Metagenome / Metatranscriptome Family F084207

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	61 residues
Representative Sequence	MERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGA
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.96 %
% of genes near scaffold ends (potentially truncated)	39.29 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.214 % of family members)
Environment Ontology (ENVO)	Unclassified (33.929 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.09% β-sheet: 17.05% Coil/Unstructured: 73.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04020	Phage_holin_4_2	3.57
PF14417	MEDS	2.68
PF03476	MOSC_N	2.68
PF01883	FeS_assembly_P	2.68
PF05977	MFS_3	1.79
PF03176	MMPL	1.79
PF07883	Cupin_2	1.79
PF06827	zf-FPG_IleRS	0.89
PF14588	YjgF_endoribonc	0.89
PF02653	BPD_transp_2	0.89
PF14707	Sulfatase_C	0.89
PF00884	Sulfatase	0.89
PF01391	Collagen	0.89
PF02518	HATPase_c	0.89
PF00990	GGDEF	0.89
PF05638	T6SS_HCP	0.89
PF01551	Peptidase_M23	0.89
PF03600	CitMHS	0.89
PF00248	Aldo_ket_red	0.89
PF05974	DUF892	0.89
PF00230	MIP	0.89
PF11937	DUF3455	0.89
PF05239	PRC	0.89
PF13530	SCP2_2	0.89
PF00188	CAP	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	3.57
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	2.68
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.79
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.79
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.79
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.89
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.89
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.21 %
Unclassified	root	N/A	11.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.57 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.75 %
Unclassified	root	N/A	11.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.11 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	12.50 %
Unclassified	root	N/A	11.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	41.96 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	11.61 %
Unclassified	root	N/A	11.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	41.96 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	11.61 %
Unclassified	root	N/A	11.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	41.96 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	11.61 %
Unclassified	root	N/A	11.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %
Krasilnikoviella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Krasilnikoviella	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	41.96 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	11.61 %
Unclassified	root	N/A	11.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %
Krasilnikoviella flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Krasilnikoviella → Krasilnikoviella flava	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102778037	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2026	Open in IMG/M
3300000956\|JGI10216J12902_115590805	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300003993\|Ga0055468_10007142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1987	Open in IMG/M
3300003996\|Ga0055467_10135748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300004114\|Ga0062593_101004132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300004157\|Ga0062590_101978283	Not Available	604	Open in IMG/M
3300004157\|Ga0062590_102416800	Not Available	555	Open in IMG/M
3300004463\|Ga0063356_102005463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	876	Open in IMG/M
3300004463\|Ga0063356_103194704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300004463\|Ga0063356_105454947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	546	Open in IMG/M
3300004480\|Ga0062592_100812709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300004643\|Ga0062591_100052512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2338	Open in IMG/M
3300005093\|Ga0062594_100048503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2150	Open in IMG/M
3300005294\|Ga0065705_11068932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300005334\|Ga0068869_101887878	Not Available	535	Open in IMG/M
3300005356\|Ga0070674_100546078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	971	Open in IMG/M
3300005441\|Ga0070700_100530448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	911	Open in IMG/M
3300005467\|Ga0070706_100527763	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005518\|Ga0070699_100061291	All Organisms → cellular organisms → Bacteria	3260	Open in IMG/M
3300005536\|Ga0070697_100049025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3426	Open in IMG/M
3300005564\|Ga0070664_101130804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	738	Open in IMG/M
3300006573\|Ga0074055_10176471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	999	Open in IMG/M
3300006574\|Ga0074056_11532666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1431	Open in IMG/M
3300006579\|Ga0074054_10661212	Not Available	538	Open in IMG/M
3300006581\|Ga0074048_11589101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300006844\|Ga0075428_100304313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1714	Open in IMG/M
3300006876\|Ga0079217_10662299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300006914\|Ga0075436_101398521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300006918\|Ga0079216_10240550	Not Available	1026	Open in IMG/M
3300006918\|Ga0079216_10809301	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006918\|Ga0079216_10816770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300009094\|Ga0111539_11663017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	740	Open in IMG/M
3300009098\|Ga0105245_10832659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	962	Open in IMG/M
3300009148\|Ga0105243_10791593	All Organisms → cellular organisms → Bacteria → Terrabacteria group	934	Open in IMG/M
3300009177\|Ga0105248_12226057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300009789\|Ga0126307_10011490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6461	Open in IMG/M
3300009789\|Ga0126307_10256952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1404	Open in IMG/M
3300010036\|Ga0126305_10770894	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300010037\|Ga0126304_10032836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Krasilnikoviella → Krasilnikoviella flava	3064	Open in IMG/M
3300010039\|Ga0126309_10042855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2127	Open in IMG/M
3300010039\|Ga0126309_10715516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300010166\|Ga0126306_10017123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4727	Open in IMG/M
3300010166\|Ga0126306_10707362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300010399\|Ga0134127_12278404	Not Available	621	Open in IMG/M
3300010400\|Ga0134122_13308278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012530\|Ga0136635_10126832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300012680\|Ga0136612_10512390	Not Available	609	Open in IMG/M
3300012897\|Ga0157285_10375293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012908\|Ga0157286_10324281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300012913\|Ga0157298_10345714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300012916\|Ga0157310_10473372	Not Available	539	Open in IMG/M
3300013306\|Ga0163162_12583792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300013308\|Ga0157375_12404427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300014267\|Ga0075313_1030451	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300014268\|Ga0075309_1044915	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300014270\|Ga0075325_1092251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	704	Open in IMG/M
3300014302\|Ga0075310_1162254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	515	Open in IMG/M
3300014745\|Ga0157377_10048419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2385	Open in IMG/M
3300015200\|Ga0173480_10438385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300015371\|Ga0132258_10631044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2693	Open in IMG/M
3300015372\|Ga0132256_100113576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2659	Open in IMG/M
3300015374\|Ga0132255_101942451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300015374\|Ga0132255_105487747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	537	Open in IMG/M
3300017792\|Ga0163161_11844691	Not Available	538	Open in IMG/M
3300017965\|Ga0190266_10139469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300017965\|Ga0190266_11277323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300018056\|Ga0184623_10168844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1010	Open in IMG/M
3300018422\|Ga0190265_10138901	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300018422\|Ga0190265_13186483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300018422\|Ga0190265_13596659	Not Available	517	Open in IMG/M
3300018422\|Ga0190265_13687838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300018465\|Ga0190269_11083592	Not Available	616	Open in IMG/M
3300018466\|Ga0190268_10022732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	2075	Open in IMG/M
3300018466\|Ga0190268_11265477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300018466\|Ga0190268_11288195	Not Available	615	Open in IMG/M
3300018466\|Ga0190268_11655069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300018469\|Ga0190270_10003153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8186	Open in IMG/M
3300018469\|Ga0190270_10011761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5001	Open in IMG/M
3300018469\|Ga0190270_10292483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1446	Open in IMG/M
3300018469\|Ga0190270_10618749	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300018469\|Ga0190270_11238918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300018481\|Ga0190271_10178198	All Organisms → cellular organisms → Bacteria	2089	Open in IMG/M
3300018481\|Ga0190271_11723568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300019356\|Ga0173481_10888380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300025901\|Ga0207688_10325016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300025908\|Ga0207643_10300281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	999	Open in IMG/M
3300025926\|Ga0207659_10020343	All Organisms → cellular organisms → Bacteria	4386	Open in IMG/M
3300025927\|Ga0207687_11193180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	654	Open in IMG/M
3300025931\|Ga0207644_11609683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	545	Open in IMG/M
3300025932\|Ga0207690_11645646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	536	Open in IMG/M
3300025933\|Ga0207706_10211499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300025937\|Ga0207669_10181580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1509	Open in IMG/M
3300025940\|Ga0207691_10191959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1781	Open in IMG/M
3300025941\|Ga0207711_11775998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300026121\|Ga0207683_10436881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1206	Open in IMG/M
3300028589\|Ga0247818_11035947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300028771\|Ga0307320_10289882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300030336\|Ga0247826_10311764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1132	Open in IMG/M
3300030336\|Ga0247826_10628425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300031226\|Ga0307497_10477708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300031228\|Ga0299914_10611980	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031229\|Ga0299913_11127801	Not Available	746	Open in IMG/M
3300031229\|Ga0299913_11535588	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300031562\|Ga0310886_11009245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300031731\|Ga0307405_10852504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300031903\|Ga0307407_11538090	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300031995\|Ga0307409_101366704	All Organisms → cellular organisms → Bacteria → Terrabacteria group	734	Open in IMG/M
3300031995\|Ga0307409_102866023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300032002\|Ga0307416_103629918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300032126\|Ga0307415_100082604	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300032126\|Ga0307415_100711068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300033550\|Ga0247829_10563561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	946	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.07%
Host-Associated	Host-Associated	33.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.61%
Plants	Host-Associated → Plants	33.93%
Aquatic	Environmental → Aquatic	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.71%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Marine	Environmental → Aquatic → Marine	1.79%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Loam	Environmental → Terrestrial → Soil → Loam	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Ice	Environmental → Aquatic → Freshwater → Ice	1.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.21%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.57%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1027780374	3300000956	Soil	MESERATGGDVHVLACAECPRVSSVSARGWKAFRSDDPEVDELPRLSFYCPECAKREFGR
JGI10216J12902_1155908052	3300000956	Soil	MMRAGMDRGTFTDVHVLACVECPRVSSATAKGWRAYRTDDPELEEPPKLSFYCPDCARREFDSA*
Ga0055468_100071423	3300003993	Natural And Restored Wetlands	VETDRDQGSVHVLACAECPRVSTVTARGWKAYLSDDPEEGGVPTLAFYCPDCSRREFASG
Ga0055467_101357481	3300003996	Natural And Restored Wetlands	VETDRDQGSVHVLACAECPRVSTVTARGWRAYLSDDPEDDGVPTLAFYCPDCSRRE
Ga0062593_1010041323	3300004114	Soil	MGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0062590_1019782831	3300004157	Soil	MATDRRTSEDVRVLACAECPRVNSINARGWKAYRADDPEYDEPPRLAFYWY*
Ga0062590_1024168001	3300004157	Soil	MANDPETRADVHVLACAECPRVSTVSARGWKAYRTDDPELDEPPRLTLYCPDC
Ga0063356_1020054632	3300004463	Arabidopsis Thaliana Rhizosphere	MRAGMDPGTFTDVHVLACVECPRVSSVTAKGWRAYRTDDPELEEPPKLSFYCPECARREFDGG*
Ga0063356_1031947041	3300004463	Arabidopsis Thaliana Rhizosphere	MGDDRETTEDVHVLACAECPRVSSISARGWKAYRVDDPDEDGPPQLAFYCPECAAREAGDR*
Ga0063356_1054549472	3300004463	Arabidopsis Thaliana Rhizosphere	MEREPATGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEVPQLSFYCPECARREFSS
Ga0062592_1008127091	3300004480	Soil	MATDRRASEDVHVLACAECPRVSGITVRGWKAYRTDDPLSDEPPALAFYCPECAEREF
Ga0062591_1000525122	3300004643	Soil	VRSDHVAVETDHAATDQVHVLACAECPRVSSVTARGWKAYRTDGPETDEPPQLTFYCPECARHEFAGGSAG*
Ga0062594_1000485031	3300005093	Soil	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS*
Ga0065705_110689322	3300005294	Switchgrass Rhizosphere	MDRSRTSEDVHVLACAECPRVSGITARGWKAYRTDVPLEDERPQLTFYCPECARREFGKGPSH*
Ga0068869_1018878781	3300005334	Miscanthus Rhizosphere	MERKRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECA
Ga0070674_1005460781	3300005356	Miscanthus Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEQEFGAS*
Ga0070700_1005304481	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS*
Ga0070706_1005277633	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MERRGTSEDVHVLACAECPRVSGITARGWKAYRTDVPLEDERPQLTFYCPECARREFGKGPSQ*
Ga0070699_1000612914	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLACAECPRVSGITARGWKAYRTDVPLEDERPQLTFYCPECARREFGKGPSQ*
Ga0070697_1000490252	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRETSQEVHVLACVECPRVSSVSARGWKAYRVEDPDRDEPPQLAFYCPECAARESGGR*
Ga0070664_1011308043	3300005564	Corn Rhizosphere	PSVEREPAMGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0074055_101764711	3300006573	Soil	VGDDHQAMERRRATDQDVHVLACAECPRVSSVNARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGD
Ga0074056_115326661	3300006574	Soil	VGDDHQAMERRRATDQDVHVLACAECPRVSSVNARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS*
Ga0074054_106612121	3300006579	Soil	VGDDHQAMERRRATDQDVHVLACAECPRVSSVNARGWKAFRSDDPEVDEHPRLSFYCPEC
Ga0074048_115891011	3300006581	Soil	MGEEATEGYVHVLACVECPRVSSLTARGWRAYRVDDPEQDDPPALAFYC
Ga0075428_1003043133	3300006844	Populus Rhizosphere	MDRGITSDVHVLACIECPRVSSAGARGWRAYRTDDPEFDEPPKLSFYCPDCARREFGNNVDG*
Ga0079217_106622994	3300006876	Agricultural Soil	SAIDPVETNRATDVHVLACAECPRVSTVNARGWKAYRSDDPETNEPPQLTLYCPDCSRREFGPR*
Ga0075436_1013985211	3300006914	Populus Rhizosphere	MEREPATGADVHVLACAECPRVSSVSARGWKAFRTDDPELDELPQLSFYCPECARREFGG
Ga0079216_102405503	3300006918	Agricultural Soil	MESDRTASDIHVLACVECPRVSTATARGWKAHRVDDPDEEGPPELAFYCPACAP*
Ga0079216_108093012	3300006918	Agricultural Soil	MASDPFTTGAVHVLPCAECPRVSSASARGWRAYRADDPETDEPPRLAFYCPECACREFGSR*
Ga0079216_108167702	3300006918	Agricultural Soil	MQAMERDRATSGEVHVLACTECPRVSSVTARGWEAHRIDDPFTSERPALAFYCPDCARRDFGRRAR*
Ga0111539_116630171	3300009094	Populus Rhizosphere	MQAMEREPATGADVHVLACAECPRVSSVSARGWKAFRTDDPELDELPQLSFYCPECARREFGG*
Ga0105245_108326592	3300009098	Miscanthus Rhizosphere	GADVHVLACAECPRVSSITARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0105243_107915932	3300009148	Miscanthus Rhizosphere	MERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEQEFGAS*
Ga0105248_122260571	3300009177	Switchgrass Rhizosphere	VVEPAAAGDHASVEREPAMGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0126307_100114907	3300009789	Serpentine Soil	MIRAMERDRATSGEVHVLACTECPRVSSVTARGWEAHRIDDPFACDRPALAFYCPDCARRVFGRRER*
Ga0126307_102569524	3300009789	Serpentine Soil	MEPRIIRDVHVLACVECPRVSSASARGWRAYRTDDPELDEPPKLSFYCPECARREFGT*
Ga0126305_107708943	3300010036	Serpentine Soil	DRRATDDVHVLACAECPRVSSVSARGWKAYRSDDPETDEPPELAFYCPDCARREFGQQCPDAS*
Ga0126304_100328364	3300010037	Serpentine Soil	MIRAMERDRATSGEVHVLACTECPRVSSVTARGWEAHRIDHPFACVRPALAFYCPDCARRVFGRRER*
Ga0126309_100428555	3300010039	Serpentine Soil	MANDHQVVETERSQEAVHVLACAECPRVSSVSARGWKGYRSDDPDEDGPPTLAFYCPD
Ga0126309_107155161	3300010039	Serpentine Soil	HVLACAECPRVSSVSARGWKGYRSDDPDEDGPPTLAFYCPDCSRREFGSG*
Ga0126306_100171233	3300010166	Serpentine Soil	MIRAMERDRATSGEVHVLACTECPRVSSVTARGWEAHRIDDPFACVRPALAFYCPDCARRVFGRRER*
Ga0126306_107073621	3300010166	Serpentine Soil	MSSKRADIEDVHVLACAECRRVSSISARGWKAYRAEDLESEEPPQLAFYCPQCARREFGQQ*
Ga0134127_122784041	3300010399	Terrestrial Soil	MERRGTSEDVHVLACAECPRVSSITARGWKAYRVDDPEYDDPPRLVFFCWDGDRRE
Ga0134122_133082781	3300010400	Terrestrial Soil	VGDDHQAMERRRATDQDVHVLACECPRVSSVTARGWKAFRSDDPELDENPRLSFYCPECAEREFGAR*
Ga0136635_101268322	3300012530	Polar Desert Sand	VHIFGCAECPRVSSATARGWKAYRVDDPEEDEVPALAFYCSNCARREFG*
Ga0136612_105123901	3300012680	Polar Desert Sand	MGTDHIATEDVHVLACAECPRVSSVTARGWKAYMTDDPYGDEPPELAFYCPDCSRK*
Ga0157285_103752931	3300012897	Soil	REPAMGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0157286_103242812	3300012908	Soil	MATDRRTNEDVHVLACAECPRVSGITARGWKAYRTDDPLEGELPRLAFYCPECARHEFGARAGE*
Ga0157298_103457141	3300012913	Soil	MRDGSGTSQDVHVLACAECPRVSSITARGWKAYRVDDPEYDDPPRLAFYCPDCARREFEEGFGGY*
Ga0157310_104733722	3300012916	Soil	MGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECA
Ga0163162_125837921	3300013306	Switchgrass Rhizosphere	SVAEPVVGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS*
Ga0157375_124044271	3300013308	Miscanthus Rhizosphere	GVVEPAAAGDHPSVEREPAMSADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0075313_10304512	3300014267	Natural And Restored Wetlands	VETDRDQGSVHVLACAECPRVSTVTARGWKAYLSDDPEEDGVPTLAFYCPDCSRREFASG
Ga0075309_10449152	3300014268	Natural And Restored Wetlands	VETDRDQGYVHVLACAECPRVSTVTARGWKAYLSDDPEEGGVPTLAFYCPDCSRREFASG
Ga0075325_10922511	3300014270	Natural And Restored Wetlands	VETDRDQGSVHVLACAECPRVSTVTARGWRAYLSDDPEDDGVPTLAFYCPDCSRREFADG
Ga0075310_11622541	3300014302	Natural And Restored Wetlands	TRDHAIVETDRDQGSVHVLACAECPRVSTVTARGWRAYLSDDPEEDGVPTLAFYCPDCSRREFAAG*
Ga0157377_100484191	3300014745	Miscanthus Rhizosphere	VLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0173480_104383851	3300015200	Soil	DVHVLACAECPRVSGITARGWKAYRTDDPLEGEPPRLAFYCPECARHEFGARAGE*
Ga0132258_106310441	3300015371	Arabidopsis Rhizosphere	MEREPATGADVHVLACAECPRVSSVSARGWKAFRTDDPELDELPQLSFYCPECARREFSC
Ga0132256_1001135764	3300015372	Arabidopsis Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPELDEQPRLSFYCPDCAEREFGSS*
Ga0132255_1019424511	3300015374	Arabidopsis Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVNARGWKAFRSDDPEVDEHPRLSFYCPECAEREFG
Ga0132255_1054877472	3300015374	Arabidopsis Rhizosphere	MGADVHVLACAECPRVSSICARGWKAFRTDDPELDEPPQLSFYCPECARREFSG*
Ga0163161_118446911	3300017792	Switchgrass Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCP
Ga0190266_101394691	3300017965	Soil	MGADVHVLACAECPRVSSVSARGWKAFRTDDPEANELPQLSFYCPDCARREFSGS
Ga0190266_112773232	3300017965	Soil	DDPAVETDRTANGEVHVLACAECPRVSSATAAGWRGYRSDDPETEPPRLAFFCPECARREFGDV
Ga0184623_101688441	3300018056	Groundwater Sediment	MGTERETSEGVHVLACAECPRVSSLTARGWKAYRVDAPERDGPPQLVFYCPECAAKESGS
Ga0190265_101389012	3300018422	Soil	MADRSETEREVHVLACAECPRVSTVTARGWKAYRSDDPETDEAPRLAFFCPDCAEREFDF
Ga0190265_131864832	3300018422	Soil	ARSPPMGSDRATDDVHVLACMECPRVSSIAARGWRAYRVDDPEDDEQPTLPFYCPVCSQREFESHAD
Ga0190265_135966591	3300018422	Soil	DRATDDAHVLACAECPRVSSVTARGWRAYRVDDPKASEPPELAFYCPLCTSAGVRKSCQL
Ga0190265_136878382	3300018422	Soil	STDPSATDQVHVLACAECPRVSSASARSWKGYRVDDPETDEPPRLAFYCPDCARREFEPR
Ga0190269_110835922	3300018465	Soil	VANEHRNASDDVHVLACAACPRVSSIEARGWKAYRVDDPCEDLVPVLAFYCPDCTPDD
Ga0190268_100227323	3300018466	Soil	AKPALTRDHQPVESERASGQYVHVLACAECPRVSSVSARGWKAFRSDDPDADEEPRLAFYCPECAQREFGGS
Ga0190268_112654772	3300018466	Soil	MGDDRETTEDVHVLACAECPRVSSISARGWKAYRVDDPDHDGPPQLAFYCPECAARESGN
Ga0190268_112881952	3300018466	Soil	MERDRATSSEVHVLACTECPRVSSVTARGWEAHRIDDPFAGDRPGLAFYCPDCARGVFGRRER
Ga0190268_116550691	3300018466	Soil	MGDDRETTEDVHVLACAECPRVSSISARGWKAYRVDDPDEDGPPQLAFYCPECAAREAGD
Ga0190270_1000315310	3300018469	Soil	MERRRATDQDVHVLACAECPRISSVSARGWKAFRSDDPEVDEHPRLSFYCPECAEQEFGT
Ga0190270_100117612	3300018469	Soil	MGDDRETTEDVHVLACAECPRVSSITARGWKAYRVDDPDHDGPPQLAFYCPECAARESGD
Ga0190270_102924831	3300018469	Soil	MESERATGGDVHVLACAECPRVSSVSARGWKAFRSDDPEVDEQPRLSFYCPECARREFGS
Ga0190270_106187491	3300018469	Soil	MERDRATSGEVHVLACTECPRVSSVTARGWEAHRIDDPFASERPGLAFYCPDCARRVFGRRER
Ga0190270_112389182	3300018469	Soil	MADDRETTEDVHVLACAECPRVSSISARGWKAYRVDDPDHDGPPQLAFYCPDCAARETGD
Ga0190271_101781982	3300018481	Soil	MESDRATGGDVHVLACAECPRVSSVSARGWKAFRSDDPEVDEQPRLSFYCPECARREFGS
Ga0190271_117235681	3300018481	Soil	MIIRAMERRRATDQDVHVLACAECPRVSSVSARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS
Ga0173481_108883801	3300019356	Soil	MMRAGMDRGTFTDVHVLACVECPRVSSATAKGWRAYRTDDPELEEPPKLSFYCPDCARREFDSA
Ga0207688_103250162	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGTD
Ga0207643_103002812	3300025908	Miscanthus Rhizosphere	QPGRAALGEQAPARDHPSVEREPAMGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG
Ga0207659_100203437	3300025926	Miscanthus Rhizosphere	MGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG
Ga0207687_111931802	3300025927	Miscanthus Rhizosphere	CAECPRVSSVSAREWKAFRTDDPELDEPPQLSFYCPECARREFSG
Ga0207644_116096831	3300025931	Switchgrass Rhizosphere	MGADVHVLACAECPRVSSVSARGWKAVRTDDPELDEPPQLSFYCPECARREFSG
Ga0207690_116456461	3300025932	Corn Rhizosphere	MGADVHVLACAECPRVSSISARGWKAFRTDDPELDEPPQLSFYCPECARREFSG
Ga0207706_102114992	3300025933	Corn Rhizosphere	MERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGA
Ga0207669_101815801	3300025937	Miscanthus Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEQEFGAS
Ga0207691_101919591	3300025940	Miscanthus Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS
Ga0207711_117759981	3300025941	Switchgrass Rhizosphere	VGDDHQAMERRRATDQDVHVLACAECPRVSSVTARGWKAFRSDDPEVDEHPRLSFYCPECAEREF
Ga0207683_104368811	3300026121	Miscanthus Rhizosphere	LWGVVEPAEAGDHPSVEREPAMGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSG
Ga0247818_110359471	3300028589	Soil	MERRRATDQDVHVLACSECPRVSSVSARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGA
Ga0307320_102898821	3300028771	Soil	MERKRATDQDVHVLACAECPRVSTVSARGWKAFRSDDPEGDEQPRLSFYCPECAAREF
Ga0247826_103117641	3300030336	Soil	VLACVECPRVSSVTAKGWRAYRTDDPELEEPPKLSFYCPECARREFDGG
Ga0247826_106284252	3300030336	Soil	VGDDHQAMERRRATDQDVHVLACAECPRVSSVNARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS
Ga0307497_104777081	3300031226	Soil	VGDDHQAMERRRATDQDVHVLACAECPRVSSVSARGWKAFRSDDPEVDEHPRLSFYCPECAEREFGAS
Ga0299914_106119802	3300031228	Soil	VETDRDQGSVHVLACAECPRVSTVTARGWRAYLSDDPEEDGVPTLAFYCPDCSRREFASG
Ga0299913_111278011	3300031229	Soil	LVHVLACAECPRVSSVTARGWTAHRSDDPEEDGPPTLAFYCPDCSRREVSSD
Ga0299913_115355882	3300031229	Soil	RDHAIVETDRDQSSVHVLACAECPRVSTVTARGWRAYLSDDPEEDGVPTLAFYCPDCSRREFASG
Ga0310886_110092451	3300031562	Soil	EPHLWGVVERASAGDHPGVEREPAMGADVHVLACAECPRVSSVSARGWKAFRTDDPELDEPPQLSFYCPECARREFSS
Ga0307405_108525042	3300031731	Rhizosphere	VENDVGAEVHVFGCAECPRVSSRFATGWKAYRVDDPELDEEPSLAFYCRECARREFGRSS
Ga0307407_115380901	3300031903	Rhizosphere	ACTECPRVSSVTARGWEAHRIDDPFASERPALAFYCPDCARRVFGRRER
Ga0307409_1013667042	3300031995	Rhizosphere	QAMERDRATSGEVHVLACTECPRVSSVTARGWEAHRIDDPFTSERPALAFYCPDCARRVFGRRER
Ga0307409_1028660231	3300031995	Rhizosphere	VGAEVHVFGCAECPRVSSRFATGWKAYRVDDPELDEEPSLAFYCRNCAR
Ga0307416_1036299182	3300032002	Rhizosphere	VGAEVHVFGCAECPRVSSRFATGWKAYRVDDPELDEEPSLAFYCRECARREFGR
Ga0307415_1000826041	3300032126	Rhizosphere	DDDADVENDVGAEVHVFGCAECPRVSSRFATGWKAYRVDDPELDEEPSLAFYCRECARREFGRSS
Ga0307415_1007110681	3300032126	Rhizosphere	TDHRTSETVHVLACADCPRVSSAGARGWKAYRTDDPWELEPTELAFYCPDCARRAFGTPG
Ga0247829_105635611	3300033550	Soil	MEREPATGADVHVLACAECPRVSSVSARGWKAFRTDDPEADEPPQLSFYCPECARREFSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084207

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences