NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F083834

Metagenome / Metatranscriptome Family F083834

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083834
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 67 residues
Representative Sequence VLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP
Number of Associated Samples 97
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.89 %
% of genes near scaffold ends (potentially truncated) 38.39 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.321 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(24.107 % of family members)
Environment Ontology (ENVO) Unclassified
(26.786 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.036 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80
1ICCgaii200_03508782
2JGI10216J12902_1021707011
3Ga0062593_1005782531
4Ga0062593_1023715931
5Ga0062590_1001907122
6Ga0063356_1013618052
7Ga0062595_1021844862
8Ga0062592_1002413783
9Ga0066814_100093952
10Ga0066677_107400201
11Ga0066683_100118705
12Ga0066683_108996681
13Ga0066680_100590483
14Ga0066690_105762002
15Ga0066684_102792751
16Ga0066685_101720731
17Ga0066685_109228852
18Ga0068869_1004851422
19Ga0070691_110218852
20Ga0070674_1014707571
21Ga0070703_1000002649
22Ga0070705_1002980851
23Ga0066686_106811163
24Ga0073909_100638903
25Ga0070686_1017809162
26Ga0070696_1000088262
27Ga0070704_1007615232
28Ga0066707_108393501
29Ga0066698_108855882
30Ga0066699_109713952
31Ga0066652_1000295503
32Ga0075425_1024624961
33Ga0074063_129818172
34Ga0075435_1017797282
35Ga0066710_1000084036
36Ga0066710_1007090652
37Ga0066710_1020486182
38Ga0099827_105417833
39Ga0105245_122329001
40Ga0066709_1000053371
41Ga0066709_1001645424
42Ga0066709_1006558183
43Ga0066709_1011783962
44Ga0066709_1021727591
45Ga0105243_124283352
46Ga0126319_11045321
47Ga0105239_112263363
48Ga0137364_106023242
49Ga0137364_106975782
50Ga0137383_103894591
51Ga0137365_100222598
52Ga0137376_100654781
53Ga0137370_104019931
54Ga0137384_101144584
55Ga0164300_107461041
56Ga0164298_101385482
57Ga0164303_110848862
58Ga0164301_101466722
59Ga0164302_103010381
60Ga0164302_104574171
61Ga0164308_117338701
62Ga0163162_115602222
63Ga0157375_106137372
64Ga0157380_123492801
65Ga0120170_10219372
66Ga0134089_105477141
67Ga0134069_13329772
68Ga0184610_11238231
69Ga0184605_101199972
70Ga0184608_103896852
71Ga0184621_100085101
72Ga0187766_110411102
73Ga0184619_104185111
74Ga0066655_107898212
75Ga0066669_101323305
76Ga0066669_102428712
77Ga0173482_100644322
78Ga0193747_10148551
79Ga0193719_101347373
80Ga0193695_10149453
81Ga0193695_10188812
82Ga0224452_12540831
83Ga0207684_115342922
84Ga0207693_103577894
85Ga0207662_101130582
86Ga0207646_117967961
87Ga0207677_101682213
88Ga0207648_103285673
89Ga0209236_12029002
90Ga0209807_10135982
91Ga0209160_11051323
92Ga0209157_13286541
93Ga0208761_10165222
94Ga0209811_100755812
95Ga0209590_105641472
96Ga0268265_104465811
97Ga0307276_100604973
98Ga0307295_100237273
99Ga0307280_101918161
100Ga0307282_105054442
101Ga0307305_102664671
102Ga0307296_101852401
103Ga0307312_100308715
104Ga0307312_103690682
105Ga0307312_106353632
106Ga0307286_102553602
107Ga0307300_101138872
108Ga0307308_105239332
109Ga0307497_102430181
110Ga0308194_102654572
111Ga0326597_103879272
112Ga0315273_103011771
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 59.42%    Coil/Unstructured: 40.58%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060VLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
97.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Sediment
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Grasslands Soil
Surface Soil
Soil
Permafrost
Soil
Grasslands Soil
Tropical Peatland
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
4.5%24.1%8.0%4.5%15.2%10.7%7.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_035087822228664021SoilVLGEEEVVVMDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
JGI10216J12902_10217070113300000956SoilGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVFATKVVNMIVSLRRP*
Ga0062593_10057825313300004114SoilDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0062593_10237159313300004114SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP*
Ga0062590_10019071223300004157SoilVVLDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0063356_10136180523300004463Arabidopsis Thaliana RhizosphereVVLDVKLVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEAGDVVLATKVVNMIVSLRRP*
Ga0062595_10218448623300004479SoilVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEAGDVVLATKVVNMIVSLRRP*
Ga0062592_10024137833300004480SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0066814_1000939523300005162SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPMDLEPGEVVLATKVVNMIVSLRRP*
Ga0066677_1074002013300005171SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLQTGEVVLATKVVNMIVS
Ga0066683_1001187053300005172SoilMLGEEEVVVLDVKPIDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRAGDVVMATKIVNMIVSLRRP*
Ga0066683_1089966813300005172SoilVLGEEEVVVLDVVPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLR
Ga0066680_1005904833300005174SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRSGDVVLATKVVNMIVSLRRP*
Ga0066690_1057620023300005177SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLQTGEVVLATKVVNMIVSLRRP*
Ga0066684_1027927513300005179SoilVLGEEEVVVVDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLQTGEVVLATKVVNMIVSLRRP*
Ga0066685_1017207313300005180SoilMLGEEEVVVLDVKPIDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRAGDVVMATKIVNMIVSLR
Ga0066685_1092288523300005180SoilVLGEEEVVVLDVKPVDLHGVIYRDVAVTFADRSVGQARLGPEGVPTDLRPGDVVLATKVVNMIVSLRRP*
Ga0068869_10048514223300005334Miscanthus RhizosphereVLGEQEVVVLDVKPVDLHGVIYRDVTVTFADRTIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0070691_1102188523300005341Corn, Switchgrass And Miscanthus RhizosphereVLDEEEVVVLDVKPVDLHGVIYRDVTVTFADRTIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0070674_10147075713300005356Miscanthus RhizosphereVLGEEEVVVLDVKPVDLHGVIYRDVTVTFADRTIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0070703_10000026493300005406Corn, Switchgrass And Miscanthus RhizosphereVLGEEEVVVVDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNVIVSLRRP*
Ga0070705_10029808513300005440Corn, Switchgrass And Miscanthus RhizosphereVLGEEEVVVVDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP*
Ga0066686_1068111633300005446SoilVLDEEEVVVLDVTSVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLQPGNVVFATKVVNMIVSLRR
Ga0073909_1006389033300005526Surface SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIISLRRP*
Ga0070686_10178091623300005544Switchgrass RhizosphereVVLDVKPVDLHGVIYRDVTVTFADRTIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0070696_10000882623300005546Corn, Switchgrass And Miscanthus RhizosphereVLDEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLHRP*
Ga0070704_10076152323300005549Corn, Switchgrass And Miscanthus RhizosphereVLGEEEVVVLDVKPVDLHGVLYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0066707_1083935013300005556SoilVLGEEEVVVLDVKPVDLHGVIYRDVAVTFADRSVGQARLGPEGVPADLRPGDVVLATKVVNMIVSLRR
Ga0066698_1088558823300005558SoilEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRPGDVVLATKVVNMIVSLRRP*
Ga0066699_1097139523300005561SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLQTGEVVLATKVVNMIVSLRR
Ga0066652_10002955033300006046SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLAPGDVVLATRVVNMIVSLRRP*
Ga0075425_10246249613300006854Populus RhizosphereVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0074063_1298181723300006953SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPMDLEPGDVVLATKVVNMIVSLRRP*
Ga0075435_10177972823300007076Populus RhizosphereVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEAGDVVLATKVVNMIVSLRRP*
Ga0066710_10000840363300009012Grasslands SoilVLGEEEVVVLKVNPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP
Ga0066710_10070906523300009012Grasslands SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPMDLEPGDVVLATRVVNMIVSLRRP
Ga0066710_10204861823300009012Grasslands SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRPGDVVLATKVVNMIVSLRRP
Ga0099827_1054178333300009090Vadose Zone SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGKARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRQ*
Ga0105245_1223290013300009098Miscanthus RhizosphereLDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0066709_10000533713300009137Grasslands SoilFVLGEEEVVVLKVNPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP*
Ga0066709_10016454243300009137Grasslands SoilVLGEEEVVVLDVKPVDLHGVIYRDVAVTFADRSVGQARLGPEGVPADLRPGDVVLATKVVNMIVSLRRP*
Ga0066709_10065581833300009137Grasslands SoilVLGEEKVVVLNVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVV
Ga0066709_10117839623300009137Grasslands SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRPGDVVLATKVVNMIVSLRRP*
Ga0066709_10217275913300009137Grasslands SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDHSVGQARLGPEGVPADLQTGDVVLATKVVNMIVSLRRP*
Ga0105243_1242833523300009148Miscanthus RhizosphereVLDEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0126319_110453213300010147SoilEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0105239_1122633633300010375Corn RhizosphereGEQEVVVLDVKPVDLHGVIYLDVTVTFADRTIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0137364_1060232423300012198Vadose Zone SoilVLGEEEVVVLDVVPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP*
Ga0137364_1069757823300012198Vadose Zone SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0137383_1038945913300012199Vadose Zone SoilDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP*
Ga0137365_1002225983300012201Vadose Zone SoilMLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP*
Ga0137376_1006547813300012208Vadose Zone SoilVLGEEEVVVLDVKPVDLHGVIYRDVAVTFADRSVGQARLGPEGVPADLRPGDVVLATKVVNMIVSLR
Ga0137370_1040199313300012285Vadose Zone SoilVDLHGVIYRDVAVTFADRSVGQARLGPEGVPADLRPGDVVLATKVVNMIVSLRRP*
Ga0137384_1011445843300012357Vadose Zone SoilVLGEEEVVVLEVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP*
Ga0164300_1074610413300012951SoilGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEAGDVVLATKVVNMIVSLRRP*
Ga0164298_1013854823300012955SoilVLGEEEVLVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0164303_1108488623300012957SoilEEEVLVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP*
Ga0164301_1014667223300012960SoilMLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEAGDVVLATKVVNMIVSLRRP*
Ga0164302_1030103813300012961SoilVVVLDVKTVDLHGVLYRDVTVTFPDRSIGQARLGPEGVPDDLEPGDVVLATKVVNMIVSLRRP*
Ga0164302_1045741713300012961SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVDMIVSLRRP*
Ga0164308_1173387013300012985SoilEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0163162_1156022223300013306Switchgrass RhizosphereVLDEEEVVVLDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0157375_1061373723300013308Miscanthus RhizosphereVLGEQEVVVLDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP*
Ga0157380_1234928013300014326Switchgrass RhizosphereEQEVVVLDVKPVDLHGVIYRDVTVTFADRTIGQARLGPEGVPADLEPGDVVLAKVVNMIVSLRRP*
Ga0120170_102193723300014823PermafrostVLGEEEVVVLDVKPVDLHGVVYRDVTVTFPDRSVGRARLGPEGVPSDLRPGDIVLATKVVNMIVSLRRP*
Ga0134089_1054771413300015358Grasslands SoilMLGEEEDVVLDVKPIDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADRRAGDVVMATKIV
Ga0134069_133297723300017654Grasslands SoilAASMLGEEEVVVLDVKPIDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRAGDVVMATKIVNMIVSLRRP
Ga0184610_112382313300017997Groundwater SedimentGVGRRSLGPVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0184605_1011999723300018027Groundwater SedimentVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0184608_1038968523300018028Groundwater SedimentVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPMDLEPGDVVLATKVVNMIVSLRRP
Ga0184621_1000851013300018054Groundwater SedimentVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPESVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0187766_1104111023300018058Tropical PeatlandMQGEREAVVVEVRPFDLHGVVYRDVTIAYEDRSVDQARLGPESVPDDLQPGEIVWATRVVNMIVSLRRPG
Ga0184619_1041851113300018061Groundwater SedimentVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDQSIGQARLGPEGVPMDLEPGDVVLATKVVNMIVSLRRP
Ga0066655_1078982123300018431Grasslands SoilMLGEEEVVVLDVKPIDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRAGDVVMATKIVNMIVSLRRP
Ga0066669_1013233053300018482Grasslands SoilMLGEEEVVVLDVKPIDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRAGDVVMATKIV
Ga0066669_1024287123300018482Grasslands SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLAPGDVVLATRVVNMIVSLRRP
Ga0173482_1006443223300019361SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATRVVNMIVSLRRP
Ga0193747_101485513300019885SoilVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0193719_1013473733300021344SoilVLGEEEVVVLDVKLVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATRVVNMIVSLRRP
Ga0193695_101494533300021418SoilVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATRVVNMIVSLRRP
Ga0193695_101888123300021418SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP
Ga0224452_125408313300022534Groundwater SedimentVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVV
Ga0207684_1153429223300025910Corn, Switchgrass And Miscanthus RhizosphereVLGEEEVVVVDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP
Ga0207693_1035778943300025915Corn, Switchgrass And Miscanthus RhizosphereVVDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRR
Ga0207662_1011305823300025918Switchgrass RhizosphereVLGEQEVVVLDVKPVDLHGVIYRDVTVTFADRTIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP
Ga0207646_1179679613300025922Corn, Switchgrass And Miscanthus RhizosphereVLDEEEVVVLDVKPVDLHGVIYRDVTVTFSDRSIGQARLGPEGVPADLEPGDVVFATKVVNMIVSLRRP
Ga0207677_1016822133300026023Miscanthus RhizosphereVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0207648_1032856733300026089Miscanthus RhizosphereVLDEEEVVVLDVKPVDLHGVIYRDVTVTFADRTIGQARLGPEGVPADLEPGDVVLATKVVNMIVSLRRP
Ga0209236_120290023300026298Grasslands SoilVLGEEEVVVLDVKAVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRP
Ga0209807_101359823300026530SoilVLGEEEVVVVDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLQTGEVVLATKVVNMIVSLRRP
Ga0209160_110513233300026532SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGVPSDLRSGDVVLATKVVNMIVSLRRP
Ga0209157_132865413300026537SoilMLGEEEVVVLDVKPIDLHGVIYRDVTVTFPDRSVGQARLGPEGVPADLRAGDVVMATKIVNMI
Ga0208761_101652223300026995SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPMDLEPGEVVLATKVVNMIVSLRRP
Ga0209811_1007558123300027821Surface SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGDVVLATKVVNMIISLRRP
Ga0209590_1056414723300027882Vadose Zone SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGKARLGPEGVPSDLRPGDVVLATKVVNMIVSLRRQ
Ga0268265_1044658113300028380Switchgrass RhizosphereVVLDVKPVDLHGVIYRDVTVTFADRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0307276_1006049733300028705SoilEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPMDLEPGDVVLATKVVNMIVSLRRP
Ga0307295_1002372733300028708SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDQSIGQARLGPEGVPMDLEPGDVVLA
Ga0307280_1019181613300028768SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATRVVNMIVSLR
Ga0307282_1050544423300028784SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGQARLGPEGLPADLQPGEVVLATKVVNMIVSLRRP
Ga0307305_1026646713300028807SoilMGEEEAIVLEIKPFDLHGVRYRDVTVTYKDRSVDNARLGPEGVPEDLQPGEVVLATKV
Ga0307296_1018524013300028819SoilVLGEEEVVVLDVKPVDLHGVIYRDVIVTFPDRSIGQARLGPEGVPTDLEPGDVVLATRVVNMIVSLR
Ga0307312_1003087153300028828SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDQSIGQARLGPEGVPMDLEPGDVVLATKVVNMIVSLR
Ga0307312_1036906823300028828SoilVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSVGRARLGPEGLPADLQPGEVVLATKVVNMIVSLRRP
Ga0307312_1063536323300028828SoilGEEEVVVLDVKPVDLHGVIYRDVIVTFPDRSIGQARLGPEGVPTDLEPGDVVLATRVVNMIVSLRRP
Ga0307286_1025536023300028876SoilVLDVKPVDLHGVIYRDVTVTFPDQSIGQARLGPEGVPMDLEPGDVVLATKVVNMIVSLRR
Ga0307300_1011388723300028880SoilVLGEEEVVVLDVKPVDLHGVIYWDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATKVVNMIVSLRRP
Ga0307308_1052393323300028884SoilVVLDVKLVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPTDLEPGDVVLATRVVNMIVSLRRP
Ga0307497_1024301813300031226SoilSGVGRRSLRPVLGEEEVVVLDVKPVDLHGVIYRDVTVTFPDRSIGQARLGPEGVPADLEPGEVVLATKVVNMIVSLRRP
Ga0308194_1026545723300031421SoilVVVLDVKPVDLHGVIYRDVTVTFPDQSIGQARLGPEGVPMDLEPGDVVLATKVVNMIVSLRRP
Ga0326597_1038792723300031965SoilMDELEVVVVEVKPFDLHGVRYHDVTITYPDRSVGNARLGPEGVPEDLRAGETVMATKIMNMVVSLRRR
Ga0315273_1030117713300032516SedimentMDEVEAVVLEVKPFDLHGVRYHDVTITYPDRTVDNARLGPEGVPDDLKAGEAVLATKVMNMVVSLRRP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.