Metagenome Family F084046

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084046
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	90 residues
Representative Sequence	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMVQEKEGGS
Number of Associated Samples	78
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	81.25 %
% of genes near scaffold ends (potentially truncated)	25.89 %
% of genes from short scaffolds (< 2000 bps)	69.64 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (50.893 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (52.679 % of family members)
Environment Ontology (ENVO)	Unclassified (47.321 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.96% β-sheet: 0.00% Coil/Unstructured: 38.04%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03237	Terminase_6N	16.07
PF00211	Guanylate_cyc	2.68
PF01972	SDH_sah	1.79
PF02735	Ku	1.79
PF03354	TerL_ATPase	0.89
PF13414	TPR_11	0.89
PF13181	TPR_8	0.89
PF04679	DNA_ligase_A_C	0.89
PF07362	CcdA	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.57
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.68
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	1.79
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.89
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.89
COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.89 %
Unclassified	root	N/A	48.21 %
Viruses	superkingdom	All Organisms → Viruses	0.89 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	50.89 %
Unclassified	root	N/A	48.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	31.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	29.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	29.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	29.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10006030	All Organisms → cellular organisms → Archaea	4475	Open in IMG/M
3300002562\|JGI25382J37095_10104074	Not Available	997	Open in IMG/M
3300002908\|JGI25382J43887_10048679	All Organisms → cellular organisms → Archaea	2303	Open in IMG/M
3300002914\|JGI25617J43924_10015455	Not Available	2575	Open in IMG/M
3300005167\|Ga0066672_10028770	All Organisms → cellular organisms → Archaea → TACK group	3010	Open in IMG/M
3300005167\|Ga0066672_10444983	Not Available	846	Open in IMG/M
3300005172\|Ga0066683_10439097	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	802	Open in IMG/M
3300005175\|Ga0066673_10014286	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3506	Open in IMG/M
3300005176\|Ga0066679_10010355	All Organisms → cellular organisms → Archaea	4592	Open in IMG/M
3300005180\|Ga0066685_10087909	All Organisms → cellular organisms → Archaea	2060	Open in IMG/M
3300005181\|Ga0066678_10348379	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	977	Open in IMG/M
3300005450\|Ga0066682_10075142	Not Available	2091	Open in IMG/M
3300005468\|Ga0070707_100014400	Not Available	7414	Open in IMG/M
3300005471\|Ga0070698_100908284	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	826	Open in IMG/M
3300005536\|Ga0070697_100004585	All Organisms → cellular organisms → Archaea	10614	Open in IMG/M
3300005552\|Ga0066701_10530376	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	726	Open in IMG/M
3300005556\|Ga0066707_10567867	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	729	Open in IMG/M
3300005557\|Ga0066704_10031277	All Organisms → cellular organisms → Archaea	3249	Open in IMG/M
3300005557\|Ga0066704_10228982	Not Available	1260	Open in IMG/M
3300005558\|Ga0066698_10357649	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1008	Open in IMG/M
3300005561\|Ga0066699_10752423	Not Available	690	Open in IMG/M
3300005598\|Ga0066706_10008445	All Organisms → cellular organisms → Archaea	5468	Open in IMG/M
3300006791\|Ga0066653_10043628	All Organisms → cellular organisms → Archaea	1836	Open in IMG/M
3300006796\|Ga0066665_10308998	All Organisms → cellular organisms → Archaea	1274	Open in IMG/M
3300006800\|Ga0066660_10260531	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1362	Open in IMG/M
3300007258\|Ga0099793_10068734	All Organisms → cellular organisms → Archaea	1596	Open in IMG/M
3300007258\|Ga0099793_10189418	Not Available	984	Open in IMG/M
3300007258\|Ga0099793_10548164	Not Available	577	Open in IMG/M
3300007265\|Ga0099794_10074809	All Organisms → cellular organisms → Archaea	1664	Open in IMG/M
3300007265\|Ga0099794_10453193	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	673	Open in IMG/M
3300009038\|Ga0099829_10263927	Not Available	1406	Open in IMG/M
3300009038\|Ga0099829_10572133	Not Available	939	Open in IMG/M
3300009038\|Ga0099829_10816461	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	774	Open in IMG/M
3300009038\|Ga0099829_11220926	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	622	Open in IMG/M
3300009088\|Ga0099830_10998480	Not Available	693	Open in IMG/M
3300009088\|Ga0099830_11192076	Not Available	632	Open in IMG/M
3300009089\|Ga0099828_10231923	All Organisms → cellular organisms → Archaea	1652	Open in IMG/M
3300009089\|Ga0099828_10679852	Not Available	925	Open in IMG/M
3300009090\|Ga0099827_10009664	Not Available	6141	Open in IMG/M
3300009090\|Ga0099827_11917523	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	516	Open in IMG/M
3300009137\|Ga0066709_100016733	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7135	Open in IMG/M
3300010335\|Ga0134063_10208317	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	922	Open in IMG/M
3300011269\|Ga0137392_10375602	Not Available	1179	Open in IMG/M
3300011269\|Ga0137392_11208222	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	614	Open in IMG/M
3300011270\|Ga0137391_10195263	All Organisms → cellular organisms → Archaea	1762	Open in IMG/M
3300011270\|Ga0137391_10706485	Not Available	837	Open in IMG/M
3300011270\|Ga0137391_10754348	Not Available	805	Open in IMG/M
3300011271\|Ga0137393_10529298	Not Available	1011	Open in IMG/M
3300011271\|Ga0137393_10878154	Not Available	765	Open in IMG/M
3300012096\|Ga0137389_10132215	All Organisms → cellular organisms → Archaea	2025	Open in IMG/M
3300012096\|Ga0137389_10431174	Not Available	1128	Open in IMG/M
3300012189\|Ga0137388_10561019	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1061	Open in IMG/M
3300012189\|Ga0137388_10813191	Not Available	866	Open in IMG/M
3300012189\|Ga0137388_11168583	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	707	Open in IMG/M
3300012198\|Ga0137364_10730139	Not Available	748	Open in IMG/M
3300012198\|Ga0137364_10824242	Not Available	701	Open in IMG/M
3300012199\|Ga0137383_10621139	Not Available	790	Open in IMG/M
3300012201\|Ga0137365_10078658	Not Available	2486	Open in IMG/M
3300012201\|Ga0137365_10714703	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	732	Open in IMG/M
3300012201\|Ga0137365_11356434	Not Available	502	Open in IMG/M
3300012202\|Ga0137363_10650827	Not Available	891	Open in IMG/M
3300012202\|Ga0137363_11553356	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	553	Open in IMG/M
3300012206\|Ga0137380_10486974	Not Available	1088	Open in IMG/M
3300012207\|Ga0137381_10097336	Not Available	2491	Open in IMG/M
3300012209\|Ga0137379_11165813	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	677	Open in IMG/M
3300012210\|Ga0137378_10139331	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2245	Open in IMG/M
3300012349\|Ga0137387_10071654	Not Available	2362	Open in IMG/M
3300012349\|Ga0137387_11271910	Not Available	516	Open in IMG/M
3300012351\|Ga0137386_10873162	Not Available	645	Open in IMG/M
3300012356\|Ga0137371_10594382	Not Available	850	Open in IMG/M
3300012356\|Ga0137371_10798486	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	719	Open in IMG/M
3300012361\|Ga0137360_11194355	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	658	Open in IMG/M
3300012362\|Ga0137361_10229159	Not Available	1688	Open in IMG/M
3300012363\|Ga0137390_10262365	All Organisms → cellular organisms → Archaea	1713	Open in IMG/M
3300012363\|Ga0137390_10265150	Not Available	1703	Open in IMG/M
3300012363\|Ga0137390_11763631	Not Available	551	Open in IMG/M
3300012918\|Ga0137396_11160019	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	548	Open in IMG/M
3300012927\|Ga0137416_11978345	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	534	Open in IMG/M
3300014154\|Ga0134075_10041006	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1899	Open in IMG/M
3300017654\|Ga0134069_1262837	Not Available	603	Open in IMG/M
3300017659\|Ga0134083_10285444	Not Available	697	Open in IMG/M
3300018482\|Ga0066669_10007135	All Organisms → cellular organisms → Archaea	5373	Open in IMG/M
3300021046\|Ga0215015_10092967	All Organisms → cellular organisms → Archaea	7331	Open in IMG/M
3300021046\|Ga0215015_10996202	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1985	Open in IMG/M
3300025922\|Ga0207646_10005192	Not Available	13768	Open in IMG/M
3300026295\|Ga0209234_1313452	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	504	Open in IMG/M
3300026296\|Ga0209235_1033026	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2649	Open in IMG/M
3300026297\|Ga0209237_1134103	Not Available	1007	Open in IMG/M
3300026325\|Ga0209152_10003915	Not Available	5544	Open in IMG/M
3300026328\|Ga0209802_1043644	All Organisms → cellular organisms → Archaea → TACK group	2263	Open in IMG/M
3300026328\|Ga0209802_1209908	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	737	Open in IMG/M
3300026329\|Ga0209375_1037576	Not Available	2542	Open in IMG/M
3300026332\|Ga0209803_1030321	Not Available	2566	Open in IMG/M
3300026334\|Ga0209377_1014700	All Organisms → cellular organisms → Archaea	4196	Open in IMG/M
3300026343\|Ga0209159_1143609	Not Available	954	Open in IMG/M
3300026480\|Ga0257177_1024026	Not Available	878	Open in IMG/M
3300026499\|Ga0257181_1012704	Not Available	1157	Open in IMG/M
3300026538\|Ga0209056_10093789	All Organisms → Viruses → Predicted Viral	2476	Open in IMG/M
3300026538\|Ga0209056_10282329	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1159	Open in IMG/M
3300026548\|Ga0209161_10013615	All Organisms → cellular organisms → Archaea	6040	Open in IMG/M
3300026548\|Ga0209161_10406862	Not Available	598	Open in IMG/M
3300026551\|Ga0209648_10010786	All Organisms → cellular organisms → Archaea	7932	Open in IMG/M
3300027643\|Ga0209076_1025286	All Organisms → cellular organisms → Archaea	1634	Open in IMG/M
3300027643\|Ga0209076_1113933	Not Available	765	Open in IMG/M
3300027671\|Ga0209588_1000264	All Organisms → cellular organisms → Archaea	13876	Open in IMG/M
3300027846\|Ga0209180_10049343	Not Available	2318	Open in IMG/M
3300027846\|Ga0209180_10439159	Not Available	736	Open in IMG/M
3300027846\|Ga0209180_10619401	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	596	Open in IMG/M
3300027875\|Ga0209283_10436271	Not Available	850	Open in IMG/M
3300027875\|Ga0209283_10947473	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	517	Open in IMG/M
3300028673\|Ga0257175_1010331	Not Available	1401	Open in IMG/M
3300032180\|Ga0307471_100198455	Not Available	2004	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.54%
Loam	Environmental → Terrestrial → Soil → Loam	4.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	52.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_100060305	3300002561	Grasslands Soil	MNMQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYSEMTQEKEGGS*
JGI25382J37095_101040742	3300002562	Grasslands Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYSEMTQEKEGGS*
JGI25382J43887_100486794	3300002908	Grasslands Soil	MQTDSGADPDGKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRKRVGRDLHDEIDRLYHEMTQEKEGGS*
JGI25617J43924_100154555	3300002914	Grasslands Soil	MQTDSGADTDSKELLTNIKRLTRIVLDKLEEGSKEGSLDSAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS*
Ga0066672_100287704	3300005167	Soil	MQTDSGADPDRIELLASIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMIQEKEGES*
Ga0066672_104449831	3300005167	Soil	MQTDSGADTDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDLLYREMMQKKESGS*
Ga0066683_104390972	3300005172	Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEG
Ga0066673_100142863	3300005175	Soil	MQTDSGADPDRIELLASIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0066679_100103553	3300005176	Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMTQEKEGGS*
Ga0066685_100879091	3300005180	Soil	MQTDSGADPDGKELLANIEILTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGP*
Ga0066678_103483792	3300005181	Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMTQEKEGGS*
Ga0066682_100751422	3300005450	Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS*
Ga0070707_1000144003	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRALCLWLEARNPRPRRRFGRDLHDDIDRMFREMMQEKEGGS*
Ga0070698_1009082842	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQTPVSGADAESTELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEGGS*
Ga0070697_10000458512	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQSPDSGADHDRIELLANIRRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLRDNIDRMYREMVQEKEGGS*
Ga0066701_105303762	3300005552	Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRL*
Ga0066707_105678672	3300005556	Soil	MSLDSGAAGTEELLRNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEERNPRPRRRVGRDLHDEIDRLYREMMQEKEDGS*
Ga0066704_100312773	3300005557	Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEDGS*
Ga0066704_102289823	3300005557	Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAGNPRPRRRVGRDLHDDIDRLYREMMEEKEGGS*
Ga0066698_103576493	3300005558	Soil	MNMQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPPQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDGLYREMMQEKKGGS*
Ga0066699_107524232	3300005561	Soil	MQTDSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDLLYREMMQKKESGS*
Ga0066706_100084455	3300005598	Soil	MSLDSGAAGTEELLRNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYHEMTQEKEGGS*
Ga0066653_100436282	3300006791	Soil	VSRMNMQTDSGADPDSEELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS*
Ga0066665_103089981	3300006796	Soil	RLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEERNPRPRRRVGRDLHDEIDRLYREMMQEKEDGS*
Ga0066660_102605311	3300006800	Soil	MQTDSGADPDRIELLASIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMIQEKEGGS*
Ga0099793_100687343	3300007258	Vadose Zone Soil	MNMQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDSAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS*
Ga0099793_101894183	3300007258	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEMDRLYREMMQEKEAGS*
Ga0099793_105481642	3300007258	Vadose Zone Soil	KRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0099794_100748091	3300007265	Vadose Zone Soil	MKMQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPKPRRRVGRDLHDEIDRLYHEMIQEKEAGS*
Ga0099794_104531932	3300007265	Vadose Zone Soil	MQTDSGADRDGKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMVQEKEGGS*
Ga0099829_102639273	3300009038	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEGGS*
Ga0099829_105721333	3300009038	Vadose Zone Soil	MQADSGTDPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARKRVGRDLHDEIDRLYHEMMQEKEGGS*
Ga0099829_108164612	3300009038	Vadose Zone Soil	MSIDSGAAGTEELLGNIKRVTRIILDRLEEGSKEGSLDQAQMRLYGSILTRSLCLWLEALNPRPRRRVGREVHDEIDQLFREMKQEKESQL*
Ga0099829_112209261	3300009038	Vadose Zone Soil	MQIDSGADPDGKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMVQEKEGGS*
Ga0099830_109984801	3300009088	Vadose Zone Soil	ADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEGGS*
Ga0099830_111920761	3300009088	Vadose Zone Soil	ADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARKRVGRDLHDEIDRLYHEMMQEKEGGS*
Ga0099828_102319231	3300009089	Vadose Zone Soil	ADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARRRVGRDLHDEIDRLYHEMMQEKEGGS*
Ga0099828_106798521	3300009089	Vadose Zone Soil	ELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYHEMTQEKEGGS*
Ga0099827_100096643	3300009090	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYHEMMQEKEGGS*
Ga0099827_119175231	3300009090	Vadose Zone Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMRQEKEGGS*
Ga0066709_1000167335	3300009137	Grasslands Soil	MKMQTDSGADPDRIELLASIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0134063_102083172	3300010335	Grasslands Soil	MKTDSGADPDGKELLANIEILTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGP*
Ga0137392_103756023	3300011269	Vadose Zone Soil	MQADSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARKRVGRDLHDEIDRLYHEMMQEKEGGS*
Ga0137392_112082221	3300011269	Vadose Zone Soil	MQTDSGADPDGKELLANIKRLARIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMVQEKEGGS*
Ga0137391_101952633	3300011270	Vadose Zone Soil	MQTDSGADPDGKELLANIKRLARIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEI
Ga0137391_107064851	3300011270	Vadose Zone Soil	DPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARKRVGRDLHDEIDRLYHEMMQEKEGGS*
Ga0137391_107543482	3300011270	Vadose Zone Soil	MQIDSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMVQEKEGGS*
Ga0137393_105292983	3300011271	Vadose Zone Soil	MQIDSGADTDRTELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0137393_108781541	3300011271	Vadose Zone Soil	KRLTRIVLDKLEEGSKEGSVDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYREMTQEKEGGS*
Ga0137389_101322151	3300012096	Vadose Zone Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEG
Ga0137389_104311743	3300012096	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMRQEKEGGS*
Ga0137388_105610192	3300012189	Vadose Zone Soil	MSTDSGAAGTEELLGNIKRVTRIILDRLEEGSKEGSLDQAQMRLYGSILTRSLCLWLEALNPRPRRQVGRDVQDEIDRLFRERKQEKESEL*
Ga0137388_108131911	3300012189	Vadose Zone Soil	MQTDSGADPNSKELMTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMTQEKEGGS*
Ga0137388_111685831	3300012189	Vadose Zone Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEREGRT*
Ga0137364_107301392	3300012198	Vadose Zone Soil	MNMQTDSGADPDSEELLANIKRLTRIVLDKLEEGSKEGSLDSAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDDIDRLYHEMTQEKEGGS*
Ga0137364_108242422	3300012198	Vadose Zone Soil	SRMNMQTDSGADPDSEELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPTPRRRVGRDLHDDIDRLYREMMEEKEGGS*
Ga0137383_106211392	3300012199	Vadose Zone Soil	MSLDSGAAGTEELLGNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRVYHEMTQEKEGGS*
Ga0137365_100786581	3300012201	Vadose Zone Soil	MNMQTDSGADPDSEELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPTPRRRVGRDLHDDIDRLYREMMEEKEGGS*
Ga0137365_107147031	3300012201	Vadose Zone Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYHEMTQEKEGGS*
Ga0137365_113564342	3300012201	Vadose Zone Soil	ANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEDGS*
Ga0137363_106508272	3300012202	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0137363_115533562	3300012202	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYREMTQEKEGGS*
Ga0137380_104869743	3300012206	Vadose Zone Soil	MNMQTDSGADPDSEELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMTQEKEGGS*
Ga0137381_100973361	3300012207	Vadose Zone Soil	MQTDSGADTDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDL
Ga0137379_111658131	3300012209	Vadose Zone Soil	MSLDSGAAGTEELLGNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYHEMTQEKEGGS*
Ga0137378_101393311	3300012210	Vadose Zone Soil	MQTDSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEERNPRPRRRVGRDLHDEIDRLYREMMQEKEDG
Ga0137387_100716542	3300012349	Vadose Zone Soil	MQTDSGADPDSKELVANIKRLTRIVLDKLEEGSREGSLDPAQARLYGSIATRSLCLWLETRNPRPRRRAGRDLHDEIDRLYREMMQEKESGS*
Ga0137387_112719101	3300012349	Vadose Zone Soil	LVANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPTPRRRVGRDLHDEIDRLYHEMTQEKEGGS*
Ga0137386_108731621	3300012351	Vadose Zone Soil	MNMQTDSGADPDSEELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDE
Ga0137371_105943822	3300012356	Vadose Zone Soil	MNMQTDSGADPDSEELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLETKSPTPRRRVGKDLHDEIDRLYHEMTQEKEGGS*
Ga0137371_107984861	3300012356	Vadose Zone Soil	MQTDSGADPDSKELLANIKRLSRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEREDGS*
Ga0137360_111943551	3300012361	Vadose Zone Soil	MQADSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYREMTQEKEGGS*
Ga0137361_102291592	3300012362	Vadose Zone Soil	MQADSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0137390_102623652	3300012363	Vadose Zone Soil	MQADSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARRRVGRDLRDEIDRLYHEMMQEKEGGS*
Ga0137390_102651502	3300012363	Vadose Zone Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMVQEKEGGS*
Ga0137390_117636311	3300012363	Vadose Zone Soil	IKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0137396_111600191	3300012918	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYRETMEEKEAGS*
Ga0137416_119783451	3300012927	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGFKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS*
Ga0134075_100410062	3300014154	Grasslands Soil	MNMQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKGGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYSEMTQEKEGGS*
Ga0134069_12628372	3300017654	Grasslands Soil	LANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPTPRRRVGRDLHDDIDRLYREMMEEKEGGS
Ga0134083_102854441	3300017659	Grasslands Soil	MQTDSGADPDGKELLANIEILTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRSTAK
Ga0066669_100071352	3300018482	Grasslands Soil	MQTDSGADPDRIELLASIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS
Ga0215015_100929674	3300021046	Soil	MQSPDSGADVDRIELMANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPVPRRRVGRDLHDDIDRVYREMMQDKEGGS
Ga0215015_109962024	3300021046	Soil	MNMQTDSGADSDSEELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLPDDIDRLYREMMKEKELSLIHI
Ga0207646_100051929	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRALCLWLEARNPRPRRRFGRDLHDDIDRMFREMMQEKEGGS
Ga0209234_13134522	3300026295	Grasslands Soil	MQTDSGADPDRIELLASIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRLVGRDLHDEIDRLYHEMTQEK
Ga0209235_10330263	3300026296	Grasslands Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYSEMTQEKEGGS
Ga0209237_11341031	3300026297	Grasslands Soil	MQTDSGADTDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDLLYREMMQKKESGS
Ga0209152_100039152	3300026325	Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMTQEKEGGS
Ga0209802_10436443	3300026328	Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEDGS
Ga0209802_12099081	3300026328	Soil	MQTDSGADTDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYHEMTQ
Ga0209375_10375763	3300026329	Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS
Ga0209803_10303212	3300026332	Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYSEMTQEKEGGS
Ga0209377_10147001	3300026334	Soil	PVSRMNMQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRSTAK
Ga0209159_11436092	3300026343	Soil	MSLDSGAAGTEELLGNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS
Ga0257177_10240262	3300026480	Soil	MQTDSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQSRLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEAGS
Ga0257181_10127042	3300026499	Soil	MQADSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARRRVGRDLHDEIDRLYHEMMQEKEGGS
Ga0209056_100937894	3300026538	Soil	LDSGAAGTEELLRNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYHEMTQEKEGGS
Ga0209056_102823292	3300026538	Soil	MQTDSGADPDRIELLASIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEERNPRPRRRVGRDLHDEIDRLYREMMQEKEDGS
Ga0209161_100136155	3300026548	Soil	MSLDSGAAGTEELLRNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEAQSPTPRRRVGRDLHDEIDRLYHEMTQEKEGGS
Ga0209161_104068623	3300026548	Soil	LTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEERNPRPRRRVGRDLHDEIDRLYREMMQEKEDGS
Ga0209648_100107864	3300026551	Grasslands Soil	MQTDSGADTDSKELLTNIKRLTRIVLDKLEEGSKEGSLDSAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS
Ga0209076_10252863	3300027643	Vadose Zone Soil	MQTDSGADPDSKELLANIKRLTRIVLDKLEEGSKEGSLDSAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLHDEIDRLYREMMQEKEGGS
Ga0209076_11139332	3300027643	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEMDRLYREMMQEKEAGS
Ga0209588_100026414	3300027671	Vadose Zone Soil	MQIDSGADPDGKELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPKPRRRVGRDLHDEIDRLYHEMIQEKEAGS
Ga0209180_100493433	3300027846	Vadose Zone Soil	MQADSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARKRVGRDLHDEIDRLYHEMMQEKEGGS
Ga0209180_104391591	3300027846	Vadose Zone Soil	KELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEGGS
Ga0209180_106194012	3300027846	Vadose Zone Soil	MSIDSGAAGTEELLGNIKRVTRIILDRLEEGSKEGSLDQAQMRLYGSILTRSLCLWLEALNPRPRRQVGRDVHDEIDRLFREMKQEKESQL
Ga0209283_104362711	3300027875	Vadose Zone Soil	MQIDSGADTDRIELLANIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARSPRPRRRVGRDLHDEIDRLYREMMQEKEGGS
Ga0209283_109474732	3300027875	Vadose Zone Soil	DSGADPDSKELLTNIKRLTRIVLDKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRARRRVGRDLHDEIDRLYHEMMQEKEGGS
Ga0257175_10103312	3300028673	Soil	MQADSGADPDSKELLTNIKRLTRIVLDKLEEGSNEGSLDPAQARLYGSIATRSLCLWLEARNPRARRRVGRDLHDEIDRLYHEMMQEKEGGS
Ga0307471_1001984552	3300032180	Hardwood Forest Soil	MQSPDSGADHDRIELLANIRRLTRIVLNKLEEGSKEGSLDPAQARLYGSIATRSLCLWLEARNPRPRRRVGRDLRDDIDRMYREMVQEKEGGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084046

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences