Metagenome / Metatranscriptome Family F084533

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084533
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	84 residues
Representative Sequence	SNRLAVAVRRWLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVVILAATTAIAIEALRRQTLREFPENPHPAVGKAPGAT
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.54 %
% of genes from short scaffolds (< 2000 bps)	86.61 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.714 % of family members)
Environment Ontology (ENVO)	Unclassified (35.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.39% β-sheet: 0.00% Coil/Unstructured: 45.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00884	Sulfatase	12.50
PF00196	GerE	6.25
PF04199	Cyclase	4.46
PF13426	PAS_9	3.57
PF02781	G6PD_C	1.79
PF00155	Aminotran_1_2	1.79
PF07885	Ion_trans_2	1.79
PF00654	Voltage_CLC	0.89
PF08448	PAS_4	0.89
PF07690	MFS_1	0.89
PF06224	HTH_42	0.89
PF13396	PLDc_N	0.89
PF07876	Dabb	0.89
PF00723	Glyco_hydro_15	0.89
PF09335	SNARE_assoc	0.89
PF03781	FGE-sulfatase	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	4.46
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	1.79
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.89
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.89
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.89
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.89
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.25 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.00 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.00 %
Unclassified	root	N/A	18.75 %

Name	Rank	Taxonomy	Distribution
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	34.82 %
Unclassified	root	N/A	18.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.71 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.25 %

Name	Rank	Taxonomy	Distribution
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	34.82 %
Unclassified	root	N/A	18.75 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6.25 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.46 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.68 %

Name	Rank	Taxonomy	Distribution
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	34.82 %
Unclassified	root	N/A	18.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.46 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.46 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	1.79 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.89 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	34.82 %
Unclassified	root	N/A	18.75 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.46 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1.79 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.89 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	34.82 %
Unclassified	root	N/A	18.75 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	4.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.46 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1.79 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.89 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.89 %

Name	Rank	Taxonomy	Distribution
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	34.82 %
Unclassified	root	N/A	18.75 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	4.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.46 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1.79 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.89 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig507336	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300000891\|JGI10214J12806_11040088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300004157\|Ga0062590_101761204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	633	Open in IMG/M
3300004479\|Ga0062595_102537178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	512	Open in IMG/M
3300004801\|Ga0058860_10082872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	748	Open in IMG/M
3300005093\|Ga0062594_100469586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300005093\|Ga0062594_102253447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	591	Open in IMG/M
3300005162\|Ga0066814_10120231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300005163\|Ga0066823_10125184	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005164\|Ga0066815_10125001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	503	Open in IMG/M
3300005345\|Ga0070692_10941976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300005347\|Ga0070668_100964421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	765	Open in IMG/M
3300005440\|Ga0070705_100073448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2075	Open in IMG/M
3300005444\|Ga0070694_100409724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1063	Open in IMG/M
3300005457\|Ga0070662_100190875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1620	Open in IMG/M
3300005535\|Ga0070684_100596280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1027	Open in IMG/M
3300005545\|Ga0070695_100764714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300005545\|Ga0070695_101813131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300005577\|Ga0068857_102388595	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005719\|Ga0068861_101811822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300005764\|Ga0066903_107917255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300006175\|Ga0070712_100976211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300006358\|Ga0068871_101042029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300006755\|Ga0079222_10522211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300006852\|Ga0075433_11497605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	583	Open in IMG/M
3300009148\|Ga0105243_10075940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	2728	Open in IMG/M
3300009148\|Ga0105243_10943360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	861	Open in IMG/M
3300009148\|Ga0105243_10965628	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300009174\|Ga0105241_10164039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1829	Open in IMG/M
3300010041\|Ga0126312_11164996	Not Available	567	Open in IMG/M
3300010326\|Ga0134065_10225195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	689	Open in IMG/M
3300010400\|Ga0134122_13069150	Not Available	521	Open in IMG/M
3300010403\|Ga0134123_10076498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2594	Open in IMG/M
3300010403\|Ga0134123_13230976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	525	Open in IMG/M
3300012198\|Ga0137364_10156582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1651	Open in IMG/M
3300012212\|Ga0150985_120759104	Not Available	786	Open in IMG/M
3300012353\|Ga0137367_10757738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	675	Open in IMG/M
3300012582\|Ga0137358_11014051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	536	Open in IMG/M
3300012903\|Ga0157289_10334971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	547	Open in IMG/M
3300012915\|Ga0157302_10552121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	508	Open in IMG/M
3300012951\|Ga0164300_10995631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	539	Open in IMG/M
3300012951\|Ga0164300_11167864	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012957\|Ga0164303_10633785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	710	Open in IMG/M
3300012957\|Ga0164303_11253928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	546	Open in IMG/M
3300012958\|Ga0164299_11128862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300012960\|Ga0164301_10472505	Not Available	897	Open in IMG/M
3300012960\|Ga0164301_11823916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300012961\|Ga0164302_10097695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1614	Open in IMG/M
3300012977\|Ga0134087_10377479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	684	Open in IMG/M
3300012989\|Ga0164305_12144904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	513	Open in IMG/M
3300013297\|Ga0157378_11117306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	826	Open in IMG/M
3300013306\|Ga0163162_12834011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300014166\|Ga0134079_10279700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300014325\|Ga0163163_11830112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300018027\|Ga0184605_10108239	Not Available	1231	Open in IMG/M
3300018028\|Ga0184608_10446592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	557	Open in IMG/M
3300018051\|Ga0184620_10104383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	877	Open in IMG/M
3300018051\|Ga0184620_10179434	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300018061\|Ga0184619_10281086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	764	Open in IMG/M
3300018061\|Ga0184619_10458456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	568	Open in IMG/M
3300019867\|Ga0193704_1022711	Not Available	1274	Open in IMG/M
3300020022\|Ga0193733_1065796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1020	Open in IMG/M
3300021080\|Ga0210382_10410838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	599	Open in IMG/M
3300021344\|Ga0193719_10024897	Not Available	2567	Open in IMG/M
3300021445\|Ga0182009_10392710	Not Available	716	Open in IMG/M
3300022694\|Ga0222623_10025113	Not Available	2243	Open in IMG/M
3300022756\|Ga0222622_10362805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1012	Open in IMG/M
3300022898\|Ga0247745_1078789	Not Available	550	Open in IMG/M
3300025901\|Ga0207688_11023407	Not Available	522	Open in IMG/M
3300025933\|Ga0207706_10220100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662	Open in IMG/M
3300025937\|Ga0207669_11129230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	662	Open in IMG/M
3300026023\|Ga0207677_12093875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	526	Open in IMG/M
3300026075\|Ga0207708_11896673	Not Available	522	Open in IMG/M
3300026322\|Ga0209687_1127182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	820	Open in IMG/M
3300026552\|Ga0209577_10485785	Not Available	833	Open in IMG/M
3300028281\|Ga0247689_1010183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1186	Open in IMG/M
3300028381\|Ga0268264_12337524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	541	Open in IMG/M
3300028592\|Ga0247822_11321773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	605	Open in IMG/M
3300028708\|Ga0307295_10232879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	527	Open in IMG/M
3300028711\|Ga0307293_10073170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1078	Open in IMG/M
3300028712\|Ga0307285_10038727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1163	Open in IMG/M
3300028713\|Ga0307303_10057514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300028714\|Ga0307309_10011883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1579	Open in IMG/M
3300028718\|Ga0307307_10002495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4614	Open in IMG/M
3300028721\|Ga0307315_10208794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	606	Open in IMG/M
3300028722\|Ga0307319_10004498	All Organisms → cellular organisms → Bacteria	4252	Open in IMG/M
3300028755\|Ga0307316_10027234	Not Available	1851	Open in IMG/M
3300028778\|Ga0307288_10255277	Not Available	688	Open in IMG/M
3300028784\|Ga0307282_10608480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	530	Open in IMG/M
3300028793\|Ga0307299_10000856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10165	Open in IMG/M
3300028793\|Ga0307299_10013033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	2944	Open in IMG/M
3300028814\|Ga0307302_10045545	Not Available	2037	Open in IMG/M
3300028875\|Ga0307289_10014823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2989	Open in IMG/M
3300028881\|Ga0307277_10273170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300028884\|Ga0307308_10274044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300030904\|Ga0308198_1032400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300030905\|Ga0308200_1151202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031094\|Ga0308199_1093088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	654	Open in IMG/M
3300031094\|Ga0308199_1179661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	522	Open in IMG/M
3300031114\|Ga0308187_10149033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300031152\|Ga0307501_10131538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	663	Open in IMG/M
3300031231\|Ga0170824_106096558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	930	Open in IMG/M
3300031740\|Ga0307468_101608424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	607	Open in IMG/M
3300031892\|Ga0310893_10297901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	682	Open in IMG/M
3300031908\|Ga0310900_10756456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	783	Open in IMG/M
3300032180\|Ga0307471_101782117	Not Available	768	Open in IMG/M
3300033551\|Ga0247830_11451072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	549	Open in IMG/M
3300034681\|Ga0370546_020892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.14%
Host-Associated	Host-Associated	17.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.11%
Plants	Host-Associated → Plants	16.96%
Aquatic	Environmental → Aquatic	8.04%
Human	Host-Associated → Human	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.93%
Sediment	Environmental → Aquatic → Sediment	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Roots	Host-Associated → Plants → Roots	1.79%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Digestive System	Host-Associated → Human → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.07%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_04242500	2124908045	Soil	LAGPNRLAVAFRRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVVILAATTAIAIEALRRQTLREFPENPHPAVGKAPGAT
JGI10214J12806_110400881	3300000891	Soil	AGPNRPAVAVRRWLAPSFRHHPIVVWAAALFVFLILLAWGPTGSNRQLLGVVILAATTAVGIEALRRQTLREFPEDPHPAPALK*
Ga0062590_1017612041	3300004157	Soil	SYGALVLLATVLAGQNRPAVAIRRWLAPSFRHHPIVVWLAAFAVFLILLAWGPTTGDRRLLGVAILAVTTAIGIEALRRQTLREFPEDRQPAAGKASSAT*
Ga0062595_1025371781	3300004479	Soil	HHPIVVWATALFLFLILLAWGPTTGDRRLVGVALLAATAAIAIEALRRQTLREFPEDSSPAVGKAPRAT*
Ga0058860_100828721	3300004801	Host-Associated	GILLVVYGALVLIATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT*
Ga0062594_1004695863	3300005093	Soil	IRGWLAPSFRHHPIVVWVAALFLFLILLAWGPTAGDRRLLGVALLAATTAVAIEALRRQTLREFPEDPDSAPASR*
Ga0062594_1022534471	3300005093	Soil	LAGTNRPAVAVRRWLAPAFRHHPIVVWLAALAVFLILLAWGPTTGDQRLLGVAILAATTAVAIEALRRQTLREFPEKAAGAT*
Ga0066814_101202312	3300005162	Soil	AVAVRRWLAPSFRHHPIFVWTAALFLFLILLAWGPTAGNRQLLGVAILAVTAAIAIEALRRQTLREFPEDPHPAVGKTPGAT*
Ga0066823_101251842	3300005163	Soil	GALVLIATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTTAIAIEALRRQTLREFPENRPLAVDKAPGAT*
Ga0066815_101250012	3300005164	Soil	RHHPVVVWLAALALFLILLAWGPTTGDRRLLGVALLAATAAIAIEALRRQTLREFPEDRPLAVGKAPGAT*
Ga0070692_109419762	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	ALVLLATVLAGPNRPAVAIRGWLAPSFRHHPIVVWVAALFLFLILLAWGPTAGDRRLLGVALLAATTAVAIEALRRQTLREFPEDPDSAPASR*
Ga0070668_1009644212	3300005347	Switchgrass Rhizosphere	RWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT*
Ga0070705_1000734481	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT*
Ga0070694_1004097242	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AGPNRPAVAVRRWLAPSFRHHPIVVWAAGAAVFLILLAWGPTAGNRQLLGVAILAVTTAIAIEALRRQTLREFPEDARPAVGKTPGTT*
Ga0070662_1001908753	3300005457	Corn Rhizosphere	NRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT*
Ga0070684_1005962803	3300005535	Corn Rhizosphere	GPNRPAIAIRRWLAPSFRHHPIIVWATAAAVFLILLAVGPTAGNRQLLGVALLAATTAIAIEALRRQTLREFPEDPPAAVGEAPGPA*
Ga0070695_1007647142	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AGPNRLAVAFRRSLAPTFRHHPIVVWVAALFFFLILLAVGPTAGNRQLLGVVILAAATAVAIEALRRQTLREFPENPHPVVAKAPGAT*
Ga0070695_1018131312	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	NRPAVAVRRWLEPSFRHHPIVVWAAAAAVFLILLAWGPTAGNRQLLGVAILAVTTAIAIEALRRQTLREFPEDARPAVGKTPGTT*
Ga0068857_1023885951	3300005577	Corn Rhizosphere	ALVLIATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT*
Ga0068861_1018118222	3300005719	Switchgrass Rhizosphere	LAGPNRLAVAFRRSLAPSFRHHPIVVWVAALFVFLILLAVGPTAGNRQLLGIVLLAATTAVAIEALRRETLREFPEDPHPAVGKAPGAT*
Ga0066903_1079172552	3300005764	Tropical Forest Soil	PSRPAVAVRRWLAPSFRQHPVVVWVAALAVFLILVAWGPEAGNRGLLGVAILAVTTAIAIEALRRQTLREFPEGPPAAGP*
Ga0070712_1009762112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FRHHPIVVWVAALFFFLILLAVGPTAGNRQLLGVVILAAATAIAIEALRRQTLREFPENPHPAVAKAPGAT*
Ga0068871_1010420291	3300006358	Miscanthus Rhizosphere	GVLVLVVTVLAGPNRLAVAFRRSLAPTFRHHPIVVWVAALFFFLILLAVGPTAGNRQLLGVVILAAATAVAIEALRRQTLREFPENPHPVVAKAPGAT*
Ga0079222_105222111	3300006755	Agricultural Soil	FRHHPIVVWVAALFFFLILLAVGPTAGNRQLLGVVLLAAATAIAIEALRRQTLREFPENPHPVVGKAPGAT*
Ga0075433_114976051	3300006852	Populus Rhizosphere	TVLAGPNRPAVAVRRWLAPAFRHHPIVVWTATLFLFLILLAWGPTAGNRQLLGVVILAATTAVAIEALRRQTLREFPEDPPPAVGKVP*
Ga0074063_141054742	3300006953	Soil	HHPVAVWATGIGVFLLLLAVGPTAGNRQLVGVAILAVSAAIAIEALRRQTLREFPESQPPAVGKAPGAT*
Ga0105243_100759401	3300009148	Miscanthus Rhizosphere	ILVVYGALVLLATALAGPNRPAVAFRRWLAPSFRHHPIVVWLVALAVFLILLAWGPTAGDRRLLGVALLAVTAAIAIEALRRQTLREFPEDPRPAVSKAPGAT*
Ga0105243_109433602	3300009148	Miscanthus Rhizosphere	NRLAVAFRRSLAPTFRHHPIVVWVAALFFFLILLAVGPTAGNRQLLGVVILAAATAVAIEALRRQTLREFPENPHPVVAKAPGAT*
Ga0105243_109656281	3300009148	Miscanthus Rhizosphere	NRPAVVLRRWLAPTFRHHPIVVWLIALALFLVLLAWGPAAGNRALLGVALLAATTAVAIEALRRQTLREFPEDPPPAVGKVP*
Ga0105241_101640391	3300009174	Corn Rhizosphere	ATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT*
Ga0126312_111649962	3300010041	Serpentine Soil	RHHPIVVWATALALFLILLAWGPTAGDRRLLGVAILAATTAIAIEALRRQTLREFPKTQSPAVGKAPGAT*
Ga0134065_102251952	3300010326	Grasslands Soil	VVYGALVLIATVFAGPNQPATAVRRWLAPSFRHHPIVVWAAALFLFLILLAWGPTAGNRQLLGVVILAATTAVAIEALRRQTLREFPEDPHPAVGKASGAS*
Ga0134122_130691502	3300010400	Terrestrial Soil	RHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPTAVGKAPGAT*
Ga0134123_100764983	3300010403	Terrestrial Soil	AFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT*
Ga0134123_132309762	3300010403	Terrestrial Soil	PAVALRRSLAPSFTNHPIVVWAAALFLFVVLLAWGPTAGNRQLLGVVLLAATTAVAIEALRRQTLREFPATPRPVPATSGGFGPPASK*
Ga0137364_101565824	3300012198	Vadose Zone Soil	LAGSNRLAVAFRRWLAPSFRHHPIVVWVAALFVFLLLLAVGPTAGDRQLLGVAILAATTAIAIEALRRQTLREFPEGPHPAVAKTPGTT*
Ga0150985_1207591041	3300012212	Avena Fatua Rhizosphere	LAPSFRHHPIVVWLAALAVFLILLAWGPTAGDRRLLGVAILAATTAIAIEALRRQTLREFPDDPHPAVGKTSGVS*
Ga0137367_107577383	3300012353	Vadose Zone Soil	SNRLAVAVRRWLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVVILAATTAIAIEALRRQTLREFPENPHPAVGKAPGAT*
Ga0137358_110140512	3300012582	Vadose Zone Soil	VALRRWLAPSFRHHPLVVWAAALALFLILLAWGPTAGNRQLLGVAILAATAAIAIEALRRQTLREFPEDPHPAIGKTPGAT*
Ga0157289_103349711	3300012903	Soil	VLAGPNRPAVAIRRWLAPSFRHHPIVVWLAALAVFLILLAWGPTAGDRRLLGVAILAATTAIAIEALRRQTLREFPDDPHPAVGKTSGAS*
Ga0157302_105521211	3300012915	Soil	NRPAVALRRWLAPSFRHHPIVVWLAALAVFLILLAWGPTAGDRRLLGVAILAATTAIAIEALRRQTLREFPDDPHPAVGKVSGAR*
Ga0164300_109956311	3300012951	Soil	RRWLAPSFRHHPIVIWATALVVFLILLAWGPTSGNRRLLGVAVLAATTAIAIEALRRQTLREFPEDPPATVGNASGAT*
Ga0164300_111678642	3300012951	Soil	GILLVVYGALVLIATALAGPNRPALALRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAITAAIAIEALRRQTLREFPENRPPAVGKAPGAT*
Ga0164303_106337852	3300012957	Soil	LAGPNRPAVAVRRWLAPAFRHHPIVVWTAALFLFLILLAWGPTAGNRQLLGVVILAVTTAIAIEALRRQTLREFPEDPHPAVVKTPGAT*
Ga0164303_112539281	3300012957	Soil	NRPALAFRRWLAPIFRHHPVAVWATGIGVFLLVIAVGPRAGNRQLVGLAILAVTTAIAIEALRRQTLREFPENRPPAVGKAPGAT*
Ga0164299_111288622	3300012958	Soil	RWLAPSFRHHPIIVWGAALAVFLILLAWGPTAGNRQLLGVAILAVTAAIAIEALRRQTLREFPEDPHPAVGKTPGAT*
Ga0164301_104725052	3300012960	Soil	APIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPLAVGKSPGAT*
Ga0164301_118239162	3300012960	Soil	LAPSFRHHPIVVWTTVLFLFLILLAWGPKAGDRQLAGVLILAATTVIAIEALRRQTLREFPEDPRSAPAST*
Ga0164302_100976951	3300012961	Soil	LVLLATVVAGPNRPAVAVRRWLAPSFRHHPIIVWGAALAVFLILLAWGPTAGNRQLLGVVILAVTTAIAIEALRRQTLREFPEDPHPAVVKTPEAT*
Ga0134087_103774791	3300012977	Grasslands Soil	TVLAGPNRPAVAVRRWLAPSFRDHPVVVWATALALFLLLLAVGPTAGDRQLLGVAILAATTAIAIEALRRQTLREFPQDPHPAVVKTPGAT*
Ga0164305_121449042	3300012989	Soil	AFRRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVVILAATTAVAIEALRRQTLREFPENPHPAVGKAPGAT*
Ga0157378_111173062	3300013297	Miscanthus Rhizosphere	NRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAITAAIAIEALRRQTLREFPENRPPAVGKAPGAT*
Ga0163162_128340111	3300013306	Switchgrass Rhizosphere	VALRRSLAPSFTNHPIVVWAAALFLFVVLLAWGPTAGNRQLLGVVLLAATTAVAIEALRRQTLREFPATPRPVPATSGGFGPPASK*
Ga0134079_102797001	3300014166	Grasslands Soil	ASVAVRRWLAPIFRHHPIVVWVAALFLFLFLLAVGPTAGNRQLLGIVLLAATTAIAIEALRRQTLREFPEDPHSALGKAPGTT*
Ga0163163_118301122	3300014325	Switchgrass Rhizosphere	ILATVLAGPNRPAVAVRRWLAPSFRHHPIVVWTAALFVFLILLAWGPAAGNRQLLGVVILAATTAVAIEALRRETLREFPEDPHSVPASK*
Ga0173483_106036042	3300015077	Soil	IVVWATALGVFLLLLAWGPTAGDRRLLGVAILAATTAIAIEALRRQTLREFPEGPHPAAGKAPAAR*
Ga0184605_101082393	3300018027	Groundwater Sediment	SFRHHPIVVWATALAVFLILLAWGPTAGDRRLLGVVLLAATTAVAVEALRRQTLREFPEGPPPSVGKAPEAT
Ga0184608_104465922	3300018028	Groundwater Sediment	AGPNRLAVAFRRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVVILAATTAVAIEALRRETLREFPENPQPAVGKAPGAT
Ga0184620_101043833	3300018051	Groundwater Sediment	LVLLATALAGPNRPAVAVRRSLAPSFRDHPIVVWVAALFLFLILLAVGPTAGNRQLLGVALLAATTAIAIEALRRQTLREFPETPPPALGKTPGPT
Ga0184620_101794341	3300018051	Groundwater Sediment	AVILVVYGVLVLLFTVFSGPNRPAVAVRRWLAPSFRHHPVVVWATGIGVFLILLAVGPTAGNRQLLGVAILAVLTAIAIEALRRQTLREFPEDRPPVIGKAPGAT
Ga0184619_102810862	3300018061	Groundwater Sediment	LAPSFRHHPIVVWASGLAVFLILLAWGPTAGSRRLLGVAILAATTAIAIEALRRQTLREFPEDLPPPAVGKSPGAT
Ga0184619_104584561	3300018061	Groundwater Sediment	LRRWLAPSFRHHPIGWATPLAVFLILLAVGPTAGDRRLLGVVLLAATTAVAIETLRRQTLREFPEDPHPAAGKASGAT
Ga0193704_10227111	3300019867	Soil	RRWLAPSFRHHPVVVWLAALALFLILLAWGPTAGDRQLLGVALLAATTAIAIEALRRQTLREFPEDPPPAVGKAPGAT
Ga0193733_10657962	3300020022	Soil	ALVLLATVLAGPNRPAVALRRWLAPSFRHHPIVVWAAALALFLILLAWGPTAGNRQLLGVAILAATAAIAIEALRRQTLREFPEDPHPAIGKTPGAT
Ga0210382_104108381	3300021080	Groundwater Sediment	GPNRLAVAFRRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGIVLLAATTAIAIEALRRQTLREFPENPRPAVGKAPGAT
Ga0193719_100248973	3300021344	Soil	PSFRDHPIVVWATALAVFLILLAVGPTAGDRRLLGVALLAATTAIAIEALRRQTLREFPENQPPAVGKTPT
Ga0182009_103927102	3300021445	Soil	RPAVVFRHSLAPSFSHHPIVVWAAALFLFLIVLAWGPTAGNRQLLGVVILAAMTAVAIEALRRQTLREFPEDPHRAGGKAPGAA
Ga0222623_100251131	3300022694	Groundwater Sediment	SFRHHPIVVWASAFALFLILLAWGPTAGDRQLLGVALLAATTAIAIEALRRQTLREFPETPPPALGKTPGPT
Ga0222622_103628051	3300022756	Groundwater Sediment	LVVTLLAGPNRLAVAFRRSLAPSFRDHPIVVWVAALFLFLILLAWGPTAGNRQLLGVVILAATTAIAIEALRRQTLREFPEGPHPAVGRTPGTT
Ga0247745_10787891	3300022898	Soil	RWLAPTFRHHPIVVWAVGLAVFLIVLAWGPASGNRALLGVALLAATTAIAIEALRRQTLREFPEDPPPAVEKAPRAP
Ga0207688_110234072	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	HHPIVVWAVGLAVFLIVLAWGPASGNRALLGVALLAATTAIAIEALRRQTLREFPEDPPPAVEKAPRAP
Ga0207706_102201003	3300025933	Corn Rhizosphere	LIATALAGQNRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPVAVGKAPGAT
Ga0207669_111292301	3300025937	Miscanthus Rhizosphere	IATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAITAAIAIEALRRQTLREFPENRPPAVGKAPGAT
Ga0207677_120938751	3300026023	Miscanthus Rhizosphere	VVYGALVLVVTLLAGPNRLAVAFRRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVLILAATTAVAIEALRRETLREFPENPQPAVGKAPGAT
Ga0207708_118966732	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GALVLLATVVAGPNRPALAIRRRLALSFRHHPIVVWLTALAVFLILLAWGPTAGDRRLLGVAILAATTAIAVEALRRQTLREFPDDPHPAVGRPVNV
Ga0209687_11271821	3300026322	Soil	AVRRWLAPTFRRHPIAVWAAALAVFLILLAWGPAAGSRPLVGVAILAATTAIAIEALRRQTLREFPEEPRPAVGKAPGPS
Ga0209577_104857852	3300026552	Soil	HPIAVWAAALAVFLILLAWGPAAGSRPLVGVAILAATTAIAIEALRRQTLREFPEEPRPAVGKAPGPS
Ga0247689_10101833	3300028281	Soil	VIAGPNRPAVAIRRWLAPTFRHHPIVVWAAAVAVFLILLAWGPAAGNRALLGVALLAATTAIAIEALRRQTLREVPEPPAALGKAPGST
Ga0268264_123375242	3300028381	Switchgrass Rhizosphere	GPNRPAVAFRRWLAPSFRHHPIVVWLVALAVFLILLAWGPTAGDRRLLGVALLAATTAVAIEALRRQTLREFPEDPDSAPASR
Ga0247822_113217732	3300028592	Soil	AGPNRPAVAVRRWLAPAFRHHPIVVWTAALFLFLILLAWGPTAGNRQLLGVVILAATTAVAIEALRRQTLREFPEDPRPTHVT
Ga0307295_102328791	3300028708	Soil	ANRPAVAVRRWLAPGFRHHPIVVWLAALAVFLILLAWGPTGGDRRLLGVALLAATTAIAIEVLRRQTLQEFPEDPHPAVAKVPDAT
Ga0307293_100331871	3300028711	Soil	HPIVVWVAALFLFLILLAWGPTAGNRQLLGVVILAATTAIAIEALRRQTLREFPEGPHPAVGRTPGTT
Ga0307293_100731701	3300028711	Soil	GPNQPAVAVRRWLAPSFRHHPVVVWVAALFVFLILLAWGPTAGDRRLLGVALLAATTAVAIEALRRQTLREFPSDPPSAIS
Ga0307285_100387271	3300028712	Soil	AGPNRPAVAVRRWLAPSFRHHPVVVWLAALALFLILLAWGPTTGDRALLGVLLLAATAAIAIEALRRQTLREFPEDSPPAIAKAPGAP
Ga0307303_100575142	3300028713	Soil	WLAPSFRHHPIVVWTTVLFLFLILLAWGPKAGNRQLAGVLILAATTAIAIEALRRQTLREFPEDSRPAVGKARST
Ga0307309_100118831	3300028714	Soil	PAVAVRRSLAPSFRDHPIVVWVAALFLFLILLAVGPTAGNRQLLGVALLAATTAIAIEALRRQTLREFPETPPPALGKTPGPT
Ga0307307_100024951	3300028718	Soil	RRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVVILAATTAVAIEALRRETLREFPENPQPAVGKAPGAT
Ga0307315_102087942	3300028721	Soil	ALVLLATALAGPNRPAVAIRRWLAPSFRHHPVVVWLAALALFLILLAWGPTTGDRALLGVLLLAATAAIAIEALRRQTLREFPEDSPPAIAKAPGAP
Ga0307319_100044981	3300028722	Soil	GPNRPAVAVRRSLAPSFRDHPIVVWVAALFLFLILLAVGPTAGNRQLLGVALLAATTAIAIEALRRQTLREFPETPPPALGKTPGPT
Ga0307316_100272341	3300028755	Soil	PSFRHHPVVVWLAALALFLILLAWGPTTGDRALLGVLLLAATAAIAIEALRRQTLREFPEDSPPAIAKAPGAP
Ga0307288_102552772	3300028778	Soil	FRHHPIVVWLAALAVFLILLAWGPTTGDRRLLGVAILAVTTAIAIEALRRQTLQEFPEGPHPAVGKAPAAT
Ga0307282_106084801	3300028784	Soil	LVLLATVLAGPNRPAVTVRGWLAPAFRHHPIIVWTAVLFLFLILLAFGPKAGSRELLGVVILAATTAVGIEALRRQTLREFPEGSPPAAAKTPRAT
Ga0307299_100008561	3300028793	Soil	AFRRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGIVLLAATTAIAIEALRRQTLREFPENPRPAVGKAPGAT
Ga0307299_100130333	3300028793	Soil	AGPNRPAVAIRRWLAPSFRHHPVVVWLAALALFLILLAWGPTAGDRRLLGVLLLAVTTAIAIEALRRQTLREFPEDPPAAVGKSSGAT
Ga0307302_100455451	3300028814	Soil	PAVAIRRWLAPSFRHHPVVVWLAALALFLILLAWGPTTGDRALLGVLLLAATAAIAIEALRRQTLREFPEDSPPAIAKAPGAP
Ga0307289_100148233	3300028875	Soil	LAPSFRHHPIVVWLAAFAVFLILLAWGPTTGDRRLLGVAILAVTTAIAIEALRRQTLQEFPEGPHPAVGKAPAAT
Ga0307277_102731701	3300028881	Soil	LAVAFRRSLAPSFRHHPIVVWVAALFLFLILLAWGPTAGNRQLLGVVILAATTAIAIEALRRQTLREFPEGPHPARVTYGGPGPPASK
Ga0307308_102740441	3300028884	Soil	LAVAFRRSLAPSFRHHPIVVWVAALFLFLILLAWGPTAGNRQLLGVVILAATTAIAIEALRRQTLREFPEGPHPAVGRTPGTT
Ga0308198_10324002	3300030904	Soil	VRRWLAPSFRHHPIVVWASAFALFLILLAWGPTAGDRQLLGVALLAATTAIGIEALRRQTLREFPEDPPAAAGKASGAT
Ga0308200_11512022	3300030905	Soil	FRHHPIVVWTTVLFLFLILLAWGPKAGNRQLAGVLILAATTAIAIEALRRQTLREFPEDSRPAVGKARST
Ga0308199_10930881	3300031094	Soil	IYGALVLIATAVAGPNRPALAFRRWLAPIFRHHPVAVWATGIGAFLLLLAVGPTAGNRQLVGVAILAVTAAIAIEALRRQTLREFPEGQPLAVGKAPGAT
Ga0308199_11796612	3300031094	Soil	PSFRHHPIVVWTTVLFLFLILLAWGPKAGNRQLAGVLILAATTAIAIEALRRQTLREFPEDSRPAVGKARST
Ga0308187_101490332	3300031114	Soil	SFRHHPIVVWVSALALFLILLAVGPTAGNRQLLGVALLAATTAIAIEALRRQTLREFPEDPHPAVGRAPRAT
Ga0307501_101315381	3300031152	Soil	YGVLVLLATVLAGGNRPAVSVRRWLAPTFRHHPIVVWLAALAVFLILLAWGPTTGDRRLLGVAILAATTAIAIEALRRQTLREFPEKAAGAT
Ga0170824_1060965582	3300031231	Forest Soil	LVATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIAVFLLLIAVGPKAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPAAVGKAPGAT
Ga0307468_1016084242	3300031740	Hardwood Forest Soil	ALVLIATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIVAFLLLLAVGPTAGNRQLVGVAILAVTAAIAIEALRRQTLREFPENRPTAVGKAPGAT
Ga0310893_102979011	3300031892	Soil	GALVLIATALAGPNRPALAFRRWLAPIFRHHPVAVWATGIGVFLLLIAVGPRAGNRQLVGLAILAVTAAIAIEALRRQTLREFPENRPTAVGKAPGAT
Ga0310900_107564561	3300031908	Soil	GVLVLVVTVLAGPNRLAVAFRRSLAPTFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVVILAAATAIAIEALRRQTLREFPENPHPVVAKAPGAT
Ga0306922_118459361	3300032001	Soil	HHPVVVWATAVAVFLILIAWGPTAGNRGLLGLALLAVTTAIAIEALRRQTLREFPEGPPAAGP
Ga0307471_1017821172	3300032180	Hardwood Forest Soil	WLAPSFRHHPIVVWAAALALFLILLAWGPTTGDRRLVGVALLAATTAIAIEALRRQTLREFPEDPPPGVGKAPGAT
Ga0247830_114510721	3300033551	Soil	VTLLAGPNRLAVAFRRSLAPSFRHHPIVVWVAALFLFLILLAVGPTAGNRQLLGVLILAATTAVAIEALRRETLREFPEDPQPAVGKAPGAT
Ga0370546_020892_2_304	3300034681	Soil	VIYGALVLVATALAGPNRPAVAVRRWLAPSFRHHPIVVWTTVLFLFLILLAWGPKAGNRQLAGVLILAATTAIAIEALRRQTLREFPEDSRPAVGKARST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084533

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences