Metagenome / Metatranscriptome Family F084492

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084492
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	48 residues
Representative Sequence	QNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Number of Associated Samples	103
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (26.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.33% β-sheet: 0.00% Coil/Unstructured: 58.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF14622	Ribonucleas_3_3	81.25
PF10502	Peptidase_S26	7.14
PF00717	Peptidase_S24	3.57
PF07969	Amidohydro_3	1.79
PF13502	AsmA_2	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	24.11 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.68 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	19.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	11.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Unclassified	root	N/A	1.79 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Unclassified	root	N/A	1.79 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001100\|JGI12703J13194_100981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1325	Open in IMG/M
3300001546\|JGI12659J15293_10118872	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300003220\|JGI26342J46808_1032692	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300004092\|Ga0062389_100634196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1236	Open in IMG/M
3300004152\|Ga0062386_100835135	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005176\|Ga0066679_10625906	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005610\|Ga0070763_10310389	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005921\|Ga0070766_10059984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2162	Open in IMG/M
3300006086\|Ga0075019_10044613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2500	Open in IMG/M
3300006176\|Ga0070765_100763618	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300007982\|Ga0102924_1247447	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300009143\|Ga0099792_10015330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	3319	Open in IMG/M
3300009523\|Ga0116221_1474494	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009552\|Ga0116138_1001733	All Organisms → cellular organisms → Bacteria	11815	Open in IMG/M
3300009632\|Ga0116102_1001735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8403	Open in IMG/M
3300009700\|Ga0116217_10991523	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009839\|Ga0116223_10305990	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300010159\|Ga0099796_10194216	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300011120\|Ga0150983_14516375	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300011120\|Ga0150983_15877330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300012096\|Ga0137389_11192013	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012927\|Ga0137416_12068014	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300014164\|Ga0181532_10129599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1539	Open in IMG/M
3300014165\|Ga0181523_10137202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1447	Open in IMG/M
3300014169\|Ga0181531_10088554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1841	Open in IMG/M
3300014501\|Ga0182024_10730919	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300014657\|Ga0181522_10546840	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300014657\|Ga0181522_10689525	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300017925\|Ga0187856_1112119	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300017938\|Ga0187854_10004338	All Organisms → cellular organisms → Bacteria	10740	Open in IMG/M
3300018022\|Ga0187864_10372877	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300018023\|Ga0187889_10489319	Not Available	525	Open in IMG/M
3300018026\|Ga0187857_10005518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9051	Open in IMG/M
3300018034\|Ga0187863_10269793	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018034\|Ga0187863_10555944	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300018038\|Ga0187855_10247354	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300018042\|Ga0187871_10009627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6693	Open in IMG/M
3300018047\|Ga0187859_10476210	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300020579\|Ga0210407_10101716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2184	Open in IMG/M
3300021181\|Ga0210388_11337936	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300021401\|Ga0210393_10618994	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300021402\|Ga0210385_11233241	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300021403\|Ga0210397_10860708	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300021405\|Ga0210387_10817397	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300021407\|Ga0210383_10371959	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300021420\|Ga0210394_10627182	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300021478\|Ga0210402_11016157	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300022531\|Ga0242660_1212850	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300022726\|Ga0242654_10326349	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300023056\|Ga0233357_1043554	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300023250\|Ga0224544_1021313	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300023255\|Ga0224547_1041582	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300025454\|Ga0208039_1081581	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300025612\|Ga0208691_1123580	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300027575\|Ga0209525_1035994	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300027648\|Ga0209420_1117544	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300027667\|Ga0209009_1140320	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300027745\|Ga0209908_10066525	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300027767\|Ga0209655_10061070	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300027825\|Ga0209039_10346780	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300027855\|Ga0209693_10633433	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027862\|Ga0209701_10639029	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300027882\|Ga0209590_10024366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3104	Open in IMG/M
3300027884\|Ga0209275_10791397	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300027889\|Ga0209380_10283533	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300027895\|Ga0209624_10914925	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300028017\|Ga0265356_1007897	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300028036\|Ga0265355_1006817	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300028047\|Ga0209526_10915540	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300028747\|Ga0302219_10278042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300028762\|Ga0302202_10413268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300028766\|Ga0302269_1039057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1510	Open in IMG/M
3300028801\|Ga0302226_10098828	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300029636\|Ga0222749_10119652	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300029907\|Ga0311329_10254193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1305	Open in IMG/M
3300029910\|Ga0311369_10962556	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300029939\|Ga0311328_10230724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1410	Open in IMG/M
3300029951\|Ga0311371_10285356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2344	Open in IMG/M
3300029951\|Ga0311371_11430183	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300029951\|Ga0311371_11761752	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300029999\|Ga0311339_10980066	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300030007\|Ga0311338_10494033	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300030044\|Ga0302281_10320649	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300030057\|Ga0302176_10443629	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300030058\|Ga0302179_10061770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1672	Open in IMG/M
3300030399\|Ga0311353_11529402	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300030494\|Ga0310037_10281685	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300030503\|Ga0311370_10077981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4760	Open in IMG/M
3300030509\|Ga0302183_10062812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1470	Open in IMG/M
3300030617\|Ga0311356_11284320	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300030618\|Ga0311354_11623168	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300030688\|Ga0311345_11300173	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300030693\|Ga0302313_10035681	All Organisms → cellular organisms → Bacteria → Acidobacteria	2281	Open in IMG/M
3300030741\|Ga0265459_13775967	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300030743\|Ga0265461_11470345	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300030813\|Ga0265750_1062456	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031040\|Ga0265754_1006863	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300031057\|Ga0170834_105013921	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031090\|Ga0265760_10124515	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300031708\|Ga0310686_103378795	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300031715\|Ga0307476_10007793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6563	Open in IMG/M
3300031715\|Ga0307476_10723097	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031718\|Ga0307474_10283140	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300031740\|Ga0307468_101663910	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031753\|Ga0307477_10222305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1311	Open in IMG/M
3300031823\|Ga0307478_11208809	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031962\|Ga0307479_10658180	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300034163\|Ga0370515_0334919	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300034163\|Ga0370515_0357631	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300034163\|Ga0370515_0415910	Not Available	567	Open in IMG/M
3300034282\|Ga0370492_0067080	All Organisms → cellular organisms → Bacteria → Acidobacteria	1470	Open in IMG/M
3300034282\|Ga0370492_0089388	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	23.21%
Plants	Host-Associated → Plants	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.57%
Freshwater	Environmental → Aquatic → Freshwater	21.43%
Peat	Environmental → Terrestrial → Peat	21.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.43%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.46%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	4.46%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.57%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.79%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001100	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12703J13194_1009811	3300001100	Forest Soil	NKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGGAPAAKK*
JGI12659J15293_101188721	3300001546	Forest Soil	LDMQNKYPDALKVANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAK*
JGI26342J46808_10326921	3300003220	Bog Forest Soil	KYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLIGGGGTPAPAPPKN*
Ga0062389_1006341962	3300004092	Bog Forest Soil	IFRLSVALDMQNKYPEALKFANQAVDLTKEGTAAGKAARDEKDRLTQLTGGASPAKN*
Ga0062386_1008351352	3300004152	Bog Forest Soil	NKYPEALKYANQAVDLTKEGTAAGDAARKEKDRLTQLTSGGAPPAK*
Ga0066679_106259061	3300005176	Soil	MQNRYPEALKFADQAVGLTKEGTSAGDAARKEKDRLTQLLMVSAPPAK*
Ga0070763_103103891	3300005610	Soil	GKYPDATKYCNQAVDLTKEGTPAGDAARQERDRLAKLTGGSAAPAQPAPAQPK*
Ga0070766_100599841	3300005921	Soil	VALDMQSKYPEALKYANQAVDMTKEGTAAGKAARDEKDRLTQLSGGASSPAPAPPKN*
Ga0075019_100446134	3300006086	Watersheds	MQNKYPEAQKYASQAVDMTKEGTPAGDAARKERDRLAQLTGGVAPKN*
Ga0070765_1007636181	3300006176	Soil	AVDLTKPGTGAGDAARKEKDRLIQLIGGINDTPAK*
Ga0102924_12474472	3300007982	Iron-Sulfur Acid Spring	KYPEALKYANQAVSMTQEGTPAGKAARDEKDRLTQLVGGSSTPAPAPPKN*
Ga0099792_100153301	3300009143	Vadose Zone Soil	NQAVDMTKEGTGAGDAARKEKDRLTQLSSGGAPPAKN*
Ga0116221_14744942	3300009523	Peatlands Soil	LKYANQAVDLTKEGTGAGDAARKEKDRLTQLTGGSVPPARN*
Ga0116138_100173311	3300009552	Peatland	YPDALKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK*
Ga0116102_10017351	3300009632	Peatland	LKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK*
Ga0116217_109915231	3300009700	Peatlands Soil	RLSVALDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTGGSAPPAKN*
Ga0116223_103059902	3300009839	Peatlands Soil	RYANQAVELTKEGTNAGDAARKEKDRLTQLSGGGAPPAKK*
Ga0099796_101942162	3300010159	Vadose Zone Soil	LDMQNKYPEALKYANQAVDMTKEGTGAGDAARKEKDRLTQLSSGGAPPPKN*
Ga0150983_145163753	3300011120	Forest Soil	VALDMQSKYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLTGGSSTPAPAPPKN*
Ga0150983_158773302	3300011120	Forest Soil	AVFRLSVALDMQNKYPEALKFANQAVDLTKPGTGAGDAARKEKDRLIQLIGGINDTPAK*
Ga0137389_111920132	3300012096	Vadose Zone Soil	PEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLLMVSAPPAK*
Ga0137416_120680141	3300012927	Vadose Zone Soil	LSVALDMQNKYAEGLKFANQAVDLTKEGTNAGDAARKEKDRLTQLLSGTTPPPK*
Ga0181532_101295993	3300014164	Bog	QAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK*
Ga0181523_101372021	3300014165	Bog	LDMQNKYPDALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK*
Ga0181531_100885543	3300014169	Bog	YPEALKYANQAVDSTKEGTPAGDAARKEKDRLTQLTGSGAPPAK*
Ga0182024_107309191	3300014501	Permafrost	MQNKYPDALKYADQAVDLTKTGTGAGDAARKEKDRLVQLIGGISEPPAK*
Ga0181522_105468402	3300014657	Bog	SVALDMQSKYPEALKYANQAVSMTQEGTPAGKAARDEKDRLTQLVGGSSTPAPAPPKN*
Ga0181522_106895251	3300014657	Bog	YANQAVDLTKPGTNAGDAARKEKDRLVQLIGGISEPPAK*
Ga0187856_11121192	3300017925	Peatland	YPDALKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187854_100043381	3300017938	Peatland	LKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187864_103728772	3300018022	Peatland	DALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK
Ga0187889_104893191	3300018023	Peatland	ALDMQNKYPDALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK
Ga0187857_100055187	3300018026	Peatland	MQNKYPDALKYADQAVDLTKAGIGAGDAARKEKDRLVQLIGGISEPPAK
Ga0187863_102697931	3300018034	Peatland	MQNKYPDALKYADQAVALTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187863_105559441	3300018034	Peatland	DMQSKYPEALKYASQAVDLTKEGTNAGDAARKEKDRLTQLTSSGAPAK
Ga0187855_102473542	3300018038	Peatland	PDALKYADQAVALTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187871_100096276	3300018042	Peatland	AVALTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187859_104762102	3300018047	Peatland	ALDMQSKYPEALKYANQAVSMTQEGTPAGKAARDEKDRLTQLVGGSSTPAPAPPKN
Ga0210407_101017161	3300020579	Soil	AVFLRSVALDMQNRYAEGLKFANQAVDLTKEGTPAGDAARKEKDRLTLLLSGSAPPVK
Ga0210388_113379361	3300021181	Soil	LDMQSKYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLIGGNSAPAPAPPKN
Ga0210393_106189942	3300021401	Soil	ALKYANQAVDMTKEGTATGDAARKEKDRLTQLTGGAPAVK
Ga0210385_112332411	3300021402	Soil	VALDMQSKYPDALKVANQAVGMTKEDTPVGKAARSERDRLTQMNGGAAPK
Ga0210397_108607081	3300021403	Soil	DMQSKYPDALKVANQAVGMTKEDTPVGKAARSERDRLTQMNGGAAPK
Ga0210387_108173972	3300021405	Soil	MQNKYPEALKYANQAVDLTKEGTAAGKAARDEKDRLTQLTGGSSS
Ga0210383_103719591	3300021407	Soil	KFANQAVDLTKEGTNTGDAARKERDRLIQLIGGVPAIK
Ga0210394_106271821	3300021420	Soil	ALKYASQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0210402_110161571	3300021478	Soil	YPEALKYASQAVDLTKEGTNSGDAARKEKDRLTQLTK
Ga0242660_12128502	3300022531	Soil	KYANQAVELTKEGTNAGDAARKEKDRLTELNKGGAPPAK
Ga0242654_103263491	3300022726	Soil	LDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTGGAAAPVKN
Ga0233357_10435541	3300023056	Soil	VALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLSSGGAPPAKN
Ga0224544_10213132	3300023250	Soil	DALKYANQAVDLTKAGTNAGDAARKEKDRLIQLVGGIPDTPKN
Ga0224547_10415822	3300023255	Soil	KYADQAVDLTKAGTGAGDAARKEKDRLVQLVGGISEPPAK
Ga0208039_10815811	3300025454	Peatland	LKVANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAK
Ga0208691_11235801	3300025612	Peatland	SVALDMQNKYPDAMKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK
Ga0209525_10359942	3300027575	Forest Soil	EALKYANQAVDLTKPGTGAGDAARKEKDRLIQLIGGISDTPAK
Ga0209420_11175441	3300027648	Forest Soil	DPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGTPPA
Ga0209009_11403202	3300027667	Forest Soil	ALKYANQAVDLTKPGTGAGDAARKEKDRLIQLIGGISDTPAK
Ga0209908_100665252	3300027745	Thawing Permafrost	MQNKYPEALKYANQAVDSTKAGTNAGDAARKEKDRLIQLIGGIPDTPAKN
Ga0209655_100610701	3300027767	Bog Forest Soil	MQNKYPDALKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0209039_103467801	3300027825	Bog Forest Soil	ALKYANQAVDLTKAGTGAGDAARKEKDRLTQLTSGTPPAK
Ga0209693_106334332	3300027855	Soil	VFRLSVALDMQSKYPEALKYANQAVDMTKEGTAAGKAARDEKDRLTQLSGGASSPAPAPPKN
Ga0209701_106390292	3300027862	Vadose Zone Soil	NKYPEALKFADQAVGLTKEGTNAGDAARKEKDRLTQLLMVSAPPAK
Ga0209590_100243661	3300027882	Vadose Zone Soil	YAEALKYANQAVDMTKEGTSAGDAARKEKDRLTQLSSGGAPPAKN
Ga0209275_107913972	3300027884	Soil	ALKVANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAK
Ga0209380_102835331	3300027889	Soil	QSKYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLIGGNGAPAPAPPKN
Ga0209624_109149251	3300027895	Forest Soil	VLRLSLALDQQNKYPEALKYAAQAVDLTKEGTNAGDAARKEKDRLTQLTGGSAPPAKK
Ga0265356_10078971	3300028017	Rhizosphere	LDQENKYPEALKYANQAVDMTKEGTGSGDASRKEKDRLTQLTGGAPAVK
Ga0265355_10068171	3300028036	Rhizosphere	NQAVDLTKPGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0209526_109155402	3300028047	Forest Soil	LDMQNKYAEGLKFANQAVDLTKEGTNAGDAARKEKDRLTQLLSGSAPPPK
Ga0302219_102780422	3300028747	Palsa	FRLSVALDMQNKYPDALKYANQAVDLTKAGTNAGDAARKEKDRLIQLVGGIPDTPKN
Ga0302202_104132681	3300028762	Bog	PEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDAPAK
Ga0302269_10390573	3300028766	Bog	QNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0302226_100988283	3300028801	Palsa	NQAVDLTKPGTGAGDAARKEKDRLIQLIGGISEPPAK
Ga0222749_101196521	3300029636	Soil	RLSVALDMQNRYAEGLKFANQAVDLTKEGTPAGDAARKEKDRLTLLLSGSAPPVK
Ga0311329_102541931	3300029907	Bog	MQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLT
Ga0311369_109625561	3300029910	Palsa	LSVALDMQSKYPEALKYANQAVDLTKEGTAAGDAARKERDRLTQLTGGGTPAPAPPKN
Ga0311328_102307241	3300029939	Bog	ALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0311371_102853564	3300029951	Palsa	PEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGNGAPPAK
Ga0311371_114301831	3300029951	Palsa	VALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0311371_117617522	3300029951	Palsa	LDMQSKYPEALKFANQAVDLTKEGTAAGDAARKERDRLTQLTGGGTPAPAPPKN
Ga0311339_109800661	3300029999	Palsa	SVALDMQSKYPEALKYANQAVDLTKEGTNEGDQARKERDRLTQLTGGGAPPAKN
Ga0311338_104940331	3300030007	Palsa	NKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0302281_103206491	3300030044	Fen	LKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0302176_104436291	3300030057	Palsa	PEALKYANQAVDLTKDGTGAGDAARKEKDRLIQLTGGAAPPPK
Ga0302179_100617703	3300030058	Palsa	LDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTSGGAPPAKN
Ga0311353_115294021	3300030399	Palsa	IRLSVALDMQSKYPEALKYANQAVDLTKEGTNEGDQARKERDRLTQLTGGGAPPAKN
Ga0310037_102816851	3300030494	Peatlands Soil	QAVDLTKEGTGAGDAARKEKDRLTQLTGGSAPPAKN
Ga0311370_100779811	3300030503	Palsa	PIAVFRLSVSLDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTSGGAPPAK
Ga0302183_100628123	3300030509	Palsa	LSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGNGAPPAK
Ga0311356_112843201	3300030617	Palsa	FRLSVSLDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTSGGAPPAKN
Ga0311354_116231681	3300030618	Palsa	MQSKYPEALKYANQAVDLTKEGTNEGDQARKERDRLTQLTGGGAPPAKN
Ga0311345_113001732	3300030688	Bog	NKYPEALKYANQAVDLTKQGSNVGDAARTEKDRLTQLTSGGAPPAK
Ga0302313_100356811	3300030693	Palsa	QGKYPEALKFANQAVDLTKPGTGAGDAARKEKDRLIQLIGGISEPPAK
Ga0265459_137759672	3300030741	Soil	VAVLRLSLSLDQQNKYPEALKYANQAVDLTKQGTNVGDAARTEKDRLTQLTSGGAPPAK
Ga0265461_114703452	3300030743	Soil	RLSLSLDMQSKYPEALKYASQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0265750_10624561	3300030813	Soil	EALKYANQAVDLTKEGTNAGDAARKEKARLTQLTSGTAPAKN
Ga0265754_10068631	3300031040	Soil	NKYPDALKYANQAVDLTKPGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0170834_1050139212	3300031057	Forest Soil	VALDMQSKYPEALKYANQAVDLTKEGTSAGDAARKEKERLTQLNGGGAPPAKN
Ga0265760_101245152	3300031090	Soil	QSRYPEALKYANQAVDLTKEGTNAGDAARKEKARLTQLTSGTAPAKN
Ga0310686_1033787951	3300031708	Soil	ANQAVDLTKEGTGAGDAARKEKDRLTQLSGSGAPPAK
Ga0307476_100077931	3300031715	Hardwood Forest Soil	LSVALDMQNKYPEALKFANQAVDLTKEGTNAGDAARKEKDRLTQLSSGGAPPAKN
Ga0307476_107230971	3300031715	Hardwood Forest Soil	FRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKERDRLTQLTGGAPAAKK
Ga0307474_102831401	3300031718	Hardwood Forest Soil	ANQAVDLTKPGTGAGDAARKEKDRLIQLIGGINDTPAK
Ga0307468_1016639102	3300031740	Hardwood Forest Soil	DMQNKYPEALKYANQAVDLTKEGTSAGDAARKEKDRVTQLLNGAPPAKN
Ga0307477_102223051	3300031753	Hardwood Forest Soil	NPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGGAPAAKK
Ga0307478_112088092	3300031823	Hardwood Forest Soil	VALDMQSKYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLTGGSSTPAPAPPKN
Ga0307479_106581802	3300031962	Hardwood Forest Soil	YPEALKFANQAVDLTKEGTNAGDAARKEKDRLTQLLGSTPPAKN
Ga0370515_0334919_2_163	3300034163	Untreated Peat Soil	SVALDMQNKYPEALKYANQAVDSTKEGTPAGDAARKEKDRLTQLTGSGAPPAK
Ga0370515_0357631_429_590	3300034163	Untreated Peat Soil	MQSKYPEALKYANQAVSMTQEGTPAGKAARDEKDRLTQLVGGSSTPAPAPPKN
Ga0370515_0415910_433_567	3300034163	Untreated Peat Soil	YPEALKYANQAVDSTKEGTPAGDAARKEKDRLTQLTGSGAPPAK
Ga0370492_0067080_1324_1470	3300034282	Untreated Peat Soil	MQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLIQLTGGAAPPPK
Ga0370492_0089388_3_149	3300034282	Untreated Peat Soil	QNKYPDALKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084492

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences