Metagenome / Metatranscriptome Family F083904

Basic Information
Family ID	F083904
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	40 residues
Representative Sequence	LIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Number of Associated Samples	95
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (56.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.321 % of family members)
Environment Ontology (ENVO)	Unclassified (51.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.536 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.59% β-sheet: 0.00% Coil/Unstructured: 54.41%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF02403	Seryl_tRNA_N	77.68
PF01135	PCMT	3.57
PF00717	Peptidase_S24	3.57
PF02515	CoA_transf_3	2.68
PF01975	SurE	1.79
PF07171	MlrC_C	0.89
PF01037	AsnC_trans_reg	0.89
PF00871	Acetate_kinase	0.89
PF02699	YajC	0.89
PF02167	Cytochrom_C1	0.89
PF14534	DUF4440	0.89
PF01476	LysM	0.89
PF07549	Sec_GG	0.89
PF14588	YjgF_endoribonc	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	77.68
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	3.57
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	3.57
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	3.57
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	3.57
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.68
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	1.79
COG0282	Acetate kinase	Energy production and conversion [C]	0.89
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG1862	Protein translocase subunit YajC	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG2857	Cytochrome c1	Energy production and conversion [C]	0.89
COG3426	Butyrate kinase	Energy production and conversion [C]	0.89
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.71 %
Unclassified	root	N/A	39.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.71 %
Unclassified	root	N/A	39.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.25 %
Unclassified	root	N/A	39.29 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.46 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.57 %
Unclassified	root	N/A	39.29 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.68 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.68 %
Unclassified	root	N/A	39.29 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2.68 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.79 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	47.32 %
Unclassified	root	N/A	39.29 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	2.68 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	41.07 %
Unclassified	root	N/A	39.29 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2.68 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.68 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.68 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	41.07 %
Unclassified	root	N/A	39.29 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	2.68 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10114348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1111	Open in IMG/M
3300002568\|C688J35102_118482127	Not Available	564	Open in IMG/M
3300005332\|Ga0066388_104539578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	707	Open in IMG/M
3300005446\|Ga0066686_10649637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	716	Open in IMG/M
3300005557\|Ga0066704_10882168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	554	Open in IMG/M
3300005587\|Ga0066654_10184343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1078	Open in IMG/M
3300005764\|Ga0066903_101420529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1305	Open in IMG/M
3300005764\|Ga0066903_101608027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1233	Open in IMG/M
3300006028\|Ga0070717_11976960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	526	Open in IMG/M
3300006804\|Ga0079221_11574829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	531	Open in IMG/M
3300006854\|Ga0075425_102971341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	519	Open in IMG/M
3300006954\|Ga0079219_11407750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	623	Open in IMG/M
3300007265\|Ga0099794_10557581	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300009038\|Ga0099829_11761427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300009400\|Ga0116854_1114272	Not Available	763	Open in IMG/M
3300010343\|Ga0074044_10457616	Not Available	834	Open in IMG/M
3300010361\|Ga0126378_12505972	Not Available	589	Open in IMG/M
3300010361\|Ga0126378_13462523	Not Available	501	Open in IMG/M
3300010376\|Ga0126381_103967832	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012206\|Ga0137380_10559805	Not Available	1003	Open in IMG/M
3300012210\|Ga0137378_10396858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1280	Open in IMG/M
3300012350\|Ga0137372_11176215	Not Available	520	Open in IMG/M
3300012361\|Ga0137360_11873113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	506	Open in IMG/M
3300012917\|Ga0137395_11149391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	547	Open in IMG/M
3300012917\|Ga0137395_11292386	Not Available	504	Open in IMG/M
3300012971\|Ga0126369_10550671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1218	Open in IMG/M
3300015241\|Ga0137418_10852904	Not Available	676	Open in IMG/M
3300015264\|Ga0137403_10352394	Not Available	1358	Open in IMG/M
3300016357\|Ga0182032_11207748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	651	Open in IMG/M
3300016371\|Ga0182034_10594274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	933	Open in IMG/M
3300016371\|Ga0182034_11021139	Not Available	715	Open in IMG/M
3300016422\|Ga0182039_11355088	Not Available	645	Open in IMG/M
3300016445\|Ga0182038_10100104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2103	Open in IMG/M
3300016445\|Ga0182038_12199045	Not Available	500	Open in IMG/M
3300017970\|Ga0187783_11368146	Not Available	510	Open in IMG/M
3300017975\|Ga0187782_10885043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	692	Open in IMG/M
3300018001\|Ga0187815_10156043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300018482\|Ga0066669_10966062	Not Available	767	Open in IMG/M
3300020579\|Ga0210407_10197076	Not Available	1564	Open in IMG/M
3300020583\|Ga0210401_10659536	Not Available	907	Open in IMG/M
3300021178\|Ga0210408_10207240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1560	Open in IMG/M
3300021420\|Ga0210394_11140473	Not Available	671	Open in IMG/M
3300021432\|Ga0210384_11662256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	544	Open in IMG/M
3300021441\|Ga0213871_10154641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	699	Open in IMG/M
3300021474\|Ga0210390_10370332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1212	Open in IMG/M
3300021476\|Ga0187846_10192334	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300022525\|Ga0242656_1134749	Not Available	511	Open in IMG/M
3300022712\|Ga0242653_1093034	Not Available	544	Open in IMG/M
3300022724\|Ga0242665_10257311	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300027568\|Ga0208042_1121252	Not Available	659	Open in IMG/M
3300027829\|Ga0209773_10269206	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	711	Open in IMG/M
3300027968\|Ga0209061_1122792	Not Available	876	Open in IMG/M
3300030730\|Ga0307482_1321819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	502	Open in IMG/M
3300031573\|Ga0310915_10876720	Not Available	630	Open in IMG/M
3300031679\|Ga0318561_10427965	Not Available	728	Open in IMG/M
3300031708\|Ga0310686_105107830	Not Available	727	Open in IMG/M
3300031719\|Ga0306917_10019475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4155	Open in IMG/M
3300031736\|Ga0318501_10043390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2065	Open in IMG/M
3300031744\|Ga0306918_10769711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	752	Open in IMG/M
3300031748\|Ga0318492_10151779	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1169	Open in IMG/M
3300031753\|Ga0307477_10169810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1521	Open in IMG/M
3300031763\|Ga0318537_10023093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2178	Open in IMG/M
3300031763\|Ga0318537_10071583	Not Available	1270	Open in IMG/M
3300031763\|Ga0318537_10134013	Not Available	921	Open in IMG/M
3300031768\|Ga0318509_10065290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1897	Open in IMG/M
3300031769\|Ga0318526_10196081	Not Available	825	Open in IMG/M
3300031770\|Ga0318521_10180250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1212	Open in IMG/M
3300031778\|Ga0318498_10127949	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1155	Open in IMG/M
3300031779\|Ga0318566_10052533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1939	Open in IMG/M
3300031781\|Ga0318547_10496455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	754	Open in IMG/M
3300031793\|Ga0318548_10358024	Not Available	716	Open in IMG/M
3300031794\|Ga0318503_10118143	Not Available	848	Open in IMG/M
3300031799\|Ga0318565_10082919	Not Available	1526	Open in IMG/M
3300031805\|Ga0318497_10166770	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1210	Open in IMG/M
3300031805\|Ga0318497_10851710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	511	Open in IMG/M
3300031821\|Ga0318567_10105796	Not Available	1527	Open in IMG/M
3300031833\|Ga0310917_10474332	Not Available	852	Open in IMG/M
3300031879\|Ga0306919_11422386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	523	Open in IMG/M
3300031890\|Ga0306925_11784911	Not Available	590	Open in IMG/M
3300031896\|Ga0318551_10098699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1552	Open in IMG/M
3300031897\|Ga0318520_10721542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	623	Open in IMG/M
3300031897\|Ga0318520_10875459	Not Available	565	Open in IMG/M
3300031912\|Ga0306921_10326548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1795	Open in IMG/M
3300031912\|Ga0306921_11171355	Not Available	857	Open in IMG/M
3300031942\|Ga0310916_10583858	Not Available	950	Open in IMG/M
3300031946\|Ga0310910_10810081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	737	Open in IMG/M
3300031946\|Ga0310910_11071434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	628	Open in IMG/M
3300031947\|Ga0310909_11645567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	508	Open in IMG/M
3300031954\|Ga0306926_10215591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2382	Open in IMG/M
3300032001\|Ga0306922_10440735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1393	Open in IMG/M
3300032035\|Ga0310911_10332231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	876	Open in IMG/M
3300032051\|Ga0318532_10037514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1637	Open in IMG/M
3300032055\|Ga0318575_10018090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2898	Open in IMG/M
3300032055\|Ga0318575_10546188	Not Available	588	Open in IMG/M
3300032055\|Ga0318575_10671430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	524	Open in IMG/M
3300032060\|Ga0318505_10015657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2854	Open in IMG/M
3300032063\|Ga0318504_10368026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	683	Open in IMG/M
3300032064\|Ga0318510_10052942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1441	Open in IMG/M
3300032065\|Ga0318513_10034953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2192	Open in IMG/M
3300032065\|Ga0318513_10105299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1323	Open in IMG/M
3300032066\|Ga0318514_10540269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	620	Open in IMG/M
3300032068\|Ga0318553_10188370	Not Available	1075	Open in IMG/M
3300032068\|Ga0318553_10320157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	811	Open in IMG/M
3300032091\|Ga0318577_10387899	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	667	Open in IMG/M
3300032205\|Ga0307472_102240447	Not Available	552	Open in IMG/M
3300033289\|Ga0310914_11612676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	552	Open in IMG/M
3300033290\|Ga0318519_10429512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	789	Open in IMG/M
3300033290\|Ga0318519_10991481	Not Available	521	Open in IMG/M
3300033412\|Ga0310810_10001038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	28331	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Aquatic	Environmental → Aquatic	1.79%
Plants	Host-Associated → Plants	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.54%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Cave	Environmental → Terrestrial → Cave	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.61%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083904

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101143481	3300001867	Forest Soil	FEASIISCRMVEKARAKREAEEEAELAGKAKPAPGGG*
C688J35102_1184821272	3300002568	Soil	LVLYEASIISCRMVEKAQAKREAELDAELAGTGKPAAGE*
Ga0066388_1045395781	3300005332	Tropical Forest Soil	IVLFEASIISCRMVEKARARREAEEEAELTGKAKPAPGG*
Ga0066686_106496372	3300005446	Soil	TSLAVPLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGG*
Ga0066704_108821681	3300005557	Soil	GLSILSCRWVEKARAKREAAEEADLAGGKAAPGE*
Ga0066654_101843431	3300005587	Soil	ILYFLSIYSCRLVEKARAKREAEEEAELAGSGKPAAGK*
Ga0066903_1014205291	3300005764	Tropical Forest Soil	FEASIISCRMVEKARARREAEEEAELTGKAKPAPGA*
Ga0066903_1016080272	3300005764	Tropical Forest Soil	LYEASIISCRMVEKARARREAEEEAELMGKAKSAPGA*
Ga0070717_119769601	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ILYEASILSCRMVEKARAKREAEEEAELAGKGKPAGGT*
Ga0079221_115748291	3300006804	Agricultural Soil	SLAIPLVILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGG*
Ga0075425_1029713411	3300006854	Populus Rhizosphere	LIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGG*
Ga0079219_114077501	3300006954	Agricultural Soil	TSLAIPLIILYEASIISCRMVEKARARREAQEEAELTGKGKPAPGT*
Ga0099794_105575811	3300007265	Vadose Zone Soil	ILLYEISIVSCRMVEKARAKREAAEEAELSGGSKPAAGE*
Ga0099829_117614272	3300009038	Vadose Zone Soil	YEASIIACRMVERARARREAAEEAELAAGGGPAPGE*
Ga0116854_11142721	3300009400	Soil	VLLYEGSIIAARMVEKARAKREAEEEAEVSGTSGPAADA*
Ga0074044_104576161	3300010343	Bog Forest Soil	EASIISCRMVEKARARREAEEEAELAGKAKPAPGA*
Ga0126378_125059722	3300010361	Tropical Forest Soil	EASIISCRMVEKARARREAEEEAELTGKAKPAAGA*
Ga0126378_134625232	3300010361	Tropical Forest Soil	IALFEASIVSCRMVERARARREAQEEAELAGKAKPATGG*
Ga0126381_1039678322	3300010376	Tropical Forest Soil	LFEASIISCRLVEKARARREAEEEAELAGKATPAGGE*
Ga0126350_112585952	3300010880	Boreal Forest Soil	VLSIFSCKWVEKQRAKREAEEEADLADKGGPAAGE*
Ga0137380_105598051	3300012206	Vadose Zone Soil	SIISCRMVEKARAKREAEEEAELAGGSNPATPGE*
Ga0137378_103968581	3300012210	Vadose Zone Soil	PLIILYEVSIISCRMVEKARAKREAEEEAELAGGSNPATPGE*
Ga0137372_111762151	3300012350	Vadose Zone Soil	LIILYEVSIVSCRMVEKARAKREAEEEAELAGGSNPATPGE*
Ga0137360_118731131	3300012361	Vadose Zone Soil	SLAIPLIILFEVSIISCRMVEKARARREAEEEAELAGKGKPAGT*
Ga0137395_111493911	3300012917	Vadose Zone Soil	IPLMILFEASIISCRMVEKARARREAEEEAELAGKGKPAPGA*
Ga0137395_112923861	3300012917	Vadose Zone Soil	ILYEASIISCRMVEKARAKREAEEEAELAGKGKPAAGT*
Ga0126369_105506711	3300012971	Tropical Forest Soil	SLAIPLIVLWEASIVSCRMVEKARAKREAEEEAELAGKGKPATGG*
Ga0137418_108529041	3300015241	Vadose Zone Soil	SIVSCRMVEKARAKREAEDEAELADGGNPAAPGE*
Ga0137403_103523942	3300015264	Vadose Zone Soil	MREASIISCRMVEKARARREAEEEAELTGKGKPAAGA*
Ga0182032_112077481	3300016357	Soil	VPLILLFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0182034_105942742	3300016371	Soil	LAVPLILLFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0182034_110211391	3300016371	Soil	ILWEASIVSCRMVEKARARREAEEEAELAGKGKPATSA
Ga0182039_113550882	3300016422	Soil	LILLFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0182038_101001041	3300016445	Soil	TSLAVPLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAPGA
Ga0182038_121990452	3300016445	Soil	FEASIISCRMVEKARARREAEEEAELAGKGKPAPGA
Ga0187783_113681462	3300017970	Tropical Peatland	LYEISIISCGFVERARARREAELDAEIDGKKPEEK
Ga0187782_108850432	3300017975	Tropical Peatland	SQTSLAIPLIILWEASIVSCRMVEKARARREAEEEAELAGKGKPATSA
Ga0187815_101560432	3300018001	Freshwater Sediment	LIILFEASIISCRMVEKARAKREAEEEAELAGTVTPAAGE
Ga0066669_109660622	3300018482	Grasslands Soil	LYEASIISCRMVEKARARREAEEEAELTGKGKPAAGT
Ga0210407_101970762	3300020579	Soil	FEVSIISCRMVEKARARREAEEEAELTGKAKPAAGA
Ga0210401_106595361	3300020583	Soil	ASIISCRMVEKARARREAEEEAELAGKAKPAAPGA
Ga0210408_102072403	3300021178	Soil	SLAIPLMILFEASIISCRMVEKARARREAEEEAELAGKGKPAPGG
Ga0210394_111404732	3300021420	Soil	LIILFEASIISCRMVERARAKREAAEEAEIAGKGTPAAGE
Ga0210384_116622562	3300021432	Soil	VPLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0213871_101546411	3300021441	Rhizosphere	IPLIILFEASIVSCRLVEKARARREAEEEAELAGKGKPAAGT
Ga0210390_103703322	3300021474	Soil	TSLAIPLIILFEVSIISCRMVEKARARREAEEEAELAGKGKPAAGT
Ga0187846_101923342	3300021476	Biofilm	TSLAIPLIVLFEASIISCRMVEKARAKREAQEEAELLGKGTPAAGE
Ga0242656_11347491	3300022525	Soil	LIILFEASIISCRMVEKARARREAEEEAELTGKGKPAAGT
Ga0242653_10930341	3300022712	Soil	IILFEVSIISCRMVEKARARREAEEEAELAGKGKPAAGT
Ga0242665_102573112	3300022724	Soil	FEASIISCRMVERARAKREAAEEAELAGKGTPAAGE
Ga0208042_11212522	3300027568	Peatlands Soil	LIILFEASIISCRMVEKARAKREAAEEAELAGKGTPAPGG
Ga0209773_102692061	3300027829	Bog Forest Soil	LIILFEASIISCRMVEKARAKREAQEEAELAGKGDPTAGG
Ga0209061_11227922	3300027968	Surface Soil	ALPMIALFEASIFSCRLVEKARARREAEEEAALAGKGNPASTA
Ga0307482_13218191	3300030730	Hardwood Forest Soil	SLAIPLIILFEASIVSCRLVEKARARREAEEEAELAGKGKPAAGT
Ga0310915_108767202	3300031573	Soil	LIILFEASIISCRMVEKARARREAEEEAELAGKAKPAPGA
Ga0318561_104279651	3300031679	Soil	FEASIISCRMVEKARAKREAEEEAELAGKAKAAPGG
Ga0310686_1051078301	3300031708	Soil	LFEASIISCRMVEKARAKREAEEEAELAGKGNPAAGE
Ga0306917_100194751	3300031719	Soil	EASIISCRMVEKARARREAEEEAELAGKAKPAPGA
Ga0318501_100433901	3300031736	Soil	LFEASIISCRMVEKARARREAEEEAELAGKAKPAPGA
Ga0306918_107697111	3300031744	Soil	PLMILFEASIISCRMVEKARAKREAEEEAELAGKAKPAPGGG
Ga0318492_101517791	3300031748	Soil	IVLFEASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0307477_101698102	3300031753	Hardwood Forest Soil	IILYEVSIYSCRMVEKARAKREAEEEADLAGGDTPAAGA
Ga0307477_107158581	3300031753	Hardwood Forest Soil	YFLSIFSCRWVERQRAKREAEEEAEQSGGSGPATGV
Ga0318537_100230933	3300031763	Soil	LAVPLIILFEASIISCRMVEKARARREAEEEAELAGKGKPAAGA
Ga0318537_100715832	3300031763	Soil	YEASIISCRMVEKARARREAEEEAELAGKGKPAAGT
Ga0318537_101340131	3300031763	Soil	IILFEASIISCRMVEKARARREAEEEAELAGRAKPAPGA
Ga0318509_100652901	3300031768	Soil	TSLAVPLIVLFEASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0318526_101960811	3300031769	Soil	IILFEASIISCRMVEKARARREAEEEAELAGKAKPAPGA
Ga0318521_101802501	3300031770	Soil	AVPLIILFEASIISCRMVEKARARREAEEEAELAGRAKPAPGA
Ga0318498_101279491	3300031778	Soil	EASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0318566_100525331	3300031779	Soil	ALYEASIISCRMVEKARARREAEEEAELAGKAKPATGG
Ga0318547_104964551	3300031781	Soil	LLFRLAVPLILLFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0318548_103580241	3300031793	Soil	ILFEASIISCRMVEKARARREAEEEAELAGKGKPAAGA
Ga0318503_101181431	3300031794	Soil	LFEASIISCRMVEKARAKREAEEEAELAGKAKAAPGG
Ga0318565_100829192	3300031799	Soil	EASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0318497_101667702	3300031805	Soil	ILFEASIISCRMVEKARARREAEEEAELAGRAKPAPGA
Ga0318497_108517101	3300031805	Soil	LALPLIALYEASIISCRMVEKARARREAEEEAELAGKGKPAPGV
Ga0318567_101057961	3300031821	Soil	FEASIISCRMVEKARARREAEEEAELTGKAKPAPGA
Ga0310917_104743321	3300031833	Soil	LFEASIYSCRMVEKARARREAQEEAELAGKAKPAAGA
Ga0306919_114223862	3300031879	Soil	SLAIPLIILWEASIVSCRMVEKARARREAEEEAELAGKGKPATSA
Ga0306925_117849112	3300031890	Soil	LLFEASILSCRLVEKTRAKREAEEEAELAGKGKPAAGV
Ga0318551_100986991	3300031896	Soil	VPLIVLFEASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0318520_107215422	3300031897	Soil	TSLAVPLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0318520_108754592	3300031897	Soil	IILFEASIISCRMVEKARAKREAQEEAELAGKGNPAAGE
Ga0306921_103265481	3300031912	Soil	IILFEASIISCRMVEKARARREAEEEAELAGKGKPAPGA
Ga0306921_111713552	3300031912	Soil	LIVLFEASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0310916_105838582	3300031942	Soil	IILWEASIVSCRMVEKARARREAEEEAELAGKGKPATSA
Ga0310910_108100811	3300031946	Soil	QTSLAVPLILLFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0310910_110714342	3300031946	Soil	PLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAPGA
Ga0310909_116455672	3300031947	Soil	LAIPLIALFEASIISCRMVEKARARREAEEEAELMGKAKSAPGA
Ga0306926_102155914	3300031954	Soil	LIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0306922_104407351	3300032001	Soil	LAVPLIILFEASIISCRMVEKARARREAEEEAELAGKVKPAAGA
Ga0310911_103322312	3300032035	Soil	LAVPLIILFEASIYSCRMVEKARARREAQEEAELAGKAKPAAGA
Ga0318532_100375143	3300032051	Soil	YEASIISCRMVEKARARREAEEEAELTGKAKPAAGG
Ga0318575_100180901	3300032055	Soil	PLIVLFEASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0318575_105461881	3300032055	Soil	LYEASIISCRMVEKARARREAEEEAELAGKGKPAAGT
Ga0318575_106714301	3300032055	Soil	AVPLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0318505_100156571	3300032060	Soil	SLALPLMILYEASIISCRMVEKARARREAEEEAELTGKAKPAAGG
Ga0318504_103680261	3300032063	Soil	LALPLMILYEASIISCRMVEKARARREAEEEAELTGKAKPAAGG
Ga0318510_100529422	3300032064	Soil	LAVPLIILFEASIISCRMVEKARARREAEEEAELAGRAKPAPGA
Ga0318513_100349533	3300032065	Soil	LAVPLIVLFEASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0318513_101052992	3300032065	Soil	SLAVPLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0318514_105402691	3300032066	Soil	TSLAVPLIILFEASIISCRMVEKARARREAEEEAELAGRAKPAPGA
Ga0318553_101883702	3300032068	Soil	FEASIVSCRMVEKARARREAQEEAELAGKAKPATGG
Ga0318553_103201572	3300032068	Soil	LAIPLIILFEASIISCRMVEKARARREAEEEAELAGKAKPAAGA
Ga0318577_103878992	3300032091	Soil	LFEASIISCRMVEKARAKREAQEEAELAGKGNPAAGE
Ga0307472_1022404472	3300032205	Hardwood Forest Soil	FEASIISCRMVEKARARREAEEEAELAGKGKPATGG
Ga0335079_120145641	3300032783	Soil	YFLSIFSCRWVEKQRAKREAEEDAELSGGGNQAAGE
Ga0310914_116126762	3300033289	Soil	VPLIILFEASIISCRMVEKARARREAEEEAELAGRAKPAPGA
Ga0318519_104295121	3300033290	Soil	QTSLAVPLIVLFEASIISCRMVERARARREAEEEAELAGKAKPAAGA
Ga0318519_109914812	3300033290	Soil	MILFEASIISCRMVEKARAKREAEEEAELAGKAKAAPGG
Ga0310810_100010381	3300033412	Soil	SLAVPLIILYFLSIYSCRLVEKARAKREAEEEAELAGGGKPAAGE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign