Metagenome / Metatranscriptome Family F083894

Basic Information
Family ID	F083894
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	71 residues
Representative Sequence	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Number of Associated Samples	76
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	72.32 %
% of genes near scaffold ends (potentially truncated)	14.29 %
% of genes from short scaffolds (< 2000 bps)	68.75 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (84.821 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (45.536 % of family members)
Environment Ontology (ENVO)	Unclassified (70.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.429 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98. 1metazooDRAFT_12591232 2B570J29032_1097855202 3metazooDRAFT_14461732 4B570J40625_1004836382 5B570J40625_1005128452 6B570J40625_1013982472 7JGI25930J51415_10778632 8Ga0007787_100478211 9Ga0079957_10418035 10Ga0075464_100844992 11Ga0075464_104518782 12Ga0075464_106510632 13Ga0075464_107432182 14Ga0070748_12541322 15Ga0075458_100320471 16Ga0102822_11150421 17Ga0102828_10336493 18Ga0114363_11512142 19Ga0114880_10328502 20Ga0114880_12478931 21Ga0102831_100067622 22Ga0102814_106937201 23Ga0114977_102257824 24Ga0114978_104234142 25Ga0114970_1000221620 26Ga0114975_100182344 27Ga0114975_100884422 28Ga0114979_100813064 29Ga0114974_101144402 30Ga0114974_103109521 31Ga0114974_103763152 32Ga0114976_100494654 33Ga0129333_100943156 34Ga0153702_141420 35Ga0157598_10144881 36Ga0157609_10242512 37Ga0157611_11320932 38Ga0164293_100164783 39Ga0164293_102499173 40Ga0164293_102773282 41Ga0164293_104991442 42Ga0181352_11607712 43Ga0181344_10234312 44Ga0207193_106716510 45Ga0208050_10216862 46Ga0194048_100569953 47Ga0222712_102999812 48Ga0181351_11332442 49Ga0214921_100238664 50Ga0244775_100041882 51Ga0208916_102787332 52Ga0208916_103514302 53Ga0255099_100058621 54Ga0255079_10047543 55Ga0209296_10020273 56Ga0209296_10158054 57Ga0209296_10715583 58Ga0209296_10841361 59Ga0209296_12109762 60Ga0209088_102718972 61Ga0209668_102942212 62Ga0315293_100779453 63Ga0315285_103231022 64Ga0315294_106790701 65Ga0315274_104573934 66Ga0315289_107568802 67Ga0315284_102843303 68Ga0315295_118436592 69Ga0315286_110485171 70Ga0334978_0489741_34_243 71Ga0334982_0061043_775_987 72Ga0334982_0076202_387_635 73Ga0334982_0271522_3_188 74Ga0334982_0310203_43_252 75Ga0334982_0495733_166_375 76Ga0334994_0073534_490_702 77Ga0334994_0152503_543_767 78Ga0334994_0286374_301_549 79Ga0334979_0002579_936_1163 80Ga0334979_0012407_555_764 81Ga0334979_0014214_4218_4466 82Ga0334979_0270421_615_863 83Ga0334979_0381084_405_617 84Ga0334979_0409333_133_357 85Ga0334986_0060686_945_1193 86Ga0334986_0095132_5_214 87Ga0334986_0204593_2_178 88Ga0334985_0002249_14037_14240 89Ga0334987_0233280_206_454 90Ga0335019_0320066_439_645 91Ga0335019_0719364_374_571 92Ga0335020_0018065_2870_3082 93Ga0335010_0208130_1_219 94Ga0335012_0051792_1216_1425 95Ga0335027_0148883_205_429 96Ga0335031_0040186_2175_2381 97Ga0335031_0059811_2252_2464 98Ga0335036_0558016_390_599 99Ga0335050_0157173_946_1155 100Ga0335051_0416375_287_511 101Ga0335063_0461030_34_246 102Ga0335063_0477578_151_360 103Ga0335066_0128695_1131_1379 104Ga0335066_0240381_361_573 105Ga0335054_0295009_100_312 106Ga0335056_0079071_425_634 107Ga0335060_0065884_1395_1604 108Ga0335065_0293467_272_478 109Ga0335007_0002187_4601_4813 110Ga0335007_0002582_12851_13099 111Ga0335007_0046624_1730_1942 112Ga0335039_0107516_573_782
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98. 1metazooDRAFT_12591232 2B570J40625_1013982472 3JGI25930J51415_10778632 4Ga0114363_11512142 5Ga0114880_10328502 6Ga0114974_103109521 7Ga0129333_100943156 8Ga0164293_104991442 9Ga0194048_100569953 10Ga0315294_106790701 11Ga0315284_102843303
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98. 1metazooDRAFT_12591232 2B570J40625_1013982472 3JGI25930J51415_10778632 4Ga0114363_11512142 5Ga0114880_10328502 6Ga0114974_103109521 7Ga0129333_100943156 8Ga0164293_104991442 9Ga0194048_100569953 10Ga0315294_106790701 11Ga0315284_102843303
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.57% β-sheet: 0.00% Coil/Unstructured: 30.43%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF08774	VRR_NUC	50.89
PF01464	SLT	9.82
PF04586	Peptidase_S78	3.57
PF04860	Phage_portal	2.68

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	3.57

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	3.57 %
Unclassified	root	N/A	0.00 %
Viruses	superkingdom	All Organisms → Viruses	96.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.57 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	84.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	84.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Unclassified	root	N/A	0.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	84.82 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	84.82 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	84.82 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.61 %
Unclassified	root	N/A	0.00 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	84.82 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002202\|metazooDRAFT_1259123	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	676	Open in IMG/M
3300002408\|B570J29032_109785520	All Organisms → Viruses → Predicted Viral	1317	Open in IMG/M
3300002471\|metazooDRAFT_1446173	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	601	Open in IMG/M
3300002835\|B570J40625_100483638	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300002835\|B570J40625_100512845	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300002835\|B570J40625_101398247	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300003499\|JGI25930J51415_1077863	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	552	Open in IMG/M
3300004240\|Ga0007787_10047821	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1904	Open in IMG/M
3300005805\|Ga0079957_1041803	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2899	Open in IMG/M
3300006805\|Ga0075464_10084499	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1806	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.61%
Marine	Environmental → Aquatic → Marine	13.39%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	8.04%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.57%
Lake	Environmental → Aquatic → Freshwater → Lake	72.32%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.61%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.89%
River	Environmental → Aquatic → Freshwater → River	1.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.79%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.36%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.04%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	64.29%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.89%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.14%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.57%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	45.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.57%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.29%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	4.46%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.79%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.89%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.89%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.89%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	1.79%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.14%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002202	Freshwater microbial communities from San Paulo Zoo lake, Brazil - SEP 2012	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002471	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAY 2013	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 76 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
metazooDRAFT_12591232	3300002202	Lake	MIFEAEQNGATPIEIVDYLRGVIDTLRAEKALLEKRCEQLEASRETWQNLAAALEWLADNKRIVPADEK*
B570J29032_1097855202	3300002408	Freshwater	MSAFDDKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
metazooDRAFT_14461732	3300002471	Lake	MTFEAEQNGATPIEIVDYLRGVIDTLRAEKALLEKRCEQLEASRETWQKLAAAWEWLADNKRIVPADEK*
B570J40625_1004836382	3300002835	Freshwater	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEDFQD
B570J40625_1005128452	3300002835	Freshwater	MSAFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
B570J40625_1013982472	3300002835	Freshwater	LGNCACSDVAKQKMTFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLETSRETWKKLAQAWEWLADNKRIVPADEA*
JGI25930J51415_10778632	3300003499	Freshwater Lake	MNPFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYADLEASRETWRKLAQAWEWLAENKR
Ga0007787_100478211	3300004240	Freshwater Lake	MNPFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYADLEASRETWRKLAQAWEWLAENKRIVPNND*
Ga0079957_10418035	3300005805	Lake	MSAFDEKETGTTPVEIVDYLRGVIDTLRAEKALLEKRCETLEASRETWQKLAAAWEWLAENRD*
Ga0075464_100844992	3300006805	Aqueous	MTFDEKQTGATSIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA*
Ga0075464_104518782	3300006805	Aqueous	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWRKLAQAWEWLAENERIVPNND*
Ga0075464_106510632	3300006805	Aqueous	MTFDEKQTAATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
Ga0075464_107432182	3300006805	Aqueous	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAAAWEWLADNKRIVPADED*
Ga0070748_12541322	3300006920	Aqueous	YERQEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA*
Ga0075458_100320471	3300007363	Aqueous	EMTFEAEPQGATPIEIVDYLRGVIDTLRAEKALLEKRCETLEASRETWQKLAAAWEWLADNKRIVPADEN*
Ga0102822_11150421	3300007558	Estuarine	RQEMTFDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADES*
Ga0102828_10336493	3300007559	Estuarine	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADES*
Ga0114363_11512142	3300008266	Freshwater, Plankton	LANRFNDDEAGQMSAFDEKQNGATPVEIADYLRGVIDTLRAEKALLEKRCETLEASRDTWQKLAAAWEWLAENKD*
Ga0114880_10328502	3300008450	Freshwater Lake	MTFDEQTGAGPIEIVSYLRAEIETLRAEKALLEKRCQTLEASRETWQKLAQAWEWLADNKRIVPAND*
Ga0114880_12478931	3300008450	Freshwater Lake	MSAFDDKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
Ga0102831_100067622	3300008996	Estuarine	MGNSACLHERQEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADES*
Ga0102814_106937201	3300009079	Estuarine	GATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADES*
Ga0114977_102257824	3300009158	Freshwater Lake	MTSDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADE
Ga0114978_104234142	3300009159	Freshwater Lake	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKIIVPAEE*
Ga0114970_1000221620	3300009163	Freshwater Lake	MTFDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADE*
Ga0114975_100182344	3300009164	Freshwater Lake	MTSDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAAAWEWLADNKRIVPADET*
Ga0114975_100884422	3300009164	Freshwater Lake	MTFDEKQTGATSVEIVDYLRGVIDILRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADE*
Ga0114979_100813064	3300009180	Freshwater Lake	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKIIVPADE*
Ga0114974_101144402	3300009183	Freshwater Lake	MSAFDDKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA*
Ga0114974_103109521	3300009183	Freshwater Lake	MGNIACLYERQKMSAFDEKQNGATPIEIVDYLRSVIDTLRAEKALLEKRYEALEASRETWQKLAAAWEWLADNKRIVPANED*
Ga0114974_103763152	3300009183	Freshwater Lake	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA*
Ga0114976_100494654	3300009184	Freshwater Lake	MTSDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADET*
Ga0129333_100943156	3300010354	Freshwater To Marine Saline Gradient	MTFDEQQFGTGPTEIIEYLRATIRTLRAEKELLEKRCETLEASRETWQKLAAAWEWLAENRD*
Ga0153702_141420	3300011337	Freshwater	MSVFDEKQNGATPVELVDYLRGVIDTLRAEKALLEKRCETLEASRETWQKLAAAWEWLAENRD*
Ga0157598_10144881	3300012712	Freshwater	NYVAGKEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
Ga0157609_10242512	3300012717	Freshwater	EKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
Ga0157611_11320932	3300012724	Freshwater	MTFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
Ga0164293_100164783	3300013004	Freshwater	VSAFDEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLARAWEWLADNKRIVPADEA*
Ga0164293_102499173	3300013004	Freshwater	MTFDEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNQRIVPADEV*
Ga0164293_102773282	3300013004	Freshwater	VAGKEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED*
Ga0164293_104991442	3300013004	Freshwater	MSAFDDKQTGATPIEIVDYLRGVIDTLRAEKALLEKRNKDLEASRETWQKLAKAWEWLAKNKKIVPLMKIDSKISE
Ga0181352_11607712	3300017747	Freshwater Lake	MSAFDEKQEGATPVEIVDYLRGVIDTLRAEKALLEKRYRDLEASRETWQKLARAWEWLADNKRIVPADED
Ga0181344_10234312	3300017754	Freshwater Lake	MTFDEKQIGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADSKRIVPADEA
Ga0207193_106716510	3300020048	Freshwater Lake Sediment	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLSQAWEWLADNKRIVPVDEA
Ga0208050_10216862	3300020498	Freshwater	MSAFDDKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0194048_100569953	3300021519	Anoxic Zone Freshwater	MADRHHHLGKQEQMSAFDEKQNGATPIEIVEYLRGVIDTLRAEKALLEKQNANLEASRETWQKLAAAWEWLAENKRIVPADES
Ga0222712_102999812	3300021963	Estuarine Water	MTFDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADE
Ga0181351_11332442	3300022407	Freshwater Lake	MSAFDEKETGATPIEIVEYLRGVIDTLRAEKALLEKRYKELEASRETWQKLAKAWEWLADNKPIVPADES
Ga0214921_100238664	3300023174	Freshwater	MSAFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKELEASRETWQKLAAAWEWLADNKRIVPADED
Ga0244775_100041882	3300024346	Estuarine	MGNSACLHERQEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADES
Ga0208916_102787332	3300025896	Aqueous	MTFDEKQTGATSIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0208916_103514302	3300025896	Aqueous	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWRKLAQAWEWLAENERIVPNND
Ga0255099_100058621	3300027128	Freshwater	MSAFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRCQALEESRETWQKLAAAWEWLAENRD
Ga0255079_10047543	3300027601	Freshwater	MSAFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAAAWEWLADNKRIVPADED
Ga0209296_10020273	3300027759	Freshwater Lake	MYGHLGNPSCLHERQEMSAFDEKQNGATSVEIVDYLRGVIDTLRAEKALLEKRYEALEASRETWQKLAAAWEWLADNKRIVPADEV
Ga0209296_10158054	3300027759	Freshwater Lake	MTSDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAAAWEWLADNKRIVPADET
Ga0209296_10715583	3300027759	Freshwater Lake	MSAFDDKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0209296_10841361	3300027759	Freshwater Lake	MTFDEKQTGATPVEIVDCLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0209296_12109762	3300027759	Freshwater Lake	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0209088_102718972	3300027763	Freshwater Lake	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKIIVPADE
Ga0209668_102942212	3300027899	Freshwater Lake Sediment	MTFDEKQNGATPIEIVDYLRGVIDTLRAEKALLEKRCETLEASRETWQKLAAAWEWLAENRD
Ga0315293_100779453	3300031746	Sediment	MIFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQAWEWLADNKRIVPADEV
Ga0315285_103231022	3300031885	Sediment	MSAFDEKQNGATPIEIVNYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQAWEWLADNKRIVPDNGNA
Ga0315294_106790701	3300031952	Sediment	EIVNYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQAWEWLADNKRMVPDNGDA
Ga0315274_104573934	3300031999	Sediment	MIFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQTWEWLADNKRIVPADEV
Ga0315289_107568802	3300032046	Sediment	MSAFDEKQNGATPIEIVNYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQAWEWLAD
Ga0315284_102843303	3300032053	Sediment	LHGCLANRFSDDEAGQMSAFDEKQNGATPIEIVDYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQAWEWLADNKRMVPDNGDA
Ga0315295_118436592	3300032156	Sediment	MSAFDEKQNGATPIEIVDYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQAWEWLADNKRIVPDNGNA
Ga0315286_110485171	3300032342	Sediment	MSAFDEKQNGATPIEIVDYLRGVIDTLRAEKALLEKRYEDLEASRETWRKLAQAWEWLADNKRIVPADEV
Ga0334978_0489741_34_243	3300033979	Freshwater	MTFDEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEV
Ga0334982_0061043_775_987	3300033981	Freshwater	VSAFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKQYADLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0334982_0076202_387_635	3300033981	Freshwater	LGNNFSNYVAGKEMTFDEKQTGATPIEIVDYLRSVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0334982_0271522_3_188	3300033981	Freshwater	GATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADE
Ga0334982_0310203_43_252	3300033981	Freshwater	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVSADED
Ga0334982_0495733_166_375	3300033981	Freshwater	MTFDEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0334994_0073534_490_702	3300033993	Freshwater	MSAFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0334994_0152503_543_767	3300033993	Freshwater	VAGQEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0334994_0286374_301_549	3300033993	Freshwater	LGNCACSDVAKQKMTFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLETSRETWKKLAQAWEWLADNKRIVPADEA
Ga0334979_0002579_936_1163	3300033996	Freshwater	MSAFDEKQNGATPVEIVDYLRGVIDTLRAEKALLEKRCETLEASRETWQKLAAAWEWLADNKRIVPADGIVPNND
Ga0334979_0012407_555_764	3300033996	Freshwater	MTFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0334979_0014214_4218_4466	3300033996	Freshwater	LGNCACNDVAGKEMTFNEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0334979_0270421_615_863	3300033996	Freshwater	LGNNFSNYVAGKEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0334979_0381084_405_617	3300033996	Freshwater	VSAFDEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLARAWEWLADNKRIVPADEA
Ga0334979_0409333_133_357	3300033996	Freshwater	VAGKEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0334986_0060686_945_1193	3300034012	Freshwater	LGNCACNDVARQKMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0334986_0095132_5_214	3300034012	Freshwater	MTFEAEQQGATPIEIVDYLRGVIDTLRAEKALLEKRCETLEASRETWQKLAAAWEWLADNKRIVPADEN
Ga0334986_0204593_2_178	3300034012	Freshwater	MTFDEKQIGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWRKLAQAWEWLAD
Ga0334985_0002249_14037_14240	3300034018	Freshwater	MTFDEQTGAGPIEIVSYLRAEIETLRAEKALLEKRCETLEASRETWQKLAQAWEWLADNKRIVPAND
Ga0334987_0233280_206_454	3300034061	Freshwater	LGNNFSNYVAGKEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0335019_0320066_439_645	3300034066	Freshwater	MTFDEQEFGTSPTEIIAFLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADE
Ga0335019_0719364_374_571	3300034066	Freshwater	MTFDEKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPA
Ga0335020_0018065_2870_3082	3300034082	Freshwater	VSAFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0335010_0208130_1_219	3300034092	Freshwater	LGNCACSDVAKQKMTFDEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLETSRETWKKLAQAWEWLADN
Ga0335012_0051792_1216_1425	3300034093	Freshwater	MTLNEKQTGATPIEIVEYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335027_0148883_205_429	3300034101	Freshwater	VAGKEMTFDEKQTGATPIEIVDYLRSVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335031_0040186_2175_2381	3300034104	Freshwater	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADE
Ga0335031_0059811_2252_2464	3300034104	Freshwater	MSAFNDKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335036_0558016_390_599	3300034106	Freshwater	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPVDED
Ga0335050_0157173_946_1155	3300034108	Freshwater	MTLNEKQTGATPIEIVEYLRGVIDTLRAEKALLKKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335051_0416375_287_511	3300034109	Freshwater	VAGKEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335063_0461030_34_246	3300034111	Freshwater	MSAFDEKQTGATPIEIVEYLRGVIDTLRAEKTLLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335063_0477578_151_360	3300034111	Freshwater	MTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVSADEA
Ga0335066_0128695_1131_1379	3300034112	Freshwater	LGNRACHDVARQEMTFDEKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335066_0240381_361_573	3300034112	Freshwater	MSAFDDKQTGATPIEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPANED
Ga0335054_0295009_100_312	3300034119	Freshwater	MSAFDDKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADED
Ga0335056_0079071_425_634	3300034120	Freshwater	MTFDEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWKKLAQAWEWLADNKRIVPADEA
Ga0335060_0065884_1395_1604	3300034122	Freshwater	MTFDEKQIGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0335065_0293467_272_478	3300034200	Freshwater	MIFDEKQTGATSVEIVDYLRGIIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADE
Ga0335007_0002187_4601_4813	3300034283	Freshwater	VSAFDEKQIGATPIEIVDYLRGVIDTLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0335007_0002582_12851_13099	3300034283	Freshwater	MGNDFSNHVAGEEMTFDEKQTGATPIEIIDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0335007_0046624_1730_1942	3300034283	Freshwater	MSAFDDKQTGATPVEIVDYLRGVIDTLRAEKALLEKRYKDLEASRETWQKLAQAWEWLADNKRIVPADEA
Ga0335039_0107516_573_782	3300034355	Freshwater	MTFDEKQNGATPIEIIDYLRGVIETLRAEKALLEKRYADLEASRETWQKLAQAWEWLADNKRIVPADEA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083894

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences