Metagenome Family F083858

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083858
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	71 residues
Representative Sequence	MRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR
Number of Associated Samples	47
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.25 %
% of genes near scaffold ends (potentially truncated)	27.68 %
% of genes from short scaffolds (< 2000 bps)	75.89 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (36.607 % of family members)
Environment Ontology (ENVO)	Unclassified (70.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 90.77% β-sheet: 0.00% Coil/Unstructured: 9.23%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF02321	OEP	12.50
PF03706	LPG_synthase_TM	9.82
PF01694	Rhomboid	7.14
PF12146	Hydrolase_4	1.79
PF00672	HAMP	1.79
PF13632	Glyco_trans_2_3	1.79
PF02518	HATPase_c	1.79
PF01931	NTPase_I-T	1.79
PF09924	LPG_synthase_C	0.89
PF13520	AA_permease_2	0.89
PF13533	Biotin_lipoyl_2	0.89
PF01066	CDP-OH_P_transf	0.89
PF13641	Glyco_tranf_2_3	0.89
PF12700	HlyD_2	0.89
PF01566	Nramp	0.89
PF06057	VirJ	0.89
PF00595	PDZ	0.89
PF13360	PQQ_2	0.89
PF01435	Peptidase_M48	0.89
PF04107	GCS2	0.89
PF13180	PDZ_2	0.89
PF16576	HlyD_D23	0.89
PF12695	Abhydrolase_5	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	25.00
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	9.82
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	7.14
COG1986	Non-canonical (house-cleaning) NTP pyrophosphatase, all-alpha NTP-PPase family	Defense mechanisms [V]	1.79
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.89
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.89
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.89
COG3946	Type IV secretory pathway, VirJ component	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	6.25 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	6.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.89 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.89 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	6.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.89 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	6.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	6.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101211097	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300000559\|F14TC_102942836	Not Available	727	Open in IMG/M
3300003911\|JGI25405J52794_10105022	Not Available	632	Open in IMG/M
3300004268\|Ga0066398_10163028	Not Available	567	Open in IMG/M
3300004281\|Ga0066397_10029256	Not Available	881	Open in IMG/M
3300004281\|Ga0066397_10152780	Not Available	529	Open in IMG/M
3300004633\|Ga0066395_10380981	Not Available	790	Open in IMG/M
3300005294\|Ga0065705_10286554	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300005332\|Ga0066388_100008842	All Organisms → cellular organisms → Bacteria	7608	Open in IMG/M
3300005332\|Ga0066388_100054048	All Organisms → cellular organisms → Bacteria	4168	Open in IMG/M
3300005332\|Ga0066388_100121849	All Organisms → cellular organisms → Bacteria	3132	Open in IMG/M
3300005332\|Ga0066388_100229871	All Organisms → cellular organisms → Bacteria	2487	Open in IMG/M
3300005332\|Ga0066388_100376428	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300005332\|Ga0066388_100469923	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300005332\|Ga0066388_100538483	Not Available	1799	Open in IMG/M
3300005332\|Ga0066388_100874843	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300005332\|Ga0066388_101622978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300005332\|Ga0066388_101794333	Not Available	1090	Open in IMG/M
3300005332\|Ga0066388_102218181	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005332\|Ga0066388_102634478	Not Available	916	Open in IMG/M
3300005332\|Ga0066388_102646486	Not Available	914	Open in IMG/M
3300005332\|Ga0066388_103748556	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005332\|Ga0066388_104365100	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005332\|Ga0066388_107345226	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005441\|Ga0070700_101436311	Not Available	584	Open in IMG/M
3300005713\|Ga0066905_100021258	Not Available	3459	Open in IMG/M
3300005713\|Ga0066905_100026052	All Organisms → cellular organisms → Bacteria	3222	Open in IMG/M
3300005713\|Ga0066905_100360041	Not Available	1166	Open in IMG/M
3300005713\|Ga0066905_100412417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300005713\|Ga0066905_100982857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300005713\|Ga0066905_101000069	Not Available	737	Open in IMG/M
3300005713\|Ga0066905_101230791	Not Available	670	Open in IMG/M
3300005713\|Ga0066905_102054779	Not Available	531	Open in IMG/M
3300005764\|Ga0066903_100576836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1940	Open in IMG/M
3300005764\|Ga0066903_102131900	Not Available	1080	Open in IMG/M
3300005764\|Ga0066903_102492696	Not Available	1001	Open in IMG/M
3300005764\|Ga0066903_108075115	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005764\|Ga0066903_108154858	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005937\|Ga0081455_10032790	All Organisms → cellular organisms → Bacteria	4676	Open in IMG/M
3300005937\|Ga0081455_10116003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2119	Open in IMG/M
3300005983\|Ga0081540_1094387	Not Available	1307	Open in IMG/M
3300005983\|Ga0081540_1145806	Not Available	942	Open in IMG/M
3300006845\|Ga0075421_100038298	All Organisms → cellular organisms → Bacteria → Acidobacteria	6078	Open in IMG/M
3300006845\|Ga0075421_101023205	Not Available	933	Open in IMG/M
3300006845\|Ga0075421_101856558	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006847\|Ga0075431_100045774	All Organisms → cellular organisms → Bacteria → Acidobacteria	4510	Open in IMG/M
3300006853\|Ga0075420_101125407	Not Available	675	Open in IMG/M
3300006854\|Ga0075425_101650245	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300006854\|Ga0075425_102339272	Not Available	593	Open in IMG/M
3300006871\|Ga0075434_100517326	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300006880\|Ga0075429_101347423	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006904\|Ga0075424_100878036	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006969\|Ga0075419_10694662	Not Available	721	Open in IMG/M
3300007076\|Ga0075435_100593133	Not Available	961	Open in IMG/M
3300009100\|Ga0075418_10538785	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1254	Open in IMG/M
3300009792\|Ga0126374_10493915	Not Available	880	Open in IMG/M
3300009792\|Ga0126374_11576787	Not Available	541	Open in IMG/M
3300010043\|Ga0126380_10045508	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300010043\|Ga0126380_10631675	Not Available	849	Open in IMG/M
3300010043\|Ga0126380_11228122	Not Available	648	Open in IMG/M
3300010046\|Ga0126384_10236151	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300010046\|Ga0126384_10270798	Not Available	1382	Open in IMG/M
3300010046\|Ga0126384_10289319	Not Available	1342	Open in IMG/M
3300010046\|Ga0126384_10706266	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300010046\|Ga0126384_11106108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300010046\|Ga0126384_11670549	Not Available	601	Open in IMG/M
3300010047\|Ga0126382_10177787	Not Available	1490	Open in IMG/M
3300010047\|Ga0126382_10695185	Not Available	852	Open in IMG/M
3300010047\|Ga0126382_10765342	Not Available	819	Open in IMG/M
3300010047\|Ga0126382_10982844	Not Available	738	Open in IMG/M
3300010047\|Ga0126382_11056257	Not Available	716	Open in IMG/M
3300010047\|Ga0126382_12142724	Not Available	536	Open in IMG/M
3300010359\|Ga0126376_10682290	Not Available	985	Open in IMG/M
3300010359\|Ga0126376_12187823	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300010359\|Ga0126376_12461702	Not Available	568	Open in IMG/M
3300010360\|Ga0126372_10303274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1405	Open in IMG/M
3300010360\|Ga0126372_10540166	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300010360\|Ga0126372_10553119	Not Available	1094	Open in IMG/M
3300010360\|Ga0126372_11084358	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300010360\|Ga0126372_12942814	Not Available	528	Open in IMG/M
3300010362\|Ga0126377_10000548	All Organisms → cellular organisms → Bacteria	22995	Open in IMG/M
3300010362\|Ga0126377_10088374	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2799	Open in IMG/M
3300010362\|Ga0126377_10110404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2524	Open in IMG/M
3300010362\|Ga0126377_10214238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1854	Open in IMG/M
3300010362\|Ga0126377_10410424	Not Available	1367	Open in IMG/M
3300010362\|Ga0126377_11259350	Not Available	811	Open in IMG/M
3300010362\|Ga0126377_11935874	Not Available	665	Open in IMG/M
3300010366\|Ga0126379_10181115	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2004	Open in IMG/M
3300010376\|Ga0126381_101616912	Not Available	936	Open in IMG/M
3300010376\|Ga0126381_103743837	Not Available	595	Open in IMG/M
3300010398\|Ga0126383_10099085	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
3300010398\|Ga0126383_10152779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2156	Open in IMG/M
3300010400\|Ga0134122_12456465	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012021\|Ga0120192_10004727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1842	Open in IMG/M
3300012081\|Ga0154003_1015757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1524	Open in IMG/M
3300012204\|Ga0137374_10007078	All Organisms → cellular organisms → Bacteria	13360	Open in IMG/M
3300012355\|Ga0137369_10033717	All Organisms → cellular organisms → Bacteria → Acidobacteria	4660	Open in IMG/M
3300012948\|Ga0126375_10448926	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012971\|Ga0126369_10029245	All Organisms → cellular organisms → Bacteria	4516	Open in IMG/M
3300012971\|Ga0126369_10036470	All Organisms → cellular organisms → Bacteria	4091	Open in IMG/M
3300012971\|Ga0126369_11289274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	820	Open in IMG/M
3300015371\|Ga0132258_12322749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1345	Open in IMG/M
3300017792\|Ga0163161_11035487	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300019883\|Ga0193725_1002778	All Organisms → cellular organisms → Bacteria → Acidobacteria	5079	Open in IMG/M
3300027646\|Ga0209466_1049899	Not Available	846	Open in IMG/M
3300027874\|Ga0209465_10004976	All Organisms → cellular organisms → Bacteria	5782	Open in IMG/M
3300027874\|Ga0209465_10005448	All Organisms → cellular organisms → Bacteria → Acidobacteria	5545	Open in IMG/M
3300027909\|Ga0209382_10031169	All Organisms → cellular organisms → Bacteria → Acidobacteria	6424	Open in IMG/M
3300027909\|Ga0209382_10042102	All Organisms → cellular organisms → Bacteria → Acidobacteria	5471	Open in IMG/M
3300027909\|Ga0209382_10701029	Not Available	1089	Open in IMG/M
3300031720\|Ga0307469_10106416	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1987	Open in IMG/M
3300031740\|Ga0307468_100344302	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.57%
Host-Associated	Host-Associated	21.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.57%
Plants	Host-Associated → Plants	20.54%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.75%
Loam	Environmental → Terrestrial → Soil → Loam	34.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	32.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	36.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	32.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.29%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1012110972	3300000559	Soil	MHLNENSRFIFLTLGVFCLTLGVAILVFSLIERILFRVGFVGLFVGVSSFAIAIGILILVLVRRPAG*
F14TC_1029428363	3300000559	Soil	MRLNENSRFIILTLGVFCLMLGAAVLLFSLIERVFFDVHFVRLFVAASSVAIGFGIALLLLGRRRSV*
JGI25405J52794_101050221	3300003911	Tabebuia Heterophylla Rhizosphere	MNAXRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAISFVGLCVRLSSIAITLGAILLLFSRRR*
Ga0066398_101630281	3300004268	Tropical Forest Soil	MRLNENARFIFLTLGVFWLTLGVGVLLLSLIERAFFAMSFVGLCVELSSIAIALGAILL
Ga0066397_100292562	3300004281	Tropical Forest Soil	MRLNENARFIFLTLGVFCLTLGVGVLLLSLIERAFFAMSFVGLCVELSSIAIALGAILLLFGGWRSR*
Ga0066397_101527802	3300004281	Tropical Forest Soil	RMNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR*
Ga0066395_103809812	3300004633	Tropical Forest Soil	RRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0065705_102865542	3300005294	Switchgrass Rhizosphere	MHLNENSRFIFLTLGVFCLTLGVAILVFSLIERILFRVGFVGLFVGVSSFAIAIGILILVLVRRPT*
Ga0066388_1000088423	3300005332	Tropical Forest Soil	MRLNENAKFIFLTLGVFCLTLGVAVLLLSLIERAFFAMSFIGLVVRLSSIAIALGAILLLFGRWRSR*
Ga0066388_1000540483	3300005332	Tropical Forest Soil	MRLNENSRFISLALGVFCLTLGSAVLLFSLIEWICFAMKFVGVIIGPSSIAIAIGALLLLLGSRRQI*
Ga0066388_1001218493	3300005332	Tropical Forest Soil	MQLSENSRFISLTLGAAVLLFSLIERVCFAMKFIGLVVGLSSIAIALGALLLLLGRRGPI
Ga0066388_1002298713	3300005332	Tropical Forest Soil	VIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAITLGAILLLFSRRR*
Ga0066388_1003764282	3300005332	Tropical Forest Soil	MRLNENARFIFLTLGVFCLTLGVAVLLLSLIERAFFAMSFVGLCVGLSSIAIALGAILMLFGGWRSR*
Ga0066388_1004699232	3300005332	Tropical Forest Soil	MRLNENARFIFLTLGVFWLTLGVGVLLLSLIERAFFAMSFVGLCVELSSIAIALGAILLLFGGRRSR*
Ga0066388_1005384833	3300005332	Tropical Forest Soil	LSIRERGVVMAERETIMRLNENSRFIALTLGVFCLMLGAAALLFSLIERVFLAERFAGPVVVTSSVAIALGAFLLLLSRRKRA*
Ga0066388_1008748432	3300005332	Tropical Forest Soil	MQLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0066388_1016229781	3300005332	Tropical Forest Soil	VIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAISFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0066388_1017943331	3300005332	Tropical Forest Soil	MRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFIGLCVRLSSITITLGAILLLFSRRRSR*
Ga0066388_1022181812	3300005332	Tropical Forest Soil	MQLSENSKFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFIGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0066388_1026344781	3300005332	Tropical Forest Soil	RMNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0066388_1026464862	3300005332	Tropical Forest Soil	ENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRLKPR*
Ga0066388_1037485562	3300005332	Tropical Forest Soil	MRLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGAFLLLLGRRRPI*
Ga0066388_1043651001	3300005332	Tropical Forest Soil	MQLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGLVVGLSSIAITLGALLLLLGRRRPI*
Ga0066388_1073452261	3300005332	Tropical Forest Soil	MQLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGLVVGLSSIAIALGALLLL
Ga0070700_1014363112	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MHLNENSRFIFLTLGVFCLTLGVAILVFSLIERILFRVGFVGLFVGVSSFAIAIGILILVLVRRPTS*
Ga0066905_1000212583	3300005713	Tropical Forest Soil	VIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR*
Ga0066905_1000260523	3300005713	Tropical Forest Soil	MRLNENARFIFLTLGVFCLTLGVGVLLLSLIERAFFAMSFVGLCVELSSIAIALGAILLLFGGRRSR*
Ga0066905_1003600412	3300005713	Tropical Forest Soil	MNAKRRWGDEEVIMRLNENARFIFLTVGVFCLTLGAAVLLLSLIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRGSI*
Ga0066905_1004124172	3300005713	Tropical Forest Soil	AKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRR*
Ga0066905_1009828572	3300005713	Tropical Forest Soil	SRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVIVGLSSIAIALGALLLLLGRRRPI*
Ga0066905_1010000692	3300005713	Tropical Forest Soil	QGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0066905_1012307911	3300005713	Tropical Forest Soil	QGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAITLGAILLLFSRRR*
Ga0066905_1020547791	3300005713	Tropical Forest Soil	MRLNENAKFIFLTLGVFCLTLGVAALLLSLIERALFAMSFVGLCVGLSSIAIALGAILLLFGRWRSR*
Ga0066903_1005768361	3300005764	Tropical Forest Soil	LSIRERGVVMAERETIMRLNENSRFIALTLGVFCLMLGAAALLFSLVERVFLAEHFVGSVVVTSSIAIALGAFLLLLSRRKRV*
Ga0066903_1021319002	3300005764	Tropical Forest Soil	MQFNENSRFVFLTLGVFCLTLGAAVLLFSLIEKLFFAEGFIGLIIGLSSICIALGAIILLCCRRSSI*
Ga0066903_1024926962	3300005764	Tropical Forest Soil	MIMRLNENARFILLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCLGLSSIAIALGAILLLFSRRGSS*
Ga0066903_1080751152	3300005764	Tropical Forest Soil	LSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0066903_1081548581	3300005764	Tropical Forest Soil	SLRDEEPIMRLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIVIALGAFLLLLGRRSPI*
Ga0081455_100327902	3300005937	Tabebuia Heterophylla Rhizosphere	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAISFVGLCVRLSSIAITLGAILLLFSRRR*
Ga0081455_101160031	3300005937	Tabebuia Heterophylla Rhizosphere	MRLNENAKFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAVLLLFSRRRLR*
Ga0081540_10943871	3300005983	Tabebuia Heterophylla Rhizosphere	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAITLGAILLLFSRLR*
Ga0081540_11458062	3300005983	Tabebuia Heterophylla Rhizosphere	MRLNENARFIFLTLGVFCLTLGVAVLLLSLIERAFFAMSFVGLCVGLSSIAIALGAILLLFGGWRSR*
Ga0075421_1000382983	3300006845	Populus Rhizosphere	MQLSENSRFISLTLGLFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0075421_1010232052	3300006845	Populus Rhizosphere	AKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAITLGAILLLFSRRR*
Ga0075421_1018565582	3300006845	Populus Rhizosphere	MQLSENSRFISLTLGVFCLTLGSAVLLFSLIERVCFAMKFIGLVVGLSSIAIALGALLLLLGRRRPI*
Ga0075431_1000457741	3300006847	Populus Rhizosphere	RMNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRR*
Ga0075420_1011254071	3300006853	Populus Rhizosphere	VIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVGLSSIAIALGAILLVCGRRRSR*
Ga0075425_1016502452	3300006854	Populus Rhizosphere	MQLSENSRFISLTLGVFCLTLGAAVLFFSLIERVCFAMKFVGVVVGLSSIAIALGALLLL
Ga0075425_1023392721	3300006854	Populus Rhizosphere	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFIGLCVRLSSIAIALGAILLLFSRLKSR*
Ga0075434_1005173262	3300006871	Populus Rhizosphere	MQLSENSRFISLTLGVFCLTLGAAVLFFSLIERVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0075429_1013474232	3300006880	Populus Rhizosphere	GDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRR*
Ga0075424_1008780362	3300006904	Populus Rhizosphere	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRR*
Ga0075419_106946621	3300006969	Populus Rhizosphere	VIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0075435_1005931332	3300007076	Populus Rhizosphere	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFIGLCVRLSSIAITLGAILLLFSRRR*
Ga0075418_105387851	3300009100	Populus Rhizosphere	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR*
Ga0126374_104939151	3300009792	Tropical Forest Soil	MRLNENAKFIFLTLGVFCLTLGVAVLLLSLVERAFFAMSFVGLCVGLSSIAIALGAILLLFGRWRSR*
Ga0126374_115767871	3300009792	Tropical Forest Soil	MRLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIVIALGAFLLLLGRRSPI*
Ga0126380_100455083	3300010043	Tropical Forest Soil	MKIMRLNENAKFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLVLGLSSIAIVLGAILLLFGRWRSR*
Ga0126380_106316752	3300010043	Tropical Forest Soil	MRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR*
Ga0126380_112281222	3300010043	Tropical Forest Soil	MAERETIMRLNENSRFIALTLGVFCLMLGAAALLFSLIERVFLAERFAGPVVVTSSVAIALGAFLLLLSRRKRV*
Ga0126384_102361512	3300010046	Tropical Forest Soil	MRLNENARFIFLTLGVFWLTLGVGVLLLSLIERAFFAMSFVGLCVELSSIAIALGAILLLFGGWRSR*
Ga0126384_102707981	3300010046	Tropical Forest Soil	RQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRR*
Ga0126384_102893192	3300010046	Tropical Forest Soil	MAERETIMRLNENSRFIALTLGVFCLMLGAAALLFSLVERVFLAERFAGSVVVTSSIAIALGAFLLLLSRRKRV*
Ga0126384_107062662	3300010046	Tropical Forest Soil	MQLSENSRFISLTLGVFCLTLGAAVLLFLLIGRVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0126384_111061082	3300010046	Tropical Forest Soil	SRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGLVVGLSSIAIALGGLLLLLGRRGPI*
Ga0126384_116705491	3300010046	Tropical Forest Soil	FIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFAGLCLRLSSIAITLGAILLLFSRRR*
Ga0126382_101777873	3300010047	Tropical Forest Soil	MNAKRRRGDEEVIMRLNENAKFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR*
Ga0126382_106951852	3300010047	Tropical Forest Soil	MRLNENARFIFLTLGVFCLTLGAAVLLLSLIERALFAMSFIGLCVGLSSIAIALGAILLLCGRWRPK*
Ga0126382_107653422	3300010047	Tropical Forest Soil	MNMRLNETAKFIFLSLGVFCRTLGAAVPLLSLIERAFFAMSFVGLCVGLSSIAIALGAILLLCGRRRSR*
Ga0126382_109828441	3300010047	Tropical Forest Soil	MRLNENAKFIFLTLGVFCLTLGVAVLLLSLIERAFFAMSFVGLVLGLSSIAIVLGAILLLFGRWRSR*
Ga0126382_110562571	3300010047	Tropical Forest Soil	DEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0126382_121427241	3300010047	Tropical Forest Soil	DEEPIMQLSENSRFISLTLGVFCLTLGAAVLLFSLIERLCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0126376_106822901	3300010359	Tropical Forest Soil	MNAKRLQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAITLGAILLLFSRRR*
Ga0126376_121878232	3300010359	Tropical Forest Soil	FISLTLGVFCLTLGAAVLLFLLIGRVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0126376_124617022	3300010359	Tropical Forest Soil	MRLNENAKFIFLTLGVFCLTLGVAVLLLSLVERAFFAMSFVGLCVGFSPIAIALGAILLLFGRWRSR*
Ga0126372_103032742	3300010360	Tropical Forest Soil	MNAKRLRQDEDANMRLNENAKFIFLTLGVFCLTLGVAVLLLSLIERAFFAMSFIGLVVRLSSIAIALGAILLLFGRWRSR*
Ga0126372_105401662	3300010360	Tropical Forest Soil	MAERETIMRLNENSRFIALTLGVFCLMLGAAALLFSLIERVFLAERFAGPVVVTSSVAIALGAFLLLLSRRKQV*
Ga0126372_105531191	3300010360	Tropical Forest Soil	QGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFIGLCVRLSSITITLGAILLLFSRRRSR*
Ga0126372_110843582	3300010360	Tropical Forest Soil	MRLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGAFLLLLGRRSPI*
Ga0126372_129428141	3300010360	Tropical Forest Soil	KRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0126377_1000054811	3300010362	Tropical Forest Soil	MRLNENSRFISLALGVFCLTLGAAVLLFSLIEWICFAMKFVGVIIGPSSIAIAIGALLLLLGSRRQI*
Ga0126377_100883742	3300010362	Tropical Forest Soil	VIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERALFAMSFIGLCVGLSSIAIALGAILLVCGRWRPR*
Ga0126377_101104043	3300010362	Tropical Forest Soil	MNAKRRQGDEEVIMRLNENARFIFLTLGVFSLTLGAAVLLLSMIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRR*
Ga0126377_102142382	3300010362	Tropical Forest Soil	MNAKRRLGDEDVIMRLNENAKFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR*
Ga0126377_104104243	3300010362	Tropical Forest Soil	MKIMRLNENAKFIFLTLGVFCLTLGVAVLLLSLVERAFFAMSFVGLCVGLSSIAIALGAILLLFGRWRSR*
Ga0126377_112593502	3300010362	Tropical Forest Soil	MAERETIMRLNENSRFIALTLGVFCLMLGAAALFFSLIERVFLAERFAGPVVVTSSVAIALGAFLLLLSRRKRV*
Ga0126377_119358741	3300010362	Tropical Forest Soil	ENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCVRLSSIAIALGAILLLLSRRR*
Ga0126379_101811152	3300010366	Tropical Forest Soil	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCIRLSSIAITLGAILLLFSRRR*
Ga0126381_1016169121	3300010376	Tropical Forest Soil	MIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRLKSR*
Ga0126381_1037438371	3300010376	Tropical Forest Soil	MQLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGALLLLLGRGRAI*
Ga0126383_100990852	3300010398	Tropical Forest Soil	MNAKRLQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRLKSR*
Ga0126383_101527792	3300010398	Tropical Forest Soil	MQLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGLVVGLSSIAIALGGLLLLLGRRGPI*
Ga0134122_124564652	3300010400	Terrestrial Soil	MQLNETSRFIILTVGVFCLMLGAAVLLLSLIERVFFAVHFVRLFVAASSVAIAFGAALLLLGRRKSV*
Ga0120192_100047272	3300012021	Terrestrial	MRLNENAKFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR*
Ga0154003_10157571	3300012081	Attine Ant Fungus Gardens	MRLNENARFIFLTLGVFCLTLGVAALLLSLIERAFFAMSFAGLCVRLSSIAIALGAILLLFGRWRSR*
Ga0137374_100070783	3300012204	Vadose Zone Soil	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0137369_100337175	3300012355	Vadose Zone Soil	ARSKFFALRMNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0126375_104489262	3300012948	Tropical Forest Soil	MQLSENSKFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI*
Ga0126369_100292453	3300012971	Tropical Forest Soil	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR*
Ga0126369_100364705	3300012971	Tropical Forest Soil	MRLSDNSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGAFLLLLGRRRPI*
Ga0126369_112892742	3300012971	Tropical Forest Soil	MRLNENARFIFLTLGVFWLTLGVGVLLLSLIERAFFAMSFVGLCVGLSSIAIALGAILMLFGGWRSR*
Ga0132258_123227492	3300015371	Arabidopsis Rhizosphere	MHLNENSRFIFLTLGVFCLTLGVAILVFSLIERILFRVGFVGIFVGVSSFAIAIGILILVLVRRPTG*
Ga0163161_110354872	3300017792	Switchgrass Rhizosphere	MHLNENSRFIFLTLGVFCLTLGVAILVFSLIERILFRVGFVGLFVGVSSFAIAIGILILVLVRRPT
Ga0193725_10027785	3300019883	Soil	MQLNENSRFIILTLGVFCLMLGAAVLLFSLIERVFFAVHFVRLFVAASSVAIAFGTALLLLGRRRSV
Ga0209466_10498991	3300027646	Tropical Forest Soil	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRRLR
Ga0209465_100049763	3300027874	Tropical Forest Soil	MRLSENSRFISLTLGVFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIVIALGAFLLLLGRRSPI
Ga0209465_100054484	3300027874	Tropical Forest Soil	MRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAIALGAILLLFSRRR
Ga0209382_100311695	3300027909	Populus Rhizosphere	MQLSENSRFISLTLGLFCLTLGAAVLLFSLIERVCFAMKFVGVVVGLSSIAIALGALLLLLGRRRPI
Ga0209382_100421024	3300027909	Populus Rhizosphere	EEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSMIERAFFAMSFVGLCIRLSSIAIALGAILLLFSRRR
Ga0209382_107010292	3300027909	Populus Rhizosphere	MNAKRRQGDEEVIMRLNENARFIFLTLGVFCLTLGAAVLLLSLIERAFFAMSFVGLCVRLSSIAITLGAILLLFSRRR
Ga0307469_101064162	3300031720	Hardwood Forest Soil	MQLNENSRFIILTLGVFCLMLGAAVLLFSVIERVFFAVHFVRLFVAASSVAIAFGTALLLLGRRRSI
Ga0307468_1003443022	3300031740	Hardwood Forest Soil	MQLNENSRFIILTLGVFCLMLGAAVLLFSLIERVFFAVHFVRLFVAASSAAIAFGTALLLLGRRRSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083858

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences