Basic Information | |
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Family ID | F083878 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 112 |
Average Sequence Length | 42 residues |
Representative Sequence | MLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY |
Number of Associated Samples | 70 |
Number of Associated Scaffolds | 112 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Viruses |
% of genes with valid RBS motifs | 7.14 % |
% of genes near scaffold ends (potentially truncated) | 33.93 % |
% of genes from short scaffolds (< 2000 bps) | 66.07 % |
Associated GOLD sequencing projects | 57 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.48 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Predicted Viral (45.536 % of family members) |
NCBI Taxonomy ID | 10239 (predicted) |
Taxonomy | All Organisms → Viruses → Predicted Viral |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (41.071 % of family members) |
Environment Ontology (ENVO) | Unclassified (49.107 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (83.929 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 43.06% β-sheet: 0.00% Coil/Unstructured: 56.94% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.48 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Lake Freshwater Freshwater Marine Marine Plankton Marine Sediment Aqueous Seawater Freshwater To Marine Saline Gradient Salt Marsh Wetland Estuarine Water Marine Pond Water Sediment Marine Methane Seep Sediment Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSpr2010_1000073736 | 3300000116 | Marine | MLKYIIARLRWGKLSQEDKEILKTMPVSQVFSRPYLNPKLYTQY* |
DelMOSpr2010_102647011 | 3300000116 | Marine | WGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW* |
JGIcombinedJ13530_1066880052 | 3300001213 | Wetland | MLKYILAYIRWGDLTPEQENKLETLSLKEVLNTPYLI |
ACM40_10309021 | 3300001830 | Marine Plankton | LARLRWGSLSPEQKEQLKTLPFRQVFFRPYLSPKLHKNYEKTLYS* |
Ga0079957_10855884 | 3300005805 | Lake | MLKYILAYIRWGDLTPEQENKLETLSLKEVLNTPYLIRKY* |
Ga0079957_12416974 | 3300005805 | Lake | ALARLRWGSLSPEQKEKLKLLSFRDVLKTPYLIRRF* |
Ga0075474_100173724 | 3300006025 | Aqueous | MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIRKYYG* |
Ga0075478_102186742 | 3300006026 | Aqueous | MLKYILARLRWGSLSPEQKEKLKTLSIKEVFNSPYLIRKYYG* |
Ga0070754_1000974014 | 3300006810 | Aqueous | MVKYIFAQIRWGSLSPEQKEKVKALSFKELFSIPYLTPKFYINY* |
Ga0070754_101382223 | 3300006810 | Aqueous | MLKYILARLRWGSLSLQQKEILKDMSFIQVFKRPYLDPKLVKHY* |
Ga0070754_101521904 | 3300006810 | Aqueous | MLKKIIATLRWGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW* |
Ga0070754_101567021 | 3300006810 | Aqueous | MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLHKHY* |
Ga0075481_102188892 | 3300006868 | Aqueous | MLKYILARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY* |
Ga0075477_103148801 | 3300006869 | Aqueous | HIMLKYILARLRWGSLSPEQKEKLKTLSIKEVFNSPYLIRKYYG* |
Ga0075479_101724441 | 3300006870 | Aqueous | YILARLRWGSLSPEQKEKLKTLSFLEVFTLPYLVPKLYKHY* |
Ga0075479_103824532 | 3300006870 | Aqueous | MLKNFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY* |
Ga0075475_100188227 | 3300006874 | Aqueous | MLKNILATLRWGSLSPEQKEELKTMSLRQVLNRPYLAPKLHKHY* |
Ga0070750_102330811 | 3300006916 | Aqueous | LKKIIATLRWGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW* |
Ga0070750_104340472 | 3300006916 | Aqueous | MLKNIIAFLRWGNLNKEQKEELKSLSIKEVFGRPYLAPKLHKHY* |
Ga0099851_100017343 | 3300007538 | Aqueous | MLKKIIATLRWGKLSKEQKEELKTLTLKQVFSRPYLAPKLYHHW* |
Ga0099851_100998811 | 3300007538 | Aqueous | MLKYILASLRWGNLSNEEREVLKTLPLSQVLKRPYLAPKLQKHC* |
Ga0099851_10178407 | 3300007538 | Aqueous | MLKYIFARLRWGSLSPEQKEKLKTLSLKEVFDTPYLIRKY* |
Ga0099851_12690313 | 3300007538 | Aqueous | RHTLLKMLKNILARLRWGSLSPQQKEQLETISLGQVIKRPYLCPKLHKHY* |
Ga0099849_10788111 | 3300007539 | Aqueous | LLKMLKNFLARLRWGSLSPEQKEELQTLPISAVFTRPYLAPKLYKHY* |
Ga0099848_10096574 | 3300007541 | Aqueous | MKYFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY* |
Ga0099848_10105134 | 3300007541 | Aqueous | MLKYFLAEIRWGSLSPEQKEELKTLPLSEVFKRPYLAPKLQKHY* |
Ga0099850_11217274 | 3300007960 | Aqueous | MLKNIIAFLRWGNLNKEQKEELKTLSIREVFGRPYLAPKLHKHY* |
Ga0102960_10115255 | 3300009000 | Pond Water | MLKTIIAMLRWGNLSPEQKQKLETLSLKEVLNTPYLIRKY* |
Ga0102960_101549612 | 3300009000 | Pond Water | MLKYIIARLRWGSLSPEHKERLKTLSLKEVFNTPYLIRKY* |
Ga0102963_10124268 | 3300009001 | Pond Water | MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNAPYLIRKY* |
Ga0102963_10193532 | 3300009001 | Pond Water | MLKYIIARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY* |
Ga0118687_100032597 | 3300009124 | Sediment | MLKNLLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY* |
Ga0118687_100382851 | 3300009124 | Sediment | YIIARLRWGSLSPEHKERLKTLSLKEVFDTPYLIRKY* |
Ga0129348_10068844 | 3300010296 | Freshwater To Marine Saline Gradient | MKYFLARLRWGSLSPEQKEQLKTLPLSAVFTRPYLAPKLYKHY* |
Ga0129348_10423153 | 3300010296 | Freshwater To Marine Saline Gradient | MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLYKHY* |
Ga0129348_10848003 | 3300010296 | Freshwater To Marine Saline Gradient | MLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY* |
Ga0129348_11219552 | 3300010296 | Freshwater To Marine Saline Gradient | MKYIFARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY* |
Ga0129345_10080643 | 3300010297 | Freshwater To Marine Saline Gradient | MFKNFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY* |
Ga0129345_10624454 | 3300010297 | Freshwater To Marine Saline Gradient | MIKNILASIRWGSLSPEQKEELKTMPLLEVFTRPYLIPKLHKHY* |
Ga0129345_13431662 | 3300010297 | Freshwater To Marine Saline Gradient | MLKNLLARLRWGSLSPEQKEELKTLSFRQVLNRPYLR |
Ga0129342_10426314 | 3300010299 | Freshwater To Marine Saline Gradient | YMIKKFLARLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY* |
Ga0129342_10498951 | 3300010299 | Freshwater To Marine Saline Gradient | MLKQLLAHLRWGSLTLEQKEELKTLSFKEVFTRPYLDPKLHKHY |
Ga0129342_10649131 | 3300010299 | Freshwater To Marine Saline Gradient | LARLRWGSLTLEQKEELKTLSFKEVFTRPYLDPKLHKHY* |
Ga0129342_11739343 | 3300010299 | Freshwater To Marine Saline Gradient | MLKNILARLRWGSLSPEQKEELKTMSLKQVFSRPYLVPKLH |
Ga0129351_10416632 | 3300010300 | Freshwater To Marine Saline Gradient | MLKSILASLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY* |
Ga0136656_100044225 | 3300010318 | Freshwater To Marine Saline Gradient | MIKNILASIRWGSLSPEQKEELKTMPLSEVFTRPYLIPKLHKHY* |
Ga0129333_102865535 | 3300010354 | Freshwater To Marine Saline Gradient | MFKNIISYLRWGSLSSEQKEKLKSLSLKKVFTTPYLIRRY* |
Ga0129333_103558034 | 3300010354 | Freshwater To Marine Saline Gradient | MLKYFLAEIRWGSLSPEQKEELKTLSLSEVFKRPYLTPKLQKHY* |
Ga0129333_112073801 | 3300010354 | Freshwater To Marine Saline Gradient | MLKNLLAELRWGPLTPEQQKELDTLPIKEVLRRPYL |
Ga0136549_100111128 | 3300010389 | Marine Methane Seep Sediment | MLKLIFARLRWGKLSQEQKEELKTLSLGQTLARPYLVPKLFKHY* |
Ga0151620_10063046 | 3300011268 | Freshwater | MFKYILAYIRWGDLTPEQENKLETLSLKEVLNTPYLIRRY* |
Ga0151620_10083587 | 3300011268 | Freshwater | MPAKMFKYILARLRWGSLSLQQKEKLQSLSFKEVLNVPYLIRKY* |
Ga0129347_10190753 | 3300012504 | Aqueous | MKYFLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHK |
Ga0129347_10691331 | 3300012504 | Aqueous | MIKNILASIRWGSLSPEQKEELKTMPLSEVFTRPYLIPK |
Ga0129344_10240852 | 3300012520 | Aqueous | MFKNFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLYKHY* |
Ga0129344_12572121 | 3300012520 | Aqueous | MLKNLLARLRWGSLSPEQKEELKTMSLRQVLNRPYLCPKLHTHY* |
Ga0129352_104418801 | 3300012528 | Aqueous | RWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY* |
Ga0129346_10601744 | 3300012965 | Aqueous | MLKNLLARLRWGSLSPEQKEELKTLSFRQVLNRTYL |
Ga0129341_10821644 | 3300012966 | Aqueous | KKIIATLRWGKLSKEQKEELKTHTLKQVLSRPYLAPKLYHHW* |
Ga0129343_10362286 | 3300012967 | Aqueous | MKYFLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY* |
Ga0129343_11147363 | 3300012967 | Aqueous | MIKKFLARLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY* |
Ga0129343_11645352 | 3300012967 | Aqueous | MLKQLLAHLRWGSLTLEQKEELKTLSFKEVFTRPYLDPKLHKHY* |
Ga0181584_102186122 | 3300017949 | Salt Marsh | MLKKIIATLRWGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW |
Ga0181584_103090584 | 3300017949 | Salt Marsh | MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLHKHY |
Ga0181584_104549332 | 3300017949 | Salt Marsh | MFKNFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY |
Ga0181583_101021271 | 3300017952 | Salt Marsh | MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKL |
Ga0181583_104733292 | 3300017952 | Salt Marsh | MLKNIIASLRWGKLNQEEKDELKKISLKEVLDRPYLVPKLHKHY |
Ga0181583_108388951 | 3300017952 | Salt Marsh | MFKNFLARLRWGSLSPKQKEELKTLPLSAVFSRPYLAPK |
Ga0181580_100747085 | 3300017956 | Salt Marsh | MLKNFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY |
Ga0181582_1007795211 | 3300017958 | Salt Marsh | MIKYILARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY |
Ga0181581_104963313 | 3300017962 | Salt Marsh | MLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY |
Ga0181589_104854403 | 3300017964 | Salt Marsh | MKYFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY |
Ga0181589_109380321 | 3300017964 | Salt Marsh | LKKFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY |
Ga0181590_100618564 | 3300017967 | Salt Marsh | MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNATYLIRKY |
Ga0181592_101387624 | 3300018421 | Salt Marsh | MLKVLIAKLRWGKLSPEQKQKLEILSLKEVFNATYLIRKY |
Ga0213867_10484424 | 3300021335 | Seawater | MLKYIIARLRWGKLSQEDKEILKTMPVSQVFSRPYLNPKLYTQY |
Ga0213866_1002298215 | 3300021425 | Seawater | MIKYLLAFIRWGSLSPEQKEKVKALSLKELFSTPYLTPKLYINY |
Ga0222718_100979103 | 3300021958 | Estuarine Water | MLKYIIARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY |
Ga0222716_100262577 | 3300021959 | Estuarine Water | MLKNIIASLRWGKLNNEQKEELKKLSFKQVLGRPYLVPKLHKHYE |
Ga0222716_100427302 | 3300021959 | Estuarine Water | MLKNILARLRWGSLSPEQKEELKTMSLKQVFSRPYLVPKLHKHYEKTLYS |
Ga0222716_100746593 | 3300021959 | Estuarine Water | MKYILARLRWGSLSPEQKEKLKTMSFAEVFNRPYLTPKLHKHY |
Ga0222715_1000403616 | 3300021960 | Estuarine Water | MPAKMFKYILARLRWGSLSLQQKEKLQSLSFKEVLNVPYLIRKY |
Ga0222715_100524961 | 3300021960 | Estuarine Water | NFFARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY |
Ga0222715_102463582 | 3300021960 | Estuarine Water | MLKNLLAELRWGPLTPEQQKELDTLPIKEVLRRPYLAPKLHKHY |
Ga0222714_1000051223 | 3300021961 | Estuarine Water | MLKYILAYIRWGDLTSAQEDKLETLSLKEVLLTPYLIRKY |
Ga0222714_100293462 | 3300021961 | Estuarine Water | MLKNFFARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY |
Ga0222719_102474933 | 3300021964 | Estuarine Water | MLKNLLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY |
Ga0212025_10298214 | 3300022057 | Aqueous | MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIRN |
Ga0212026_10565601 | 3300022069 | Aqueous | MVKYILAEIRWGSLSPQQKEKLSTLSLVETLRSPYL |
Ga0212028_10677652 | 3300022071 | Aqueous | MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIRKYYG |
Ga0196899_10419322 | 3300022187 | Aqueous | MLKYILARLRWGSLSPEQKEKLKTLSIKEVFNSPYLIRKYYG |
Ga0196899_11000342 | 3300022187 | Aqueous | MLKKIIATLRWGKLSKEQKEELKTLTLKQVFSRPYLAPKLYHHW |
Ga0196905_100374912 | 3300022198 | Aqueous | MLKYILASLRWGNLSNEEREVLKTLPLSQVLKRPYLAPKLQKHC |
Ga0196901_10588123 | 3300022200 | Aqueous | MLKYFLAEIRWGSLSPEQKEELKTLPLSEVFKRPYLTPKLQKHY |
Ga0255780_100100601 | 3300022935 | Salt Marsh | RLMLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLHKHY |
Ga0255770_1004394610 | 3300022937 | Salt Marsh | KNFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY |
Ga0255751_103266873 | 3300023116 | Salt Marsh | MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNATYL |
Ga0255147_100022415 | 3300024289 | Freshwater | MLKYIFAYLRWGSLSPEQKEELKTMSFKQVFTQPYLAPKLYKHW |
Ga0255276_11657073 | 3300024570 | Freshwater | KNIHIMLKYIFAYLRWGSLSPEQKEELKTMSFKQVFTQPYLAPKLYKHW |
Ga0208161_10096374 | 3300025646 | Aqueous | MKYFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY |
Ga0208160_10236555 | 3300025647 | Aqueous | MLKYIFARLRWGSLSPEQKEKLKTLSLKEVFDTPYLIRKY |
Ga0208428_100138316 | 3300025653 | Aqueous | MVKYIFAQIRWGSLSPEQKEKVKALSFKELFSIPYLTPKFYINY |
Ga0208428_11760773 | 3300025653 | Aqueous | KYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLYKHY |
Ga0208162_10431352 | 3300025674 | Aqueous | MLKSILASLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY |
Ga0208162_10711684 | 3300025674 | Aqueous | KNMLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY |
Ga0208150_11135502 | 3300025751 | Aqueous | LARLRWGSLSPEQKEKLKTLSFLEVFTLPYLVPKLYKHY |
Ga0208785_10330345 | 3300025815 | Aqueous | MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIR |
Ga0208880_10480101 | 3300026085 | Marine | LPKMLKYFLARLRWGSLSPEQKEELKTLPLSEVFSLPYLAPKLHKHY |
Ga0209951_10138836 | 3300026138 | Pond Water | MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNAPYLIRKY |
Ga0209932_10198394 | 3300026183 | Pond Water | MLKTIIAMLRWGNLSPEQKQKLETLSLKEVLNTPYLIRKY |
Ga0209536_1012185832 | 3300027917 | Marine Sediment | MIKYFFARIRWGSLSPEQKEKVKALSFKELFSTPYLTPKLYINY |
Ga0307379_110970593 | 3300031565 | Soil | IMLKYILARLRWGSLSPEHKEKLKTLSLKEVFNTPYLIRKY |
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