHEIRFTRNLVQQMGDALEVTEMSK*
Ga0075446_101735502	3300006190	Marine	QLNELDSSKELDAVENHILGQINRMNLPAKTNERLEQLIENQHLMFITLMQEMRFTRDLVKQMGDALNE*
Ga0075447_100059886	3300006191	Marine	MNFTKLMTTTNQLNEIDSSEKLDAVENHLLAQILKMEIPCNTNMMLKQLKENQMLMFKTLINEMRFTRHLVSEMDKALNAKE*
Ga0075447_100383375	3300006191	Marine	MINQLNEIDSSKEVDALEKHLLAQINKMNIPCKTNDMLEQLKDNQMLMLITLMNEMRFTRDFVKQMGDALNK*
Ga0075447_100396955	3300006191	Marine	MINQLNEIDSSKELDALEKHLLAQINKMNIPCNTNKMLEQLKENQMIMLTTLINEMRYTRDLVKQMGDTLNG*
Ga0075447_100495342	3300006191	Marine	MINQLNEIDSSKALDALEQHILAQMNRMNIPSKTNERLEQLKENQMLMFKTLINEMRFTRNFVKQMGDTLNE*
Ga0075447_100836152	3300006191	Marine	MMQLNELDSSKEIDALEQHLLAQLNRMNLPAKTNERLEQLKDNQMLMLITMMNEIRFTRDLVKQMGDALNE*
Ga0075447_100875531	3300006191	Marine	MINQLNELDSSKELIAVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFTRDFVKRMGDTLNE*
Ga0075447_100995412	3300006191	Marine	MMQLNEIDSSKEIDAIENHLLAQINQMQIPCKTNEMLNQLKHNQMLLLKTMMNEIRFTRDLVKQMADALNE*
Ga0075447_101083912	3300006191	Marine	MISELNEINSSEKLDDMEKHLLAQLNKMNLPAKTNERLEQLKENQYLMFITLIQEMRFTRGLVKQMAEALGE*
Ga0075447_101114693	3300006191	Marine	MMQLNEIDSSKEIDAIENHLLAMNNRMEIPCKTNEMLNQLKELNMLMLTTLINEMRFTRDLVKQMADALDK*
Ga0075447_103109971	3300006191	Marine	MMQLNELDSSKEIDALEKHLLAQLNRMNLPAKTNERLEQLKDNQMLMLITMMNEIRFTRDLVKQMGDA
Ga0075445_101636062	3300006193	Marine	MMQLNEIDSSKEIDALEQHLLAQLNKMNLPAKTNERLEQLKDNQMLMLMTMMNEIRFTRDLVKQMGDALNE*
Ga0075445_102098644	3300006193	Marine	MMQLNEIDSSEKIDAIEKHLLTQINKMQIPCKTNEMLEQLKENQMLLLTSLIHEIRFTRNLVQQ
Ga0075445_102399291	3300006193	Marine	MMQLNELDSSKELDAVENHILGQINRMNLPAKTNERLEQLIENQHLMFITLMQEMRFTRDFVKQMGDALNE*
Ga0075448_100365873	3300006352	Marine	MINQLNELDSSKELDAVEQHILAQLNRMKIPSKTNERLDQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE*
Ga0075448_100983041	3300006352	Marine	VDALEKHLLAQINKMNIPCKTNDMLEQLKDNQMLMLITLMNEMRFTRDFVKQMGDALNK*
Ga0075448_101156463	3300006352	Marine	MMQLNEIDSSKEIDAIENHLLAMNNRMEIPCKTNEMLNQLKELNMLMLTTLINEMRFTRDLVKQMGDALNE*
Ga0075444_100951032	3300006947	Marine	IMMQLNEIDSSKEIDAIENHLLAQINQMQIPCKTNEMLNQLKHNQMLLLKTMMNEIRFTRDLVKQMADALNE*
Ga0075444_102134171	3300006947	Marine	ELDSSKELDAVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE*
Ga0075444_102833041	3300006947	Marine	MINQLNELDSSKELDAVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFSR
Ga0075444_103798711	3300006947	Marine	SRDTIMINQLNEIESSKALDALEQHILAQMNRMDIPSKTNERLEQLKENQMLMFSTLINEMRFTRDFVKRMGDTLNE*
Ga0114995_101766364	3300009172	Marine	MINQLNEIDSSEKIDAIEQHLLAQIEKMKIPCKTNEMLEQLKENQMLLLTTLMNEMRFTRHLVKEMGDALNEHS*
Ga0114995_103987281	3300009172	Marine	MMQLNEIESSKEIDALEQHLRTQIEKMNIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRH
Ga0114993_104447592	3300009409	Marine	MINQLNEIDSSEKIDAIEQHLLAQIEKMKIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRHLVKEVGDVLNEHS*
Ga0114997_106530251	3300009425	Marine	MINQLNEIDSSKELDAIEQHLLAQIEKMNIPCKTNEMLNQLRDNQMLMLITLMNEMRFTRNFVKEMGDALNS*
Ga0115007_107010031	3300009441	Marine	MINQLNEIDSSKEIDAVEKHLLAQINQMQIPCKTNQMLEQLKDNQMLLLVTLMNEMRFTRHLVSDMADASNE*
Ga0115003_100698302	3300009512	Marine	QLNEIDSSEKIDAIEQHLLAQIEKMKIPCKTNEMLEQLKENQMLLLTTLMNEMRFTRHLVKEMGDALNEHS*
Ga0115000_107124683	3300009705	Marine	MMQLNEIESIKEIDALEQHLRNQIEKMNIPCKTNEMLEQLKENQMLLMITQMHEIRFTRNLVKEMSDALNE*
Ga0115001_101319483	3300009785	Marine	MMQLNEIESIKEIDALEQHLRTQIEKMNIPCKTNEMLEQLKENQMLLMITQMHEIRFTRNLVKEMSDALNE*
Ga0115001_107634062	3300009785	Marine	MINQLNEIDSSKELDAIEQHLLAQLEQMNIPCKTNQMLEQLKDNQMLMLITLMNEMRFTRNFVKEMGDALNS*
Ga0115001_108296221	3300009785	Marine	MINQLNEIDSSKELDAIEQHLLAQIEKMNIPCKTNEMLNQLRDNQMLMLITLMNEMRFTRNFVKEMGDALND*
Ga0211681_10173512	3300020309	Marine	MMQLNEIDSSETIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLLLTTMMHEIRFTRNLVKQMGDALNE
Ga0211683_100529321	3300020372	Marine	MMQLNEIDSSETIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLLLTTLMNEMRFTRDLVNQM
Ga0211683_100774021	3300020372	Marine	ELDSSKELDAVEQHILAQLNRMKIPSKTNERLDQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE
Ga0211683_101376491	3300020372	Marine	MNFTKLMTTTNQLNEIDSSEKLDAVENHLLAQILKMEIPCNTNMMLKQLKENQMLMFKTLINEMRFTRHLVSEMDKALNAKE
Ga0211683_102146461	3300020372	Marine	MISELNEINSSEKLDDMEKHLLAQLNKMNLPAKTNERLEQLKENQYLMFITLIQEMRFTRGLVKQMAEALGEXPLQQEKN
Ga0211682_100266083	3300020376	Marine	MTTTNQLNEIDSSEKLDAVENHLLAQILKMEIPCNTNMMLKQLKENQMLMFKTLINEMRFTRHLVSEMDKALNAKE
Ga0211682_100619272	3300020376	Marine	MINQLNEIESSKALDALEQHILAQMNRMDIPSKTNERLEQLKENQMLMFSTLINEMRFTRDFVKRMGDTLNE
Ga0211682_101843311	3300020376	Marine	MMQLNEIDSSETIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLLLTTMMHEIRFTRNLVKEMGDALNE
Ga0211682_101862141	3300020376	Marine	MMQLNEIDSSKEIDALEQHLLAQLNKMNLPAKTNERLEQLKDNQMLMLMTMMNEIRFTRDLVKQMGDALNE
Ga0211682_102614622	3300020376	Marine	MISELNEINSSEKLDDMEKHLLAQLNKMNLPAKTNERLEQLKENQYLMFITLIQEMRFTRGLVKQMAEALGE
Ga0211686_100054629	3300020382	Marine	MINQLNEIDSSEKIDAIEQHLLAQINRMQIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRNLVKEMGDALNE
Ga0211686_100902172	3300020382	Marine	MINQLNELDSSKELDAVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE
Ga0211686_101554891	3300020382	Marine	MMQLNELDSSKELDAVENHILGQINRMNLPAKTNERLEQLIENQHLMFITLMQEMRFTRDLVKQMGDALNE
Ga0211686_103791261	3300020382	Marine	TIMINQLNEIDSSKELDALEKHLLAQINKMNIPCNTNKMLEQLKENQMIMLTTLINEMRYTRDLVKQMGDTLNG
Ga0211686_104040671	3300020382	Marine	MINQLNEIDSSKEVDAIEKHLLAQINKMNIPCKTNDMLEQLKDNQMLMLITLMNEMRFTRDFVKQMGDALNK
Ga0211687_101126011	3300020396	Marine	MINQLNEIDSSKEIDAVEQHLLAQINKMQIPCKTNEMLEQLKDNQMLLLVTLMNEMRFTRHLVNEMAEALNEPT
Ga0209634_10083464	3300025138	Marine	MINQLNEIDSSEKIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRHLVSEMSKALEVPEMSK
Ga0209634_10273852	3300025138	Marine	MINQLNEIDSSEKIDAIEQHLLAQINKMKIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRHLVKEVGDVLNEHS
Ga0209634_10308593	3300025138	Marine	MINQLNEIDSSKEIDAVEKHLLAQINQMQIPCKTNQMLEQLKDNQMLLLVTLMNEMRFTRHLVSEMTDALNE
Ga0209634_10904361	3300025138	Marine	MINQLNEIDSSKELDAIEQHLLAQIEKMNIPCKTNEMLNQLRDNQMLMLITLMNEMRFTRNFVKEMGDALND
Ga0209634_13200121	3300025138	Marine	MINQLNEIDSSEKIDAIEQHLLAQIEKMKIPCKTNEMLEQLKENQMLLLTTLMNEMRFTRHLVKEMGDALNEHS
Ga0209337_11238542	3300025168	Marine	IDAVEKHLLAQINQMQIPCKTNQMLEQLKDNQMLLLVTLMNEMRFTRHLVNEMAEALNE
Ga0208814_10750811	3300025276	Deep Ocean	MINQLNELDSSKELIAVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFTRDFVKRMGDTLNE
Ga0208814_11442032	3300025276	Deep Ocean	MTTTNQLNEIDSSEKLDAVEKHLLAQILKMEIPCNTNMMLKQLKENQMLMFKTLINEMRFTRHLVSEM
Ga0209384_10805742	3300027522	Marine	MNQLNEIDSSKELDALENHILAQMNKMHIPSKTNERLEQLIENQHLIFVTLMQEMRFTRDFVKRMGDTLNE
Ga0209384_11357571	3300027522	Marine	TIMINQLNELDSSKELDAVENHILAQLNRMKIPSKTNERLDQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE
Ga0209482_10077299	3300027668	Marine	MMQLNEIDSSETIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLLLTTMMHEIRFTRNLVKQMGDTLNE
Ga0209482_10094775	3300027668	Marine	MINQLNEIDSSKELDALEKHLLAQINKMNIPCNTNKMLEQLKENQMIMLTTLINEMRYTRDLVKQMGDTLNG
Ga0209482_10147923	3300027668	Marine	MMQLNELDSSKEIDALEQHLLAQLNRMNLPAKTNERLEQLKDNQMLMLITMMNEIRFTRDLVKQMGDALNE
Ga0209482_10246931	3300027668	Marine	MMQLNELDSSKEIDALEKHLLAQLNRMNLPAKTNERLEQLKDNQMLMLITMMNEIRFTRDLVKQMGDALNE
Ga0209482_10721412	3300027668	Marine	MINQLNEIDSSKALDALEQHILAQMNRMNIPSKTNERLEQLKENQMLMFKTLINEMRFTRNFVKQMGDTLNE
Ga0209482_10780892	3300027668	Marine	ISRDTIMMQLNEIDSSEKIDAIEKHLLTQINKMQIPCKTNEMLEQLKENQMLLLTSLIHEIRFTRNLVQQMGDALEVTEMSK
Ga0209482_11083161	3300027668	Marine	MINQLNEIDSSKEIDAIENHLLAMNNRMEIPCKTNEMLNQLKELNMLMLTTLINEMRFTRDLVKQMADALDK
Ga0209383_10441354	3300027672	Marine	MMQLNEIDSSETIDAIEQHLLAQINKMQIPCKTNEMLEQLKENQMLLLTTMMHEIRFTRNLVKQIGDTLNE
Ga0209383_10733422	3300027672	Marine	MINQLNELDSSKELDAVEQHILAQLNRMKIPSKTNERLDQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE
Ga0209383_11371341	3300027672	Marine	TIERCXTRTIIRQTTRDDIENDAITYRDTIMINQLNEIDSSKEIDAIENHLLAMNNRMEIPCKTNEMLNQLKELNMLMLTTLINEMRFTRDLVKQMADALDK
Ga0209071_10093903	3300027686	Marine	ELDAVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFSRDFVKRIGDTLNE
Ga0209071_10096712	3300027686	Marine	MMNQLNEIDSSKEIDAIENHLLAQINKMNLPAKTNERLEQLKDNQMLMLITMMNEIRFTRDLVKQMGDALNE
Ga0209071_10136814	3300027686	Marine	TNRDTIMINQLNEIDSSEKIDAIEQHLLAQINRMQIPCKTNEMLEQLKENQMLMLTTLMNEMRFTRNLVKEMGDALNE
Ga0209071_10308162	3300027686	Marine	MVNQLNEIESSKALDALEQHILAQMNRMDIPSKTNERLEQLKENQMLMFSTLINEMRFTRDFVKRMGDTLNE
Ga0209071_11987181	3300027686	Marine	INSSEKLDDMEKHLLAQLNKMNLPAKTNERLEQLKENQYLMFITLIQEMRFTRGLVKQMAEALGE
Ga0209816_10158421	3300027704	Marine	NEIDSSKELDALEKHLLAQINKMNIPCNTNKMLEQLKENQMIMLTTLINEMRYTRDLVKQMGDTLNG
Ga0209816_10200823	3300027704	Marine	MINQLNELDSSKELIAVEQHILAQLNRMNIPSKTNERLEQLIENQHLMFITLMQEMRFTRDFVKRMGDTLNE
Ga0209816_10756621	3300027704	Marine	MISELNEINSSEKLDDMEKHLLAQLNKMNLPAKTNERLEQLKENQYLMFITLIQEMRFTRGLVKQM
Ga0209816_11071153	3300027704	Marine	NEIDSSKALDALEQHILAQMNRMNIPSKTNERLEQLKENQMLMFKTLINEMRFTRNFVKQMGDTLNE
Ga0209816_11213031	3300027704	Marine	SKEVDAIEKHLLAQINKMNIPCKTNDMLEQLKDNQMLMLITLMNEMRFTRDFVKQMGDALNK
Ga0209709_102471762	3300027779	Marine	MINQLNEIDSSKELDAIEQHLLAQIEKMKIPCKTNEMLEQLKENQMLLLTTLMNEMRFTRHLVKEMGDALNEHS
Ga0209711_100791421	3300027788	Marine	TPRDYIQNITTSFRDTIMINQLNEIDSSEKIDAIEQHLLAQINKMKIPCKTNEMLEQLKENQMLLLTTLMNEMRFTRHLVKEMGDALNEHS
Ga0209711_101783963	3300027788	Marine	MMQLNEIESSKEIDALEQHLRTQIEKMNIPCKTNEMLEQLKENQMLLMITQMHEIRFTRNLVKEMSDALNE
Ga0209091_105092653	3300027801	Marine	MMQLNEIESIKEIDALEQHLRTQIEKMNIPCKTNEMLEQLKENQMLLMITQMHEIRFTRNLVKEMSD
Ga0308010_10096461	3300031510	Marine	MINQLNELDSSKELDAVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFSRDFVK
Ga0308010_11525382	3300031510	Marine	AVEQHILAQLNRMKIPSKTNERLEQLIENQHLMFITLMQEMRFTRDFVKRMGDTLNE
Ga0308010_11717811	3300031510	Marine	MINQLNEIDSSKEIDAIENHLLAMNSRMEIPCKTNEMLNQLKELNMLMLTTLINEMRFTRDLVKQMADALDK
Ga0308010_12952812	3300031510	Marine	IMMQLNELDSSKELDAVENHILGQINRMNLPAKTNERLEQLIENQHLMFITMMQEMRFTRDFVKQMGDALNE
Ga0307488_103680632	3300031519	Sackhole Brine	IDSSKEIDAVEKHLLAQINQMQIPCKTNQMLEQLKDNQMLLLVTLMNEMRFTRHLVNEMAEALNE
Ga0307488_104136553	3300031519	Sackhole Brine	MINQLNEIDSSKEIDAVEKHLLAQINQMQIPCKTNQMLEQLKDNQMLLLVTLMNEMRF
Ga0307488_104816661	3300031519	Sackhole Brine	MNQLNEIDSTKELDAIEQHLLAQIEKMNIACKTNEMLEQLKDNQMLMLITLMNEMRFTRNFVKEMGDALNS
Ga0308019_102223341	3300031598	Marine	MQLNELDSSKELDAVENHILGQINRMNLPAKTNERLEQLIENQHLMFITLMQEMRFTRDLVKQMGDALNE
Ga0308004_102002952	3300031630	Marine	MINQLNEIDSSKEIDAIENHLLAMNNRMEIPCKTNEMLNQLKELNMLMLTTLINEMRFTRDLVKQMAVALDE
Ga0307986_100782631	3300031659	Marine	EIDSSKELDALENHILAQMNKMHIPSKTNERLEQLIENQHLIFVTLMQEMRFTRDFVKRMGDTLNE
Ga0308016_102644141	3300031695	Marine	MNFTKLMTTTNQLNEIDSSEKLDAVENHLLSQILKMEIPCNTNMMLKQLKENQMLMFKTLINEMRFTRHLVSEMDKALNAKE
Ga0308013_102413312	3300031721	Marine	MINQLNEIESSEALDSLEQHILAQMNRMNIPSKTNERLAQLIENQHLMFTTLINEMRFTRDFVKQMGDTLNE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084737

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences