NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084700

Metagenome / Metatranscriptome Family F084700

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084700
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 68 residues
Representative Sequence MTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVVVEDSVQRVYDQVNELMKKLAD
Number of Associated Samples 92
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 40.18 %
% of genes near scaffold ends (potentially truncated) 16.96 %
% of genes from short scaffolds (< 2000 bps) 69.64 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.179 % of family members)
Environment Ontology (ENVO) Unclassified
(30.357 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.393 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.
1MBSR1b_0826.00004300
22209916263
3JGI10216J12902_1035350112
4JGI10216J12902_1158064261
5P22013IDBA_1000095817
6Ga0055486_101023032
7Ga0062590_1019757322
8Ga0063356_1005740801
9Ga0063356_1051875671
10Ga0065715_103058851
11Ga0065707_100956794
12Ga0070658_101783821
13Ga0068869_1010109322
14Ga0070689_1001748261
15Ga0070689_1015066091
16Ga0070687_1000006233
17Ga0070700_1008720941
18Ga0070695_1010346972
19Ga0070702_1000512083
20Ga0074470_105320207
21Ga0082029_111104813
22Ga0079222_104416131
23Ga0075428_1002605162
24Ga0075421_10000036528
25Ga0075421_1001577222
26Ga0075425_10000383410
27Ga0079215_100335612
28Ga0079218_107200552
29Ga0079218_115608602
30Ga0079218_136179811
31Ga0105107_104928633
32Ga0111539_1000003348
33Ga0075418_107482242
34Ga0126313_112083162
35Ga0126310_106601482
36Ga0126310_106714441
37Ga0126310_114896331
38Ga0126311_104043882
39Ga0126311_108485802
40Ga0136847_136257662
41Ga0134127_120478081
42Ga0137333_11134012
43Ga0137441_10468482
44Ga0137448_10105963
45Ga0137448_11093231
46Ga0137430_12401411
47Ga0163163_109084952
48Ga0182000_100571392
49Ga0157377_100986453
50Ga0190266_105455802
51Ga0190265_102768443
52Ga0190272_1000000247
53Ga0190275_1000054926
54Ga0190269_100267813
55Ga0190268_101061252
56Ga0190268_111448182
57Ga0190270_1000002687
58Ga0190270_102649832
59Ga0190270_118927031
60Ga0190270_123489471
61Ga0190274_105006272
62Ga0193599_12033961
63Ga0190267_103019642
64Ga0196977_10000387
65Ga0196976_10010113
66Ga0196965_10619532
67Ga0196964_102204972
68Ga0196963_103610782
69Ga0196978_10152032
70Ga0196978_10231091
71Ga0213902_1058381
72Ga0213873_100000011118
73Ga0193698_10024602
74Ga0247791_10831861
75Ga0196960_100037543
76Ga0209640_101025772
77Ga0207662_1000132812
78Ga0207670_106981532
79Ga0207670_109642571
80Ga0207670_110613471
81Ga0207689_108156051
82Ga0207708_105318451
83Ga0214467_10330191
84Ga0209485_11608442
85Ga0207428_10000001104
86Ga0209382_1000051357
87Ga0209382_103066201
88Ga0247750_10098222
89Ga0272482_102594182
90Ga0268243_10375892
91Ga0247632_10041812
92Ga0307502_100266062
93Ga0307505_100009896
94Ga0307408_1020489622
95Ga0307468_1000009868
96Ga0307412_118220172
97Ga0307416_1004735922
98Ga0310890_114014282
99Ga0334942_001701_4611_4841
100Ga0334949_008772_1095_1268
101Ga0334956_000155_16526_16750
102Ga0334956_050609_172_366
103Ga0334963_000185_25666_25860
104Ga0334964_000024_53777_53998
105Ga0334925_000009_58647_58868
106Ga0370499_0018468_1053_1226
107Ga0334947_068659_281_475
108Ga0334931_042189_65_283
109Ga0334948_001252_4707_4934
110Ga0334948_002269_1101_1295
111Ga0334945_024792_293_511
112Ga0334935_000797_2560_2784
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.35%    β-sheet: 0.00%    Coil/Unstructured: 45.65%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045505560MTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVVVEDSVQRVYDQVNELMKKLADSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Freshwater Sediment
Natural And Restored Wetlands
Soil
Sediment (Intertidal)
Soil
Soil
Terrestrial Soil
Serpentine Soil
Switchgrass Rhizosphere
Termite Nest
Soil
Soil
Agricultural Soil
Soil
Sub-Biocrust Soil
Soil
Hardwood Forest Soil
Soil
Soil
Ore Pile And Mine Drainage Contaminated Soil
Untreated Peat Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Soil
Biocrust
Hypolithic Biocrust
Soil
Soil
Miscanthus Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
4.5%15.2%5.4%5.4%6.2%3.6%6.2%4.5%7.1%8.0%3.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0826.000043002162886012Miscanthus RhizosphereLVRVNDKLHYEIDATTAVHLPMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQSVYDQ
22099162632209111000SoilERVLDKLADILFATDEILDMIRVEERLPDATTVVVEDSVQRVYDQVNELMKKLAD
JGI10216J12902_10353501123300000956SoilMTAVHLPMSERVLDKLADILFATDEILDMIRIGERPPDATTVAVESSVQRVYDQVNELMKKLAD*
JGI10216J12902_11580642613300000956SoilMNKAQIEFDAVNAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVEMSVQKVYDEVNELMKKLVD*
P22013IDBA_10000958173300003315Ore Pile And Mine Drainage Contaminated SoilMTAMHLPMSERVLDRLADILLATDEILGMLRVPERLPDPITAEIETSVREVYDQVNELMKQLSD*
Ga0055486_1010230323300004071Natural And Restored WetlandsFDAMSAVHLPMSERVLDKLADILFATDEILDMIHVEDHLPDDTTAVVEESVQILYNQVNELMKKLSD*
Ga0062590_10197573223300004157SoilLLSRVNDKAAFEMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0063356_10057408013300004463Arabidopsis Thaliana RhizosphereMTSVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVAVESSVQHVYDQINELMK
Ga0063356_10518756713300004463Arabidopsis Thaliana RhizosphereVNEKITFEIDSTTAVHLPMSERVLDKLADIMLATDEILGMLRTPERVPDSTSVSVESSMQRVYEEVNELMKKLSD*
Ga0065715_1030588513300005293Miscanthus RhizosphereMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQSVYDQ
Ga0065707_1009567943300005295Switchgrass RhizosphereVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERAPDATTVVVESSVQRVYDQINELMKKLAD*
Ga0070658_1017838213300005327Corn RhizosphereMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVKRVYDQINELMKKLAD*
Ga0068869_10101093223300005334Miscanthus RhizosphereLVRVNDKVPFDFDAMTAVHLPMSERVLDKLADILFATDEILGMIQVEERLPDPTAVVVESSIRSVYEQVNELMKQLSD*
Ga0070689_10017482613300005340Switchgrass RhizosphereMSERVLDRLADILFASDEILDMIRVRERAPDATIVVVEESVQLVYDQVNELMKKLSD*
Ga0070689_10150660913300005340Switchgrass RhizosphereMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD*
Ga0070687_10000062333300005343Switchgrass RhizosphereVNYKAPIEFDAISAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVQRVYDQINDLMKKLAD*
Ga0070700_10087209413300005441Corn, Switchgrass And Miscanthus RhizosphereNRVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAY*
Ga0070695_10103469723300005545Corn, Switchgrass And Miscanthus RhizosphereMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0070702_10005120833300005615Corn, Switchgrass And Miscanthus RhizosphereVNQKVQPFEIDAIHAVHLPMSERVLDRLADILFATDEILDMVRVEERLPDPTAVVVEASMQRVYEQVNELMKQLAD*
Ga0074470_1053202073300005836Sediment (Intertidal)MSAVHLPMSERVLDKLADILFATDEILDMIRTEERLPDDRTVEVEASVQIMYNQVNELMMRLSD*
Ga0082029_1111048133300006169Termite NestMNKAHLEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEDSVQKVYDQVNELMKRLVD*
Ga0079222_1044161313300006755Agricultural SoilMTAVYLPMSERVLDKLADILFATDEILDMIRVEERIPDPTTAFVDRSVRAVYDQINELMKKLAD*
Ga0075428_10026051623300006844Populus RhizosphereVNYKASIEIDPVTALHLPMSERVLDKLADILFATDELLDMIRVEERLPDPTTVVVEDSVQRVYDQINELMKKLSD*
Ga0075421_100000365283300006845Populus RhizosphereMSERVLDKLADILFATDEILGLIRVEERMPDATTVFIETSVQSVYDQVNELMKRLAD*
Ga0075421_10015772223300006845Populus RhizosphereVNYKASIEFDPVTALHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTEVVEASVQHVYDQINELMKKLSD*
Ga0075425_100003834103300006854Populus RhizosphereVSYKLAEIDVMHAVHLPVSERVLDKLADILFATDEILDMLHVDEHMPDDTTVEVEQSVRVVYDQVNELMKKLCD*
Ga0079215_1003356123300006894Agricultural SoilMNKAPIEFDAVDAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVETSVQKVYDEVNELMQKLVD*
Ga0079218_1072005523300007004Agricultural SoilVNQKAYIEIDTTTAVHLPMSERVLDKLADILFATDEILGLIRVEERMPDATTVFIESSVQIVYDQVNELMKRLAD*
Ga0079218_1156086023300007004Agricultural SoilMDKLADILFATDEILDMIRVEERLPDATTVTVERSVQSVYDQINELMKKLAD*
Ga0079218_1361798113300007004Agricultural SoilMSAVHLPMSERVLDKLADIIFASDEILDMIRMEERLPDPTTVVVEASVKNVYDQINELMKKLAD*
Ga0105107_1049286333300009087Freshwater SedimentMSVHKSLLCRVNYKAPIEIDTTTAVHLPTSERVLDKLADILFATDEILGMVRMEERLPDATTVFIEESVQSVYNQVNELMKRLAD*
Ga0111539_10000033483300009094Populus RhizosphereMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD*
Ga0075418_1074822423300009100Populus RhizosphereLVRVNDKLHYEIDATTAVHLPMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQRVYDQVNELMKKLSD*
Ga0126313_1120831623300009840Serpentine SoilVNYKAHIEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAMVVGDSVQRVY
Ga0126310_1066014823300010044Serpentine SoilVNVKLQEFDVMTAVQLPISERVLDRLADILFATDEILDLLDRDEGFPIDTTVDVEKSVRDVYDQVNELMKKLAD*
Ga0126310_1067144413300010044Serpentine SoilRLADILFATDEILDLLDRDEGFPIDTTVDVEKSVRDVYDQVNELMKKLAD*
Ga0126310_1148963313300010044Serpentine SoilDATTAVHLPMSERVLDKLADILFATDEILGMLKIPERLPDSTSVVIESSVQSIYEQVNELMKKLSD*
Ga0126311_1040438823300010045Serpentine SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDPTAVVVEDSVQRVYDQINELMKKLVD*
Ga0126311_1084858023300010045Serpentine SoilVNQKATIEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEERVQQVYDQVNELMKRL
Ga0136847_1362576623300010391Freshwater SedimentVIVKLQEFDVMTAIQLPISERVLDRLADILFATDEILDMIDRDERSPSDTTLDVEKSVREVYDQVNELMKKLAD*
Ga0134127_1204780813300010399Terrestrial SoilVNDKAAFEMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0137333_111340123300011413SoilVNQKAYIEIDTTTAVHLPMSERVLDKLADILFATDEILGLIRVEERMPDATTVFVEESVQSVYDQVNELMKRLAD*
Ga0137441_104684823300011425SoilMSERVLDKLADILFATDEILDMIRVEERLPDPTTVAVESSVQGVYDQINELMKKLAD*
Ga0137448_101059633300011427SoilVNQKVQLFEIDAMHAIHLPMSERVLDKLADILFATDEILDMVRVEERLPDPTSVTVETSMQRVYEQVNELMKQLAD*
Ga0137448_110932313300011427SoilMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0137430_124014113300012041SoilVNYKAAFEMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0163163_1090849523300014325Switchgrass RhizosphereVNYKALAFDPITAVHLPVSERVLDKLADILFATDEILDMLKTDERYLNETTVAVGESVRSVYDQVNDLMKQLSD*
Ga0182000_1005713923300014487SoilVTYKAAIEFDAMTAVHLPMSERVLDKLADILFATDEILDIIRVEQRLPDETAVVVEKSVQSVYDQINALMKRLSD*
Ga0157377_1009864533300014745Miscanthus RhizosphereVNYKALTEIDAMTAVYLPMSERVLDKLADILFATDEILDMIRVEEQLPDPTAVVVGDSVQRVYDQINELMKKLAD*
Ga0190266_1054558023300017965SoilMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVTVGKSVQSVYDQINELMKKLAD
Ga0190265_1027684433300018422SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINDLMKKLAD
Ga0190272_10000002473300018429SoilVNEKVSYEIDATTAIHLPMSERVLDKLADILFATDEILGMVRPDEERMPDPSMASIETSMQSVYDQVNELMKRLSD
Ga0190275_10000549263300018432SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVVVEASVRHVYDQINELMKKLVD
Ga0190269_1002678133300018465SoilMTAVHLPMSERVLDKLADILFATDEILDMIKVEERMPDPTAVVVEDSVRSVYDQINELMKKLAD
Ga0190268_1010612523300018466SoilVNDKVPYEFDVTTAIHLPMSERVLDKLADILYATDEILGMVQTPERLPDASMTSVEMSMQRVYEQVNELMKQLSD
Ga0190268_1114481823300018466SoilMTAVHLPMSERVLDKLADILFATDELLDMIRVEERLPDATTEVVEASVQSVYDQINELMK
Ga0190270_10000026873300018469SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVVVEDSVQRVYDQINELMKKLVD
Ga0190270_1026498323300018469SoilMRAVHLPMSERVLDKLADILFATDEILDMIRVEERMPDATAVVVESSVQNVYDQINELMKKLAD
Ga0190270_1189270313300018469SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVECSVQGVYDQINELMKKLAD
Ga0190270_1234894713300018469SoilRVNDKALYEIDATTAIHLPMSERVLDKLADILFATDEILGMLRVPERLPDSTSVTIESSMQSVYDEVNELMKKLSD
Ga0190274_1050062723300018476SoilMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINELMKKLAD
Ga0193599_120339613300018946SoilTTALHLPVSERVLDKLADILLASDDILGMIRNEERLPDPTVAAVEDSVQHVYNQINELMKQLVD
Ga0190267_1030196423300019767SoilLRVGTSGYKSLLCRVNDKVPYEVDVTTAIHLPMSERVLDKLADILYATDEILGMVQTPERLPDASMTSVEMSMQRVYEQVNELMKQLSD
Ga0196977_100003873300020146SoilMTAVHLPMSERVLDKLADILFATDEILDMIRIGERPPDATTVVVESSVQRVYDQVNELMKKLAD
Ga0196976_100101133300020147SoilMSERVLDKLADILFATDEILGMLRVPERLPDSTSVVIEASVQSVYDEVNELMKKLSD
Ga0196965_106195323300020154SoilMTAVHLPMSERVLDKLADILFATDEILDMIKIEERLPDATTVVVEASVKSVYDQVNELMKKLAD
Ga0196964_1022049723300020202SoilVNHKAFTEIDTTTAVHLPTSERVLDKLADILFATDEILGMVRMEERMPDATTVFIEESVQSVYDQVNELMKRLSD
Ga0196963_1036107823300020215SoilVNQKAQIEIDTTTAVHLPTSERVLDKLADILFATDEILGIVRVEERMPDATTVFIEEAVQSVYDQVNELMKRLSD
Ga0196978_101520323300021067SoilVNDKVPFEIDATTAVHLPMSERVLDKLADILFATDEILGMLRVPERLPDSTSVVIEASVQSVYDEVNELMKKLSD
Ga0196978_102310913300021067SoilRVLDKLADILFATDEILDMIRVEERLPDPTTVAVETSVQRLYDQVNELMKKLAD
Ga0213902_10583813300021290SoilVKLQEFDVMTAVQLPISERVLDRLADILFATDEILDMLDRDEGYPIDTTVDVGKSVRNVYDQVNELMKKLAD
Ga0213873_1000000111183300021358RhizosphereMSERVLDKLADILFATDEILDMLHVDEDRVPDDTSVVVEASVKHVYDQVNELMKKLTD
Ga0193698_100246023300021968SoilMHTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINELMKKLAD
Ga0247791_108318613300023062SoilIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEEQLPDPTAQVVGASVQQVYDQINELMKKLAD
Ga0196960_1000375433300024426SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDPTAMAVGDSVQQVYDQINELMKKLAD
Ga0209640_1010257723300025324SoilMQAIHLPMSERVLDKLADILFATDEILDMVRVEERLPDPTSVVVETSMQRVYEQVNELMKQLAD
Ga0207662_10001328123300025918Switchgrass RhizosphereMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVQRVYDQINDLMKKLAD
Ga0207670_1069815323300025936Switchgrass RhizosphereMSERVLDRLADILFASDEILDMIRVRERAPDATIVVVEESVQLVYDQVNELMKKLSD
Ga0207670_1096425713300025936Switchgrass RhizosphereVNDKVPFDFDAMTAVHLPMSERVLDKLADILFATDEILGMIRVEEKLPDPTTVAVESSMQSVYEQVNELMKQLSD
Ga0207670_1106134713300025936Switchgrass RhizosphereMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVKRVYDQINELMKKLAD
Ga0207689_1081560513300025942Miscanthus RhizosphereMSERVLDKLADILFATDEILGMIQVEERLPDPTAVVVESSIRSVYEQVNELMKQLSD
Ga0207708_1053184513300026075Corn, Switchgrass And Miscanthus RhizosphereNRVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVADESSVQGVYDQINELMKKLAD
Ga0214467_103301913300027075SoilVNYKAPIEIDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERPPDATAAVVQGAVQNVYDQVNELMKKLAD
Ga0209485_116084423300027691Agricultural SoilMNKAPIEFDAVDAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVETSVQKVYDEVNELMQKLVD
Ga0207428_100000011043300027907Populus RhizosphereMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD
Ga0209382_10000513573300027909Populus RhizosphereMSERVLDKLADILFATDEILGLIRVEERMPDATTVFIETSVQSVYDQVNELMKRLAD
Ga0209382_1030662013300027909Populus RhizosphereVNYKASIEFDPVTALHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTEVVEASVQHVYDQINELMKKLSD
Ga0247750_100982223300027992SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAAVVGDSVQRVYDQINELMKKLAD
Ga0272482_1025941823300028578SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEDRLLDPTTVVVEESVQAVYDQVNELMKKLVD
Ga0268243_103758923300030510SoilMTAVHLPMSERVLDKLADILFATDEILDIIRVEQRLPDETAVVVEKSVQSVYDQINALMKRLSD
Ga0247632_100418123300030533SoilMNKAPIEFDAMSAVHLPISERVLDKLADILFATDEILDMIRVEERVLDHTSVVVETSVQKVYDQVNELMKRLVD
Ga0307502_1002660623300031164SoilMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVTVASSVQSVYDQINELMKKLAD
Ga0307505_1000098963300031455SoilMTAVHIPMSERVLDKLADILYATDELLSLVRVEERLPDSTTRVVEQSMQRVYEQINELMKRFSD
Ga0307408_10204896223300031548RhizosphereMNKALLEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLFDPTTVVVESSVQQVYDQVNELMKKLVD
Ga0307468_10000098683300031740Hardwood Forest SoilVKPQEFDAMTAIQLPISERVLDRLADILFATDEILDMINRNERVPDDTTLDVEQSVRMVYDQVNELMKKLAD
Ga0307412_1182201723300031911RhizosphereMNAAHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEESVQQVYDQVNELMKKLVD
Ga0307416_10047359223300032002RhizosphereMTAVHLPMSERVLDKLADILFATDEILGLVCPEERMPDETAVVVEESMRRVYDQINDLMKRLSD
Ga0310890_1140142823300032075SoilLSRVNAKAAIEFDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATAVVVESSVQNVYDQINELMKKLAD
Ga0334942_001701_4611_48413300034008BiocrustVNDKVPYEIDATTAIHLPMSERVLDRLADILLATDEILGMVRPDEERMPDPSMATVETSIQSVYDQVNELMKQLSD
Ga0334949_008772_1095_12683300034027BiocrustMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVEDSVQRVYDQINELMKKLAD
Ga0334956_000155_16526_167503300034139BiocrustVHKTILQFDPMTAIQLPLSERVLDRLADILFATDEILDMIHMDEVLPDSTTQEVEASVRHVYDRVNELMKKLAD
Ga0334956_050609_172_3663300034139BiocrustMTAVHLPMSERVLDKLADILFATDEILDMIRVEERAPDPTTVVVEDSVQRVYDQINELMKKLAD
Ga0334963_000185_25666_258603300034145Sub-Biocrust SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVVVEDSVQRVYDQVNELMKKLAD
Ga0334964_000024_53777_539983300034146Sub-Biocrust SoilVKYQALEFDAMTAVHLPMSERVLDKLADILFATDEILDMLQMEEQLPSPASSVEESVRSVYDQVNELMKQLAD
Ga0334925_000009_58647_588683300034173Hypolithic BiocrustMKALEFDAMTAVHLPMSERVLDKLADILFATDEILDMLRLQEERLPDDTTTAVEESVKHVYEQVNELMKKLTD
Ga0370499_0018468_1053_12263300034194Untreated Peat SoilMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD
Ga0334947_068659_281_4753300034251Sub-Biocrust SoilMNAVHLPLSERVLDRLADILFASDEILDMIQTVDRFPDDTTQDVQRSVRGVYDQVNELMKKLAD
Ga0334931_042189_65_2833300034377Sub-Biocrust SoilMAATEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDRTAVVVQDSVKRVYDQVNELMKKLAD
Ga0334948_001252_4707_49343300034760Sub-Biocrust SoilVKEQIPFEIDATTAIHLPMSERVLDKLADILFATDEILGMLRVPERLPDATSVTIEMSVQSVYNEVNELMKKLSD
Ga0334948_002269_1101_12953300034760Sub-Biocrust SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDATAVVVGDSVQRVYDQINELMKKLAD
Ga0334945_024792_293_5113300034779Sub-Biocrust SoilMAATEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDRTAVVVHDSVKRVYDQVNELMKKLAD
Ga0334935_000797_2560_27843300034781BiocrustVNYKSLETDVMTAVHLPMSERVLDKLADILFATDEILDMIKVEDRLPDPTAVVVGDSVRHVYEQINELMKKLAD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.