Metagenome / Metatranscriptome Family F084221

Basic Information
Family ID	F084221
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	57 residues
Representative Sequence	MSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR
Number of Associated Samples	80
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	16.96 %
% of genes from short scaffolds (< 2000 bps)	67.86 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (50.000 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (16.071 % of family members)
Environment Ontology (ENVO)	Unclassified (47.321 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (59.821 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1FwDRAFT_102054033 2JGI24219J26650_10250732 3JGI24766J26685_100737952 4JGI25908J49247_1000010112 5JGI25909J50240_10677422 6Ga0065166_100857784 7Ga0069718_153662912 8Ga0069718_154443082 9Ga0049081_101675142 10Ga0049081_102741802 11Ga0049080_100368764 12Ga0078894_100092855 13Ga0078894_100380911 14Ga0078894_109310142 15Ga0073914_100656902 16Ga0070744_101033992 17Ga0070744_101284262 18Ga0070744_101588202 19Ga0070744_101650611 20Ga0075464_108768133 21Ga0102856_10681921 22Ga0114340_12722892 23Ga0114363_10550033 24Ga0114364_100257918 25Ga0114876_100065117 26Ga0114876_10167911 27Ga0114876_10637763 28Ga0114876_11413652 29Ga0114876_12590562 30Ga0102829_12292331 31Ga0102860_11763912 32Ga0114980_1000404215 33Ga0114980_100876913 34Ga0114978_103969542 35Ga0114975_100218354 36Ga0114974_1000011580 37Ga0114974_100475661 38Ga0114976_100353684 39Ga0114983_11349822 40Ga0114986_10482172 41Ga0133913_126669453 42Ga0133913_128774903 43Ga0151515_1017033 44Ga0136709_10029484 45Ga0136709_10411232 46Ga0153697_115324 47Ga0136712_10122193 48Ga0136712_10269543 49Ga0157139_10001382 50Ga0157139_10003702 51Ga0157497_100003935 52Ga0157497_10129322 53Ga0157210_100018531 54Ga0157208_100001297 55Ga0157543_10885654 56Ga0177922_100985004 57Ga0119960_10056893 58Ga0181363_10911112 59Ga0181350_10827622 60Ga0181365_10346843 61Ga0181365_10501961 62Ga0181352_10011234 63Ga0181344_10290785 64Ga0181344_10583471 65Ga0181344_12140512 66Ga0181346_10609272 67Ga0207193_10355484 68Ga0211736_107025143 69Ga0211726_102664381 70Ga0211735_113764872 71Ga0211731_111635122 72Ga0211731_114255182 73Ga0208601_10167643 74Ga0214162_10313192 75Ga0214163_10261294 76Ga0222713_104290022 77Ga0222712_1000144725 78Ga0222712_103306313 79Ga0222712_104287192 80Ga0244775_100890552 81Ga0244775_101010802 82Ga0244775_103067594 83Ga0244775_109013292 84Ga0208644_10517015 85Ga0208923_10852492 86Ga0208133_11140723 87Ga0209704_10297533 88Ga0209599_100489811 89Ga0209296_10008155 90Ga0209296_100443021 91Ga0209770_101675143 92Ga0209246_102575352 93Ga0209246_103312432 94Ga0209229_100039066 95Ga0209668_1001318414 96Ga0209668_111821351 97Ga0209298_102428312 98Ga0315291_107203862 99Ga0315293_102722503 100Ga0315899_109274281 101Ga0315909_100625151 102Ga0315909_102567283 103Ga0315285_106068113 104Ga0315904_1000243347 105Ga0315904_1001251628 106Ga0315294_105840653 107Ga0315905_100102724 108Ga0334979_0015747_273_446 109Ga0335031_0145455_1062_1235 110Ga0335058_0001884_12981_13154 111Ga0335049_0016024_1_174 112Ga0335039_0232960_370_546
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1FwDRAFT_102054033 2JGI24219J26650_10250732 3Ga0065166_100857784 4Ga0078894_100092855 5Ga0075464_108768133 6Ga0114363_10550033 7Ga0157208_100001297
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1FwDRAFT_102054033 2JGI24219J26650_10250732 3Ga0065166_100857784 4Ga0078894_100092855 5Ga0075464_108768133 6Ga0114363_10550033 7Ga0157208_100001297
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 87.72% β-sheet: 0.00% Coil/Unstructured: 12.28%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04860	Phage_portal	8.04
PF00210	Ferritin	5.36
PF08291	Peptidase_M15_3	3.57
PF08299	Bac_DnaA_C	3.57
PF14550	Peptidase_S78_2	1.79
PF08774	VRR_NUC	1.79
PF04883	HK97-gp10_like	0.89
PF01391	Collagen	0.89
PF03237	Terminase_6N	0.89
PF13385	Laminin_G_3	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	3.57

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.32 %
Unclassified	root	N/A	27.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	9.82 %
Unclassified	root	N/A	27.68 %
Viruses	superkingdom	All Organisms → Viruses	62.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.82 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	27.68 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.04 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	27.68 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	8.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	27.68 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8.04 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	27.68 %

Name	Rank	Taxonomy	Distribution
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	5.36 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	50.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	27.68 %

Name	Rank	Taxonomy	Distribution
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	5.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Unclassified	root	N/A	27.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	50.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000882\|FwDRAFT_10205403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1874	Open in IMG/M
3300002098\|JGI24219J26650_1025073	Not Available	767	Open in IMG/M
3300002161\|JGI24766J26685_10073795	Not Available	741	Open in IMG/M
3300003277\|JGI25908J49247_10000101	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22757	Open in IMG/M
3300003393\|JGI25909J50240_1067742	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	724	Open in IMG/M
3300004112\|Ga0065166_10085778	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1120	Open in IMG/M
3300004481\|Ga0069718_15366291	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	806	Open in IMG/M
3300004481\|Ga0069718_15444308	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	775	Open in IMG/M
3300005581\|Ga0049081_10167514	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	798	Open in IMG/M
3300005581\|Ga0049081_10274180	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.43%
Terrestrial	Environmental → Terrestrial	3.57%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.68%
Freshwater	Environmental → Aquatic → Freshwater	79.46%
Marine	Environmental → Aquatic → Marine	16.96%
Soil	Environmental → Terrestrial → Soil	0.89%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.79%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.57%
Lake	Environmental → Aquatic → Freshwater → Lake	33.93%
Lentic	Environmental → Aquatic → Freshwater → Lentic	25.89%
Lotic	Environmental → Aquatic → Freshwater → Lotic	7.14%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	9.82%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.68%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.46%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	29.46%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	21.43%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	9.82%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.89%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.68%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	8.04%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.57%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.57%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.25%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	6.25%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.36%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.36%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.57%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.68%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	16.07%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	10.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.46%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.79%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.89%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.89%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.79%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M

Showing 1 to 10 of 80 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FwDRAFT_102054033	3300000882	Freshwater And Marine	MSNHQQQIAEGITGTISSILLSVPAWLLDVEFALKMFCLVLSGIASIYTIIKMSRKK*
JGI24219J26650_10250732	3300002098	Lentic	MSNNQHQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIXKMRKXKR*
JGI24766J26685_100737952	3300002161	Freshwater And Sediment	MSSNQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIICLLLSAVASIFTIYKMNKKRR*
JGI25908J49247_1000010112	3300003277	Freshwater Lake	MSNNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLILSAAASIFTIYKMRKKR*
JGI25909J50240_10677422	3300003393	Freshwater Lake	MSNQQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR*
Ga0065166_100857784	3300004112	Freshwater Lake	GIYLHSYKRDMSNHQQQIAEGVTGTISSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMNKKRR*
Ga0069718_153662912	3300004481	Sediment	MSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIVCLILSGVASIFTIYKMNKRKR*
Ga0069718_154443082	3300004481	Sediment	MSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMSKKKR*
Ga0049081_101675142	3300005581	Freshwater Lentic	MSNNQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLILSAAASIFTIYKMRKKR*
Ga0049081_102741802	3300005581	Freshwater Lentic	MSNHQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLMLSAAASIFTIYKMRKKR*
Ga0049080_100368764	3300005582	Freshwater Lentic	MSNNQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLILSAAASIFTIY
Ga0078894_100092855	3300005662	Freshwater Lake	MSNHEQQIADGVIGTVSSIMLSIPAWLLDVEFALKIVCLILSGIASIITIAKMLKARK*
Ga0078894_100380911	3300005662	Freshwater Lake	MHSIKQKGIYLHSIKRDMSNHQQQIAEGVTGTISSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMNKKRR*
Ga0078894_109310142	3300005662	Freshwater Lake	MSSNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR*
Ga0073914_100656902	3300006040	Sand	MMSHQQQVAQGVTGTVSSILLSVPAWMVDVEFALKIFCLILSAAASIYTIYKMRKKR*
Ga0070744_101033992	3300006484	Estuarine	MMSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIFCLILSAAASIYTIYKMRKKR*
Ga0070744_101284262	3300006484	Estuarine	MMSHQQQVAQGVTGTVSSILLSVPAWMVDVEFALKIFCLMLSAAASIYTIYKMRKKR*
Ga0070744_101588202	3300006484	Estuarine	MSNHQQQIAEGVTGTISSILLSVPAWMLDIEFALKIICLILSGVASIITIYKMNKKRR*
Ga0070744_101650611	3300006484	Estuarine	LYTTKRVMSNNQHQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR*
Ga0075464_108768133	3300006805	Aqueous	GVTGTVSSILLSVPAWMLDVEFALKIVCLILSGIASIFTIYKMNKSKR*
Ga0102856_10681921	3300007636	Estuarine	MSNHQQQVAEGVTGTVSSILLSVPAWMLDVEFALKIFCLMLSAAASIYTIYKMRKKR*
Ga0114340_12722892	3300008107	Freshwater, Plankton	MSSNQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIICLLLSAAASIFTIYKMNKKRR*
Ga0114363_10550033	3300008266	Freshwater, Plankton	MSQQQRIAEGATGAISSILLNIPAWMLGVEFALKIFCLLLSAAASIFTIYKMYKKKR*
Ga0114364_100257918	3300008267	Freshwater, Plankton	MSNNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMRKKR*
Ga0114876_100065117	3300008448	Freshwater Lake	MSNHQQQVAEGVTGTISSILLSVPAWMLDVEFALKIICLLLSGVASIFTIYKMNKKRR*
Ga0114876_10167911	3300008448	Freshwater Lake	MSNHQQQITEGITGTISSILLSVPAWLLDVEFALKMFCLVLSGIASIYTIIKMSRKK*
Ga0114876_10637763	3300008448	Freshwater Lake	MSSNQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIICLILSGVASIFTIYKMNKKKR*
Ga0114876_11413652	3300008448	Freshwater Lake	MSNQQHQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMRKKR*
Ga0114876_12590562	3300008448	Freshwater Lake	MSNHQQQIAEGVTGTISSILLSIPAWLLDVEFALKMFCLVLSGIASIYTIIKMVKKK*
Ga0102829_12292331	3300009026	Estuarine	MMSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIFCLILSAAASIFTIYKMRKKR*
Ga0102860_11763912	3300009056	Estuarine	MMSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIFCLMLSAAASMYTIYKMRKKR*
Ga0114980_1000404215	3300009152	Freshwater Lake	MSNNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR*
Ga0114980_100876913	3300009152	Freshwater Lake	MSNSQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR*
Ga0114978_103969542	3300009159	Freshwater Lake	MSNSQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIFCLILSAVASIYTIYKMRKKR*
Ga0114975_100218354	3300009164	Freshwater Lake	MSNHQQQIAEGVTGTISSILLSVPAWLLDVEFALKMFCLVLSGIASIYTIIKMAKKK*
Ga0114974_1000011580	3300009183	Freshwater Lake	MSNHQQQITEGITGTISSILLSVPAWLLDVEFALKMFCLFLSGIASIYTIIKMAKKK*
Ga0114974_100475661	3300009183	Freshwater Lake	TTKRVMSNSQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIFCLMLSAVASIYTIYKMRKKR*
Ga0114976_100353684	3300009184	Freshwater Lake	MSNHQQQIAEGVTGTISSILLSIPAWLLDVEFALKMFCLVLSGIASIYTIIKMAKKK*
Ga0114983_11349822	3300009194	Deep Subsurface	MSNHQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLLLSAVASVFTIYKMSKKKR*
Ga0114986_10482172	3300010374	Deep Subsurface	MSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASVFTIYKMSKKKR*
Ga0133913_126669453	3300010885	Freshwater Lake	MSNHQQQIAEGVTGTISSILLSVPAWLLDVEFALKMFCLVLSGIASIY
Ga0133913_128774903	3300010885	Freshwater Lake	SQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIFCLMLSAVASIYTIYKMRKKR*
Ga0151515_1017033	3300011114	Freshwater	MSNHQQQVAEGVTGTVSSILLSVPAWMLDVEFALKIVCLILSGIASIFTIYKMNKRKR*
Ga0136709_10029484	3300011184	Freshwater	MSSNQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMNKKRK*
Ga0136709_10411232	3300011184	Freshwater	MSNHQQQVAEGVTGAVSSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMRKKR*
Ga0153697_115324	3300011334	Freshwater	MSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIVCLILSGIASIFTIYKMNKRKK*
Ga0136712_10122193	3300012266	Freshwater	MSNHQQQIAEGVTGTISSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMNKKRR*
Ga0136712_10269543	3300012266	Freshwater	MSNHQQQVAEGVTGAVSSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMNKKRK*
Ga0157139_10001382	3300012345	Freshwater	MSNNQQQIAEGVTGTISSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMRKKK*
Ga0157139_10003702	3300012345	Freshwater	MSNHQQQIAEGVTGTISSILLSIPAWLLNVEFALKMFCLILSGIASIYTIIKMAKKK*
Ga0157497_100003935	3300012664	Freshwater	MSTNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMSKKKR*
Ga0157497_10129322	3300012664	Freshwater	MSNHQQQVAEGVTGTISSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMNKKRR*
Ga0157210_100018531	3300012665	Freshwater	MSNNQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMRKKK*
Ga0157208_100001297	3300012667	Freshwater	MSSKQEIAEGVTGTISSILLSVPAWMVDVEFALKIICLILSGVASVITIYKMNKKRR*
Ga0157543_10885654	3300012687	Freshwater	MSNHQQQVAEGVTGAVSSILLSVPAWMVDVEFALKIFCLILSAAASIFTIYKMRKKR*
Ga0177922_100985004	3300013372	Freshwater	TKRIMMSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIFCLILSAAASIYTIYKMRKKR*
Ga0119960_10056893	3300014811	Aquatic	MSNHQQQVAEGVTGAVTSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR*
Ga0181363_10911112	3300017707	Freshwater Lake	MHSIKQKGIYLHSIKRDMSNHQQQIAEGVTGTISSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMNKKRR
Ga0181350_10827622	3300017716	Freshwater Lake	MSNNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLMLSAVASIYTIYKMRKKR
Ga0181365_10346843	3300017736	Freshwater Lake	MMSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIFCLMLSAVASIYTIYKMRKKR
Ga0181365_10501961	3300017736	Freshwater Lake	MSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIFCLILSAAASIYTIYKMRKKR
Ga0181352_10011234	3300017747	Freshwater Lake	MSNHQQQIAEGVTGTISSILLAVPAWLLDVEFALKMFCLFLSGIASIYTIIKMAKKK
Ga0181344_10290785	3300017754	Freshwater Lake	MSNHQQQVAEGITGTVSSILLSIPAWMLDVEFALKIFCLLLSAAASIFTIYKMRKSKR
Ga0181344_10583471	3300017754	Freshwater Lake	MSSKQEIAEGVTGTISSILLSVPAWMVDVEFALKIICLILSGIASVI
Ga0181344_12140512	3300017754	Freshwater Lake	MSNNQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYK
Ga0181346_10609272	3300017780	Freshwater Lake	MSNHQQQIAEGVTGTISSILLSVPAWLLNVEFALKMFCLFLSGVASIYTIIKMAKKK
Ga0207193_10355484	3300020048	Freshwater Lake Sediment	MSNHQQQIAEGVTGTISSILLSVPAWLLDVEFALKMFCLVLSGIASIYTIIKMAKKK
Ga0211736_107025143	3300020151	Freshwater	MSNHQQQVAEGITGTVSSILLSIPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKSKR
Ga0211726_102664381	3300020161	Freshwater	MSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR
Ga0211735_113764872	3300020162	Freshwater	MSNHQQQVAEGITGTVSSILLSIPAWMLDVEFALKIFCLILSAAASIFTIYKMRKSKR
Ga0211731_111635122	3300020205	Freshwater	MSNHQQQVAEGITGTVSSILLSIPAWMLDVEFALKIFCLILSGAASIYTIYKMRKKR
Ga0211731_114255182	3300020205	Freshwater	MSNNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR
Ga0208601_10167643	3300020532	Freshwater	MSNHQQQIAEGVTGTISSILLSVPAWLLDVEFALKMFCLFLSGIASIYTIIKMAKKK
Ga0214162_10313192	3300021108	Freshwater	MSNHQQQVAEGVTGAVSSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMRKKR
Ga0214163_10261294	3300021141	Freshwater	MSNHQQQIAEGVTGTISSILLSIPAWLLDVEFALKMFCLVLSGIASIYTIIKMSKKK
Ga0222713_104290022	3300021962	Estuarine Water	MSNQQHQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMRKKR
Ga0222712_1000144725	3300021963	Estuarine Water	MSSKEQQIAEGVTGTVSSILLSVPAWMLDIEFALKIICLLLSAAASIFTIYKMNKKRR
Ga0222712_103306313	3300021963	Estuarine Water	MMSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIVCLMLSAAASIYTIYKMRKKR
Ga0222712_104287192	3300021963	Estuarine Water	MSNHQQQVAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKSKR
Ga0244775_100890552	3300024346	Estuarine	MMSHQQQVAQGVTGTVSSILLSVPAWMVDVEFALKIFCLMLSAAASIYTIYKMRKKR
Ga0244775_101010802	3300024346	Estuarine	MSSNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIYTIYKMRKKR
Ga0244775_103067594	3300024346	Estuarine	MSNNQHQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR
Ga0244775_109013292	3300024346	Estuarine	MMSHQQQVAQGVTGTVSSILLSVPAWMLDVEFALKIFCLILSAAASIYTIYKMRKKR
Ga0208644_10517015	3300025889	Aqueous	MSNHQQQIAEGVTGTISSILLSIPAWLLDVEFALKMFCLVLSGIASIYTIIKMAKKK
Ga0208923_10852492	3300027320	Estuarine	MMSHQQQVAQGVTGTVSSILLSVPAWMVDVEFALKIFCLILSAAASIYTIYKMRKKR
Ga0208133_11140723	3300027631	Estuarine	TERVMSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMRKK
Ga0209704_10297533	3300027693	Freshwater Sediment	MSNHQQQIAEGVTGTISSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMNK
Ga0209599_100489811	3300027710	Deep Subsurface	MSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASVFTIY
Ga0209296_10008155	3300027759	Freshwater Lake	MSNHQQQITEGITGTISSILLSVPAWLLDVEFALKMFCLFLSGIASIYTIIKMAKKK
Ga0209296_100443021	3300027759	Freshwater Lake	MSNSQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIFCLMLSAVASIYTIYKMRKKR
Ga0209770_101675143	3300027769	Freshwater Lake	MSSNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR
Ga0209246_102575352	3300027785	Freshwater Lake	MSNNQHQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLILSAAASIFTIYKMRKKR
Ga0209246_103312432	3300027785	Freshwater Lake	MSNQQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTIYKMRKKR
Ga0209229_100039066	3300027805	Freshwater And Sediment	MSNHQQQIAEGVTGTISSILLSVPAWLLDVEFALKMFCLFLSGLASIYTIIKMAKKK
Ga0209668_1001318414	3300027899	Freshwater Lake Sediment	MSNHQQQVAEGVTGAVSSILLSVPAWMVDVEFALKIFCLLLSAVASIFTIYKMRKKR
Ga0209668_111821351	3300027899	Freshwater Lake Sediment	MSNHQQQIAEGVTGTISSILLSIPAWLLDVEFALKMFCLILSGIASIYTIIKMAKKK
Ga0209298_102428312	3300027973	Freshwater Lake	MSNNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIFTI
Ga0315291_107203862	3300031707	Sediment	MSNHQQQVAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAVASIYTIYKMRKKR
Ga0315293_102722503	3300031746	Sediment	MSNNQQQIAEGVTGTVSSILLSVPAWMVDVEFALKIFCLLLSAVASIFTIYKMRKKR
Ga0315899_109274281	3300031784	Freshwater	MSNNQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAAASIFTI
Ga0315909_100625151	3300031857	Freshwater	MSQQQRIAEGATGAISSILLNIPAWMLGVEFALKIFCLLLSAAASIFTIY
Ga0315909_102567283	3300031857	Freshwater	MSSNQQQIAEGVTGTVSSILLSVPAWMLDIEFALKIICLLLSAAASIFTIYKMNKKRR
Ga0315285_106068113	3300031885	Sediment	AQGVTGTVSSILLSVPAWMLDVEFALKIFCLMLSAAASIYTIYKMRKKR
Ga0315904_1000243347	3300031951	Freshwater	MSNHQQQVAEGVTGTISSILLSVPAWMLDVEFALKIICLLLSGVASIFTIYKMNKKRR
Ga0315904_1001251628	3300031951	Freshwater	MEMSNHQQQIAEGVTGTVSSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMSKKKR
Ga0315294_105840653	3300031952	Sediment	MSNHQQQVAEGVTGAVSSILLSVPAWMVDVEFALKIFCLILSAAASIFTIYKMRKKR
Ga0315905_100102724	3300032092	Freshwater	MSNHEQQVADGMLGTISSIMLSVPAWLLDVEFALKIFCLILSGIASVFTIARMLKPKK
Ga0334979_0015747_273_446	3300033996	Freshwater	MSNHQQQVAEGVTGAVSSILLSVPAWMVDVEFALKIFCLMLSAAASIFTIYKMRKKR
Ga0335031_0145455_1062_1235	3300034104	Freshwater	MSNHQHQIAEGVAGTISSILLAVPAWLLDVEFALKMFCLILSGIASIYTIIKMAKKK
Ga0335058_0001884_12981_13154	3300034121	Freshwater	MSNHQQQVAEGVTGAVTSILLSVPAWMVDVEFALKIFCLLLSAAASIFTIYKMRKKR
Ga0335049_0016024_1_174	3300034272	Freshwater	SNHQQQIAEGVTGTISSILLSVPAWMLDVEFALKIFCLLLSAAASIFTIYKMNKKRR
Ga0335039_0232960_370_546	3300034355	Freshwater	MSNHEQQVADGVVGTISSIMLSVPAWLLDVEFALKITCLLLSGVASIVTIYKMLRHRK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084221

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences