Metagenome / Metatranscriptome Family F084275

Basic Information
Family ID	F084275
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	43 residues
Representative Sequence	VSQLDKELRERIDEPASEEAEREARLTPAEAVAQMRIKVPAQR
Number of Associated Samples	100
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.54 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.07 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (77.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.536 % of family members)
Environment Ontology (ENVO)	Unclassified (25.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.536 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.58% β-sheet: 0.00% Coil/Unstructured: 70.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01638	HxlR	36.61
PF00005	ABC_tran	10.71
PF06271	RDD	4.46
PF00664	ABC_membrane	3.57
PF07687	M20_dimer	3.57
PF10110	GPDPase_memb	2.68
PF01546	Peptidase_M20	2.68
PF04775	Bile_Hydr_Trans	2.68
PF04055	Radical_SAM	1.79
PF12911	OppC_N	0.89
PF04545	Sigma70_r4	0.89
PF14333	DUF4389	0.89
PF00916	Sulfate_transp	0.89
PF13365	Trypsin_2	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	36.61
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	4.46
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.89
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.89
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.96 %
Unclassified	root	N/A	22.32 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66.07 %
Unclassified	root	N/A	22.32 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.89 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	26.79 %
Unclassified	root	N/A	22.32 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.71 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.89 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.89 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.89 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	25.00 %
Unclassified	root	N/A	22.32 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.89 %
unclassified Planctomycetia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	4.46 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	2.68 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.89 %
unclassified Nitriliruptorales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales	0.89 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	4.46 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.79 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.89 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.89 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.89 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4.46 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.79 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.89 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.89 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.89 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.71 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4.46 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.79 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.89 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.89 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.89 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_112365474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1025	Open in IMG/M
3300002568\|C688J35102_119225295	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300004157\|Ga0062590_101325386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	711	Open in IMG/M
3300005093\|Ga0062594_101230154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300005172\|Ga0066683_10646142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300005175\|Ga0066673_10763393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300005338\|Ga0068868_100909219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300005437\|Ga0070710_11430629	Not Available	518	Open in IMG/M
3300005447\|Ga0066689_10721075	Not Available	623	Open in IMG/M
3300005455\|Ga0070663_101882182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300005457\|Ga0070662_101795969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	530	Open in IMG/M
3300005530\|Ga0070679_100276948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1631	Open in IMG/M
3300005546\|Ga0070696_100735384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	807	Open in IMG/M
3300005546\|Ga0070696_100861639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300005561\|Ga0066699_10778228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	676	Open in IMG/M
3300005566\|Ga0066693_10067718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1231	Open in IMG/M
3300005576\|Ga0066708_10077705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1926	Open in IMG/M
3300005618\|Ga0068864_100316399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1465	Open in IMG/M
3300005764\|Ga0066903_100288342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2582	Open in IMG/M
3300005843\|Ga0068860_102048216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300005844\|Ga0068862_101909718	Not Available	604	Open in IMG/M
3300005937\|Ga0081455_10250037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300005985\|Ga0081539_10469713	Not Available	521	Open in IMG/M
3300006058\|Ga0075432_10064021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1313	Open in IMG/M
3300006358\|Ga0068871_102378262	Not Available	505	Open in IMG/M
3300006573\|Ga0074055_11797813	Not Available	612	Open in IMG/M
3300006791\|Ga0066653_10495585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300006903\|Ga0075426_10521180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300006903\|Ga0075426_10868455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300009137\|Ga0066709_101809862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300009662\|Ga0105856_1359647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300009789\|Ga0126307_10150403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1863	Open in IMG/M
3300009792\|Ga0126374_11735145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300010038\|Ga0126315_10260511	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300010045\|Ga0126311_10002831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8806	Open in IMG/M
3300010045\|Ga0126311_10454476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300010325\|Ga0134064_10198281	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300010360\|Ga0126372_11748236	Not Available	664	Open in IMG/M
3300010366\|Ga0126379_10107115	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300011119\|Ga0105246_11883441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300012208\|Ga0137376_11170449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	657	Open in IMG/M
3300012358\|Ga0137368_10373936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300012359\|Ga0137385_11465258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	546	Open in IMG/M
3300012476\|Ga0157344_1006050	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300012489\|Ga0157349_1029891	Not Available	563	Open in IMG/M
3300012507\|Ga0157342_1006720	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300012532\|Ga0137373_10769399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300012899\|Ga0157299_10027743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1129	Open in IMG/M
3300012915\|Ga0157302_10081130	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012960\|Ga0164301_10435559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	928	Open in IMG/M
3300013768\|Ga0120155_1061813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300014157\|Ga0134078_10281174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	709	Open in IMG/M
3300014968\|Ga0157379_10044596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3958	Open in IMG/M
3300015372\|Ga0132256_101104303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	907	Open in IMG/M
3300015372\|Ga0132256_101732495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300017659\|Ga0134083_10386150	Not Available	608	Open in IMG/M
3300017965\|Ga0190266_10004922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2984	Open in IMG/M
3300017997\|Ga0184610_1056332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1173	Open in IMG/M
3300018000\|Ga0184604_10320857	Not Available	549	Open in IMG/M
3300018029\|Ga0187787_10178483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300018072\|Ga0184635_10315547	Not Available	608	Open in IMG/M
3300018433\|Ga0066667_10068810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2228	Open in IMG/M
3300018433\|Ga0066667_10795930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	803	Open in IMG/M
3300019869\|Ga0193705_1077906	Not Available	643	Open in IMG/M
3300019873\|Ga0193700_1022015	Not Available	1052	Open in IMG/M
3300021073\|Ga0210378_10149094	Not Available	903	Open in IMG/M
3300021418\|Ga0193695_1063700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300022694\|Ga0222623_10047745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1646	Open in IMG/M
3300024177\|Ga0247686_1009207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042	Open in IMG/M
3300024325\|Ga0247678_1049888	Not Available	676	Open in IMG/M
3300025916\|Ga0207663_11590984	Not Available	526	Open in IMG/M
3300025921\|Ga0207652_10306811	Not Available	1433	Open in IMG/M
3300025921\|Ga0207652_11705213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300025929\|Ga0207664_11635786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	566	Open in IMG/M
3300025972\|Ga0207668_10498748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1047	Open in IMG/M
3300026023\|Ga0207677_10400418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1164	Open in IMG/M
3300026035\|Ga0207703_11508685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300026078\|Ga0207702_10967462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	844	Open in IMG/M
3300026089\|Ga0207648_10856326	Not Available	848	Open in IMG/M
3300026315\|Ga0209686_1158373	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300026542\|Ga0209805_1241611	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300027056\|Ga0209879_1002820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2505	Open in IMG/M
3300028381\|Ga0268264_10809524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	936	Open in IMG/M
3300028589\|Ga0247818_11227130	Not Available	536	Open in IMG/M
3300028707\|Ga0307291_1010459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2015	Open in IMG/M
3300028707\|Ga0307291_1082009	Not Available	795	Open in IMG/M
3300028707\|Ga0307291_1100660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	720	Open in IMG/M
3300028708\|Ga0307295_10028390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1395	Open in IMG/M
3300028711\|Ga0307293_10157970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	721	Open in IMG/M
3300028719\|Ga0307301_10036058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1497	Open in IMG/M
3300028719\|Ga0307301_10097524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300028778\|Ga0307288_10135283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300028796\|Ga0307287_10033455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843	Open in IMG/M
3300028819\|Ga0307296_10335722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300028819\|Ga0307296_10463212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300028824\|Ga0307310_10334249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300028881\|Ga0307277_10164110	Not Available	966	Open in IMG/M
3300028884\|Ga0307308_10519159	Not Available	571	Open in IMG/M
3300030336\|Ga0247826_11421171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300031421\|Ga0308194_10099172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300031525\|Ga0302326_11190267	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	1050	Open in IMG/M
3300031720\|Ga0307469_12487204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300031731\|Ga0307405_11768692	Not Available	549	Open in IMG/M
3300031938\|Ga0308175_100102670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2637	Open in IMG/M
3300031938\|Ga0308175_100185248	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300031938\|Ga0308175_102604788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300031962\|Ga0307479_10290025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1618	Open in IMG/M
3300032205\|Ga0307472_101247088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300032828\|Ga0335080_11996150	Not Available	562	Open in IMG/M
3300033158\|Ga0335077_11313639	Not Available	702	Open in IMG/M
3300033475\|Ga0310811_10639318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1053	Open in IMG/M
3300034678\|Ga0314803_084931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.68%
Host-Associated	Host-Associated	22.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.21%
Plants	Host-Associated → Plants	22.32%
Aquatic	Environmental → Aquatic	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.82%
Sediment	Environmental → Aquatic → Sediment	3.57%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.61%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084275

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1123654743	3300000956	Soil	VSELDSETQERIEDPVSEQAEEETRLTPAEAVAQMRIKVP
C688J35102_1192252953	3300002568	Soil	VSELDKELQERIDEPASEEAEREARLAPADAVAQMRIKVPAQRSRKL
Ga0062590_1013253863	3300004157	Soil	VSQLDKELRERIDEPASEEAEREARLSPAEAVAQMRIKVPAQRSRK
Ga0062594_1012301542	3300005093	Soil	VAPLDKELRERIDEPASEEAEREARLSPQDAVAKMRIKVP
Ga0066683_106461421	3300005172	Soil	VSELDKELQERIDEPASPEAERDARLSPREATAQMRINVPAQRNAKL
Ga0066673_107633931	3300005175	Soil	VSEIDNELRERIDEPASKEAEREAQLSPAEAVAQMRINVP
Ga0068868_1009092191	3300005338	Miscanthus Rhizosphere	VSELDKETQERIEDPVSEQAEEETRLTPAEAVAQMRIKVPTR
Ga0070710_114306291	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSQLDKELRERIDEPASEEAEREARLSAAEAVAQMRIKVPAQRSKKLR
Ga0066689_107210751	3300005447	Soil	VSQIDKELRERIDEPASEEAEREARLTPAEATAQMRINVPAQRSRKLR
Ga0070663_1018821821	3300005455	Corn Rhizosphere	MSDDESELDPETRGRIDGPISAEAERETRLTPAEAVKQMRIRVP
Ga0070662_1017959692	3300005457	Corn Rhizosphere	VSELDKETQERIEDPVSEQAEEETHLTPAEAVAQMRIKVPTRANRKLATLV
Ga0070679_1002769481	3300005530	Corn Rhizosphere	VSQLDKELRERIDEPVSPEAEREARLSPEEAVAQMRIKVPAQRSRKLR
Ga0070696_1007353841	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VAPLDKELRERIDEPASEEAEREARLSPQDAVAKMRIKVPAQ
Ga0070696_1008616391	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSRLDKELRERIDEPASQEAEREARLTPAEATAQMRIKVPAQRNAKLRT
Ga0066699_107782283	3300005561	Soil	VSQLDKELRARIEEPASEEAEREARLSPTEATAQMRINVPAQRNRKL
Ga0066693_100677181	3300005566	Soil	VSQLDKSQLDKELRDRIDEPASEEAEREARLTPAEAVAQMRINVP
Ga0066708_100777051	3300005576	Soil	VSEIDKELRERIDEPASKEAEREAQLSPAEAVAQMRINV
Ga0068864_1003163993	3300005618	Switchgrass Rhizosphere	VSQLDKELRERIDEPASDEAEREARLSPAEAVAQMRIKVPAQRNRK
Ga0066903_1002883421	3300005764	Tropical Forest Soil	VSQLDKELRERIEEPASGEAEREARLTPKEAVAKMRIKVP
Ga0068860_1020482163	3300005843	Switchgrass Rhizosphere	VSQLDKELRERIDEPASDEAEREARLSPAEAVAQM
Ga0068862_1019097181	3300005844	Switchgrass Rhizosphere	VSQLDKELRERIEEPASGEAEREARLTPRDAVAQMRIK
Ga0081455_102500372	3300005937	Tabebuia Heterophylla Rhizosphere	MSEVDPEAEARIEDPVSKEAEREVLLTPQEAVSRMRIKVPPRANRKLRELLERVN
Ga0081539_104697131	3300005985	Tabebuia Heterophylla Rhizosphere	VSQVDKELRERIDEPASREAEREARLSPADATAQMRINVPAQRSRK
Ga0075432_100640213	3300006058	Populus Rhizosphere	VSELDKETRERIEDPVSEQAEEETRLTPAEAVAQM
Ga0068871_1023782622	3300006358	Miscanthus Rhizosphere	VSDPDPESGLDSRTQERIDEPVSAEAARETRLTPKEAVAQMRIRVP
Ga0074055_117978131	3300006573	Soil	VSQLDKELQERIDEPASAQAVKETRLTPAEATAQMRINV
Ga0066653_104955851	3300006791	Soil	VSEIDKELRQRIDEPASEEAEREAQLSPAEAIAQMRINVPAQRSRKLR
Ga0075426_105211802	3300006903	Populus Rhizosphere	VAPLDKELRERIDEPASEEAEREARLSPQDAVAKMRI
Ga0075426_108684551	3300006903	Populus Rhizosphere	VSELDPKTQERIDEPVSAEAERETRLTPSEAVKQMRIRVP
Ga0066709_1018098621	3300009137	Grasslands Soil	VSELDPKTQERIDEPVSAEAERETRLTPEQAVKQMRIRVPD
Ga0105856_13596472	3300009662	Permafrost Soil	VTLDKKTQQRIDNPVPDEAQREARLTPTAAVAQMRIRLPE
Ga0126307_101504031	3300009789	Serpentine Soil	MALDKETEARIEQPVSDEAERETRLTPAQAVGAMRINVPPRANRKLR
Ga0126374_117351451	3300009792	Tropical Forest Soil	MSELGKELRERIDEPVSREAEREAQLSPDEAVAQMRIKVPA
Ga0126315_102605113	3300010038	Serpentine Soil	VSQLDKELRERIDEPASGEAEREARLAPADATAQMRIKVPAQRNRKLR
Ga0126311_1000283111	3300010045	Serpentine Soil	VSQLDKELRERIDEPASEEAEREARLAPGDAVAQMRIKVPAQRSRKLRTLLERVNGDDGL
Ga0126311_104544763	3300010045	Serpentine Soil	MSELDKETQERIEDPVSEQAEEETHLTPAEAVAQMRIKVP
Ga0134064_101982811	3300010325	Grasslands Soil	VSQLDKGLRERIDEPASEEAEREALLSPAEATAQMRINVPAQRSRKLRAIRERVNA
Ga0126372_117482363	3300010360	Tropical Forest Soil	VARLDKELRERIDEPVSEEAERDALLTPAEATAQMRINVPAQ
Ga0126379_101071154	3300010366	Tropical Forest Soil	VSQLDPELRERIDEPVSREAEREAQLSPDDAVAQMRIKVPAERSRKLRTIVERV
Ga0105246_118834411	3300011119	Miscanthus Rhizosphere	VSELDKETQERIEDPVSEQAEEETRLTPAEAVAQMRIK
Ga0137376_111704493	3300012208	Vadose Zone Soil	VSELDKELQERIDEPASPEAEREARLSPREATAQMRINVPAQRN
Ga0137368_103739363	3300012358	Vadose Zone Soil	MAELDKETQERIDEPVSEQAEEETRLTPAEAVAQMRIRVPPR
Ga0137385_114652581	3300012359	Vadose Zone Soil	MTDDQTELDEETRELITGPVSAEAERETRLTPTEAVAQMRIRVPV
Ga0157344_10060501	3300012476	Arabidopsis Rhizosphere	VARLDKELRERIDDPVSAEAERETLLTPAEATAQMRIKVPAQRNA
Ga0157349_10298912	3300012489	Unplanted Soil	VARLDKELRERIDDPVSAEAERETLLTPAEATAQMRIKVPAQRNAKLRTVL
Ga0157342_10067201	3300012507	Arabidopsis Rhizosphere	VARLDKELRERIDDPVSAEAERETLLTPAEATAQMRIKVPAQRNAKLRTVLER
Ga0137373_107693992	3300012532	Vadose Zone Soil	MALDPETRERIESPTSAEAEREARLTPAQAVSQMRIRVPERAN
Ga0157299_100277433	3300012899	Soil	VSELDKETRDRIEDPVSEQAEEETRLTPAEAVAQMRIKVPTRG
Ga0157302_100811303	3300012915	Soil	VSELDKETQERIEDPVSEQAEEETHLTPAEAVAQMRIKVPPRANR
Ga0164301_104355593	3300012960	Soil	MSLDPETEKRIEQPASDEAERETRLTPAEAVKQMRIRVPVRAN
Ga0120155_10618133	3300013768	Permafrost	VSQLDKELRERIDEPVSEEAERETRLTPADATAQMRI
Ga0134078_102811743	3300014157	Grasslands Soil	VSQLDKGLRERIDEPASEEAEREALLSPAEATAQMRINVPAQRSRKL
Ga0157379_100445964	3300014968	Switchgrass Rhizosphere	VSELDKETQERIDDPVSEQAEEETRLTPAEAVAQMRIKVP
Ga0132256_1011043032	3300015372	Arabidopsis Rhizosphere	VSQLDKELRERIDEPVSPEAEREARLSPEEAVAQMRIKV
Ga0132256_1017324952	3300015372	Arabidopsis Rhizosphere	MALDPETQEIIDDPVPAEAERETRLRPKEAVALMRIRVPERG
Ga0134083_103861502	3300017659	Grasslands Soil	VSQLDKELRERIDEPASPEAEREARLSPREAAAQMRINVPAQRNAK
Ga0190266_100049224	3300017965	Soil	VSDLDKETQERIQDPVSEQAEEETHLTPAEAVAQMRIKVPPRAN
Ga0184610_10563323	3300017997	Groundwater Sediment	MAELDKETQERIDEPVSEQAEEETRLTPAEAVAQMRIRVPPRANRKLA
Ga0184604_103208571	3300018000	Groundwater Sediment	VSQLDKELQERIDEPASEEAERETRLTPGEATAQM
Ga0187787_101784832	3300018029	Tropical Peatland	MSELDPETRERITEPISAEAARETRLTPSQAVAQMRIRVPERG
Ga0184635_103155471	3300018072	Groundwater Sediment	VSQLDKELRERIEEPASDEAEREARLTPRDAVAQMRIKVPA
Ga0066667_100688101	3300018433	Grasslands Soil	VSEIDKELRERIDEPASKEAEREAQLSPVEAVAQMRINVPAQRSRKLR
Ga0066667_107959301	3300018433	Grasslands Soil	VSQLDKSQLDKELRERIDEPVSEEAEREARLTPAEATAQM
Ga0193705_10779063	3300019869	Soil	VSQLDKELQERIDEPASEEAERETRLTPAEATAQMRIKVPAQRNA
Ga0193700_10220151	3300019873	Soil	VSQLDKELQERIDEPASEEAERETRLTPAEATAQMRIKVPAQR
Ga0210378_101490943	3300021073	Groundwater Sediment	VSQLDKELQERIDEPASEEAERETRLTPAEATAQMRIKVPAQRNAKL
Ga0193695_10637001	3300021418	Soil	VSELDPKTQERIDEPVSAEAERETRLTPAQAVKQMRIRVPDRGHQK
Ga0222623_100477451	3300022694	Groundwater Sediment	MAELDKETQERIDEPVSEQAEEETRLTPAEAVAQMRIRVPPRANRKL
Ga0247686_10092071	3300024177	Soil	VSQLDKELRERIDEPVSPEAEREARLSPEEAVAQMRIKVPAQRS
Ga0247678_10498883	3300024325	Soil	VSQLDREIRERIDEPASKEAEREARLSPADAVAQMRIKVPAQRS
Ga0207663_115909842	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPETEKRIDQPVSAEAEREVRLTPAEAVAQMRIRVPVRA
Ga0207652_103068112	3300025921	Corn Rhizosphere	MSEIDPELRERIDEPASEEAERDARLTPAEAVGQMRINVPAQ
Ga0207652_117052131	3300025921	Corn Rhizosphere	VSRLDKELRERIDEPASQEAEREARLTPAEATAQM
Ga0207664_116357862	3300025929	Agricultural Soil	MGLDPQTEKRIEQPASDEAERETRLTPAEAVQQMRIRVPVRA
Ga0207668_104987481	3300025972	Switchgrass Rhizosphere	VSELDKETQERIEDPVSEQAEEETHLTPAEAVAQMRIKVP
Ga0207677_104004183	3300026023	Miscanthus Rhizosphere	VSELDKETQERIEDPVSEQAEEETRLTPAEAVAQMRIKV
Ga0207703_115086851	3300026035	Switchgrass Rhizosphere	VALDEETQQLDAETQQGIDEPVPEEAKRETRLTPAEAVAQMRIRV
Ga0207702_109674622	3300026078	Corn Rhizosphere	MTEIDPASEIDQELRERIDEPASEEAERDARLTPAEAVGQMRINVPA
Ga0207648_108563261	3300026089	Miscanthus Rhizosphere	VSELDKETQERIEDPVSEQAEEETRLTPAEAVAQMRIKVPTRAN
Ga0209686_11583733	3300026315	Soil	VSQLDKELRERIEEPASEEAEREARLSPTEATAQMR
Ga0209805_12416113	3300026542	Soil	VSQLDKELRARIEEPASEEAEREARLSPTEATAQMRINVPAQRNRK
Ga0209879_10028201	3300027056	Groundwater Sand	MAELDKETQERIDEPVSEQAEEETRLTPAEAVAQMRIRVP
Ga0268264_108095243	3300028381	Switchgrass Rhizosphere	VSQLDKELRERIDEPASDEAEREARLSPAEAVAQMR
Ga0247818_112271302	3300028589	Soil	VALDEETQQLDAETQQRIDEPVPEEAKRETRLTPAEAVAQM
Ga0307291_10104591	3300028707	Soil	VSELDKETRDRIEDPVSEQAEEETRLTPAEAVAQMRIKV
Ga0307291_10820091	3300028707	Soil	VSQLDKELQERIDEPVAEEAERETRLTPAEATSQMRI
Ga0307291_11006601	3300028707	Soil	VSQLDKELRERIDEPASEEAEREARLAPADATAQMRI
Ga0307295_100283901	3300028708	Soil	VSQLDKELQERIDEPASEEAERETRLTPAEATAQMRIK
Ga0307293_101579703	3300028711	Soil	VSGAVSQLDKELRERIDEPASEEAEREARLSPADATAQMRIKVPAQRNRKL
Ga0307301_100360581	3300028719	Soil	VSELDKETQERIQDPVSEQAEEETRLTPAEAVAQMRIKVPTRANRKL
Ga0307301_100975241	3300028719	Soil	MAELDKETQERIDEPVSEQAEEETRLTPAEAVAQMRIRVPPRANRKLAA
Ga0307288_101352832	3300028778	Soil	VSELDKETRDRIEDPVSEQAEEETRLTPAEAVAQMRIKVPTRANRKLAM
Ga0307287_100334551	3300028796	Soil	VSRLDKELRERIDEPASQEAEREARLTPVEATAQMR
Ga0307296_103357221	3300028819	Soil	MAELDKETQERIDEPVSEQAEEETRLTPAQAVAQMRIRVPPRANRKL
Ga0307296_104632122	3300028819	Soil	VSRLDKELRERIDEPASQEAEREARLTPVEATAQMRIKVPAQR
Ga0307310_103342491	3300028824	Soil	VSQLDKELRERIDEPASEEAEREARLTPAEAVAQMRIKVPAQR
Ga0307277_101641101	3300028881	Soil	VSAAVSQLDKELRERIDEPASKEAEREARLAPAEATAQMRIKLPAQRNAKLRNVVER
Ga0307308_105191591	3300028884	Soil	VSGAVSQLDKELRERIDEPASEEAERDARLSPADATAQMRIRVPAQRNRK
Ga0247826_114211711	3300030336	Soil	VARLDKELRERIDEPASQEAEREARLTPAEATAQMRIKVPAQRN
Ga0308194_100991721	3300031421	Soil	MAELDKETQERIDEPVSEQAEEEARLTPAEAVAQMRI
Ga0302326_111902672	3300031525	Palsa	VELDKETQDRIDSPTSEEAKREARLTPAEAVGQIRIRLPER
Ga0307469_124872041	3300031720	Hardwood Forest Soil	VSELDKETQERIEDPVSEQAEEETHLTPAEAVAQM
Ga0307405_117686921	3300031731	Rhizosphere	VFVSELDKETQERIEDPVSEQAEEETRLTPAEAVAQMRIKVPT
Ga0308175_1001026704	3300031938	Soil	MSDDETQLDPETRERIAAPASAEAERETRLTPAEAVKQMRIRVPV
Ga0308175_1001852481	3300031938	Soil	VARLDKELRERIDEPASQEAEREVRLTPAEATAQMRI
Ga0308175_1026047881	3300031938	Soil	VSPLDKELRERIDEPASEEAEREARLSPGEAVAKMR
Ga0307479_102900251	3300031962	Hardwood Forest Soil	VSELDSKTQGRIDDPVSAEAERETRLAPAEAIKQMRIRV
Ga0307472_1012470882	3300032205	Hardwood Forest Soil	VSELDKETQERIEDPVSEQAEEETHLTPAEAVAQMRIKVPTRANRKLA
Ga0335080_119961501	3300032828	Soil	VTELDRELQERIDEPASAEAVQETRLTPAEATAQMRINVPAQRNR
Ga0335077_113136393	3300033158	Soil	VTELDRELQERIDEPASAEAVQETRLTPAEATAQMRINVPAQRN
Ga0310811_106393183	3300033475	Soil	VSQLDKELRERIEEPASGEAEREARLTPRDAVAQM
Ga0314803_084931_462_599	3300034678	Soil	MSELDRETQERIEDPVSEQAEEETRLTPAEAVTQMRIKVPTRANRK

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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