Metagenome / Metatranscriptome Family F084211

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084211
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	50 residues
Representative Sequence	MKVGDLVEHNGHLALVICVESYETLIKWLDDGTVEDADNYTIGLEVISESR
Number of Associated Samples	80
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	19.64 %
% of genes from short scaffolds (< 2000 bps)	79.46 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.607 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.750 % of family members)
Environment Ontology (ENVO)	Unclassified (85.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.06% β-sheet: 30.38% Coil/Unstructured: 64.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.6.2: Kid/PemK	d1m1fa_	1m1f	0.69467
b.34.19.1: Mib/herc2 domain	d3dkma1	3dkm	0.6871
b.34.9.4: CPH domain	d2jnga1	2jng	0.68656
b.34.13.0: automated matches	d3m9qa_	3m9q	0.68154
d.3.1.21: YiiX-like	d2if6a1	2if6	0.67824

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01541	GIY-YIG	1.79
PF07728	AAA_5	1.79
PF09967	DUF2201	0.89
PF04308	RNaseH_like	0.89
PF00118	Cpn60_TCP1	0.89
PF13291	ACT_4	0.89
PF01327	Pep_deformylase	0.89
PF10431	ClpB_D2-small	0.89
PF03851	UvdE	0.89
PF13203	DUF2201_N	0.89
PF09834	DUF2061	0.89
PF12544	LAM_C	0.89
PF14378	PAP2_3	0.89
PF03061	4HBT	0.89
PF00462	Glutaredoxin	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
All Organisms	root	All Organisms	38.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
cellular organisms	root	All Organisms → cellular organisms	24.11 %
Viruses	superkingdom	All Organisms → Viruses	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	8.93 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.93 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	8.04 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	1.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	8.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.14 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	1.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	8.04 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	3.57 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.89 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.89 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	8.04 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	3.57 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.79 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.89 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.89 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.89 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	8.04 %
Alteromonas/Salinimonas group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group	3.57 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.79 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.89 %
unclassified Methylococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae	0.89 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.89 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	8.04 %
Alteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas	3.57 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.79 %
Methylococcaceae bacterium TMED69	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	0.89 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.89 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.89 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.50 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	8.04 %
Alteromonas australica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas australica	3.57 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1.79 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.89 %
Methylococcaceae bacterium TMED69	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	0.89 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.89 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001740\|JGI24656J20076_1008477	All Organisms → Viruses → Predicted Viral	1416	Open in IMG/M
3300001740\|JGI24656J20076_1020814	Not Available	756	Open in IMG/M
3300002488\|JGI25128J35275_1037911	Not Available	1090	Open in IMG/M
3300006027\|Ga0075462_10055549	All Organisms → Viruses → Predicted Viral	1255	Open in IMG/M
3300006565\|Ga0100228_1486711	Not Available	983	Open in IMG/M
3300006736\|Ga0098033_1160412	Not Available	628	Open in IMG/M
3300006736\|Ga0098033_1204375	Not Available	547	Open in IMG/M
3300006738\|Ga0098035_1011871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	3545	Open in IMG/M
3300006738\|Ga0098035_1050349	Not Available	1524	Open in IMG/M
3300006738\|Ga0098035_1090853	All Organisms → Viruses → Predicted Viral	1071	Open in IMG/M
3300006738\|Ga0098035_1220649	Not Available	629	Open in IMG/M
3300006750\|Ga0098058_1182523	Not Available	549	Open in IMG/M
3300006751\|Ga0098040_1061961	Not Available	1151	Open in IMG/M
3300006753\|Ga0098039_1214003	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	651	Open in IMG/M
3300006754\|Ga0098044_1182860	Not Available	830	Open in IMG/M
3300006789\|Ga0098054_1010840	Not Available	3758	Open in IMG/M
3300006789\|Ga0098054_1359515	Not Available	515	Open in IMG/M
3300006790\|Ga0098074_1088974	Not Available	825	Open in IMG/M
3300006919\|Ga0070746_10215327	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300006923\|Ga0098053_1000587	Not Available	11976	Open in IMG/M
3300006923\|Ga0098053_1084201	Not Available	644	Open in IMG/M
3300006923\|Ga0098053_1087414	Not Available	631	Open in IMG/M
3300006927\|Ga0098034_1187967	Not Available	578	Open in IMG/M
3300006929\|Ga0098036_1112856	Not Available	834	Open in IMG/M
3300007113\|Ga0101666_1113271	Not Available	501	Open in IMG/M
3300008050\|Ga0098052_1004346	Not Available	8194	Open in IMG/M
3300008050\|Ga0098052_1098662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas australica	1192	Open in IMG/M
3300008097\|Ga0111541_10560336	Not Available	506	Open in IMG/M
3300008624\|Ga0115652_1033240	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1929	Open in IMG/M
3300009353\|Ga0103847_1004660	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300009370\|Ga0118716_1002994	Not Available	21724	Open in IMG/M
3300009593\|Ga0115011_10452456	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300009705\|Ga0115000_10614086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas australica	676	Open in IMG/M
3300010150\|Ga0098056_1178014	Not Available	714	Open in IMG/M
3300010153\|Ga0098059_1050140	Not Available	1679	Open in IMG/M
3300010155\|Ga0098047_10120736	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1019	Open in IMG/M
3300011258\|Ga0151677_1195316	Not Available	834	Open in IMG/M
3300012919\|Ga0160422_10000443	Not Available	24870	Open in IMG/M
3300012928\|Ga0163110_11422281	Not Available	561	Open in IMG/M
3300012952\|Ga0163180_10471563	Not Available	932	Open in IMG/M
3300017718\|Ga0181375_1019042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas australica	1180	Open in IMG/M
3300017731\|Ga0181416_1093689	Not Available	715	Open in IMG/M
3300017750\|Ga0181405_1047579	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300017764\|Ga0181385_1020927	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2093	Open in IMG/M
3300017775\|Ga0181432_1079390	Not Available	957	Open in IMG/M
3300017775\|Ga0181432_1080400	Not Available	951	Open in IMG/M
3300017951\|Ga0181577_10365023	Not Available	925	Open in IMG/M
3300017956\|Ga0181580_10852262	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300018039\|Ga0181579_10358244	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300018421\|Ga0181592_10930033	Not Available	564	Open in IMG/M
3300020165\|Ga0206125_10017431	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4485	Open in IMG/M
3300020255\|Ga0211586_1032549	Not Available	916	Open in IMG/M
3300020255\|Ga0211586_1056442	Not Available	636	Open in IMG/M
3300020280\|Ga0211591_1105683	Not Available	586	Open in IMG/M
3300020380\|Ga0211498_10252657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium TMED69	666	Open in IMG/M
3300020393\|Ga0211618_10186949	Not Available	712	Open in IMG/M
3300020393\|Ga0211618_10247338	Not Available	602	Open in IMG/M
3300020394\|Ga0211497_10131244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	991	Open in IMG/M
3300020394\|Ga0211497_10320154	Not Available	576	Open in IMG/M
3300020395\|Ga0211705_10305742	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	589	Open in IMG/M
3300020397\|Ga0211583_10018375	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3018	Open in IMG/M
3300020403\|Ga0211532_10109862	Not Available	1170	Open in IMG/M
3300020403\|Ga0211532_10149763	Not Available	958	Open in IMG/M
3300020410\|Ga0211699_10138308	Not Available	915	Open in IMG/M
3300020411\|Ga0211587_10012693	All Organisms → Viruses → Predicted Viral	4440	Open in IMG/M
3300020411\|Ga0211587_10035249	All Organisms → Viruses → Predicted Viral	2361	Open in IMG/M
3300020411\|Ga0211587_10039935	All Organisms → Viruses → Predicted Viral	2192	Open in IMG/M
3300020411\|Ga0211587_10284720	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	680	Open in IMG/M
3300020411\|Ga0211587_10448122	Not Available	519	Open in IMG/M
3300020411\|Ga0211587_10465871	Not Available	507	Open in IMG/M
3300020414\|Ga0211523_10376869	Not Available	576	Open in IMG/M
3300020417\|Ga0211528_10186719	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300020424\|Ga0211620_10462177	Not Available	535	Open in IMG/M
3300020430\|Ga0211622_10022789	Not Available	3002	Open in IMG/M
3300020437\|Ga0211539_10252190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	728	Open in IMG/M
3300020460\|Ga0211486_10293387	Not Available	701	Open in IMG/M
3300020465\|Ga0211640_10166011	Not Available	1253	Open in IMG/M
3300020470\|Ga0211543_10455652	Not Available	611	Open in IMG/M
3300020471\|Ga0211614_10544816	Not Available	514	Open in IMG/M
3300020472\|Ga0211579_10197216	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300020473\|Ga0211625_10054909	Not Available	2429	Open in IMG/M
3300020477\|Ga0211585_10333803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	898	Open in IMG/M
3300020478\|Ga0211503_10094637	Not Available	1773	Open in IMG/M
3300025066\|Ga0208012_1006647	All Organisms → cellular organisms → Bacteria → Proteobacteria	2226	Open in IMG/M
3300025093\|Ga0208794_1002830	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6266	Open in IMG/M
3300025112\|Ga0209349_1030324	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1813	Open in IMG/M
3300025112\|Ga0209349_1117645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → Alteromonas australica	742	Open in IMG/M
3300025112\|Ga0209349_1178508	Not Available	554	Open in IMG/M
3300025114\|Ga0208433_1101801	Not Available	711	Open in IMG/M
3300025114\|Ga0208433_1128475	Not Available	611	Open in IMG/M
3300025118\|Ga0208790_1177761	Not Available	573	Open in IMG/M
3300025122\|Ga0209434_1057768	Not Available	1181	Open in IMG/M
3300025131\|Ga0209128_1014217	All Organisms → cellular organisms → Bacteria → Proteobacteria	3742	Open in IMG/M
3300025132\|Ga0209232_1149072	Not Available	748	Open in IMG/M
3300025133\|Ga0208299_1000373	Not Available	42019	Open in IMG/M
3300025133\|Ga0208299_1005078	Not Available	7595	Open in IMG/M
3300025133\|Ga0208299_1036108	All Organisms → Viruses → Predicted Viral	2003	Open in IMG/M
3300025133\|Ga0208299_1092805	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300025141\|Ga0209756_1004122	Not Available	11427	Open in IMG/M
3300025141\|Ga0209756_1059487	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1816	Open in IMG/M
3300025141\|Ga0209756_1095155	Not Available	1298	Open in IMG/M
3300025151\|Ga0209645_1012869	Not Available	3322	Open in IMG/M
3300025151\|Ga0209645_1097688	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	956	Open in IMG/M
3300025268\|Ga0207894_1015018	Not Available	1437	Open in IMG/M
3300026269\|Ga0208766_1178429	Not Available	527	Open in IMG/M
3300029319\|Ga0183748_1006547	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	5334	Open in IMG/M
3300029319\|Ga0183748_1050953	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300029319\|Ga0183748_1081123	Not Available	799	Open in IMG/M
3300029319\|Ga0183748_1121087	Not Available	566	Open in IMG/M
3300031774\|Ga0315331_10218700	All Organisms → Viruses → Predicted Viral	1413	Open in IMG/M
3300032138\|Ga0315338_1051001	All Organisms → Viruses → Predicted Viral	1601	Open in IMG/M
3300032138\|Ga0315338_1117119	Not Available	873	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.11%
Freshwater	Environmental → Aquatic → Freshwater	0.89%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	50.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	32.14%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.25%
Coastal	Environmental → Aquatic → Marine → Coastal	4.46%
Strait	Environmental → Aquatic → Marine → Strait	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.89%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.89%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	47.32%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	32.14%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	4.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.57%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.68%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.75%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	32.14%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	4.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.57%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.68%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.68%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.68%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.79%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.89%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.89%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.89%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.89%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.89%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001740	Marine viral communities from the Deep Pacific Ocean - MSP-114	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007113	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, Water-is	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300008624	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 250-2.7um	Environmental	Open in IMG/M
3300009353	Microbial communities of water from the North Atlantic ocean - ACM49	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020255	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556136-ERR599013)	Environmental	Open in IMG/M
3300020280	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX556044-ERR599114)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020395	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020473	Marine microbial communities from Tara Oceans - TARA_B100000700 (ERX555932-ERR598948)	Environmental	Open in IMG/M
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025093	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032138	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24656J20076_10084776	3300001740	Deep Ocean	MKVGDLVMCNEYLAIVIVSDAYETLIRWLDDGVVEDADNYTLGLELISASR*
JGI24656J20076_10208145	3300001740	Deep Ocean	ERKKMKVGDLVICNEHLAIVIVSDACETLIRWLDDGVVEDADNYTLGLEVISESR*
JGI25128J35275_10379114	3300002488	Marine	MKVGDLVEHNGYLALVVCANAFETLIKWLDDGIVEDADNYTIGLEVISESR*
Ga0075462_100555491	3300006027	Aqueous	MQVGDLVSSNGHLAIVICVNAYETLIKWLDDGIVEDADNYGTSLEVVSASR*
Ga0100228_14867111	3300006565	Marine	VKVGDLVRCRNHFAIVICVNAHETLIKWLDDGIVEDADNYTIGLEVVSESG*
Ga0098033_11604123	3300006736	Marine	VKVGDLVMSNGHIALVICVNVYETLIKWLDDGIVEDADNYRLGLEVVSESR*
Ga0098033_12043753	3300006736	Marine	VQVGDLVEHNGYLGLIVCANDFETLIRWLDDGEVEDADNYTIGLEVVSESR*
Ga0098035_101187110	3300006738	Marine	VKVGDLVMSNGHIALVICVNVYETLIKWVDDGIVEDADNYRLGLEVVSESR*
Ga0098035_10503499	3300006738	Marine	NGYLALVICVESYETLIRWLDDGTVEDADNYTIGLETVSESR*
Ga0098035_10908536	3300006738	Marine	LVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEVVSESR*
Ga0098035_12206493	3300006738	Marine	VEVGDLVKHNGYLAIVIVSNAYETLIKWLDDGEIEDADNYTIGLEVISESG*
Ga0098058_11825231	3300006750	Marine	MQVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLETVSESR*
Ga0098040_10619614	3300006751	Marine	MKVGDLVMCNEHLAIVIVNDAYETLIRWLDDGVVEDADNYTLSLEVVSESR*
Ga0098039_12140033	3300006753	Marine	MQVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEVVSESR*
Ga0098044_11828605	3300006754	Marine	MKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLETV
Ga0098054_10108401	3300006789	Marine	MKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLE
Ga0098054_13595153	3300006789	Marine	VQVGDLVEHSGYLGLIICANDFETLVRWLDDGTVEDADNYTIGLEVVSESR*
Ga0098074_10889743	3300006790	Marine	VKVGDLVETDLGYLGIVICANAFETLIRWLDDGTVEDAGNYTSGLEVISESR*
Ga0070746_102153272	3300006919	Aqueous	MRVGDLVRCNGHLAIVICVNAYETLIKWLDDGIVEDADNYTMGLEVISASR*
Ga0098053_10005872	3300006923	Marine	MKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEIVSESR*
Ga0098053_10842014	3300006923	Marine	TTWRSSVKVGDLVEHSGYLGLIICANDFETLVRWLDDGTVEDADNYTIGLEVVSESR*
Ga0098053_10874141	3300006923	Marine	VKVGDLVMSNGHVALVIFVDSSETLIKWLCDDIVEDADNYRVGLEVVSESR*
Ga0098034_11879671	3300006927	Marine	MKVGDLVMSNGHIALVICVNVYETLIKWLDDGIVEDADNYRLG
Ga0098036_11128561	3300006929	Marine	VGDLVEHNGYLALVICVESYETLIKWLDDGTVEDADNYTIGLEVISESR*
Ga0101666_11132711	3300007113	Volcanic Co2 Seep Seawater	MQVGDLVSSNGHLAIVICVNAYETLIKWLDDGIVEDADNY
Ga0098052_10043469	3300008050	Marine	VKVGDLVTSNGHLALVVVSNAYETLVEWLDDGIVEDADNYSLSLEVVSESR*
Ga0098052_10986625	3300008050	Marine	VQVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEVVSESR*
Ga0111541_105603362	3300008097	Marine	MKVGDLVRSNGHLAIVICVNAYETLIKWLDDGIVEDADNYGTSLEVISESR*
Ga0115652_10332402	3300008624	Marine	MKAGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEVVSESR*
Ga0103847_10046601	3300009353	River Water	MRVGDLVSSNGHLAIVICVNAHETLIKWVSDGIVEDADNYTIGLE
Ga0118716_100299422	3300009370	Marine	MMQHNASNAYYALVVVSNAHETLIKWLDDGVVEDADNYSLGLKVISENR*
Ga0115011_104524562	3300009593	Marine	MKVGDLVKNGNHVALVIVVNAHETLIKWVDDGIVADAANYTLGLEVM*
Ga0115000_106140862	3300009705	Marine	VKPGDLVKHGNHVALVVVANAYETLIKWVDDGIVEDVDNYTLGLEVISESR*
Ga0098056_11780142	3300010150	Marine	VQVGDLVEHSGYLGLIICANDFETLIRWLDDGTVEDADNYTIGLEVVSASR*
Ga0098059_10501401	3300010153	Marine	MKVGDLVEHNGHLALVICVESYETLIKWLDDGTVEDADNYTIGLEVISESR*
Ga0098047_101207364	3300010155	Marine	VKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLETVSESR*
Ga0151677_11953162	3300011258	Marine	MKVGDLVSSNGYLAIVICVNAHETLIKWLDDGIVEDANNYTTGLEVISESR*
Ga0160422_1000044310	3300012919	Seawater	VKVGDLVEHSGYLGLIICANDFETLVRWLDDGTVEDADNYTIGLEVVSESR*
Ga0163110_114222812	3300012928	Surface Seawater	MQVGDLVSCNGHLAIVICVNAHETLIKWLDDGIVEDADNYTTSLEVISASR*
Ga0163180_104715631	3300012952	Seawater	MKVGDLVEHNGYLALVICVESYETLIKWLDDGTVEDADNYTIGLELVSESR*
Ga0181375_10190427	3300017718	Marine	VKVGDLVMSNGHIALVICVNVYETLIKWLDDGIVEDADNYRLGLEVVSESR
Ga0181416_10936893	3300017731	Seawater	MKIGDLVEHNGYLALVICVESYETLIKWLDDGTVEDADNYTIGLEVVSESR
Ga0181405_10475792	3300017750	Seawater	MKVGDLVMCNGHVALVIVANAHETLIKWAEDGIVEDADNYTIGLEVVSESR
Ga0181385_10209279	3300017764	Seawater	DYLAIVIVSNACETLIKWLDCGVVEDADMYTTSLEIVSETR
Ga0181432_10793901	3300017775	Seawater	MKVGDLVRCNEYLAIVIVSDAYETLIKWFDDGVVEDADNYTLRLEVISESR
Ga0181432_10804003	3300017775	Seawater	VKVGDLVMSNGHIALVICANVYETLIKWLDDGIVEDADNYTLGLEVVSESR
Ga0181577_103650233	3300017951	Salt Marsh	MQVGDLVSSNGHLAIVICVNAYETLIKWLDDGIVEDADNYGTSLEVVSASR
Ga0181580_108522623	3300017956	Salt Marsh	MQVGDLVRHNGYLAIVICVNAHETLIKWLDDGIVEDADNYTTSLEVISASR
Ga0181579_103582442	3300018039	Salt Marsh	MRVGDLVRCNGHLAIVICVNAYETLIKWLDDGIVEDADNYTMGLEVISASR
Ga0181592_109300332	3300018421	Salt Marsh	MQVGDLVRSNRHLAIVICVNAHETLIKWLDDGIVEDADNYWPPLEVISASR
Ga0206125_100174311	3300020165	Seawater	VKVGDLVETDLGYLGIVICANALETLIRWLDDGTVEDAGNYTCGLEVISESR
Ga0211586_10325492	3300020255	Marine	MNVGDLVRCRNHLAIVICVNAHETLIKWLDDGIVEDADNYTIGLEVVSESR
Ga0211586_10564422	3300020255	Marine	MKVGDLVSSNGYLAIVICVNAHETLIKWLDDGIVEDADNYGTSLEVISESR
Ga0211591_11056832	3300020280	Marine	MQVGDLVSSNGHLAIVICVNAYETLIKWFDDGIVEDADNYGTSLEVISASG
Ga0211498_102526571	3300020380	Marine	MQVGDLVSSNGHLAIVICVNAHETLIKWFSDGIVEDADNYTTSLEVISASR
Ga0211618_101869492	3300020393	Marine	VKVGDLVRCRNHLAIVICVNAHETLIKWLDDGVVEDADNYTIGLEVISESR
Ga0211618_102473382	3300020393	Marine	VRVGDLVRSNGHLAIVICVNAHETLIRWLDDGIVADAANYTTSLEVISESR
Ga0211497_101312441	3300020394	Marine	MQVGDLVRCNGHLAIVICVNAHETLIKWLDDGIVEDADNY
Ga0211497_103201543	3300020394	Marine	MKVGDLVRCRNHLAIVICVNAHETLIKWLDDGIVEDADNYTIGLEVVSESR
Ga0211705_103057423	3300020395	Marine	MKVGDLVKSGNHVALVIVVNAYETLIKWVDDGIVEDADNYALSLEIVSESR
Ga0211583_100183757	3300020397	Marine	VKVGDLVRSNGHLAIVICVNVHETLIRWLDDGIVEDADNYRLSLEVVSESR
Ga0211532_101098622	3300020403	Marine	MKVGDLVRSNGHLAIVICVNAHETLIKWVSDGIVADANNYTTSLEVVSESR
Ga0211532_101497633	3300020403	Marine	MKVGDLVRCNGHLAIVIVADAYETLIKWLDDGIVEDADNYSTGLEVISENR
Ga0211699_101383081	3300020410	Marine	VQVGDLVRSNGHLAIVICVNTHETLIKWLDDGIVEDADNYTTSLEVISASR
Ga0211587_100126939	3300020411	Marine	MKVGDLVSSNGYLAIVICVNAHETLIKWLDDGIVEDADNYGTSLEVISASR
Ga0211587_100352493	3300020411	Marine	MKVGDLVACNGHYAIVIVANACETLIKWLDDGVVEDADNYTIGLEIINASR
Ga0211587_100399352	3300020411	Marine	MQVGDLVSSNGHLAIVICVNAHETLIKWFDDGIVSDANNYRTSLEVISASR
Ga0211587_102847204	3300020411	Marine	TQRWRVMKVGDLVEHNGYLGLIICANDFETLVRWFDDGTVEDADNYSPLPIGLEVVSESR
Ga0211587_104481222	3300020411	Marine	MKVGDLVSSNGHLAIVICVNAHETLIKWVSDGIVADANNYTTSLEVISASR
Ga0211587_104658712	3300020411	Marine	MKVGDLVMCNGHVALVIVANAHETLIKWADDGIVEDADNYTIGLEVVSGA
Ga0211523_103768693	3300020414	Marine	MQVGDLVRHNGYLAIVICANAYETLIKWLDDGIVEDADNYTTSLEVISASR
Ga0211528_101867192	3300020417	Marine	MQVGDLVSSNGHLAIVICVNAHETLIKWVSDGIVADANNYTTSLEVISARR
Ga0211620_104621773	3300020424	Marine	MKVGDLVRCRNHLAIVICVNAHETLIKWLDDGVVEDADNYTIGLEVISESR
Ga0211622_100227894	3300020430	Marine	MKVGDLVSSNGYLAIVICVNAYETLIKWLDDGIVEDADNYGTSLEVISASR
Ga0211539_102521901	3300020437	Marine	MQVGDLVRCRNHLAIVICVNAHETLIKWLDDGVVEDAD
Ga0211486_102933871	3300020460	Marine	LVRCRNHLAIVICVNAHETLIKWLDDGIVEDADNYTTSLEVISESR
Ga0211640_101660111	3300020465	Marine	RRWRSSVKVGDLVEHNGYLGLIICANDFETLVRWLDDGTVEDADNYTIGLKVISESR
Ga0211543_104556521	3300020470	Marine	VKVGDLVMCNGHVALVIVANAHETLIKWADDGIVEDADNYTIGLEVVSGA
Ga0211614_105448162	3300020471	Marine	MKVGDLVCCRNHLAIVICVNAHETLIKWLDDGVVEDADNYTIGLEVISESR
Ga0211579_101972162	3300020472	Marine	VQVGDLVMSNGHLAIVICVNAHETLIKWLDDGIVEDADNYTIGLELVSASR
Ga0211625_100549096	3300020473	Marine	MRVGDLVSSNGYLAIVICVNAYETLIKWLDDGIVEDADNYGTSLEVISASR
Ga0211585_103338031	3300020477	Marine	MKVGDLVRCKNHLAIVICVNAHETLIKWLDDGIVEDADNYTIGLEVISESR
Ga0211503_100946373	3300020478	Marine	MKVGDLVRCNEHLAIVIVSDAYETLIRWLDDGVVEDADNYTLSLEVISETR
Ga0208012_10066474	3300025066	Marine	MSKKPARLLMKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEIVSESR
Ga0208794_100283017	3300025093	Marine	VKVGDLVETDLGYLGIVICANAFETLIRWLDDGTVEDAGNYTSGLEVISESR
Ga0209349_10303247	3300025112	Marine	VKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEIVSESR
Ga0209349_11176453	3300025112	Marine	VQVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLETV
Ga0209349_11785081	3300025112	Marine	MKVGDLVMSNGHIALVICVNVYETLIKWLDDGIVEDADNYRLGLEVVSESR
Ga0208433_11018013	3300025114	Marine	VKVGDLVMSNGHIALVICVNVYETLIKWVDDGIVEDADNYRLGLEVVSESR
Ga0208433_11284752	3300025114	Marine	VKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLETVSESR
Ga0208790_11777613	3300025118	Marine	VEVGDLVKHNGYLAIVIVSNAYETLIKWLDDGEIEDADNYTIGLEVISESG
Ga0209434_10577682	3300025122	Marine	VKVGDLVMCNEYLAIVIVSDACETLIRWLDDGVVEDADNYTLGLELISESR
Ga0209128_10142173	3300025131	Marine	VQVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEVVSESR
Ga0209232_11490722	3300025132	Marine	MKVGDLVEHNGYLALVVCANAFETLIKWLDDGIVEDADNYTIGLEVISESR
Ga0208299_100037365	3300025133	Marine	MKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLEIVSESR
Ga0208299_100507817	3300025133	Marine	VKVGDLVTSNGHLALVVVSNAYETLVEWLDDGIVEDADNYSLSLEVVSESR
Ga0208299_103610810	3300025133	Marine	VQVGDLVEHSGYLGLIICANDFETLIRWLDDGTVEDADNYTIGLEVVSESR
Ga0208299_10928055	3300025133	Marine	MKVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTI
Ga0209756_10041228	3300025141	Marine	VKVGDLVEHSGYLGLIICANDFETLVRWLDDGTVEDADNYTIGLEVVSESR
Ga0209756_10594873	3300025141	Marine	VKVGDLVEHNGYLALVICVESYETLIRWLDDGEVEDADNYTIGLEVVSESR
Ga0209756_10951552	3300025141	Marine	VEVGDLVKHNGYLAIVIVSNAYETLIKWLDDGEIEDADNYIIGLEVISESR
Ga0209645_10128698	3300025151	Marine	VIYYKSNNQKREKMKVGDLVRCGEYLAIVIVSDAYETLIRWLDDGVVEDANIYTTGLEVISESR
Ga0209645_10976883	3300025151	Marine	MKVGDLVKCNDYLAIVIVSNACETLIKWLDCGVVEDAAMYTTSLEIVSESR
Ga0207894_10150182	3300025268	Deep Ocean	MKVGDLVMCNEYLAIVIVSDAYETLIRWLDDGVVEDADNYTLGLELISASR
Ga0208766_11784292	3300026269	Marine	MQVGDLVEHNGYLALVICVESYETLIRWLDDGTVEDADNYTIGLKVINEAV
Ga0183748_10065477	3300029319	Marine	MKVGDLVRCRNHLAIVICVNAHETLIKWLDDGIVEDADNYTTSLEVISESR
Ga0183748_10509533	3300029319	Marine	MQVGDLVRCRNHLAIVICVNAHETLIKWLDDGTVEDADNYTIGLEVISASR
Ga0183748_10811233	3300029319	Marine	MKVGDLVRYNGYLAIVICVNAYETLIKWLDDGIVEDANNYTMGMEVISATR
Ga0183748_11210871	3300029319	Marine	MQVGDLVSSNGYLAIVICVNAYETLIKWLDDGIVEDADNYGTSLE
Ga0315331_102187001	3300031774	Seawater	VKVGDLVMSNGHVALVIVANAHETLIKWVDDGTVEDADNYTIGLEVISESR
Ga0315338_10510015	3300032138	Seawater	MKVGDLVRCNEHLAIVIVSDAYETLIRWLDDGVVEDANNYTLSLEIVNEAR
Ga0315338_11171195	3300032138	Seawater	VKVGDLVICNEHLAIVIVSDACETLIRWLDDGVVEDADNYTLGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084211

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences