Metagenome Family F084028

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084028
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	100 residues
Representative Sequence	GPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
Number of Associated Samples	102
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.94 %
% of genes near scaffold ends (potentially truncated)	91.07 %
% of genes from short scaffolds (< 2000 bps)	86.61 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (94.643 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.071 % of family members)
Environment Ontology (ENVO)	Unclassified (35.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (28.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.74% β-sheet: 33.88% Coil/Unstructured: 55.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01019	G_glu_transpept	93.75
PF00578	AhpC-TSA	0.89
PF13823	ADH_N_assoc	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	93.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	93.75 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	93.75 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	93.75 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	87.50 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	87.50 %
Unclassified	root	N/A	5.36 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02FU0Y9	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300001661\|JGI12053J15887_10499438	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300002907\|JGI25613J43889_10206075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300004009\|Ga0055437_10090162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	889	Open in IMG/M
3300004145\|Ga0055489_10148946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300005187\|Ga0066675_10629040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300005205\|Ga0068999_10134399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300005218\|Ga0068996_10059794	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	770	Open in IMG/M
3300005444\|Ga0070694_100798336	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	774	Open in IMG/M
3300005518\|Ga0070699_101234725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	686	Open in IMG/M
3300005549\|Ga0070704_100448082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1111	Open in IMG/M
3300005576\|Ga0066708_10215704	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1209	Open in IMG/M
3300005880\|Ga0075298_1033661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300006046\|Ga0066652_102082399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300006791\|Ga0066653_10444998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300006796\|Ga0066665_11688033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300006797\|Ga0066659_10325827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1182	Open in IMG/M
3300006914\|Ga0075436_101101440	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300007265\|Ga0099794_10760811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300009012\|Ga0066710_103544992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300009089\|Ga0099828_11751358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300009094\|Ga0111539_11930124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300009098\|Ga0105245_11940307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300009162\|Ga0075423_12285326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300009166\|Ga0105100_10760392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300009792\|Ga0126374_11021339	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300009801\|Ga0105056_1063588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300009809\|Ga0105089_1050692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300010043\|Ga0126380_11774098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300010047\|Ga0126382_10320504	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1173	Open in IMG/M
3300010326\|Ga0134065_10231839	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300010335\|Ga0134063_10368127	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300010366\|Ga0126379_12874372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300010399\|Ga0134127_10730016	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300011414\|Ga0137442_1026532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1057	Open in IMG/M
3300011424\|Ga0137439_1124269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300012040\|Ga0137461_1124097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	749	Open in IMG/M
3300012203\|Ga0137399_10826957	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300012209\|Ga0137379_11694948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300012211\|Ga0137377_10172117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2078	Open in IMG/M
3300012211\|Ga0137377_11220679	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	682	Open in IMG/M
3300012353\|Ga0137367_10613704	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	761	Open in IMG/M
3300012355\|Ga0137369_10757503	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300012361\|Ga0137360_11405673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300012362\|Ga0137361_10909929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	797	Open in IMG/M
3300012362\|Ga0137361_11479195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300012922\|Ga0137394_10005403	All Organisms → cellular organisms → Bacteria	9732	Open in IMG/M
3300012922\|Ga0137394_10625640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	909	Open in IMG/M
3300012944\|Ga0137410_10079026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2401	Open in IMG/M
3300012944\|Ga0137410_10195231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1565	Open in IMG/M
3300014154\|Ga0134075_10131085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1068	Open in IMG/M
3300014299\|Ga0075303_1093012	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300014318\|Ga0075351_1103244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300014321\|Ga0075353_1047597	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300014326\|Ga0157380_11394683	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	751	Open in IMG/M
3300014881\|Ga0180094_1081354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	727	Open in IMG/M
3300014885\|Ga0180063_1066690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1058	Open in IMG/M
3300015358\|Ga0134089_10572831	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300015371\|Ga0132258_10580718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2812	Open in IMG/M
3300015371\|Ga0132258_11342003	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1807	Open in IMG/M
3300017966\|Ga0187776_10091305	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1799	Open in IMG/M
3300018063\|Ga0184637_10082159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1977	Open in IMG/M
3300018075\|Ga0184632_10450875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300018084\|Ga0184629_10238020	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	949	Open in IMG/M
3300019878\|Ga0193715_1046332	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	936	Open in IMG/M
3300019880\|Ga0193712_1054775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	870	Open in IMG/M
3300020002\|Ga0193730_1113394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	748	Open in IMG/M
3300020004\|Ga0193755_1016057	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2464	Open in IMG/M
3300020060\|Ga0193717_1079813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1073	Open in IMG/M
3300021081\|Ga0210379_10158781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	964	Open in IMG/M
3300025165\|Ga0209108_10162136	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1173	Open in IMG/M
3300025327\|Ga0209751_11358295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300025569\|Ga0210073_1046250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	903	Open in IMG/M
3300025973\|Ga0210145_1024066	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300026001\|Ga0208000_111086	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300026015\|Ga0208286_1003335	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1012	Open in IMG/M
3300026298\|Ga0209236_1219759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	667	Open in IMG/M
3300026358\|Ga0257166_1053391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300026359\|Ga0257163_1012083	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1307	Open in IMG/M
3300026371\|Ga0257179_1024976	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300026496\|Ga0257157_1041362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	769	Open in IMG/M
3300026499\|Ga0257181_1007278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1383	Open in IMG/M
3300027383\|Ga0209213_1091899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300027650\|Ga0256866_1050016	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1106	Open in IMG/M
3300027821\|Ga0209811_10418578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300027882\|Ga0209590_10309650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1015	Open in IMG/M
3300027950\|Ga0209885_1021084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300027979\|Ga0209705_10465678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	621	Open in IMG/M
3300028673\|Ga0257175_1043945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300028884\|Ga0307308_10118727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1262	Open in IMG/M
3300028906\|Ga0308309_10087121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2379	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1028677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1158	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1116312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1137382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	606	Open in IMG/M
3300031455\|Ga0307505_10452687	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300031720\|Ga0307469_11761881	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300031720\|Ga0307469_12167718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300031820\|Ga0307473_10159484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1294	Open in IMG/M
3300031820\|Ga0307473_11129492	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	579	Open in IMG/M
3300031949\|Ga0214473_10198317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2324	Open in IMG/M
3300032180\|Ga0307471_103526659	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300032275\|Ga0315270_10603608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300033501\|Ga0326732_1007621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2028	Open in IMG/M
3300033502\|Ga0326731_1004233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3758	Open in IMG/M
3300033814\|Ga0364930_0186075	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300033814\|Ga0364930_0324160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.89%
Aquatic	Environmental → Aquatic	17.86%
Plants	Host-Associated → Plants	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.32%
Sediment	Environmental → Aquatic → Sediment	8.04%
Marine	Environmental → Aquatic → Marine	5.36%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.46%
Peat	Environmental → Terrestrial → Peat	1.79%
Floodplain	Environmental → Terrestrial → Floodplain	1.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Loam	Environmental → Terrestrial → Soil → Loam	6.25%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.36%
Sand	Environmental → Terrestrial → Soil → Sand	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.36%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.57%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.68%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005880	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_201	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025973	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026001	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes)	Environmental	Open in IMG/M
3300026015	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027950	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_11230810	2170459003	Grass Soil	VPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAQDXGVFLWTAQRGPAVRVCFLIHNDAGTWTCRLHPFEFAKETPA
JGI12053J15887_104994382	3300001661	Forest Soil	DINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
JGI25613J43889_102060751	3300002907	Grasslands Soil	TDEELPVLTVLDDWRDRPGPPALPYLDDINAFMPAAAPLYVTAEAHAAAQREPERFGTAWVCDXCGEAEDAGVFLWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETP*
Ga0055437_100901622	3300004009	Natural And Restored Wetlands	VLDGWRIAPARPLLPYLGDIGAFLLGERPLFVTPEAYAAAGQEPEQFGTAWVCEECGEAEDAAVFLWTAHAGPSVRVCLLIENDAGVWSCRLHPFEFLREAA*
Ga0055489_101489462	3300004145	Natural And Restored Wetlands	LDDWRGRPGAPVLPYLDDINAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0066675_106290402	3300005187	Soil	PVLPVLDAWRVIQARPLLPYLDDIGAFFPGNRPLFVTPEAIAAARQEPEQFGTAWVCDECGEAEDAAAFFWTVHAGPIVSVCFLIQNDAGVWSCRLHPFDFLKEAA*
Ga0068999_101343991	3300005205	Natural And Restored Wetlands	YLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAAVFLWTAHRGSRVRVCFLVHNDAGVWTCRLHPFEFAKETA*
Ga0068996_100597941	3300005218	Natural And Restored Wetlands	PYLDDIGAFLPGERLLFVTPEAYAAARQEPEQFGTAWVCEECGEAEDAGTFLWTAHAGPSVRVCFLIQNDAGVWSCRFHPFEFLKEAA*
Ga0070694_1007983362	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DVPVLPYLDDINAFMPSAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAQDAGVFFWTAQRGPAVRVCFLIHNDAGTWTCRLHPFEFAKETPA*
Ga0070699_1012347251	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SLDRLAARAETPVLPVLDAWRAMPDRPLLPYLDDIEAFLPGERPLFVTPEACAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPAVRVCFLIQNDAGVWSCRLHPFDFLKEAA*
Ga0070704_1004480821	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AAAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAQDAGVFLWTAQRGPAVRVCFLIHNDAGTWTCRLHPFEFAKETPA*
Ga0066708_102157041	3300005576	Soil	LSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRFHPFEFNREAA*
Ga0075298_10336611	3300005880	Rice Paddy Soil	AVAEEAPVLPVLDAWRETPAVPVLPYLDDINAFMPSAPLYVTAEAHAAAQREPEQFGTAWACDECGDAGDAGVFFWTEQRREAVRVCFLIHNDAGIWTCRLHPFEFAKETPA*
Ga0066652_1020823991	3300006046	Soil	LPARPLLPYLDDIGAFLPGARPLFVTPEAYATARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0066653_104449982	3300006791	Soil	RVLPARPLLPYLDDIGAFLPGARPLFVTPEAYATARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFDFLKEAA*
Ga0066665_116880332	3300006796	Soil	SESLDRVAVRAETAVLPVLDAWRVLPARPLLPYLDDIGAFLPGARPLFVTPEAYATARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0066659_103258272	3300006797	Soil	LTVIDGWRALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRFHPFEFNREAA*
Ga0075436_1011014401	3300006914	Populus Rhizosphere	PLLPLLDGWRDEAGPPVLPYLDDINAFMPAAAPLYVTADAHEAAQREVEQFTTAWACDECGLAEDAGVFFWTAHRGSAVRVCFLIHNDAGIWTCRLHPFEFAKEAA*
Ga0099794_107608112	3300007265	Vadose Zone Soil	RALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCYECGEAEDASVFLWTVRGEGAVRVCFLIQNDAGIWTCRLHPFEFNREAA*
Ga0066710_1035449921	3300009012	Grasslands Soil	VWPALDAWRILPARPLLPYLGDIGAFLPGARPLFVTPEAYATARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFLKEAA
Ga0099828_117513583	3300009089	Vadose Zone Soil	PYLEDIGAFLPGERPLFVTPEAYAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGSSVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0111539_119301241	3300009094	Populus Rhizosphere	DDWREAAAPSVPYLDDINAFMPASSPIYVTADAHAAAQRAPEQFATAWVCDECGEAEDAGTFFWTAHRRDAVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0105245_119403072	3300009098	Miscanthus Rhizosphere	NAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFLWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETP*
Ga0075423_122853261	3300009162	Populus Rhizosphere	SPVLTVIDGWRALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDAGVFLWTVRGEGTVRVCFLIQNDAGIWTCRLHPFEFNREAA*
Ga0105100_107603922	3300009166	Freshwater Sediment	AVLDDWRERPGPPALPYLDDINAFMPVAAPLYVTAEAHAAAQREPEQFSTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0126374_110213391	3300009792	Tropical Forest Soil	LGPMLDRLMVGEETPALPLIDGWRAHPAPPLLPYHEDIGAFLPDSRPLFVTAEAHAAARETPERFALAWVCDECGQAEDAAAYLWTSQEADAVRVCLLLQNDAGVWSVRLHPFRFPKEAV
Ga0105056_10635881	3300009801	Groundwater Sand	LPVLAVLDDWRERPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQQEPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0105089_10506922	3300009809	Groundwater Sand	GPPVLPYLDDINAFMPAAAPLYVTADAHEAAKREVEQFTAAWVCDECGEAEDAGVFFWTAHRASAVRVCFLIHNDAGIWTCGLHPFEFAKEAA*
Ga0126380_117740982	3300010043	Tropical Forest Soil	PYLDDINAFMPASAPLYVTADAHAAALREPEQFATAWVCDECGEAEDAGTFFWTAHRRDAVRVCFLIHNDAGVWTCRLHPFEFAKEIA*
Ga0126382_103205042	3300010047	Tropical Forest Soil	PVLPLLDDWREAAAPTVPYLDDINAFMPASSPIYVTADAHAAAQRASEQFATAWVCDECGEAEDAGTFFWTAHRRDAVRVCFLIHNDAGVWTCRLHPFEFAKEIA*
Ga0134065_102318391	3300010326	Grasslands Soil	PSLEWVTAPLSSPALTVIDGWRALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTMRGEGTVRVCFLIQNDAGIWTCRFHPFEFNREAA*
Ga0134063_103681271	3300010335	Grasslands Soil	SPVLTVIDGWRALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAAAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRFHPFEFNREAA*
Ga0126379_128743722	3300010366	Tropical Forest Soil	PVLPLVEGWREEAAAPVLPYLSDINAFMPASMPLYVTEDAHATALREPEQFATAWVCDECGEASDAAVFLWTAHRGSVVRVCFLIHNDAGVWTCRLHPFEFAKEAA*
Ga0134127_107300162	3300010399	Terrestrial Soil	GPPALPYLDDINAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFLWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETP*
Ga0137442_10265322	3300011414	Soil	GAAARPLLPYLDDIGAFLPGERPLFVTPEAYAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPSVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0137439_11242691	3300011424	Soil	AEEAPVLDVLDDWRERSGPPALPYLDDINAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPVVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0137461_11240971	3300012040	Soil	RPLLPYLDDIGAFLPGERPLFVTPEAYAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPSVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0137399_108269572	3300012203	Vadose Zone Soil	RPVLSYLADIGAFLPGDRPLFVTPEAHAATQETAEQFATAWVCDECGEAEDAGVFLWTVRGAGTVRVCFLIQNDAGIWTCRLHPFEFNREAA*
Ga0137379_116949481	3300012209	Vadose Zone Soil	YLDDIGAFLPGERFLFVTPEACEAARQDPEQFGTAWVCDECGEAEDAAAFLWTAHAGPAVRVCFLIQNDAGVWSCRLHPFDFSKEAA*
Ga0137378_113291111	3300012210	Vadose Zone Soil	SLDRIAVEGETPVLDLLDAWRAEAAPPLLPYLDDISAFLPGERPLFVTPEAYAAACETPERFALAWVCDECGLAEDAAAFLWTAHTGETVRVCFLIQNDGGVWSCRLHPFAFSKEAA*
Ga0137377_101721172	3300012211	Vadose Zone Soil	VRAETAVLPVLDAWRVLPARPLLPYLDDIGAFLPGARPLFVTPEAYATARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0137377_112206792	3300012211	Vadose Zone Soil	EMSESLDRVTARAETPVLPVLDAWRVIQARPLLPYLDDVGAFLPGNRPLFVTPEAIAAARQEPEQFGTAWVCDECGEAEDAAAFFWTVHAGPIVCVCFLIQNDAGVWSCRLHPFDFLKEAA*
Ga0137367_106137041	3300012353	Vadose Zone Soil	DAWRAMPDRPLLPYLDDIEAFLPGERPLFVTPEACAAARQEQEQFGTAWVCDECGESEDAAAFLWTAHAGPAVRVCFLIQNDAGVWSCRLHPFDFPKEAA*
Ga0137369_107575032	3300012355	Vadose Zone Soil	PYLDDINAFMPAAAPLYVTAEAHAVAQREPEQFGTAWVCDECGEAEDAGIFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0137375_100094271	3300012360	Vadose Zone Soil	GEMSESLDRVAAQAETPVLPVIDAWRVMPARPLLPYLDDIGAFLPGERPLFVTPEAYAAARQEPERFGTAWVCDECGLAEDAAAFLWTAHAGPLVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0137360_114056732	3300012361	Vadose Zone Soil	IDGWRALGERPVLSYLSDICAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRLHPFEFNREAA*
Ga0137361_109099291	3300012362	Vadose Zone Soil	EWVIAPLSSPALTVIDGWRALGERPVLSYLSDIGAFLPDDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRLHPFEFNREAA*
Ga0137361_114791952	3300012362	Vadose Zone Soil	RPLLPYLDDIGAFLPGNRPLFVTPEAIAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPAVRVCFLIQNDAGVWSCRLHPFDFLKEAA*
Ga0137394_100054031	3300012922	Vadose Zone Soil	RERPGPPALPYLDDINAFMPVSGPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0137394_106256402	3300012922	Vadose Zone Soil	PVLDAWRVIQARPLLPYLDDIGAFLPGNRPLFVTPEAIAAARQEPEQFGTAWVCDECGEAEDAAAFFWTVHAGPIVCVCFLIQNDAGVWSCRLHPFDFLKEPA*
Ga0153915_122894631	3300012931	Freshwater Wetlands	MARDEMSESLDRVPARGETPVLPLVDAWRASPDRPRLPYLDEIGAFLPGERPLSVTPEAYAVARQEPEQFGTASVCGECGEAEDAGAFLWTTHAGPSVRVCVLIQDDTGVWSCRLHP
Ga0137410_100790263	3300012944	Vadose Zone Soil	ALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAAAQETAEQFATAWVCDECGEAEDAGVFLWTVRGEGTVRVCFLIHNDAGIWTCRLHPFEFNREAA*
Ga0137410_101952312	3300012944	Vadose Zone Soil	GPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0134075_101310852	3300014154	Grasslands Soil	WRALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRFHPFEFNREAA*
Ga0075303_10930121	3300014299	Natural And Restored Wetlands	PYLGDIGAFLLGERPLFVTPEAYAAAGQEPEQFGTAWVCEECGEAEDAAVFLWTAHAGPSVRVCLLIENDAGVWSCRLHPFEFLREAA*
Ga0075351_11032441	3300014318	Natural And Restored Wetlands	EEAPGLAVLDAWRERPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAAVFLWTAHRGSRVRVCFLVHNDAGVWTCRLHPFEFAKETA*
Ga0075353_10475972	3300014321	Natural And Restored Wetlands	LPVLDAWRVTVARPLLAYLDDIGAFLPGERPLFVTPEAYAAARQVPEQFGTAWVCDECGEAEDAAAFLWTAHAGASVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0075352_11993292	3300014324	Natural And Restored Wetlands	RGEMSPLLDRVTTGEETPALPVLDAWRATIARPLQPYLDDIGAFLPGERPLFVTPEAYAAARREPERFGTAWVCEECGEAEDAGTFLWTAHAGPSVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0157380_113946831	3300014326	Switchgrass Rhizosphere	LDDINAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFLWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETP*
Ga0180094_10813542	3300014881	Soil	ETPVLTVLNAWRGAVARPLLPYLDDIGAFLPGERPLFVTPEAYAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPSVRVCFLIQNDAGVWSCRLHPFEFLKEAA*
Ga0180063_10666901	3300014885	Soil	PALPYLDDINAFMPAAAPLYVTAEAHAAAQREAEQFSTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA*
Ga0180063_11151072	3300014885	Soil	LLARGEMSPSLDRIAARVETPVLPVVDAWRGAVARPLLPYLDDIGAFLPGERPLFVTPEAYAAARQEPEQFGTAWVCNECGEAEDAAAFLWTAHAGPSVRVCFLIQNDAGVRSCRLHPFEFLKEAA*
Ga0134089_105728311	3300015358	Grasslands Soil	PALTVIDGWRALGERPVLSYLSDIGAFLSGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRFHPFEFNREAA*
Ga0132258_105807185	3300015371	Arabidopsis Rhizosphere	DEAPVLPVLDAWREAPGVPVLPYLDDINAFMPAGPLYVTAEAHAVARREPEQFATAWVCDECGEASDAGVFFWTAQRGPAVRVCFLIHNDAGIWTCRLHPFEFAKETPA*
Ga0132258_113420031	3300015371	Arabidopsis Rhizosphere	VLPVLDAWRAMPDRPLLPYLDDIGAFLPGERPLFVTPEACAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPAVRVCFLIQNDAGVWSCRLHPFDFLKEAA*
Ga0187776_100913052	3300017966	Tropical Peatland	LDDWREEAVPSLPYLADINAFMPASAPLYVTAEAHAAARREPEQFATAWVCDECGEAEDAGIFLWTAHRRQAVRVCFLIHNDAGIWTCRLHPFEFSKETA
Ga0184637_100821592	3300018063	Groundwater Sediment	PVLAVLDDWRERPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQREPEQFSTAWVCDECGEAEDAGVFFWTAHRGSVVRVCFLIHNDVGVWTCRLHPFEFAKETA
Ga0184632_104508752	3300018075	Groundwater Sediment	AYLSDIGAFMPGDRPLFVTPEAHAAAQEVAEQFGTAWVCDECGEAEDAGVFLWTARGEDAVRVCFLIHNDAGIWSCRLHPFEFNREAA
Ga0184629_102380202	3300018084	Groundwater Sediment	VLPVLDAWRGTVARPLLPYLDDIGAFLPGERPLFVTPEAYAAARQEPEQFGTAWVCDECGEAEDAGAFLWTAHEGPSVRVCFLIQNDAGVWSCRLHPFEFLKEAA
Ga0193715_10463323	3300019878	Soil	MPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0193712_10547752	3300019880	Soil	PGPPALPYLDDINAFMPAAGPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0193730_11133941	3300020002	Soil	EVPVLAVLDDWRERPGPPALPYLDDINAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0193755_10160571	3300020004	Soil	PGPLALPYLDDINAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFLWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETP
Ga0193717_10798132	3300020060	Soil	RERAGPPALPYLDDINAFMPAAAPLYVTAEAHAAAQREAEQFGTAWVCDECGEAEDAGVFLWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETP
Ga0210379_101587812	3300021081	Groundwater Sediment	RVAADVETPVLPVVDAWRGAVARPLLPYLDDIGAFLPGERPLFVTPDAYAVARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFPKEAA
Ga0209108_101621362	3300025165	Soil	TPVLPVVDAWRGAVARPLLPYLDDIGAFLTGERPLFVTPEAYAAARQEPEQFGTAWVCDECGEAEDAGAFLWTAHAGPSVRVCFLIQNDAGVWSCRLHPFDFLKEAA
Ga0209751_113582951	3300025327	Soil	DWRALPARPLLPYFADIGAFMPGETPLYVNPDAYAAALEAPEAFATAWACEECGEAEDAGVFLWTARGAGRVRVCFLIENDAGVWSCRLHPFEFATEAA
Ga0210073_10462501	3300025569	Natural And Restored Wetlands	VLDGWRIAPARPLLPYLGDIGAFLLGERPLFVTPEAYAAAGQEPEQFGTAWVCEECGEAEDAAVFLWTAHAGPSVRVCLLIENDAGVWSCRLHPFEFLREAA
Ga0210145_10240662	3300025973	Natural And Restored Wetlands	PALTYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAAVFLWTAHRGSRVRVCFLVHNDAGVWTCRLHPFEFAKETA
Ga0208000_1110861	3300026001	Rice Paddy Soil	FMPSAPLYVTAEAHAAAQREPEQFSTAWACDECGDAGDAGVFFWTEQRREAVRVCFLIHNDAGIWTCRLHPFEFAKETPA
Ga0208286_10033351	3300026015	Rice Paddy Soil	MPSAPLYVTAEAHAAAQREPEQFSTAWACDECGDAGDAGVFFWTEQRREAVRVCFLIHNDAGIWTCRLHPFEFAKETPA
Ga0209236_12197592	3300026298	Grasslands Soil	ERPVLSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDASVFLWTVRGEGTVRVCFLIQNDAGIWTCRLHPFEFNREAA
Ga0257166_10533911	3300026358	Soil	PALPYLDDIGAFMPASAPLYVTAEAHAAAQSEPEQFSTAWVCDECGEAEDAAVFFWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0257163_10120832	3300026359	Soil	DVPVLPYLDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAQDAGVFFWTAQRGPAVRVCFLIHNDAGTWTCRLHPFEFAKETPA
Ga0257179_10249762	3300026371	Soil	DDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAEDAGVFFWTAQRGPAVRVCFLIHNDAGTWTCRLHPFEFAKETPA
Ga0257157_10413622	3300026496	Soil	FMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAQDAGVFLWTAQRGPAVRVCFLIHNDAGTWTCRLHPFEFAKETPA
Ga0257181_10072782	3300026499	Soil	VLAVLDDWRERPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQSEPEQFSTAWVCDECGEAEDAAVFFWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0209213_10918992	3300027383	Forest Soil	DINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAAAFFWTVHAGPIVCVCFLIQNDAGVWSCRLHPFGFLKDAA
Ga0256866_10500162	3300027650	Soil	RPGPPALPYLDDINAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGLAEDAAVFLWTAHRGPAVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0209811_104185782	3300027821	Surface Soil	DDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAQDAGVFLWTAQRGPAVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0209590_103096502	3300027882	Vadose Zone Soil	VIDGWRGLGERPVLSYLSDIGAFMPGDRPLFVTPEAHAAAQEAAEQFGTAWVCDECGEAEDAGVFLWTARNEDAVRVCFLIHNDAGIWSCRLHPFEFNREAA
Ga0209885_10210842	3300027950	Groundwater Sand	SEAPVLPLLDGWREEAGPPVLPYLDDINAFMPAGAPLYVTADAHEAAKREVEQFTAAWVCDECGEAEDAGVFFWTAHRASAVRVCFLIHNDAGIWTCGLHPFEFAKEAA
Ga0209705_104656781	3300027979	Freshwater Sediment	LAVLDDWRERPGPPALPYLDDINAFMPVAAPLYVTAEAHAAAQREPEQFSTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0257175_10439451	3300028673	Soil	LDDINAFMPAAPLYVTAEAHAAAQREPEQFSTAWVCDECGDAQDAGVFLWTAQRGPAVRVCFLIHNDAGTWTCRLHPFEFAKETPA
Ga0307308_101187271	3300028884	Soil	AVLDDWRERPGPPALPYLDDIGAFMPASAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
Ga0308309_100871211	3300028906	Soil	LAAAEETPVLPLLDEWHAAPDRPLLPYLDDINAFLPGAAPLYVTAEAHAAARREPQQFTTAWVCDECGEAEDAGVFFWTAHRDRTVRVCFLIHNDAGTWTCRLHPFEFAKETA
(restricted) Ga0255311_10286771	3300031150	Sandy Soil	FMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
(restricted) Ga0255312_11163122	3300031248	Sandy Soil	PALSYLDDIGAFMPASAPLYVTAEAHAAAQREPEQFSTAWVCDECGEAEDAGVFFWTAHRGPLVRVCFLIHNDAGVWTCRLHPFEFAKETA
(restricted) Ga0255312_11373822	3300031248	Sandy Soil	PVLPVLDAWRETADVPALPYLDDINAFMPAGPLYVTAEAHAVARREPEQFATAWVCDECGEASDAGVFFWTAQRGPAVRVCFLIHNDAGIWTCRLHPFEFAKETPA
Ga0307505_104526871	3300031455	Soil	GPPALPYLDDINAFMPAAAPLYVTAEAHAAAQREPEQFGTAWVCDECGEAEDAGVFLWTAHRGPRVRVCFLIHNDAGVWTCRLHPFEFAKETP
Ga0307469_117618811	3300031720	Hardwood Forest Soil	ALPYLDDINAFLPAAAPLYVTAEAHAAAQREAEQFGTAWVCDECGEAEDAGIFFWTAHRGPLVRVCLLIHNDAGVWTCRLHPFEFAKETA
Ga0307469_121677181	3300031720	Hardwood Forest Soil	VETPVLPVLDAWRVIGPRPLLPDLGDIGAFLPGERPLFITPEAYAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFLKEAT
Ga0307468_1024703291	3300031740	Hardwood Forest Soil	LDRIAVEAETPVLDLLDAWRTTGGPARLAYLDDISAFLPGDRPLFVTPEAYEAACEASERFGLVWVCDECGLAEDAAAFLWTARAGNTVRVCFLIQNDGGVWTCRFHPFEFSKEAA
Ga0307473_101594841	3300031820	Hardwood Forest Soil	LDAWRAMPDRPLLPYLDDIEAFLPGERPLFVTPEACAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPAVRVCFLIQNDAGVWSCRLHPFDFLKEAA
Ga0307473_111294922	3300031820	Hardwood Forest Soil	PLLPYLDDIGAFLPGARPLFVTPEAYATARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFLKEAA
Ga0214473_101983171	3300031949	Soil	AGVETPVLPVVDAWRGAVARPLLPYLDDIGAFLPGGRPLFVTPEAYAAARQVSEQFGTAWVCDECGEAEDAGAFLWTAHAGPSVRVCFLIQNDAGVWSCRLHPFEFLKEAA
Ga0307471_1035266591	3300032180	Hardwood Forest Soil	SPVLPVIDGWRALGERPVLSYLSDIGAFLPGDRPLFVTPEAHAVAQETAEQFATAWVCDECGEAEDAGVFLWTVRGKGTVRVCFLIQNDAGIWTCRLHPFEFNREAA
Ga0315270_106036081	3300032275	Sediment	EVETPVLPVLDAWRGAVARPLLPYLDDIGAFLPGERPLFVTPEAYAVARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPIVRVCFLIQNDAGVWSCRLHPFEFLKEAA
Ga0326732_10076211	3300033501	Peat Soil	MQYLAVADEAPVLPVLDAWREAPDVPALPYLDDINAFMPAGPLYVTAEAHAVARREPEQFTTAWVCDECGEASDAGVFFWTAQRGPAVRVCFLIHNDAGVWTCRLHPFEFAKETPA
Ga0326731_10042335	3300033502	Peat Soil	DEAPVLPVLDAWREAPDVPALPYLDDINAFMPAGPLYVTAEAHAVARREHEQFTTAWVCDECGDAGDAGVFFWTAQRGPAVRVCFLIHNDAGIWTCRLHPFEFAKETPA
Ga0364930_0186075_1_306	3300033814	Sediment	LDGWREEAGAPVLPYLDDINAFMPAAGPLYVTADAHEAARREPEQFTTAWVCDECGDAEDAGVFFWTAHRGSAVRVCFLIHNDAGIWTCRLHPFEFAKEAA
Ga0364930_0324160_3_359	3300033814	Sediment	PALDLVTAGVETPVLPVLDAWRGAAARPLLPYLDDIGAFLPGERPLFVTPEAYAAARQEPEQFGTAWVCDECGEAEDAAAFLWTAHAGPSVRVCFLIQNDAGVWSCRLHPFEFLKEAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters