Metagenome / Metatranscriptome Family F083895

Basic Information
Family ID	F083895
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	75 residues
Representative Sequence	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	41.96 %
% of genes from short scaffolds (< 2000 bps)	78.57 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (51.786 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (51.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.393 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1M3P_100504612 2JGI12421J11937_100141593 3JGI24768J34885_100407691 4JGI25908J49247_100079302 5JGI25907J50239_10794671 6JGI25917J50250_10328402 7JGI25922J50271_101066222 8JGI25914J50564_100061595 9JGI25913J50563_10141151 10JGI25926J51410_10513002 11Ga0070374_105213842 12Ga0049081_100208031 13Ga0049080_100292722 14Ga0049082_102543771 15Ga0075464_100794552 16Ga0075459_10433842 17Ga0102875_12234752 18Ga0102877_11626961 19Ga0102880_11038991 20Ga0102917_11363472 21Ga0102918_10476031 22Ga0102919_11005291 23Ga0102923_11325831 24Ga0102897_11186962 25Ga0102872_11285822 26Ga0102878_10306952 27Ga0102894_10359062 28Ga0102901_11789452 29Ga0102901_12195821 30Ga0102906_10529411 31Ga0102902_11785251 32Ga0102902_12201352 33Ga0105737_11906991 34Ga0105748_104255922 35Ga0102893_12331242 36Ga0114354_10929381 37Ga0114354_11616821 38Ga0114336_10319311 39Ga0104242_10008382 40Ga0102829_10953991 41Ga0102864_11801301 42Ga0114973_104950532 43Ga0114980_100178546 44Ga0114980_101566212 45Ga0114980_102252721 46Ga0114980_107985602 47Ga0114981_100972892 48Ga0114970_102415712 49Ga0114970_103589831 50Ga0114975_100156856 51Ga0114975_100274461 52Ga0114969_101977221 53Ga0114971_106470482 54Ga0136236_10245752 55Ga0102883_11630071 56Ga0139557_10009382 57Ga0151620_12027872 58Ga0119951_10049272 59Ga0119955_10457052 60Ga0157210_10459942 61Ga0164292_102902262 62Ga0187842_11911832 63Ga0187843_102215562 64Ga0187843_103483611 65Ga0211732_11468841 66Ga0211736_103512272 67Ga0211729_104461302 68Ga0210301_13167472 69Ga0222712_100221483 70Ga0214917_100555552 71Ga0214917_101551111 72Ga0214921_100643634 73Ga0244777_102118092 74Ga0244776_100560444 75Ga0208147_10834012 76Ga0255106_10180342 77Ga0255082_10526901 78Ga0255113_10660712 79Ga0255115_10253122 80Ga0208554_10594992 81Ga0208024_10520992 82Ga0208446_10952262 83Ga0208801_10214292 84Ga0255133_10235251 85Ga0255137_10049901 86Ga0209247_10567222 87Ga0255084_10601372 88Ga0208682_10354412 89Ga0255085_11119281 90Ga0209552_10167072 91Ga0209651_10460172 92Ga0255119_10299772 93Ga0209357_10476031 94Ga0209551_10186261 95Ga0209087_10076064 96Ga0209596_13239511 97Ga0209296_10527912 98Ga0209598_103122802 99Ga0209088_100842612 100Ga0209088_101115771 101Ga0209134_100299272 102Ga0209500_100592592 103Ga0209550_101336161 104Ga0209191_10166051 105Ga0209298_100794341 106Ga0304730_11001552 107Ga0315908_113733662 108Ga0315905_100280699 109Ga0315905_102847812 110Ga0315905_114445911 111Ga0335023_0003779_2801_3001 112Ga0335019_0329379_358_597
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1M3P_100504612 2JGI25922J50271_101066222 3Ga0102864_11801301 4Ga0114981_100972892 5Ga0209596_13239511 6Ga0209134_100299272 7Ga0335023_0003779_2801_3001
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1M3P_100504612 2JGI25922J50271_101066222 3Ga0102864_11801301 4Ga0114981_100972892 5Ga0209596_13239511 6Ga0209134_100299272 7Ga0335023_0003779_2801_3001
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.49% β-sheet: 0.00% Coil/Unstructured: 40.51%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF16177	ACAS_N	59.82
PF01116	F_bP_aldolase	13.39
PF00501	AMP-binding	6.25
PF10576	EndIII_4Fe-2S	4.46
PF00578	AhpC-TSA	2.68
PF14588	YjgF_endoribonc	1.79
PF13193	AMP-binding_C	1.79
PF13545	HTH_Crp_2	0.89
PF02844	GARS_N	0.89
PF11958	DUF3472	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	13.39
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.89
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.89 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.89 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.07 %
Unclassified	root	N/A	48.21 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	0.89 %
Unclassified	root	N/A	48.21 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	26.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium BACL2 MAG-120920-bin34	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	20.54 %
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	0.89 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium BACL2 MAG-120920-bin34	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	20.54 %
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	0.89 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium BACL2 MAG-120920-bin34	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	20.54 %
Actinobacteria bacterium IMCC19121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium IMCC19121	0.89 %
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	4.46 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Sporichthya polymorpha	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	0.89 %
Unclassified	root	N/A	48.21 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000268\|M3P_10050461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300000756\|JGI12421J11937_10014159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3021	Open in IMG/M
3300002447\|JGI24768J34885_10040769	Not Available	1544	Open in IMG/M
3300003277\|JGI25908J49247_10007930	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300003394\|JGI25907J50239_1079467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300003395\|JGI25917J50250_1032840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1142	Open in IMG/M
3300003413\|JGI25922J50271_10106622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium BACL2 MAG-120920-bin34	593	Open in IMG/M
3300003429\|JGI25914J50564_10006159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3936	Open in IMG/M
3300003431\|JGI25913J50563_1014115	Not Available	1349	Open in IMG/M
3300003490\|JGI25926J51410_1051300	Not Available	713	Open in IMG/M

Showing 1 to 10 of 112 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	69.64%
Marine	Environmental → Aquatic → Marine	30.36%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	4.46%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	25.00%
Lake	Environmental → Aquatic → Freshwater → Lake	35.71%
Lentic	Environmental → Aquatic → Freshwater → Lentic	17.86%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.57%
River	Environmental → Aquatic → Freshwater → River	8.04%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	25.00%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.71%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	16.96%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.68%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	25.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.89%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.04%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	8.04%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.36%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.57%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	19.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	13.39%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.68%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.68%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	0.89%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000268	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters ver2	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M

Showing 1 to 10 of 99 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
M3P_100504612	3300000268	Lotic	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPLFGASSSQLILQKSITAVSVDNNA*
JGI12421J11937_100141593	3300000756	Freshwater And Sediment	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
JGI24768J34885_100407691	3300002447	Freshwater And Sediment	HMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
JGI25908J49247_100079302	3300003277	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
JGI25907J50239_10794671	3300003394	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
JGI25917J50250_10328402	3300003395	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
JGI25922J50271_101066222	3300003413	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL*
JGI25914J50564_100061595	3300003429	Freshwater Lake	AQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
JGI25913J50563_10141151	3300003431	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLILKKSTTALAVDNNG*
JGI25926J51410_10513002	3300003490	Freshwater Lake	QKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0070374_105213842	3300005517	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL*
Ga0049081_100208031	3300005581	Freshwater Lentic	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0049080_100292722	3300005582	Freshwater Lentic	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0049082_102543771	3300005584	Freshwater Lentic	HMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0075464_100794552	3300006805	Aqueous	MAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL*
Ga0075459_10433842	3300006863	Aqueous	MAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0102875_12234752	3300007547	Estuarine	LFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0102877_11626961	3300007548	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
Ga0102880_11038991	3300007550	Estuarine	MAQKDPPRGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0102917_11363472	3300007590	Estuarine	AHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV*
Ga0102918_10476031	3300007593	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA*
Ga0102919_11005291	3300007597	Estuarine	KDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV*
Ga0102923_11325831	3300007606	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVT
Ga0102897_11186962	3300007617	Estuarine	AQKVPPHGVTEGLFLCQLTVLRALAKNLDRAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0102872_11285822	3300007621	Estuarine	MAQKDPPHGVAEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA*
Ga0102878_10306952	3300007624	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIISPLFGAL
Ga0102894_10359062	3300007632	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSI
Ga0102901_11789452	3300007634	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0102901_12195821	3300007634	Estuarine	MAQKDPPQGVTKGLFLYQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIISPLFGAL
Ga0102906_10529411	3300007637	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0102902_11785251	3300007644	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV*
Ga0102902_12201352	3300007644	Estuarine	AHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0105737_11906991	3300007862	Estuary Water	MAQKDPPLGVAKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA*
Ga0105748_104255922	3300007992	Estuary Water	TFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
Ga0102893_12331242	3300008052	Estuarine	VTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKTITTLAVDNNV*
Ga0114354_10929381	3300008119	Freshwater, Plankton	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0114354_11616821	3300008119	Freshwater, Plankton	FAHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0114336_10319311	3300008261	Freshwater, Plankton	AHKAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0104242_10008382	3300008962	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0102829_10953991	3300009026	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKDLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA*
Ga0102864_11801301	3300009051	Estuarine	MAQKDPPQGVAEGLFCCQLSVCCQLSVFRAFAKNLARAATKTGLLNSLISIKMKDLSIVSPLFGALSNRLARQKSITALYVDNNAKQVASSVMSQ
Ga0114973_104950532	3300009068	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSRQLILQKSITALAVDNNG*
Ga0114980_100178546	3300009152	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSRLNLQKSIVALSVDNNA*
Ga0114980_101566212	3300009152	Freshwater Lake	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV*
Ga0114980_102252721	3300009152	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVFRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSNTALAVDNNG*
Ga0114980_107985602	3300009152	Freshwater Lake	MAQKDPPQGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0114981_100972892	3300009160	Freshwater Lake	NPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
Ga0114970_102415712	3300009163	Freshwater Lake	AHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE*
Ga0114970_103589831	3300009163	Freshwater Lake	AHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKDVSILSPLFGASSSH*
Ga0114975_100156856	3300009164	Freshwater Lake	MAQKDPPHGITEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSTISPFFGASSSQLILKKSITTLSVDNNV*
Ga0114975_100274461	3300009164	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINVKDVSILSPLFGASSSH*
Ga0114969_101977221	3300009181	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNG*
Ga0114971_106470482	3300009185	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0136236_10245752	3300010230	Freshwater	HGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSIIAVAVDNNV*
Ga0102883_11630071	3300010312	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITALAVDNNG*
Ga0139557_10009382	3300011010	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV*
Ga0151620_12027872	3300011268	Freshwater	FAHMAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL*
Ga0119951_10049272	3300012000	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFLGASSSPLLHQKSITTLAVDNNE*
Ga0119955_10457052	3300012006	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFLGASSSPLLHQKSITTLAVDNNG*
Ga0157210_10459942	3300012665	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLIL*
Ga0164292_102902262	3300013005	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPLFGASSSQLILQKSITAVSVDNNA*
Ga0187842_11911832	3300018790	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL
Ga0187843_102215562	3300019093	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE
Ga0187843_103483611	3300019093	Freshwater	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSSPLLLRKSITTLAVDNNG
Ga0211732_11468841	3300020141	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLMSSLISINMKDVSILSPLFGASSSQLLLQKSITALSVDNNA
Ga0211736_103512272	3300020151	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLLLQKSITTLSVDNNA
Ga0211729_104461302	3300020172	Freshwater	AEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSIKMKDVSILSPLFGASSSQLLLQKSITALSVDNNA
Ga0210301_13167472	3300021325	Estuarine	MAQKDPPHEVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIATLSVDNNA
Ga0222712_100221483	3300021963	Estuarine Water	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL
Ga0214917_100555552	3300022752	Freshwater	MAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFLGASSSPLLHQKSITTLAVDNNE
Ga0214917_101551111	3300022752	Freshwater	MAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL
Ga0214921_100643634	3300023174	Freshwater	RLTANPLTFAHMAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISIKMKDVSIVSPFFGASSSQLIL
Ga0244777_102118092	3300024343	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0244776_100560444	3300024348	Estuarine	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSRLALLKSITAVAVDNNV
Ga0208147_10834012	3300025635	Aqueous	PLTFAHMAQKDPPHGVTKGLFLTQLTVLRAVAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL
Ga0255106_10180342	3300027125	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATSTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0255082_10526901	3300027139	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA
Ga0255113_10660712	3300027147	Freshwater	NPLTFTHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSH
Ga0255115_10253122	3300027148	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSV
Ga0208554_10594992	3300027212	Estuarine	NPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGAL
Ga0208024_10520992	3300027222	Estuarine	PPHGATEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0208446_10952262	3300027263	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIAALSVDNN
Ga0208801_10214292	3300027367	Estuarine	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATSTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0255133_10235251	3300027368	Freshwater	GKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0255137_10049901	3300027375	Freshwater	EGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0209247_10567222	3300027468	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0255084_10601372	3300027488	Freshwater	NPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVTLSVDNNA
Ga0208682_10354412	3300027531	Estuarine	KDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIISPLFGAL
Ga0255085_11119281	3300027538	Freshwater	MAQKDPPHGATEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0209552_10167072	3300027563	Freshwater Lake	FAHMAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0209651_10460172	3300027581	Freshwater Lake	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0255119_10299772	3300027596	Freshwater	PLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSILSPLFGASSSQLNLQKSIVALSVDNNA
Ga0209357_10476031	3300027656	Freshwater Lake	QKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0209551_10186261	3300027689	Freshwater Lake	MAQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL
Ga0209087_10076064	3300027734	Freshwater Lake	MAQKDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV
Ga0209596_13239511	3300027754	Freshwater Lake	LFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE
Ga0209296_10527912	3300027759	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV
Ga0209598_103122802	3300027760	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPFFGASSRQLILQKSITSLVVDNNG
Ga0209088_100842612	3300027763	Freshwater Lake	KDPPQGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILKKSITAVAVDNNV
Ga0209088_101115771	3300027763	Freshwater Lake	MAQKDPPQGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLISINMKEVSIVSPFFGASSSPLLLQKSITTLAVDNNE
Ga0209134_100299272	3300027764	Freshwater Lake	RLTANPLTFAHVAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLILKKSTTALAVDNNG
Ga0209500_100592592	3300027782	Freshwater Lake	AQKDPPHGVTKGLFLCQLSVFRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLIL
Ga0209550_101336161	3300027892	Freshwater Lake	AHMAQKDPPHGVTKGLFLCQLSVFRALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSQLIL
Ga0209191_10166051	3300027969	Freshwater Lake	AQKDPPHGITEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSTISPFFGASSSQLILKKSITTLSVDNNV
Ga0209298_100794341	3300027973	Freshwater Lake	MAQKDPPHGVTKGLFLCQLTVFRALAKNLAKAATKTGLLSSLMSINMKDVSIVSPFFGASSSQLILQKSNTALAVDNNG
Ga0304730_11001552	3300028394	Freshwater Lake	MAQKDPPQGVTKGLFLTQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPLFGASSSQLIL
Ga0315908_113733662	3300031786	Freshwater	TVNPLTFAHMAQKDPPHGVTKGLFLCQLSVFKALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSPLLLQKSITALAVDNNG
Ga0315905_100280699	3300032092	Freshwater	MAQKDPPHGDTKGLFLCQLSVFSALAKNLAKAATKTGLLSSLMSINMKEVSIVSPFFGASSSPLLLQKAISTLAVDNNE
Ga0315905_102847812	3300032092	Freshwater	MAQKDPPHGVTKGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSIVSPFFGASSSQLILQKSITTLAVDNNV
Ga0315905_114445911	3300032092	Freshwater	TNPLTFAHMAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLISINMKDVSILSPLFGASSSQLNLQKSIAALSVDNNA
Ga0335023_0003779_2801_3001	3300034050	Freshwater	MAQKDPPQGVAEGLFRCQLSVCCQLSVFRAFAKNLARAATRTGLLNSLISIKMKDVSIVSPLFGAL
Ga0335019_0329379_358_597	3300034066	Freshwater	MAQKDPPHGVTEGLFLCQLTVLRALAKNLARAATKTGLLSSLMSINMKDVSIVSPLFGASSSQLILQKSITAVSVDNNA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083895

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences