Basic Information | |
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Family ID | F083955 |
Family Type | Metagenome |
Number of Sequences | 112 |
Average Sequence Length | 55 residues |
Representative Sequence | VLRVVSFAQGETDEGLDVALPIVVEGELVVIRHPARGQFPAVVELQVREARRVR |
Number of Associated Samples | 38 |
Number of Associated Scaffolds | 111 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 31.43 % |
% of genes near scaffold ends (potentially truncated) | 41.07 % |
% of genes from short scaffolds (< 2000 bps) | 88.39 % |
Associated GOLD sequencing projects | 37 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.45 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (64.286 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (41.071 % of family members) |
Environment Ontology (ENVO) | Unclassified (72.321 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (81.250 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 29.27% Coil/Unstructured: 70.73% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.45 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 111 Family Scaffolds |
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PF00400 | WD40 | 4.50 |
PF00069 | Pkinase | 2.70 |
PF00578 | AhpC-TSA | 1.80 |
PF03692 | CxxCxxCC | 1.80 |
PF08241 | Methyltransf_11 | 1.80 |
PF13243 | SQHop_cyclase_C | 0.90 |
PF04545 | Sigma70_r4 | 0.90 |
PF13414 | TPR_11 | 0.90 |
PF12700 | HlyD_2 | 0.90 |
PF01594 | AI-2E_transport | 0.90 |
PF01381 | HTH_3 | 0.90 |
PF13560 | HTH_31 | 0.90 |
PF00498 | FHA | 0.90 |
PF05148 | Methyltransf_8 | 0.90 |
PF07676 | PD40 | 0.90 |
PF07719 | TPR_2 | 0.90 |
PF01485 | IBR | 0.90 |
PF07119 | DUF1375 | 0.90 |
PF12706 | Lactamase_B_2 | 0.90 |
PF01874 | CitG | 0.90 |
PF00486 | Trans_reg_C | 0.90 |
PF03781 | FGE-sulfatase | 0.90 |
PF03050 | DDE_Tnp_IS66 | 0.90 |
PF13646 | HEAT_2 | 0.90 |
PF12695 | Abhydrolase_5 | 0.90 |
PF11104 | PilM_2 | 0.90 |
PF00140 | Sigma70_r1_2 | 0.90 |
PF00873 | ACR_tran | 0.90 |
PF13091 | PLDc_2 | 0.90 |
PF02627 | CMD | 0.90 |
PF01541 | GIY-YIG | 0.90 |
COG ID | Name | Functional Category | % Frequency in 111 Family Scaffolds |
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COG0515 | Serine/threonine protein kinase | Signal transduction mechanisms [T] | 10.81 |
COG0568 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | Transcription [K] | 0.90 |
COG0599 | Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family | General function prediction only [R] | 0.90 |
COG0628 | Predicted PurR-regulated permease PerM | General function prediction only [R] | 0.90 |
COG1262 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain | Posttranslational modification, protein turnover, chaperones [O] | 0.90 |
COG1767 | Triphosphoribosyl-dephospho-CoA synthetase | Coenzyme transport and metabolism [H] | 0.90 |
COG2128 | Alkylhydroperoxidase family enzyme, contains CxxC motif | Inorganic ion transport and metabolism [P] | 0.90 |
COG2226 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG | Coenzyme transport and metabolism [H] | 0.90 |
COG3436 | Transposase | Mobilome: prophages, transposons [X] | 0.90 |
COG5645 | Uncharacterized conserved protein YceK | Function unknown [S] | 0.90 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 64.29 % |
All Organisms | root | All Organisms | 35.71 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2166559005|cont_contig48048 | All Organisms → cellular organisms → Bacteria | 890 | Open in IMG/M |
2170459006|GBPF9FW02JWHY9 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium | 539 | Open in IMG/M |
2170459007|GJ61VE201DZDVZ | Not Available | 546 | Open in IMG/M |
2170459008|GA8OVOZ01ELOIA | Not Available | 515 | Open in IMG/M |
2170459008|GA8OVOZ02IGNZL | Not Available | 529 | Open in IMG/M |
2170459009|GA8DASG01A1LW3 | Not Available | 537 | Open in IMG/M |
2170459009|GA8DASG02HFM4B | Not Available | 513 | Open in IMG/M |
2170459009|GA8DASG02HQBMG | Not Available | 522 | Open in IMG/M |
3300005332|Ga0066388_101166716 | Not Available | 1312 | Open in IMG/M |
3300005332|Ga0066388_101322405 | Not Available | 1245 | Open in IMG/M |
3300005332|Ga0066388_102088190 | Not Available | 1019 | Open in IMG/M |
3300005332|Ga0066388_106019417 | Not Available | 613 | Open in IMG/M |
3300005575|Ga0066702_10926397 | Not Available | 520 | Open in IMG/M |
3300005713|Ga0066905_100021752 | All Organisms → cellular organisms → Bacteria | 3432 | Open in IMG/M |
3300005713|Ga0066905_100107819 | Not Available | 1909 | Open in IMG/M |
3300005713|Ga0066905_100176518 | All Organisms → cellular organisms → Bacteria | 1571 | Open in IMG/M |
3300005713|Ga0066905_100187771 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium | 1532 | Open in IMG/M |
3300005713|Ga0066905_100188915 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia | 1528 | Open in IMG/M |
3300005713|Ga0066905_100206409 | All Organisms → cellular organisms → Bacteria | 1474 | Open in IMG/M |
3300005713|Ga0066905_100212486 | All Organisms → cellular organisms → Bacteria | 1456 | Open in IMG/M |
3300005713|Ga0066905_100232612 | Not Available | 1403 | Open in IMG/M |
3300005713|Ga0066905_100401073 | Not Available | 1112 | Open in IMG/M |
3300005713|Ga0066905_100554242 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae | 965 | Open in IMG/M |
3300005713|Ga0066905_100879374 | Not Available | 783 | Open in IMG/M |
3300005713|Ga0066905_100926890 | Not Available | 764 | Open in IMG/M |
3300005713|Ga0066905_100981344 | Not Available | 744 | Open in IMG/M |
3300005713|Ga0066905_101767402 | Not Available | 570 | Open in IMG/M |
3300005713|Ga0066905_101801644 | Not Available | 564 | Open in IMG/M |
3300005764|Ga0066903_100032235 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia | 5963 | Open in IMG/M |
3300005764|Ga0066903_100076689 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales | 4327 | Open in IMG/M |
3300005764|Ga0066903_100150556 | All Organisms → cellular organisms → Bacteria | 3341 | Open in IMG/M |
3300005764|Ga0066903_100476380 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae | 2101 | Open in IMG/M |
3300005764|Ga0066903_101012421 | Not Available | 1520 | Open in IMG/M |
3300005764|Ga0066903_101560966 | All Organisms → cellular organisms → Bacteria | 1250 | Open in IMG/M |
3300005764|Ga0066903_101841918 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Sordariomycetidae → Sordariales → Sordariaceae | 1157 | Open in IMG/M |
3300005764|Ga0066903_101960716 | All Organisms → cellular organisms → Bacteria | 1123 | Open in IMG/M |
3300005764|Ga0066903_102179948 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia | 1068 | Open in IMG/M |
3300005764|Ga0066903_102885459 | All Organisms → cellular organisms → Bacteria | 932 | Open in IMG/M |
3300005764|Ga0066903_103023832 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium | 911 | Open in IMG/M |
3300005764|Ga0066903_103710816 | Not Available | 821 | Open in IMG/M |
3300005764|Ga0066903_104783628 | Not Available | 720 | Open in IMG/M |
3300005764|Ga0066903_108149790 | All Organisms → cellular organisms → Bacteria | 536 | Open in IMG/M |
3300006797|Ga0066659_11825784 | Not Available | 515 | Open in IMG/M |
3300009147|Ga0114129_11174432 | Not Available | 957 | Open in IMG/M |
3300009147|Ga0114129_12331012 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-F19 | 642 | Open in IMG/M |
3300009156|Ga0111538_13892643 | Not Available | 516 | Open in IMG/M |
3300009177|Ga0105248_12681218 | Not Available | 568 | Open in IMG/M |
3300009792|Ga0126374_10046649 | Not Available | 2167 | Open in IMG/M |
3300009792|Ga0126374_11145382 | Not Available | 619 | Open in IMG/M |
3300009792|Ga0126374_11209370 | Not Available | 605 | Open in IMG/M |
3300009792|Ga0126374_11217835 | Not Available | 604 | Open in IMG/M |
3300009792|Ga0126374_11321533 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 583 | Open in IMG/M |
3300009792|Ga0126374_11358640 | Not Available | 577 | Open in IMG/M |
3300010043|Ga0126380_11112224 | Not Available | 674 | Open in IMG/M |
3300010043|Ga0126380_12030507 | Not Available | 527 | Open in IMG/M |
3300010046|Ga0126384_10697211 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes | 899 | Open in IMG/M |
3300010046|Ga0126384_11145974 | Not Available | 715 | Open in IMG/M |
3300010046|Ga0126384_11472319 | Not Available | 637 | Open in IMG/M |
3300010047|Ga0126382_10098356 | Not Available | 1882 | Open in IMG/M |
3300010047|Ga0126382_10803290 | All Organisms → cellular organisms → Bacteria | 802 | Open in IMG/M |
3300010047|Ga0126382_11189089 | Not Available | 682 | Open in IMG/M |
3300010358|Ga0126370_10352777 | Not Available | 1189 | Open in IMG/M |
3300010358|Ga0126370_10716155 | Not Available | 881 | Open in IMG/M |
3300010359|Ga0126376_11444836 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium | 714 | Open in IMG/M |
3300010359|Ga0126376_12854848 | Not Available | 533 | Open in IMG/M |
3300010360|Ga0126372_10129781 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae | 1968 | Open in IMG/M |
3300010360|Ga0126372_10449204 | Not Available | 1194 | Open in IMG/M |
3300010360|Ga0126372_10465711 | All Organisms → cellular organisms → Bacteria | 1176 | Open in IMG/M |
3300010360|Ga0126372_10664848 | Not Available | 1011 | Open in IMG/M |
3300010360|Ga0126372_10997971 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium | 848 | Open in IMG/M |
3300010360|Ga0126372_12008005 | Not Available | 625 | Open in IMG/M |
3300010360|Ga0126372_12194047 | All Organisms → cellular organisms → Bacteria | 601 | Open in IMG/M |
3300010361|Ga0126378_12737096 | Not Available | 563 | Open in IMG/M |
3300010362|Ga0126377_11742899 | All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium | 698 | Open in IMG/M |
3300010362|Ga0126377_12440738 | Not Available | 599 | Open in IMG/M |
3300010362|Ga0126377_13305799 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes | 521 | Open in IMG/M |
3300010366|Ga0126379_10849687 | All Organisms → cellular organisms → Bacteria | 1014 | Open in IMG/M |
3300010366|Ga0126379_12699831 | Not Available | 593 | Open in IMG/M |
3300010366|Ga0126379_13706314 | Not Available | 512 | Open in IMG/M |
3300010398|Ga0126383_10230434 | Not Available | 1802 | Open in IMG/M |
3300010398|Ga0126383_11826042 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium | 696 | Open in IMG/M |
3300010398|Ga0126383_12217045 | Not Available | 636 | Open in IMG/M |
3300010398|Ga0126383_12255460 | Not Available | 630 | Open in IMG/M |
3300010398|Ga0126383_13294239 | Not Available | 528 | Open in IMG/M |
3300010398|Ga0126383_13294239 | Not Available | 528 | Open in IMG/M |
3300010398|Ga0126383_13590261 | Not Available | 507 | Open in IMG/M |
3300012201|Ga0137365_10864208 | Not Available | 660 | Open in IMG/M |
3300012204|Ga0137374_10162709 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium | 1974 | Open in IMG/M |
3300012204|Ga0137374_10183821 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes | 1821 | Open in IMG/M |
3300012204|Ga0137374_10248696 | Not Available | 1492 | Open in IMG/M |
3300012204|Ga0137374_10278923 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus → Limnoglobus roseus | 1383 | Open in IMG/M |
3300012204|Ga0137374_10444254 | Not Available | 1020 | Open in IMG/M |
3300012204|Ga0137374_10624432 | Not Available | 819 | Open in IMG/M |
3300012350|Ga0137372_10451082 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Trichocoleusaceae → Trichocoleus → unclassified Trichocoleus → Trichocoleus sp. FACHB-262 | 964 | Open in IMG/M |
3300012353|Ga0137367_11039632 | Not Available | 557 | Open in IMG/M |
3300012355|Ga0137369_10559549 | Not Available | 800 | Open in IMG/M |
3300012358|Ga0137368_10328230 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber | 1025 | Open in IMG/M |
3300012469|Ga0150984_109918352 | Not Available | 546 | Open in IMG/M |
3300012469|Ga0150984_116472578 | Not Available | 550 | Open in IMG/M |
3300012532|Ga0137373_10848790 | Not Available | 673 | Open in IMG/M |
3300012925|Ga0137419_11347109 | Not Available | 601 | Open in IMG/M |
3300012948|Ga0126375_11101671 | Not Available | 654 | Open in IMG/M |
3300012971|Ga0126369_11346271 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 804 | Open in IMG/M |
3300031545|Ga0318541_10816460 | Not Available | 520 | Open in IMG/M |
3300032261|Ga0306920_100606069 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Novipirellula → Novipirellula aureliae | 1620 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 41.07% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 31.25% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 11.61% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 6.25% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.68% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.79% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.79% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
Simulated | Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated | 0.89% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2166559005 | Simulated microbial communities from Lyon, France | Engineered | Open in IMG/M |
2170459006 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm | Environmental | Open in IMG/M |
2170459007 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm | Environmental | Open in IMG/M |
2170459008 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cm | Environmental | Open in IMG/M |
2170459009 | Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005575 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 | Environmental | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300010863 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction) | Environmental | Open in IMG/M |
3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
3300012353 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG | Environmental | Open in IMG/M |
3300012355 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG | Environmental | Open in IMG/M |
3300012358 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
cont_0048.00004000 | 2166559005 | Simulated | VLRTVSFARGETDEGLDVAQPIIVEGVLVVIRHPARGEFPAVVELQVREARRVR |
L01_00059280 | 2170459006 | Grass Soil | DFAAGETDEALNVATPIVVEGELRMIRHPALGELPAVVEVQVREARRVQ |
L02_05506370 | 2170459007 | Grass Soil | VEAAGPPGVLRAVHFAAGETDEALNVATPIVVEGELRMIRHPARGEFPAVVELQVREARRVR |
F48_02933940 | 2170459008 | Grass Soil | VLRTVSFARGETDEGLDVAQPIIVEGVLVVIRHPARGEFPAVVELQVRESRRVR |
F48_05636360 | 2170459008 | Grass Soil | GPPGCLRIVSFVKGETDEGLDVAQPLVVEGVLLVIRHPQRGGFPAVVEVQVRNPKRRVKSTK |
F47_00615180 | 2170459009 | Grass Soil | VLVEAASPPDVLRTVSFAKGETDEGLDVAQPVVVEGELVVIRHPARGKFPAVVELLVREARRVR |
F47_00992520 | 2170459009 | Grass Soil | CVEAAGPPGVLRTVSFARGETDEGLDVAQPIVVEGVLTVIRHPARGQFPAVVELQVREARRVW |
F47_05334660 | 2170459009 | Grass Soil | SPRRQTDEGLDLAQPIVVEGVLVVIRHPARGQFPAVVELQVREARRVR |
Ga0066388_1011667161 | 3300005332 | Tropical Forest Soil | PPGCLRVVAFHPTEDDTGLDMAELIVVEGELMVIQHPAWGEFWAVVALQVREARKVTY* |
Ga0066388_1013224051 | 3300005332 | Tropical Forest Soil | VLRVVSFAKGETDEGLDIAAPLVVEGELVVIRHPARGQFRAVVELQVREARRVR* |
Ga0066388_1020881901 | 3300005332 | Tropical Forest Soil | VLCVIVSPLAKTDEGLDILAPIVIEGELVVIRHPARGEFRAVVELQVREARRVR* |
Ga0066388_1060194172 | 3300005332 | Tropical Forest Soil | VSRTVQFARGETDEGLDILAPVVVEGEVRVIRHPPRGQFRALVEVQVREARRVR* |
Ga0066702_109263972 | 3300005575 | Soil | GGRLPWRWRRSETDEGLGLRRPIVVEGVLVVIRHPARGEFPAVVELQVREARRVR* |
Ga0066905_1000217524 | 3300005713 | Tropical Forest Soil | VLRVVSFTRGETDAGLDVAQPVVVEGELVVIRHPARGQFPAVVELQVREAKGVR* |
Ga0066905_1001078192 | 3300005713 | Tropical Forest Soil | MEAEGPPGCLRVVAFHPSETDEGLDVLAPIVVESELVVIRHPAWDGFPAVVELQVREARRGR* |
Ga0066905_1001765182 | 3300005713 | Tropical Forest Soil | VLRVVSFTRGETDEGLDVAQPIVVEGVLVVIRHPARDEFPAVVELQVREARRVR* |
Ga0066905_1001877712 | 3300005713 | Tropical Forest Soil | VLRTVHFAANETDEGLDVAQPIVVEGELVVIRHPARGQFPAAVELQVREAWRVR* |
Ga0066905_1001889151 | 3300005713 | Tropical Forest Soil | GETDEGLDVAQPIVVEGVLRVIRHPARGQLPAVVELQMQAA* |
Ga0066905_1002064092 | 3300005713 | Tropical Forest Soil | VIMGLQALGEDDEGLEVAEPVVVEGELVVIRHPARGQFRAIVELQVREARRVRN* |
Ga0066905_1002124862 | 3300005713 | Tropical Forest Soil | VQVEATGWLGLLRVVSFAKGETDEGLDIAAPLVVEGVLVVIRHPARGEFRAVVELQVREARRVRN* |
Ga0066905_1002326121 | 3300005713 | Tropical Forest Soil | VSRATRQNEAPEGLEILQPIVVEGVLTVIRHPAQWEFRAVVELQVREARRVR* |
Ga0066905_1004010732 | 3300005713 | Tropical Forest Soil | VLRTLQFAPGETHEGLDVAAPVVVEGELAVVRHPARGHFPAVVELQVREARKVTY* |
Ga0066905_1005542422 | 3300005713 | Tropical Forest Soil | MKRPGRGLDIAAPIVVEGELRVIRHPARGQFPAVVELQVRQARKVTY* |
Ga0066905_1008793742 | 3300005713 | Tropical Forest Soil | VLRTVQFARDETNEGLDVSQPIVVEGVLVVIRHPARGEFPAVVELQVREARRVR* |
Ga0066905_1009268902 | 3300005713 | Tropical Forest Soil | VLRTVQFAKGETDEGLDVAQPIVVEGLLQVIRHPGAGQFPAVVELQLREARQVR* |
Ga0066905_1009813442 | 3300005713 | Tropical Forest Soil | AGPPGVLRVVSFARGETDDGLDVVAPLVVEGEVVVIRHPPRGQFPAVTELQVREARRVR* |
Ga0066905_1017674022 | 3300005713 | Tropical Forest Soil | MGQTDEGLDVASPIVVEGELVVIRHPARGEFRAVVEVQLREAWLVAFCQQ* |
Ga0066905_1018016442 | 3300005713 | Tropical Forest Soil | VQVEATGRPGLLRVVSFAKGETDEGLDIAAPLVVEGVLVVIRHPARGEFSAVVELQVREARRAE* |
Ga0066903_1000322353 | 3300005764 | Tropical Forest Soil | VLRVVSFAAGETDEGLDVAQPIVVEGVLVVIRHRARGEFRAVVELQVREARQRRPGE* |
Ga0066903_1000766892 | 3300005764 | Tropical Forest Soil | VLRVVSFAKGETDEGLDVAQPIVVEGELVVIRHPAREEFPAVVELQVRDARRVGLP* |
Ga0066903_1001505564 | 3300005764 | Tropical Forest Soil | MEAEGPPGCLRVVAFHPSEIDEGLDVLAPIVVESELVVIRHPAWDGFPAVVELQVREARRGR* |
Ga0066903_1004763801 | 3300005764 | Tropical Forest Soil | VCGVLRVVSFAQGETDEGLDVLAPMVVEGELVVIWHPARGEFRAVIELQVRGAIRAASFVPSH* |
Ga0066903_1010124212 | 3300005764 | Tropical Forest Soil | LRTISFAKGESDEGLDVAQPVVVEGTLTVIRHPARGQFPAVVELQVREARRI* |
Ga0066903_1015609663 | 3300005764 | Tropical Forest Soil | DGRVLVEGAGPTGVQRKVHFAAGETDEGLNVAQPIVVESVLTVTGHPARGGFRAVVGLRVREARLVALCQQ* |
Ga0066903_1018419183 | 3300005764 | Tropical Forest Soil | VLRTVHFARGETDEGLDVVQPIVVEGELLVIRHPARGQFPAVVELQVRGARRVR* |
Ga0066903_1019607162 | 3300005764 | Tropical Forest Soil | VLRVVSFAAGETDEGLDVAQPIVVEGVLAVSRHPARGEFPAVTEVQVREARRGRN* |
Ga0066903_1021799482 | 3300005764 | Tropical Forest Soil | AAGAGDVLRVVVFAKGETDEGLDVLQPIVVEGLLLMIRHPARGEFPAVVEVQVREARRVR |
Ga0066903_1028854591 | 3300005764 | Tropical Forest Soil | TGETDGGLDVLAPLVVESELVLIQHPAWGQFPAVVELQVREARKVTY* |
Ga0066903_1030238322 | 3300005764 | Tropical Forest Soil | EAAGPGDVLRVVSFAKGETDEGLDVASPIVVEGELAVIRHPARGEFPAVVEMQVREARRVR* |
Ga0066903_1037108162 | 3300005764 | Tropical Forest Soil | VLRTVHFAAGETDEGLDVAKPIVVGGVLTVIRHPARGQFPAVVELQGREAWRGR* |
Ga0066903_1047836282 | 3300005764 | Tropical Forest Soil | SFATGETGEGLDNMAPVVVVGVLRVIRHPARGEFPAVIELRVREARGMQ* |
Ga0066903_1053161651 | 3300005764 | Tropical Forest Soil | MPVLVEAAGPLGMLRTVHFAASETDEGLAIAAPIVVEGELVVIRHPARGQFPAVVALQVRAAWRGRN* |
Ga0066903_1081497901 | 3300005764 | Tropical Forest Soil | GGVPVRATEPPGVLRTVLFARGETDENLDIMAPIVVEGVLRVIRHPARGQFPAVVELQVREARRVR* |
Ga0066659_118257841 | 3300006797 | Soil | VSFAWGETDEGLDILAPIVVEGVLVVIRHPARGQFPAVVELQLREARRVR* |
Ga0114129_111744321 | 3300009147 | Populus Rhizosphere | VQFARGETDEGVDVLAPTVVEGELRIIRRPARGQSPAIVEMQVREARRVQQPP* |
Ga0114129_123310121 | 3300009147 | Populus Rhizosphere | IDATGPPGVLRTVHFAPGETVKRLDLVQPIAVEGVLVVIRHPARGQFPAVVELQVREARQMQ* |
Ga0111538_138926431 | 3300009156 | Populus Rhizosphere | GEGDEGLDVLAPVVVEGVLRVIRHPARGQFPNVVEIQVREARRVE* |
Ga0105248_126812181 | 3300009177 | Switchgrass Rhizosphere | GEGDEGPDVVAPQVVEGILVVIRHPARGQFRAIVELQVRETRRVGGGAPC* |
Ga0126374_100466494 | 3300009792 | Tropical Forest Soil | KGEMDKGLDVLAPLVVESVLVAIRHPARGQFPAVVELPVREARRMQ* |
Ga0126374_111453821 | 3300009792 | Tropical Forest Soil | MCAAGETDEGLDVAQPIVVEGELVVIRHPAREEFPAVVELQVRDARRVGLP* |
Ga0126374_112093702 | 3300009792 | Tropical Forest Soil | VRRNPSPAPQPRTVQFAKGETDEGLDILQPVVVEGVLVVIRHPARGEFPAVVGLQVRDARRVR* |
Ga0126374_112178351 | 3300009792 | Tropical Forest Soil | MTGARARPVNFARSETDEGLDVLAPVLVEGMLVVIRPSARGQFPAVVELQLREARRVP* |
Ga0126374_113215332 | 3300009792 | Tropical Forest Soil | VLRVVTFAVGETDEGLDVVQPTVVEGELVVIRHPARGHFRAVVELQVREARRIR* |
Ga0126374_113586401 | 3300009792 | Tropical Forest Soil | VLRVVAFTTRETDEGLDVAVPIVVEGVLVVIRHPARGQFRAVVELQVGTRGR* |
Ga0126380_111122241 | 3300010043 | Tropical Forest Soil | VEAEGPPGCLRVVAFHPAEDDGGLDIAAPIVVEGVLVVIRHPARGAFRAVVELQVREARRAP* |
Ga0126380_120305072 | 3300010043 | Tropical Forest Soil | VLRELSFAKDETDEGLDVAQPIVVEGVLVVIRHPARGEFPAVVELQVREAFRVR* |
Ga0126384_106972112 | 3300010046 | Tropical Forest Soil | LKKELTNRRRTSWFAKGEMDKGLDVLAPLVVEGVLVVIRHPAWGEFPAVVELQVRGAERVS* |
Ga0126384_107783132 | 3300010046 | Tropical Forest Soil | VTDEGLDVAAPIVVEGELVVIRHPGRGEFRAVVELQVRQARKVTY* |
Ga0126384_111459741 | 3300010046 | Tropical Forest Soil | VLQTIHFAAGQPDEGLDVAQPIIVEGVLMMIRHPARGQFPAVVELQGREARRVRCATNQR |
Ga0126384_114723191 | 3300010046 | Tropical Forest Soil | AQRAARHPVRQGETDEGLDVAAPIVVEGVLVVIRHPARGQFPAVVELQVREARRVR* |
Ga0126382_100983561 | 3300010047 | Tropical Forest Soil | VLRVVAFTTRETDEGLDVAVPIVVEGVLVVIRHPARGQFRAVVELQVREAGRVR* |
Ga0126382_108032901 | 3300010047 | Tropical Forest Soil | VLRVVTFAAGESDEGLDDLAPIVVEGVLTVIRHPARGQFPAVVEVQVRQARRV |
Ga0126382_111890891 | 3300010047 | Tropical Forest Soil | VLRVVSFAQGETDEGLDVALPIVVEGELVVIRHPARGQFPAVVELQVREARRVR* |
Ga0126382_120085981 | 3300010047 | Tropical Forest Soil | VLRTIQFLVGEDEGLDIATPLVVEGELVVIRHPARGQFRAVVELQ |
Ga0126370_103527771 | 3300010358 | Tropical Forest Soil | VSFAKGESDEGLDVAEPIVVEGELVVIRHPARGQFRAVVEL |
Ga0126370_107161552 | 3300010358 | Tropical Forest Soil | VLRTLSFADGERGEGLDIQASVGVEGELVVIRHPTRGQFPAVVELQVRGARRMR* |
Ga0126376_114448363 | 3300010359 | Tropical Forest Soil | GRSGFLRTISFAKSESEEGLDALAPIVVEGVLRVIRHPARDQFPAVVELQVREARQVTY* |
Ga0126376_117707462 | 3300010359 | Tropical Forest Soil | DEVDGCILVEAAGPPGCLRVVAFHPAEGDEGLDVAAPIVVEGVLVVIRHPARGAFPAVGKLQVRGARKVTY* |
Ga0126376_128548481 | 3300010359 | Tropical Forest Soil | VVPTVQFAKGETDEGLDVAAPIVVAGVLVVIRHPARGEFRAVVELQVRKARRVR* |
Ga0126372_101297813 | 3300010360 | Tropical Forest Soil | SFAKGETDEGLDVAAPIVVEGELVVIRHPARGQFRAVVELQVMEARRGRS* |
Ga0126372_104492042 | 3300010360 | Tropical Forest Soil | TDEGLDIAQPIVVEGVLVVIRPPARGQFRAVVELQVREARRVR* |
Ga0126372_104657113 | 3300010360 | Tropical Forest Soil | MHFAAAETDEGLDLLQPIVVAGELVVIRHPARGEFRAVVELQVRKERRVQ* |
Ga0126372_106648481 | 3300010360 | Tropical Forest Soil | VVRTISFAKGEPDEGLDVAQPIVVEGEPVVIRHRARGQFPAVVELQVREARRVR* |
Ga0126372_109979711 | 3300010360 | Tropical Forest Soil | VLRVIGSPLAKTDEGLDILTPIVVEGDLVVIQHPARGQFPPVVELQVREARRVR* |
Ga0126372_120080051 | 3300010360 | Tropical Forest Soil | VLRTVQFARDETAEDLDVLAPIVVEGVLRVIRHPARGEFRAVVELQVREARRGR* |
Ga0126372_121940471 | 3300010360 | Tropical Forest Soil | VSRTVQFARGETDEGLDVAPSIVVEGELVVIRHPARGHFRAVVEVQVREARKVTH |
Ga0126378_127370962 | 3300010361 | Tropical Forest Soil | GVLRCVEFAPGECEEGLDVLAPIVVEGVLVVRHHPAWGEFPAVEEVLVREARRVTDFP* |
Ga0126377_117428991 | 3300010362 | Tropical Forest Soil | ETDEGLDVAKPIVVEGELVVIRHPARGEFRAVVEVQVREAWLVAFCQQ* |
Ga0126377_124407381 | 3300010362 | Tropical Forest Soil | LRTVSFARGETDEGLDVLAPIVVEDVLRVIRHPARGEFRAVVELQVREARRGR* |
Ga0126377_133057992 | 3300010362 | Tropical Forest Soil | MGLQALGEDDDGLDVAEPTVVEGELVVIRHLARGEFPAVVELQVREAR |
Ga0126379_107577771 | 3300010366 | Tropical Forest Soil | VWAVEAAGPPGCLRVVAFDPGEDDEGLDVVAPQVVEGVLVLTRHPARGQFPAVTELQVRDARRVRPGA* |
Ga0126379_108496871 | 3300010366 | Tropical Forest Soil | QTDEGLDIAAPIVVEGELVVIRHLAREEFPAVVELQVRDARRVGLP* |
Ga0126379_120011352 | 3300010366 | Tropical Forest Soil | GCILVEAAGPPGCLRVVAFHPAAGDEGLDVAAPIVVEGVLVVIRHPARGAFPAVGKLQVRGARKVTY* |
Ga0126379_126998311 | 3300010366 | Tropical Forest Soil | LAAGPPGVLRTVHSAAGETDEGLDIAAPIVVEGELVVIRHPARGQFRAVVELQVRKERRVQ* |
Ga0126379_137063141 | 3300010366 | Tropical Forest Soil | VFAAGETDEDLDVAVPIVVEGELVVIRHPARGRFLAVVEVQVRPARRVRN* |
Ga0126383_102304342 | 3300010398 | Tropical Forest Soil | VLRVVAFTPRETDEGLDVAVPIVVEGVLVVIRHPARGQFRAVVELQVGTRGR* |
Ga0126383_118260421 | 3300010398 | Tropical Forest Soil | VLRVIVSPLAKTDEGLDVAQPIVVEGVLTVIRHPARGQFPAVVELEARRRSGCGTEAGTG |
Ga0126383_122170452 | 3300010398 | Tropical Forest Soil | VFDPREGDEGLDVVAPQVVEGVLVLTRHPARGGFAAVTELQVRDARRLRQA* |
Ga0126383_122554602 | 3300010398 | Tropical Forest Soil | LLRTVQFAKGESDDGLDLVQPIVVEGVLVVIRHPARGEFPAVVELQVREVWRVR* |
Ga0126383_132942392 | 3300010398 | Tropical Forest Soil | VAFAKGETDEGLDVVEPVVVEGVLTVIRHPARGEFPAVVELQVREARRVQ* |
Ga0126383_132942393 | 3300010398 | Tropical Forest Soil | VLRVVSFARGETDDGLDVVAPLVVEGEVVVIRHPPRGQFPAVTELQVREARRVR* |
Ga0126383_135902612 | 3300010398 | Tropical Forest Soil | SVVSFAVGETDEDLDVAQPIVVEGVLVVIRHPARGEFPAVVELQVWEARRGW* |
Ga0124850_10587882 | 3300010863 | Tropical Forest Soil | DEGLDVLQPIVVEGLLLMIRHPARGEFPAVVEVQVREARRVR* |
Ga0137365_108642081 | 3300012201 | Vadose Zone Soil | PGEDDEGLDVVAPQVVEGVLVVIRHPARGEFPAVLELQVRDARRVRGP* |
Ga0137374_101627091 | 3300012204 | Vadose Zone Soil | CRPGVLRTVSSAKGEDDDGLDMAQPIVVEGVLAVIRHPARGEFPAVVEVQVREARRVR* |
Ga0137374_101838213 | 3300012204 | Vadose Zone Soil | VRRVVVFAAGETDEDLDVAPPVVVEGVLQVIRHLARGGFPAVVEVQVREAWRVW* |
Ga0137374_102486963 | 3300012204 | Vadose Zone Soil | VEAAGAGGVLRIVSFPKGETDEGLDVAQPIVVEGELMVIRHPARGQFPVVVELQVRDSKRRVK* |
Ga0137374_102789232 | 3300012204 | Vadose Zone Soil | VSFARGEADEGLDVLRPIVVEGVLLVIRHRARGQFREVVELRLEEARWVP* |
Ga0137374_104442541 | 3300012204 | Vadose Zone Soil | VLRVVSFAKGEDDAGLDVARPVVVEGELVVIRHPARGEFLAVVELQVREARRVR* |
Ga0137374_106244321 | 3300012204 | Vadose Zone Soil | LIVVQAVAQADEGLDVQAPVVVEGKLVVIRHRARGEFPAVVEVQVREARRVRN* |
Ga0137372_104510821 | 3300012350 | Vadose Zone Soil | LRTVSFARGQTDEGLDLVQPIFVEGVLVVIRHPARGAFPAVLELQVREPRRVQ* |
Ga0137367_110396321 | 3300012353 | Vadose Zone Soil | VTFAQGQTDEGLDIAQPIVVEGELVVIRHPARGQFPAVVEVQVREARRVR* |
Ga0137369_105595492 | 3300012355 | Vadose Zone Soil | VVVFAAGETDEDLDVAPPVVVEGVLQVIRHLARGGFPAVVEVQVREAWRVW* |
Ga0137368_103282302 | 3300012358 | Vadose Zone Soil | SPCLIVVQAVAQADEGLDVQAPVVVEGKLVVIRHRARGEFPAVVEVQVREARRVRN* |
Ga0150984_1099183521 | 3300012469 | Avena Fatua Rhizosphere | RSASLPAERAGPPGVLPTTSFTRGEVDEGLDLLRPIVVEGFLIVIRHPARGEFPAVVGLQVREARRVR* |
Ga0150984_1164725781 | 3300012469 | Avena Fatua Rhizosphere | LRSVHFAKGKTEEGLDLLALLIVEGVLVVIRHPARRQFPAVVKLQVREAQRAR* |
Ga0137373_108487902 | 3300012532 | Vadose Zone Soil | LRTVSFARSETDEALDVLAPVVIEGVLVVLRHPTRGEFPEVVELRLRSARRGR* |
Ga0137419_113471092 | 3300012925 | Vadose Zone Soil | GETDEGLDVFAPVVVEGVLVVIRHPARDQFPAVVEVREARRVR* |
Ga0126375_111016712 | 3300012948 | Tropical Forest Soil | LRTVHFAKGETDEGLDVAAPVVVEGEMVVLRHPARGEFPAVVKLQ |
Ga0126369_113462711 | 3300012971 | Tropical Forest Soil | MTAASCSPGLLRTISFAKGESDEGLRHVQPLVVEGELVVIRHPARGQFPAVVEL* |
Ga0318541_108164601 | 3300031545 | Soil | VLMCAAGETDDGLDVAQPVVEGVLLVIRHPARGQFRAVVELQVREARRVR |
Ga0306920_1006060692 | 3300032261 | Soil | VSVRQKVEADGPPGCLRVVAFDTGEGDEGLNVLAPQAVEGVLMVIRHPARGAFPVVVEL |
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