Metagenome Family F084425

Overview

Basic Information

• Family ID: F084425
• Family Type: Metagenome
• Number of Sequences: 112
• Average Sequence Length: 92 residues
• Representative Sequence: MHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPF
• Number of Associated Samples: 100
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 54.95 %
• % of genes near scaffold ends (potentially truncated): 95.54 %
• % of genes from short scaffolds (< 2000 bps): 90.18 %
• Associated GOLD sequencing projects: 90
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (99.107 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere (7.143 % of family members)
• Environment Ontology (ENVO): Unclassified (35.714 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (55.357 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 28.32%
  β-sheet: 7.08%
  Coil/Unstructured: 64.60%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04307	YdjM	31.25
PF01351	RNase_HII	25.89
PF13564	DoxX_2	2.68
PF00920	ILVD_EDD	1.79
PF14385	DUF4416	0.89
PF00285	Citrate_synt	0.89
PF08305	NPCBM	0.89
PF02826	2-Hacid_dh_C	0.89
PF09239	Topo-VIb_trans	0.89
PF03466	LysR_substrate	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	31.25
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	25.89
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	25.89
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	3.57
COG0372	Citrate synthase	Energy production and conversion [C]	0.89
COG1389	DNA topoisomerase VI, subunit B	Replication, recombination and repair [L]	0.89
COG1697	DNA topoisomerase VI, subunit A	Replication, recombination and repair [L]	0.89

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.11 %
Unclassified	root	N/A	0.89 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.11 %
Unclassified	root	N/A	0.89 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.11 %
Unclassified	root	N/A	0.89 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	0.89 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %
Unclassified	root	N/A	0.89 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.79 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %
Unclassified	root	N/A	0.89 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.89 %
Unclassified	root	N/A	0.89 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Unclassified	root	N/A	0.89 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	0.89 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Unclassified	root	N/A	0.89 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.89 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2162886011|MRS1b_contig_2344659	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197
2162886012|MBSR1b_contig_12596481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1358
3300000033|ICChiseqgaiiDRAFT_c0557976	All Organisms → cellular organisms → Bacteria → Acidobacteria	989
3300000955|JGI1027J12803_102257808	All Organisms → cellular organisms → Bacteria → Acidobacteria	630
3300004157|Ga0062590_101157846	All Organisms → cellular organisms → Bacteria → Acidobacteria	750
3300004480|Ga0062592_100322251	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183
3300005166|Ga0066674_10079294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1510
3300005180|Ga0066685_11025303	All Organisms → cellular organisms → Bacteria	544
3300005329|Ga0070683_100380969	All Organisms → cellular organisms → Bacteria → Acidobacteria	1344
3300005330|Ga0070690_100034984	All Organisms → cellular organisms → Bacteria	3150

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.61%
Host-Associated	Host-Associated	38.39%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.68%
Plants	Host-Associated → Plants	38.39%
Terrestrial	Environmental → Terrestrial	58.93%

Category

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.00%
Roots	Host-Associated → Plants → Roots	0.89%
Sediment	Environmental → Aquatic → Sediment	2.68%
Soil	Environmental → Terrestrial → Soil	58.93%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.04%
Loam	Environmental → Terrestrial → Soil → Loam	16.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.36%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	7.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0551.00001270	2162886011	Miscanthus Rhizosphere	MKMHSPKFKDPLISRAQPVTLLTPIVEETLRLAGVPPNREQVIERFMSGAPRIGIVHGSEDHPPALGSKETVRRLARSI
MBSR1b_0541.00004340	2162886012	Miscanthus Rhizosphere	MKMHSPKFKDPLISRAQPVTLLTPIVEETLRLAGVPPNREQVIERFMSGAPRIGIVHGSEDHPPALGSKETVR
ICChiseqgaiiDRAFT_05579762	3300000033	Soil	MKMHSPKFKDPLISRAQPVTLLTPIVEEALRSAGVQPNREQVIERFMSGAPRIGIVHGSEDHPPALGSKETVRRLARSIWVNGGIP
JGI1027J12803_1022578082	3300000955	Soil	MHSNKFRDPLISRAQPVTIITPIVDESLRMAGVPALREQILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIPFEVSNSAPCEELSY
Ga0062590_1011578461	3300004157	Soil	MKMHSSKFKDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVIRFIWL
Ga0062592_1003222511	3300004480	Soil	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRRTVRQLWLNGALPFEIAQDVPCEELARGTEGAGYGLLSRNLCTGSLA
Ga0066674_100792943	3300005166	Soil	MISRPQPVTIITPVVEETLRNAGVASVREHVVDRFMSGQPRIAVVHAGEDHPPNVGSKETIRRLIRHIWANGGIPFEM
Ga0066685_110253032	3300005180	Soil	MHSSKHRDPLISRAEPVTIITPVVDETLRMAGVPSIREQILDRFMHGQPRIAVVHGSEDHPPNLGARETIRRIIRQIWANDGIPFEVSQPAPCEELCQGLEGMHYGLLS
Ga0070683_1003809691	3300005329	Corn Rhizosphere	MKMHSSKFKDPLISRAQPVTLIIPLVEEALRTAGIAPNRDFILDHFMNGQPRVAVVHGGDDPNLGMKETIRRVIRFIWLSDALPFEVAQSIPCE
Ga0070690_1000349841	3300005330	Switchgrass Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWANSALPFEIAQDVPCEELARGTDG
Ga0070690_1011178151	3300005330	Switchgrass Rhizosphere	MHSNKFRDPLISRAQPVTIVTPVVEETLRTSGLSVLREQILDRFMNGQSRIAVVHGGDDHPPNVGSKEIIR
Ga0070690_1015516452	3300005330	Switchgrass Rhizosphere	MHSNKFRDPLISRAQPVTIITPIVDETLRLAGVQSAREHILDRFMSGQPRVAVVHGGDDHPPNVGSKETIRRCIRQIWA
Ga0066388_1007286623	3300005332	Tropical Forest Soil	MHSNKFRDPLISRAQPVTIITPVVDETLRTAGVPALREQILDRFMNGQPRIAVVHGGDDHPPNVGAKETIRRLIRQIWANGAIPFEVSNSGPCEELSYGTEGMNY
Ga0066388_1016701671	3300005332	Tropical Forest Soil	MHSNKFRDPLISRAQPVTIITPIVDESLRMAGVPALREQILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIP
Ga0070666_102413392	3300005335	Switchgrass Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGD
Ga0068868_1021398471	3300005338	Miscanthus Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLG
Ga0070661_1000694575	3300005344	Corn Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLW
Ga0070675_1012082342	3300005354	Miscanthus Rhizosphere	MKMHSIKFKDPLISRAQPVTMIVPLVEEALRSAGIVPNRDFILDHFMNGQPRVAVVHGGD
Ga0070673_1005274072	3300005364	Switchgrass Rhizosphere	MHSNKFRDPLISRAQPVTIITPIVDETLRLAGVQSAREHILDRFMSGQPRVAVVHGGDDHPPNVGSKETIRR
Ga0070688_1001742042	3300005365	Switchgrass Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWANSALPFEIAQDVPCEELARGTDGA
Ga0070710_102650262	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHSNKFRDPLINRAQPVTIITPVVDETLRTAGVASVREQILDRFMSGQPRIAVVHGGDDHPPNVGCRETIRRIIRHIWANDAIP
Ga0070694_1011337371	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKE
Ga0070685_100043229	3300005466	Switchgrass Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPSLGM
Ga0070685_100621551	3300005466	Switchgrass Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWANSALPFEIAQDV
Ga0070686_1002153562	3300005544	Switchgrass Rhizosphere	MKMHSSKFRDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVIRFVWLSD
Ga0070665_1013997452	3300005548	Switchgrass Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWANSALPF
Ga0070664_1008901602	3300005564	Corn Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANG
Ga0068859_1023869432	3300005617	Switchgrass Rhizosphere	MRMHSSKFKDALISRAQPITIISPIVEETLRTAGIAPDRERVLELFMSGHPRVAVVHGGDDHPPTLGMKETMRRTVR
Ga0068864_1004831911	3300005618	Switchgrass Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVPCEEL
Ga0066903_1032883112	3300005764	Tropical Forest Soil	MHSNKFRDPLISRAQPVTIITPVVDETLRMAGVPALREQILDRFMNGQPRIAVVHGGDDHPPNVGAKETIRRLIRQIWANGGIPFEVSNSG
Ga0074479_103376041	3300005829	Sediment (Intertidal)	MKMHSSKFKDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVIRFIWLSDALPFEVAQSMPCEELSHGTDTASY
Ga0068870_110235061	3300005840	Miscanthus Rhizosphere	MKMHSIKFKDPLISRAQPVTMIVPLVEEALRSAGIVPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVIRFIWLSDALPFEVAQSIPCEELAQGTETVSYGL
Ga0075422_101683852	3300006196	Populus Rhizosphere	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRRTVRQLWLNGALPFEIAQDVPCEELARGTEGAGYGLLSRNLCT
Ga0097621_1010838111	3300006237	Miscanthus Rhizosphere	MKMHSSKFRDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVIRFVWLSDALPFEVAQSIPCEELSHGTDSASYGLLSRNFCAAML
Ga0075428_1001989354	3300006844	Populus Rhizosphere	MHSNKFRDPLISRAQPVTIVTPVVDETLRRAGASAVREQILDRFMNGQPRIAVVHGGDDHPPNVGLKETIRRMIRQIWANGGI
Ga0075430_1007008321	3300006846	Populus Rhizosphere	MHSNKFRDPLISRAQPVTIITPIVDESLRMAGVQALRDQILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIPFEVSNSAPCEELSYGTEGMNY
Ga0075419_103270972	3300006969	Populus Rhizosphere	MHSNKFRDPLISRAQPVTIIIPIVDESLRMAGVQALRDQILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIPFEVSNSAPCEELSYGTEGMNYALLA
Ga0079218_104091591	3300007004	Agricultural Soil	MRMHSSKFKDALISRAQPVTIISPIVEETLRTAGIAPDRERVFELFMSGHPRVAVVHGGDDHPPSHGMKETIRRTVRQLWVNGALPFEIAQDVPCEELARGTDGANY
Ga0105247_106756442	3300009101	Switchgrass Rhizosphere	MKMHSSKFRDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVIRFVWLSDALPFEVAQSI
Ga0075423_106428652	3300009162	Populus Rhizosphere	MHSNKFRDPLISRAQPVTIIIPIVDESLRMAGVQALRDQILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIPFEVSNSAPCEELSYGTEGMNYALLAR
Ga0105249_115886301	3300009553	Switchgrass Rhizosphere	MHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVPCEELARGT
Ga0126380_119196931	3300010043	Tropical Forest Soil	MKMHSPKFKDPLISRAQPVTLLTPIVEEALRLAGVPPNREQVIERFMSGAPRIGIVHGSEDHPPALGSKET
Ga0126382_122280041	3300010047	Tropical Forest Soil	MKMHASKFKDPWISRAQPVTVVVPLVEEALRNSGVPPRRDLILDYFMNGVPRVAVVHGGDDHPPNAGMRDTIRRVIRGVWLSGALPFEVVQSIPCDELSQ
Ga0126373_124134792	3300010048	Tropical Forest Soil	LSIEQHLAVIVYCAHFVKMHSSKHRDPLISRAQPVTIITPVVDETLRMAGIASIREEILDRFMNGQPRIAVVHGSEDHPQNLGGRETIRRIIRQIWANDAIPFEISQPAPCEELSQGLEGMNYGLLSRNFCT
Ga0134070_102389901	3300010301	Grasslands Soil	MHSNKFKDPMISRPQPVTIITPVVEETLRNAGVASVREHVVDRFMSGQPRIAVVHAGEDHPPNVGSKETIRRLVRHIWANGGIPFEMSQSAPCEEL
Ga0126376_130593261	3300010359	Tropical Forest Soil	MKMHSSKFKDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRIAVVHGGDDHPPNLGMKETIRRVIRFIWLSDALPFEVAQSIPCEELSQGTDNASYGLLSRNF
Ga0134124_117708851	3300010397	Terrestrial Soil	MKMHASKFKDPWISRAQPVTVIVPRVEEALRNSGVSPRRDQILDYFMDGMPRVAVVHGGDDHPPNTGMRDTIRRVIRGVWASEALPFEVVQTIPCEDLSQGTEAANYG
Ga0126383_100276691	3300010398	Tropical Forest Soil	MHSNKFRDPLITRAQPVTIITPIVDESLRMAGVPALREQILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIPFEVSNSAPCEELSYGTEGMN
Ga0134123_123622632	3300010403	Terrestrial Soil	MKMHSSKFKDPLISRAQPVTVITPIVEETLRSAGIAPSRDQILDFFMNGHPRIAAVHGGDDHPPNLGMKETIRRVIRHIWTNGALPF
Ga0134123_129699382	3300010403	Terrestrial Soil	LYNSRTRIKKPEKRMKMHSSKFKDPLISRAQPVTTIIPLVEETLRSAGIVPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVVRFIWLSDALPFEVAQSIPCEELSHGTDTAAYGLLSRNFCAAMLAAQMEA
Ga0105246_114839651	3300011119	Miscanthus Rhizosphere	MKMHSSKFRDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETIRRVIRFVWLSDALPF
Ga0137325_10022831	3300011415	Soil	MKMHSSKLKDPMISRAQPVTVFTPVVEEALRLAGVQPHREQVIERFMSGAPRIVVVHGSEDHPPALGSKEIVRRLVRHIWCCGGVPFEVAQSFPCEELSQGSDAVHYALLSRNFCT
Ga0137423_10060854	3300011430	Soil	MKMHSSKLKDPMISRAQPVTVFTPVVEEALRLAGVQPHREQVIERFMSGAPRIVVVHGSEDHPPALGSKE
Ga0137389_105441772	3300012096	Vadose Zone Soil	MHSSKHRDPLISRAQPVTIITPVVGETLRMAGVPSIREQILDRFMKGQPRIAVVHGSEDHPPNLGARETIRRIIRQIWANDGIPFEVSQSVPAKNCRREAKA*
Ga0137380_115701261	3300012206	Vadose Zone Soil	MSAERMHSSKHRDPLISRAEPVTIITPVVDETLRMAGVPSVREQIIDRFMNGQPRIAVVHGSEDHPPNLGARETIRRIIRQIWANDGIPFEVSQSVPCEELSQGLEG
Ga0137398_103025291	3300012683	Vadose Zone Soil	MKMHSSKFKDPLISRAQPVAVILPLVEESLRSAGVSPNRDLILDYFMNAHPRIAVIHGGDDHPPNLGMKDTIRRVIRFIWASEALPFEMVQS
Ga0157309_101833481	3300012895	Soil	MHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPSLGMKETIRRTVRQLWANGALP
Ga0157306_100422901	3300012912	Soil	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRRTVRQLWLNGALPFEIAQDVPCEELARGTEGAGYGL
Ga0137395_101653974	3300012917	Vadose Zone Soil	MKMHSSKFKDPLISRAQPVAVILPLVEESLRNSGASPNRDLILDYFMNAHPRIAVIHGGDDHPPNLGMKDTIRRVIRFIWASEALPFEMVQSFPCEE
Ga0164302_113426381	3300012961	Soil	MHSNKFRDPLISRAQPVTIITPIVDESLRMAGVPALREQILDRFMDGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIPFEVSNSAPCEELSYGTEG
Ga0126369_119015541	3300012971	Tropical Forest Soil	MHSNKFRDPLISRAQPVTIITPVVDETLRRSGVPALREQILERFMTGHPRIAVVHGGDHHPPNVGMKE
Ga0163162_105210601	3300013306	Switchgrass Rhizosphere	MHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWANSALPFEIAQDVPCEE
Ga0163162_130741852	3300013306	Switchgrass Rhizosphere	MHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVPCEELARGTDGANYGLLSRNLCTGSLAAH
Ga0075326_11426321	3300014271	Natural And Restored Wetlands	MKMHSSKFKDPLISRAQPVTIISPIVEETLRSAGIAPDRDRILELFMNGHARVAVVHAGDDHPP
Ga0157380_115273622	3300014326	Switchgrass Rhizosphere	MHSSKFKDALISRAQPITIISPIVEETLRTAGIAPDRERVLELFMSGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWANNALPFEISQDVPCEELARGTDGA
Ga0157380_116458292	3300014326	Switchgrass Rhizosphere	MKMHSSKFKDPLISRAQPVTIISPIIEETLRTAGVVPNRDQILEFFMNAHPRIAVSTVETIILRTSG*
Ga0157379_112928271	3300014968	Switchgrass Rhizosphere	MKMHSSKFKDPLISRAQPVTLIIPLVEEALRTAGIAPNRDFILDHFMNGQPRVAVVHGGDDPNLGMKETIRRVIRFIWLSDALPFEVAQ
Ga0157379_123867051	3300014968	Switchgrass Rhizosphere	MHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVP
Ga0173483_107879242	3300015077	Soil	MHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPF
Ga0173478_100465871	3300015201	Soil	MHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVPCEELARGTDGANYGLL
Ga0132258_107644191	3300015371	Arabidopsis Rhizosphere	MHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMGGHPRVAVVHGGDDHPPSLGMKETMRRTVRQLWANSALPFEIAQDVP
Ga0132258_136853392	3300015371	Arabidopsis Rhizosphere	MKMHSSKFKDPLISRAQPVTLIIPMVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDPNLGIKETIRRVIRFIWLSDALPFEVAQSIPCEELSYGTDTASYGLLSRNFCSAMLAAQ
Ga0132256_1022100672	3300015372	Arabidopsis Rhizosphere	MKMHSSKFKDPLISRAQPVTIISPIIEETLRSAGIAPDRERILELFMDGHPRVAVVHGGDDHPPTLGMKESVRRTVRQLWANRALPFEISQDVPCEELSRGTDGAGYGLLSRNLCTGSLAAHMEA
Ga0132256_1023818412	3300015372	Arabidopsis Rhizosphere	MHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMGGHPRVAVVHGGDDHPPS
Ga0182036_114817831	3300016270	Soil	MHSSKFRDPLISRAQPVTIITPVVDETLRIAGVPAMREQILDRFMNGQPRIAVVHGAEDHPPNVGGRETIRRIIRQIWANDAIPF
Ga0182041_117059542	3300016294	Soil	MHSNKFRDPLISRAQPVTIITPIVDETLRMAGVPAIREEILDRFMNGQPRIAVVHGGDDHPPNVGSKE
Ga0182033_111688752	3300016319	Soil	MHSNKFRDPLISRAQPVTIITPIVDETLRMAGVSAVREEILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRM
Ga0182035_107210362	3300016341	Soil	MHSSKFRDPLISRAQPVTIITPVVDETLRIAGVPAMREQILDRFMNGQPRIAVVHGAEDHPPNVGGRETIRRIIRWIWAN
Ga0182040_109775481	3300016387	Soil	MHSSKFRDPLISRAQPVTIITPVVDETLRIAGVPAMREQILDRFMNGQPRIAVVHGAEDHPPNVGGRETIRRIIRWIWANDAIPFEVSQSSPCEELSQGLE
Ga0190271_114917042	3300018481	Soil	MRMHSSKYKDALISRAQPVTIISPIVEETLRTAGIAPDRERILELFMSGHPRVAVVHGGDDHPPSLGMKETIRRTVRQLWANHALPFEISQDVPCEELARGTDGANYGLLTRNLCTNSLAAHMEAH
Ga0173482_104463181	3300019361	Soil	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVPC
Ga0209109_102498652	3300025160	Soil	MRMHSSKFKDPLISRAEPVTIISPIVEETLRSAGIVPDRERILELFMGGHPRVAVVHGGDDHPPSLGMKETIKRTVRQLWLNRALPFEIAQKCVDDLVMVTDEEIISALEKK
Ga0207697_102465662	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVLCARSCATLLLAAFELAID
Ga0209520_107258441	3300025319	Soil	MHSSKFKDPLISRAEPVTIISPIVEETLRSAGILPDRERILELFMGAHPRVAVVHGGDDHPPSLGMKETIKRTVRQLW
Ga0207692_105873441	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MHSNKFRDPLINRAQPVTIITPVVDETLRTAGVASVREQILDRFMSGQPRIAVVHGGDDHPPNVGCRETIRRIIRHIWANDAIPFEVSQSA
Ga0207650_105942711	3300025925	Switchgrass Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMSGHPRVAVVHGGDDHPPTLGMKETMRRTIRQLWANSALPFEIAQDVPCEELARGTDGAN
Ga0207659_109936601	3300025926	Miscanthus Rhizosphere	MKMHSIKFKDPLISRAQPVTMIVPLVEEALRSAGIVPNRDFILDHFMNGQPRVAVVHGGDDHPP
Ga0207670_115648902	3300025936	Switchgrass Rhizosphere	MHSNKFRDPLISRAQPVTIITPIVDETLRLAGVQSPREHILDRFMSGQPRVAVVHGGDDHPPNVGSKETIRRCIRQIWANGGIPFEVSHSAPCEELSYGTEG
Ga0207669_105447302	3300025937	Miscanthus Rhizosphere	MRMHSSKFKDALISRAQPITIISPIVEETLRTAGIAPDRERVLELFMSGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWAN
Ga0207679_108226731	3300025945	Corn Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGAL
Ga0207651_117548171	3300025960	Switchgrass Rhizosphere	MHSNKFRDPLISRAQPVTIVTPVVEETLRTSGLSVLREQILDRFMNGQSRIAVVHGGDDHPPNVGSKEIIRRTIRQIPA
Ga0207712_114116761	3300025961	Switchgrass Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLG
Ga0207708_114339091	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQLWANSALPFE
Ga0207708_118406731	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKMHSSKFKDPLISRAQPVTVISPIVEETLRSAGVAPNRDQILDHFMNGHPRIAVVHGGDDHPPNLGMKETIRRVIRHIWTNGALPFEISQDIPCE
Ga0207676_106146351	3300026095	Switchgrass Rhizosphere	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERILELFMSGHPRVAVVHGGDDHPPTLGMKETIRRTVRQLWANGALPFEIAQDVPCEELA
Ga0207683_118197582	3300026121	Miscanthus Rhizosphere	MKMHSSKFKDPLISRAQPITIISPIVVETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRR
Ga0209118_11754562	3300027674	Forest Soil	MHSSKHRDPLISRAQPVTIITPVVDETLRMAGVPSVREQILDRFMSGQARIAVVHGSEDHPPNLGARETIRRIIRQIWANDGIPFEVSLSAPCEELSQGLEGM
Ga0209465_106035162	3300027874	Tropical Forest Soil	MHSNKFRDPLISRAQPVTIVVPLVDETLRMAGVPSVREQILDRFMNGHPRLAVVHGGDDHPPNVGSKETIRRIIRQIWANG
Ga0209974_103300032	3300027876	Arabidopsis Thaliana Rhizosphere	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRRTVRQLWLNGALPFEIAQDVPCEELARGTEGAGYGLLSRNLCTGSLAAHMEA
Ga0209481_102031861	3300027880	Populus Rhizosphere	MHSNKFRDPLISRAQPVTIIIPIVDESLRMAGVQALRDQILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIRQIWANGAIPFEVSNSAPCEELSYGTEGMNYALLARN
Ga0247663_10853322	3300028145	Soil	MKMHSSKFKDPLISRAQPVTMIIPLVEEALRSAGIAPNRDFILDHFMNGQPRVAVVHGGDDHPPNLGMKETI
Ga0268266_113718822	3300028379	Switchgrass Rhizosphere	MRMHSSKYKDALISRAQPVTIISPIVEETLRSAGIAPDRERILQLFMEGHPRVAVVHGGDDHPPTLGMKETMRRTVRQ
Ga0310887_100522923	3300031547	Soil	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKDTIR
Ga0310900_101912853	3300031908	Soil	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRRTIRQLWLNGALPFEIAQDVPCE
Ga0310900_110004762	3300031908	Soil	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERIMELFMSGHPRVAVVHGGDDHPPSLGMKETIRRTVRQLWANGALPFEIAQDVP
Ga0310885_108231762	3300031943	Soil	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRRTIRQLWLNGALPFEIAQDVPCEDLARGTEGAGYGLLSRNLCTGSLA
Ga0306926_121190512	3300031954	Soil	MHSNKFRDPLISRAQPVTIITPIVDETLRMAGVSAVREEILDRFMNGQPRIAVVHGGDDHPPNVGSKETIRRMIR
Ga0306922_117873512	3300032001	Soil	VTIITPVVDETLRMAGMPSIREEILDRFMNGQPRIAVVHGSEDHPPNLGARETIRRIIRQIWANDAIPFEISQPAPCEELSQGLEGMN
Ga0310897_105658442	3300032003	Soil	MRMHSSKFKDALISRAQPVTIISPIVEETLRSAGIAPDRERIMELFMSGHPRVAVVHGGDDHPPSLGMKETIRRTVRQLWANGALPFEIAQDVPCEELARGTDGANYGLLSRNLCTGSLAAHMEA
Ga0310906_108609041	3300032013	Soil	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRR
Ga0310889_107496532	3300032179	Soil	MKMHSSKFKDPLISRAQPITIISPIVEETLRSAGVPPDRERVMELFMSGHPRVAVVHGGDDHPPSIGMKETIRRTIR
Ga0306920_1001059221	3300032261	Soil	MHSSKFRDPLISRAQPVTIITPVVDETLRIAGVPAMREQILDRFMNGQPRIAVVHGAEDHPPNVGGRETIRRIIRWIWANDAIPFEVSQSSP