Metagenome Family F084698

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084698
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	78 residues
Representative Sequence	VKEAIAMLAVQTGGTTMRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVSSRAYDIEYATV
Number of Associated Samples	45
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.82 %
% of genes near scaffold ends (potentially truncated)	18.75 %
% of genes from short scaffolds (< 2000 bps)	76.79 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (43.750 % of family members)
Environment Ontology (ENVO)	Unclassified (44.643 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.357 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.36% β-sheet: 12.26% Coil/Unstructured: 60.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07690	MFS_1	16.07
PF01553	Acyltransferase	6.25
PF01494	FAD_binding_3	5.36
PF03631	Virul_fac_BrkB	5.36
PF06348	DUF1059	4.46
PF00072	Response_reg	2.68
PF06224	HTH_42	1.79
PF10576	EndIII_4Fe-2S	1.79
PF03793	PASTA	0.89
PF01915	Glyco_hydro_3_C	0.89
PF03006	HlyIII	0.89
PF13231	PMT_2	0.89
PF04551	GcpE	0.89
PF00211	Guanylate_cyc	0.89
PF03404	Mo-co_dimer	0.89
PF00486	Trans_reg_C	0.89
PF13586	DDE_Tnp_1_2	0.89
PF09362	DUF1996	0.89
PF11746	DUF3303	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	10.71
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	5.36
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	5.36
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	5.36
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	5.36
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	1.79
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	0.89
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.89
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.11 %
Unclassified	root	N/A	25.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.11 %
Unclassified	root	N/A	25.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.11 %
Unclassified	root	N/A	25.89 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.68 %
Unclassified	root	N/A	25.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.04 %
Unclassified	root	N/A	25.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	24.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	24.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	24.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	9.82 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	6.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.68 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.89 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	6.25 %
Rubrobacter tropicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	2.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.68 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	1.79 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	1.79 %
Rubrobacter taiwanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter taiwanensis	1.79 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_18649173	Not Available	628	Open in IMG/M
3300002568\|C688J35102_120922910	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300003373\|JGI25407J50210_10083395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300005562\|Ga0058697_10124477	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1098	Open in IMG/M
3300005562\|Ga0058697_10537559	Not Available	602	Open in IMG/M
3300005562\|Ga0058697_10715979	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005981\|Ga0081538_10006695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	10093	Open in IMG/M
3300006169\|Ga0082029_1247683	Not Available	892	Open in IMG/M
3300006876\|Ga0079217_10800271	All Organisms → cellular organisms → Bacteria → Terrabacteria group	654	Open in IMG/M
3300006894\|Ga0079215_10013241	All Organisms → cellular organisms → Bacteria	2583	Open in IMG/M
3300006918\|Ga0079216_10631173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	746	Open in IMG/M
3300007790\|Ga0105679_10313196	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300007790\|Ga0105679_10342819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300007790\|Ga0105679_10362079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	4668	Open in IMG/M
3300007790\|Ga0105679_10517269	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300007790\|Ga0105679_10605779	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2034	Open in IMG/M
3300007790\|Ga0105679_10812910	Not Available	1023	Open in IMG/M
3300007790\|Ga0105679_10925129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1853	Open in IMG/M
3300009789\|Ga0126307_10002899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	11660	Open in IMG/M
3300009789\|Ga0126307_10078919	All Organisms → cellular organisms → Bacteria	2597	Open in IMG/M
3300009789\|Ga0126307_10161931	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300009789\|Ga0126307_10199884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1604	Open in IMG/M
3300009789\|Ga0126307_10244672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1442	Open in IMG/M
3300009789\|Ga0126307_10305487	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1280	Open in IMG/M
3300009789\|Ga0126307_10339551	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300009789\|Ga0126307_10406605	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1098	Open in IMG/M
3300009789\|Ga0126307_10669794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	837	Open in IMG/M
3300009789\|Ga0126307_10966584	Not Available	688	Open in IMG/M
3300009789\|Ga0126307_11772987	Not Available	502	Open in IMG/M
3300009840\|Ga0126313_10011064	All Organisms → cellular organisms → Bacteria	5695	Open in IMG/M
3300009840\|Ga0126313_10020607	All Organisms → cellular organisms → Bacteria	4381	Open in IMG/M
3300009840\|Ga0126313_10030215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3704	Open in IMG/M
3300009840\|Ga0126313_10540094	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300009840\|Ga0126313_11148026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300009840\|Ga0126313_11693794	Not Available	528	Open in IMG/M
3300010036\|Ga0126305_10123163	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300010036\|Ga0126305_10150248	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300010036\|Ga0126305_10379648	Not Available	929	Open in IMG/M
3300010036\|Ga0126305_10416410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	888	Open in IMG/M
3300010036\|Ga0126305_10490849	Not Available	818	Open in IMG/M
3300010037\|Ga0126304_10032356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3083	Open in IMG/M
3300010037\|Ga0126304_10161639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1454	Open in IMG/M
3300010037\|Ga0126304_10217476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter tropicus	1252	Open in IMG/M
3300010037\|Ga0126304_10219397	Not Available	1246	Open in IMG/M
3300010037\|Ga0126304_10713672	All Organisms → cellular organisms → Bacteria → Terrabacteria group	678	Open in IMG/M
3300010038\|Ga0126315_10000837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11177	Open in IMG/M
3300010038\|Ga0126315_10144757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1403	Open in IMG/M
3300010038\|Ga0126315_10345645	Not Available	926	Open in IMG/M
3300010039\|Ga0126309_10005950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	4756	Open in IMG/M
3300010039\|Ga0126309_10018455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3012	Open in IMG/M
3300010039\|Ga0126309_10029176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2493	Open in IMG/M
3300010039\|Ga0126309_10060367	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300010039\|Ga0126309_10093674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1533	Open in IMG/M
3300010039\|Ga0126309_10618982	All Organisms → cellular organisms → Bacteria → Terrabacteria group	684	Open in IMG/M
3300010041\|Ga0126312_10209278	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300010041\|Ga0126312_10215544	Not Available	1344	Open in IMG/M
3300010041\|Ga0126312_10257337	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1227	Open in IMG/M
3300010042\|Ga0126314_10047765	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300010042\|Ga0126314_10065226	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300010042\|Ga0126314_10572746	Not Available	823	Open in IMG/M
3300010042\|Ga0126314_10892219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	657	Open in IMG/M
3300010044\|Ga0126310_10204438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter taiwanensis	1301	Open in IMG/M
3300010044\|Ga0126310_10288285	Not Available	1125	Open in IMG/M
3300010044\|Ga0126310_10648734	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300010045\|Ga0126311_10081382	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300010045\|Ga0126311_11446217	Not Available	575	Open in IMG/M
3300014487\|Ga0182000_10615341	Not Available	526	Open in IMG/M
3300014488\|Ga0182001_10108428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	876	Open in IMG/M
3300017965\|Ga0190266_11091419	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300018432\|Ga0190275_10010058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	6968	Open in IMG/M
3300018432\|Ga0190275_10020369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	5136	Open in IMG/M
3300018432\|Ga0190275_10035817	All Organisms → cellular organisms → Bacteria	4028	Open in IMG/M
3300018432\|Ga0190275_10689017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1078	Open in IMG/M
3300018465\|Ga0190269_10102781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter taiwanensis	1403	Open in IMG/M
3300018465\|Ga0190269_10392550	All Organisms → cellular organisms → Bacteria → Terrabacteria group	855	Open in IMG/M
3300018465\|Ga0190269_11142710	All Organisms → cellular organisms → Bacteria → Terrabacteria group	605	Open in IMG/M
3300018466\|Ga0190268_10010638	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300018466\|Ga0190268_10040282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1758	Open in IMG/M
3300018466\|Ga0190268_10202973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1084	Open in IMG/M
3300018466\|Ga0190268_10686404	Not Available	748	Open in IMG/M
3300018466\|Ga0190268_10794016	All Organisms → cellular organisms → Bacteria → Terrabacteria group	715	Open in IMG/M
3300018920\|Ga0190273_10460442	Not Available	916	Open in IMG/M
3300019377\|Ga0190264_10073845	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1487	Open in IMG/M
3300019377\|Ga0190264_10106002	Not Available	1334	Open in IMG/M
3300019767\|Ga0190267_10459251	Not Available	736	Open in IMG/M
3300019767\|Ga0190267_10582047	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300019767\|Ga0190267_10826255	Not Available	621	Open in IMG/M
3300027809\|Ga0209574_10095526	Not Available	837	Open in IMG/M
3300028705\|Ga0307276_10038028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1027	Open in IMG/M
3300028705\|Ga0307276_10089659	Not Available	732	Open in IMG/M
3300028744\|Ga0307318_10026158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1890	Open in IMG/M
3300028754\|Ga0307297_10005772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3100	Open in IMG/M
3300028754\|Ga0307297_10111344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	908	Open in IMG/M
3300028782\|Ga0307306_10223324	Not Available	545	Open in IMG/M
3300028881\|Ga0307277_10039932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1892	Open in IMG/M
3300030496\|Ga0268240_10130442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	608	Open in IMG/M
3300030513\|Ga0268242_1085004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	640	Open in IMG/M
3300032159\|Ga0268251_10115210	All Organisms → cellular organisms → Bacteria → Terrabacteria group	976	Open in IMG/M
3300032159\|Ga0268251_10426236	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300032159\|Ga0268251_10594946	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300032159\|Ga0268251_10595200	Not Available	508	Open in IMG/M
3300032159\|Ga0268251_10615061	Not Available	501	Open in IMG/M
3300034005\|Ga0334930_029529	All Organisms → cellular organisms → Bacteria → Terrabacteria group	884	Open in IMG/M
3300034007\|Ga0334936_016068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1615	Open in IMG/M
3300034007\|Ga0334936_104656	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300034131\|Ga0334911_027178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	799	Open in IMG/M
3300034132\|Ga0334915_145544	Not Available	505	Open in IMG/M
3300034221\|Ga0334937_039234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1280	Open in IMG/M
3300034391\|Ga0334917_008441	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1507	Open in IMG/M
3300034391\|Ga0334917_023076	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1030	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.18%
Host-Associated	Host-Associated	9.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.18%
Plants	Host-Associated → Plants	9.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.18%
Phylloplane	Host-Associated → Plants → Phylloplane	8.04%
Roots	Host-Associated → Plants → Roots	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.89%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	8.04%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	6.25%
Sand	Environmental → Terrestrial → Soil → Sand	6.25%
Loam	Environmental → Terrestrial → Soil → Loam	1.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	71.43%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	8.04%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	6.25%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	6.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.79%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	43.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.21%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	8.04%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	2.68%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.79%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_186491732	3300000550	Soil	MRAVQEGGATMRAVRCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRGIVFSRAYDIEYATA*
C688J35102_1209229103	3300002568	Soil	MRAVQKGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATV*
JGI25407J50210_100833952	3300003373	Tabebuia Heterophylla Rhizosphere	MLAVQAGGATIRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPVRVERVRKIVSSCAYDIEYARV*
Ga0058697_101244772	3300005562	Agave	VKEVMAMQAMREGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0058697_105375591	3300005562	Agave	MQAVQERRATMRAVLCASLCNCRHTLRADGEERLVEVALEHLRQQHPAAPLVEARVRRIVHTRAYDIEYATV*
Ga0058697_107159792	3300005562	Agave	LSKVEKSGISAPTEEEMNMRAVQKGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATV*
Ga0081538_100066953	3300005981	Tabebuia Heterophylla Rhizosphere	MRSSLQEAKLLSRSGEEYATPVKEAMAMRAIQEGEATMRAVLCASVCNCRHTLRAYGDEGLVEVALEHLRRNHPAAPLGEERVRRIVLSCAYDIEYARV*
Ga0082029_12476832	3300006169	Termite Nest	MYLRNVTRCGVTALLTEEEMAVQDVQNEGATMRAVLCASLCNCRHTLRADGDERLAEVALEHLRDNHPAAPLEEERVRKIVSSRAYGIDYART*
Ga0079217_108002712	3300006876	Agricultural Soil	VKEAMAMRAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYERV*
Ga0079215_100132412	3300006894	Agricultural Soil	VKEAMAMRAMQEGEDTMRAVLCASVCNCRHTLRADGDEGLIEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0079216_106311732	3300006918	Agricultural Soil	VKEAMAMRAVQEGEAAMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRHNHPAAPLGEERVRRIVLSCAYDIEYARV*
Ga0105679_103131961	3300007790	Soil	MQAVQERRATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKHNHPAAPVVEDRVRRVVFSRAYDIEYATV*
Ga0105679_103428192	3300007790	Soil	MVMLTVQSGGTTLRAMLCASVCNCRHTLRAASDEGLVEVALEHLRHNHPAAPLGEERIRKIVSRRAFDIEYATV*
Ga0105679_103620796	3300007790	Soil	MNMQAVQTRKATMRAVLCASLCNCRHTLRAEGDERLVDVALEHLRHNHPAAPLREERVRRIVLSCAYDIEYTTM*
Ga0105679_105172692	3300007790	Soil	VTRSGIPALTEEEIAMRAVQKGGATMRAVLCASMCNCRHTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYAAV*
Ga0105679_106057794	3300007790	Soil	VKEAIAMLAVQTGGATTRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVSSHAYDIEYAGV*
Ga0105679_108129102	3300007790	Soil	VTRSGIAAPIEEEMDMRAVQKGRDTMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATA*
Ga0105679_109251292	3300007790	Soil	VKEAIAMLAVQTGGTTMRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVSSRAYDIEYATV*
Ga0126307_100028998	3300009789	Serpentine Soil	VKEAIAMLAVQTGGTTTRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVSSRAYDIEYAGV*
Ga0126307_100789194	3300009789	Serpentine Soil	MEEATNMQAVQTRRATMRAVLCAPLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLREERVRRIVFSRAYDIEYAAV*
Ga0126307_101619314	3300009789	Serpentine Soil	VKEAMAMQAVQRGGAKMRAVLCASLCNCRHTLRADGDERLVEAALEHLRRNHPAAPLREERVRTIVYSRAYDIEYATV*
Ga0126307_101998842	3300009789	Serpentine Soil	VKEAMAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLREERVRRIVLSCAYDIEYARV*
Ga0126307_102446722	3300009789	Serpentine Soil	VKEAMAMRAMQKGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0126307_103054872	3300009789	Serpentine Soil	VKEAMAMRAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEATLEHLRRNHPVAPLGEERVRLIVLSCAYDIEYARV*
Ga0126307_103395512	3300009789	Serpentine Soil	MTRSEIHAQVKEAMDMLAVQNGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKDNHPAAPLREERVRRIVSTRAFDIEYATV*
Ga0126307_104066051	3300009789	Serpentine Soil	MAMGAMQEGEATVRAVLCASVCNCRYTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0126307_106697941	3300009789	Serpentine Soil	VTRSGVSALEKEAMAMQVVQRGGDTMRAVLCASMCNCRHTLRAEGDERLVETALEHLRRNHPAAPLREERIRKIVYSRAYDIEYVTL*
Ga0126307_109665841	3300009789	Serpentine Soil	VIRSGIPALIEEEMNMLAVQERRATMRAVLCASLCNCRHTLRAEDDEGLVEVALEHLRHNHPAAPLQRERVRRIVLSRAYDIEYATV*
Ga0126307_117729872	3300009789	Serpentine Soil	VTRSGVSALVKEAMVMQAVQRGGATTRAVLCASLCNCRHTLRADGDEGLVEVALEHLRHNHPAAPLREERIRKIVSSRAYDIEYDTV*
Ga0126313_100110644	3300009840	Serpentine Soil	MRAVLCASVCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRWIVIRRAYDIEYATV*
Ga0126313_100206076	3300009840	Serpentine Soil	LKEAMAMQAVQRGGAKMRAVLCASLCNCRHTLRADGDERLVETALEHLRRNHPAAPLREERVRRIVYRRAYDIEYATV*
Ga0126313_100302156	3300009840	Serpentine Soil	VKEAMAMQAVQRGGAKMRAVLCASLCNCRHTLRADGDERLVETALEHLRRNHPAAPLREERVRKIVYSRAYDIEFATA*
Ga0126313_105400942	3300009840	Serpentine Soil	MEEAMIMQAVQNGGATMRAVLCGSLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRRIVFSRAYDIEHTAV*
Ga0126313_111480261	3300009840	Serpentine Soil	VTRSGVSALVKEAMVMQAVQRGGATTRAVLCASLCNCRHTLRADGDEGLVEVALEHLRHNHPAAPLREERVRKIVSSRAYDIEYDTV*
Ga0126313_116937941	3300009840	Serpentine Soil	VTRSEVNAQEKEAMAMLAVQTGGGATMRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERIRRIVFSRAYDIEYATA*
Ga0126305_101231632	3300010036	Serpentine Soil	VTRSEVNAQEKEAMAMLAVQNGGATMRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERIRRIVFSRAYDIEYATA*
Ga0126305_101502483	3300010036	Serpentine Soil	TRNGIYDLMEEATNMQAVQTRRATMRAVLCAPLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLREERVRRIVFSRAYDIEYAAV*
Ga0126305_103796483	3300010036	Serpentine Soil	LTVQEGGATMRAVLCASLCNCRHTLRAEDDEGLVEVALEHLRHNHPAAPLQRERVRRIVLSRAYDIEYATV*
Ga0126305_104164102	3300010036	Serpentine Soil	VTRSGVSALEKEAMAMQVVQRGGDTMRAVLCASMCNCRHTLRAEGDERLVETALEHLRRNHPAAPLREERIRKIVYSRAYDIEYVTV*
Ga0126305_104908491	3300010036	Serpentine Soil	VTRSGKSAQIEEAIIMQAVQERRATMRAVLCASLCNCRHTLRADGDERLVEVALEHLRQQHPAAPLVEERVRRIIFTRAYDIEYATV*
Ga0126304_100323565	3300010037	Serpentine Soil	MTRSEIHAQVKEAMDMLAVQNGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKDNHPAAPLREERVRRIVSTHAFDIEYATV*
Ga0126304_101616392	3300010037	Serpentine Soil	VKEAMAMQEREATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLREERVRRIVLSCAYDIEYARV*
Ga0126304_102174762	3300010037	Serpentine Soil	VKEAMAMQAVQRGGAKMRAVLCASLCNCRHTLRADGDERLVETALEHLRRNHPAAPLREERVRKIVYSRAYDIEFATV*
Ga0126304_102193972	3300010037	Serpentine Soil	MRVMYSRDVIRSGVSALVKEEMAVQAVQKEGATTRAVLCASLCNCRHTLRADGDERLVEVALEHLRDNHPAAPLEEERVRRIVFSRAYGIEYARS*
Ga0126304_107136721	3300010037	Serpentine Soil	GEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0126315_100008372	3300010038	Serpentine Soil	VKEAMAMRAVQKGGATMRAVLCASLCNCRHTLRADGDEGLVEVALEHLRDNHPAAPLGEERVRRIVLSRAYDIEYARV*
Ga0126315_101447572	3300010038	Serpentine Soil	VKEAMAMRAMQEGEATMRAVLCASVCNCRHTLRADGDERLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0126315_103456453	3300010038	Serpentine Soil	VIRSEVYALVKEAMTMLTVQEGGATMRAVLCASLCNCRHTLRANGDEELVEVALEHLRHNHPAAPLMEERIK
Ga0126309_100059505	3300010039	Serpentine Soil	VTRSGKSAQEEEAIIMQAVQERRATMRAVLCASLCNCRHTLRADGDERLVEVALEHLRQQHPAAPLVEARVRRIVHTRAYDIEYATV*
Ga0126309_100184553	3300010039	Serpentine Soil	VKEAMAMQAVQRGEATTRAVLCASLCNCRHTLRADGDEGLVEVALEHLRHNHPAAPLREERVRKIVFSRAYDIEYATA*
Ga0126309_100291763	3300010039	Serpentine Soil	VEWSGASAQIEEAMTMLAVQEGGATTRAVLCASLCNCRHTLRADGDERLVEVALEHLRQQHPAAPLVEARVRRIVYSRAYDIEYATV*
Ga0126309_100603673	3300010039	Serpentine Soil	VKEAIAMLAVQTGGTTTRAVLCASLCNCRHTLRADGDERLVEVALEHLRYNHPAAPLGEERVRRIVSSRAYDIEYAKV*
Ga0126309_100936742	3300010039	Serpentine Soil	VKVAMDMRSVHKGGASMRAVLCASVCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRWIVIRRAYDIEYATV*
Ga0126309_106189822	3300010039	Serpentine Soil	VGLSYFRDVTRSGIPALTEEEMDMRAVQKGGATMRAVLCASLCNCRYTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATV*
Ga0126312_102092781	3300010041	Serpentine Soil	CAPRYKRLSCFCNVTRGRVSALVKEAMAMQAVQRGEATTRAVLCASLCNCRHTLRADGDEGLVEVALEHLRHNHPAAPLREERVRKIVFSRAYDIEYATA*
Ga0126312_102155442	3300010041	Serpentine Soil	VIRSEVYALVKEAMTMLTVQEGGATMRAVLCASLCNCRHTLRANGDEELVEVALEHLRHNHPAAPLMEERIKNIVFTRAYDIEYATV*
Ga0126312_102573372	3300010041	Serpentine Soil	VKEAMAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0126314_100477655	3300010042	Serpentine Soil	VIRSGIPALIEEEINMLAVQERRATMRAVLCASLCNCRHTLRAEDDEGLVEVALEHLRHNHPAAPLQRERVRRIVLSRAYDIEYATV*
Ga0126314_100652264	3300010042	Serpentine Soil	MEEAMIMQAVQNGGATMRAVLCGSLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERFRRIVFSRAYDIEHTAV*
Ga0126314_105727461	3300010042	Serpentine Soil	MRSSLQEAKLLLRRGEGFETPVKEAMAMREGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV*
Ga0126314_108922191	3300010042	Serpentine Soil	VTRSGIPALIEEEMNMLAVQKGGATMRAVLCASLCNCRHTLRAEGNERLVEVALEHLRHNHPAAPLVEERVRGIVFSRAYDIEYAAV*
Ga0126310_102044382	3300010044	Serpentine Soil	VKEAIAMLAVQTGGTTTRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVSSHAYDIEYAGV*
Ga0126310_102882852	3300010044	Serpentine Soil	VKVAMDMRSVHKGGASMRAVLCASVCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVIRRAYDIEYATV*
Ga0126310_106487342	3300010044	Serpentine Soil	GGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRRIVFSRAYDIEYAAV*
Ga0126311_100813822	3300010045	Serpentine Soil	MRAVLCASVCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVIRRAYDIEYATV*
Ga0126311_114462172	3300010045	Serpentine Soil	VKEAMAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCA
Ga0126306_118942081	3300010166	Serpentine Soil	VKEAMAMRAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEE
Ga0182000_106153411	3300014487	Soil	LGISYFRSVTRSSIVALKEEMNMRAVQKGRATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATA*
Ga0182001_101084282	3300014488	Soil	VKEAIAMLAVQTGGTTTRAVLCASLCNCRHTLRADGDERLVEVALEHLRYNHPAAPLGEERVRSIVSSHAYDIEYATV*
Ga0190266_110914191	3300017965	Soil	RAVQEGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRGIVFSRAYDIEYATA
Ga0190275_100100584	3300018432	Soil	MPDPMEEAESMQAVQTREATIRAVLCASLCNCRHTLRASGDERLVEVALEHLRRNHPAAPLVEDRVRRIVLSRAYDIDYTAV
Ga0190275_100203697	3300018432	Soil	MEEAENMQAVQTREATMRAVLCASLCNCRHTLRASGDERLVEVALEHLRRNHPAAPLVEERVRRIVFSRAYDIDYTAV
Ga0190275_100358171	3300018432	Soil	MQAVQNGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRRIVFSRAYDIEYTAV
Ga0190275_106890172	3300018432	Soil	MNMQAVQIRGATMRAVLCASLCNCRHTLRAEGDEMLVEVALEHLRHNHPAAPLVEERVRRIVFSRAYDIEYGAL
Ga0190269_101027811	3300018465	Soil	VKEAITMLAVQTGGTTTRAVLCASLCNCRHTLRADGDERLVEVALEHLRHNHPAAPLREERVRRIVSRRA
Ga0190269_103925501	3300018465	Soil	MMEETITMLAVQERRATMRAVLCASLCNCRHTLRAEDDVGLVEVALEHLRHNHPAAPLQSERVRRIVLSRAYDIEYAAV
Ga0190269_111427101	3300018465	Soil	VKEAMAMRAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRNIVLTRAYDIEYATA
Ga0190268_100106382	3300018466	Soil	VKEAMAMRAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV
Ga0190268_100402822	3300018466	Soil	VKEAITMLAVQTGGTTTRAVLCASLCNCRHTLRADGDERLVEVALDHLRHNHPAAPLREERVRRIVSSHAYDIEYAGV
Ga0190268_102029731	3300018466	Soil	MRAVQKGRDTMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATA
Ga0190268_106864041	3300018466	Soil	MMRAVQEGRATMRAILCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRRIVFSRAYDIEHGAV
Ga0190268_107940161	3300018466	Soil	MLAVQTGGGATMRAVLCASVCNCRHTLRADGDERLVEVALEHLRRNHPAAPLREERVRRIVLSRAYDIEYATA
Ga0190273_104604422	3300018920	Soil	MLAVQEGGATTRAVLCASLCNCRHTLRADGDERLVEVAIEHLRQQHPAAPLVEERVRRIISTRAYDIEYATV
Ga0190264_100738453	3300019377	Soil	RRSVVSAPIKEAMDMLAVQTGEEATIRAVLCASLCNCRHTLRADGDESLVEVALEHLRHNHPAAPLREERVRRIVFTCAYDIEYAAV
Ga0190264_101060021	3300019377	Soil	MRAMQEGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV
Ga0190267_104592511	3300019767	Soil	LIEEEMDMRAVQEGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRGIVFSRAYDIEYATA
Ga0190267_105820471	3300019767	Soil	TMRAVLCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRRIVFSRAYDIEYAAV
Ga0190267_108262551	3300019767	Soil	MTRSEVYAQVKEAMDMLAVQTGGGATMRAVLCASVCNCRHTLRADGDERLVEVALEHLRRNHPAAPLREERVRNIVFTRAYDIEYATA
Ga0209574_100955261	3300027809	Agave	MQAVQERRATMRAVLCASLCNCRHTLRADGEERLVEVALEHLRQQHPAAPLVEARVRRIVHTRAYDIEYATV
Ga0307276_100380282	3300028705	Soil	MLAVQKGGATMRAVLCASMCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRGIVFSRAYDIEYAAV
Ga0307276_100896591	3300028705	Soil	MRAVQKGGATMRAVLCASLCNCRYTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATV
Ga0307318_100261581	3300028744	Soil	MRALQTGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRGIVFSRAYDIEYAAV
Ga0307297_100057722	3300028754	Soil	MQAVQERKATMRAVLCASLCNCRHTLRAESEERLVEVALEHLRKQHPAAPLVEARVKRIIHTRAYDIEYATV
Ga0307297_101113441	3300028754	Soil	MLAVQERRATMRAVLCASLCNCRHTLRAEDDEGLVEVALEHLRHNHPAAPLQRERVRRIVLSRAYDIEYATV
Ga0307306_102233241	3300028782	Soil	MQAVQERKATMRAVLCASLCNCRHTLRAESEERLVEVALEHLRKQHPAAPLVEARVRRIIHT
Ga0307277_100399321	3300028881	Soil	MLAVQKGGATMRAVLCASMCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRGIV
Ga0268240_101304422	3300030496	Soil	MEEAMNMQAVQNGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLRHNHPAAPLVEERVRRIVFSRAYDIDYAAV
Ga0268242_10850041	3300030513	Soil	VKEAIAMLAVQTGGTTTRGVLCASLCNCRHTLRADGDERLVEVALEHLRYNHPAAPLGEERVRSIVSSHAYDIEYATV
Ga0268251_101152102	3300032159	Agave	VKEVMAMQAMREGEATMRAVLCASVCNCRHTLRADGDEGLVEVALEHLRRNHPVAPLGEERVRRIVLSCAYDIEYARV
Ga0268251_104262362	3300032159	Agave	MQAVQERRATMRAVLCASLCNCRHTLRADGEERLVEVALEHLRQQHPAAPLVEARVRRIV
Ga0268251_105949461	3300032159	Agave	VQKGGATMRAVLCASLCNCRHTLRAEGDERLVEVALEHLKHNHPAAPLVEERVRRIVFSRAYDIEYATV
Ga0268251_105952001	3300032159	Agave	LKEAMAMQAVQRGGAKMRAVLCASLCNCRHTLRADGDERLVETALEHLRRNHPAAPLREERVRKIVYRRAYDIEYATA
Ga0268251_106150612	3300032159	Agave	MLAVQKGGATMRAVLCASLCNCRHTLRAENDQRLVEVALEHLRHNHPAAPLVEERIRRIVFTRAYSIEQATL
Ga0334930_029529_60_302	3300034005	Sub-Biocrust Soil	MTMLAVQEGGATTRAVLCASLCNCRHTLRADGDERLVEVALEHLRRQHPAAPLVEERVRKIVFARAYDIEYVNTAAPATR
Ga0334936_016068_1295_1555	3300034007	Biocrust	LRSGKPAQEEEAIIMQAVQERRATMRAVLCASLCNCRHTLRAESEDRLVEVALEHLRQQHPAAPLVEARVRRAVRTHAYDIEYATV
Ga0334936_104656_352_588	3300034007	Biocrust	MTMLAVQEGGATTRAVLCASLCNCRHTLRADGDERLVEVALEHLRQQHPAAPLIEERVRRIVFTRAYDIEYTTAPGGG
Ga0334911_027178_406_630	3300034131	Sub-Biocrust Soil	MNMQAVQTRKATMRAVLCASLCNCRHTLRAEGDERLVDVALEHLRHNHPAAPLREERVRRIVLSCAYDIEYATM
Ga0334915_090304_414_632	3300034132	Hypolithic Biocrust	VKAIKSGIFDPTKGAMNMQAVQTRKATMRAVLCASLCNCRHTLRAEGDERLVDVALEHLRHNHPAAPLREERV
Ga0334915_145544_93_305	3300034132	Hypolithic Biocrust	MTMLVVQERGATTRAVLCASLCNCRHTLRAEGDERLVEVAIEHLRHNHPAAPLVEERVRRIVFSRAYDIE
Ga0334937_039234_667_903	3300034221	Biocrust	MTMLAVQEGGATTRAVLCASLCNCRHTLRADGDERLVEVALEHLRQQHPAAPLIEERVRRIVFTRAYDIEYTKAPGGG
Ga0334917_008441_945_1169	3300034391	Hypolithic Biocrust	MNMLAVQERRATMRAVLCASLCNCRHTLRAEDDEGLVEVALEHLRHNHPAAPLQRERVRRIVLSRAYDIEYATV
Ga0334917_023076_1_252	3300034391	Hypolithic Biocrust	GIFDPTKGAMNMQAVQTRKATMRAVLCASLCNCRHTLRAEGDERLVDVALEHLRHNHPAAPLREERVRRIVLSCAYDIEYATM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084698

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences