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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F083641 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 112 |
| Average Sequence Length | 73 residues |
| Representative Sequence | MENRTTGTKAQNGNFAKQAEDIGEQAMQQLDQLREQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Number of Associated Samples | 70 |
| Number of Associated Scaffolds | 112 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 31.25 % |
| % of genes near scaffold ends (potentially truncated) | 61.61 % |
| % of genes from short scaffolds (< 2000 bps) | 98.21 % |
| Associated GOLD sequencing projects | 65 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.47 |
| Hidden Markov Model |
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| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (75.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere (24.107 % of family members) |
| Environment Ontology (ENVO) | Unclassified (49.107 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (64.286 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
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| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.47 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 112 Family Scaffolds |
|---|---|---|
| PF12732 | YtxH | 77.68 |
| PF00072 | Response_reg | 6.25 |
| PF04545 | Sigma70_r4 | 3.57 |
| PF00158 | Sigma54_activat | 1.79 |
| PF00571 | CBS | 0.89 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 75.00 % |
| All Organisms | root | All Organisms | 25.00 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 24.11% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 12.50% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 9.82% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 7.14% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 6.25% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 5.36% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.46% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.57% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.57% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 2.68% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.68% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.79% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.79% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.79% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.79% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.79% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.89% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.89% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.89% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.89% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.89% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.89% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.89% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300003321 | Sugarcane bulk soil Sample H1 | Environmental | Open in IMG/M |
| 3300003571 | Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
| 3300003693 | Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004799 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004800 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005575 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 | Environmental | Open in IMG/M |
| 3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300010128 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010137 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010143 | Soil microbial communities from Mekong Delta, Cambodia to study soil gas exchange rates - MK-CA-DRY metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010146 | Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010152 | Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300011332 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012381 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012405 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013052 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300013062 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
| 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
| 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022513 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022720 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026555 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300029701 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300032955 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5 | Environmental | Open in IMG/M |
| 3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
| 3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| soilH1_101883993 | 3300003321 | Sugarcane Root And Bulk Soil | MENRTTGMKAKNGNFAQQAEEIGEQAMQQLDHLREQASEVGERVIAFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0007419J51692_10356131 | 3300003571 | Avena Fatua Rhizosphere | KKESAMEKRTSGGTSAPNGNFQQQAEEIGEKAMAEIDRLRSQASEYGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0032354_11269561 | 3300003693 | Avena Fatua Rhizosphere | SAMEKRTSGGTSAPNGNFQQQAEEIGEKAMAEIDRLRSQASEYGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0058863_118262512 | 3300004799 | Host-Associated | MENRTSGMRAKNGNFAQQAEDLGEQAMQQLDHLREQAGEIGERVIEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0058861_119257202 | 3300004800 | Host-Associated | MSSRNGDFAKHAEEVGEQAMQQLDRLRDQASELGERAVAFIKERPGTSLLIAAAAGYLIGRLVRS* |
| Ga0058861_119612211 | 3300004800 | Host-Associated | MENRTTGTKAQNGNFAKQAEDIGEQAMQQLDQLREQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0058860_118610042 | 3300004801 | Host-Associated | MENQNRTTGVKAKNGNFAQQAEDIGEQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0058862_126405041 | 3300004803 | Host-Associated | MENRTTGTRAKNGGFAQQAEDIGDQAMQQLDHLREQASEVGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0058862_126691172 | 3300004803 | Host-Associated | AMENPTTGMGRKNGSNFAQQAEDIGEQAMEQLDHLRQQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0070658_107824231 | 3300005327 | Corn Rhizosphere | MERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0070680_1014211752 | 3300005336 | Corn Rhizosphere | MERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLLIAA |
| Ga0070671_1018133901 | 3300005355 | Switchgrass Rhizosphere | MENQNRTTGMKAKNGNFAQQAEDIGEQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0070673_1014791571 | 3300005364 | Switchgrass Rhizosphere | MERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQTSEVGEHVVAFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0070659_1020076622 | 3300005366 | Corn Rhizosphere | MENRTTGTRAKNGGFAQQAEDIGDQAMQQLDHLREQASEVGERVVEFIKERPGTSLLIAA |
| Ga0070714_1017243782 | 3300005435 | Agricultural Soil | MENRTTGTKSQNGNFAKQAEDIGEQAMQQLDQLREQASEMGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0070678_1009379662 | 3300005456 | Miscanthus Rhizosphere | MENRVAGSKAKNGNFAHQAEEIGEQAMQQLDALREQAGEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0070679_1014587631 | 3300005530 | Corn Rhizosphere | MENRVSGRARNGNFAQQAEELGEQAMHQLDRLRDEASELGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0066702_107356011 | 3300005575 | Soil | TKAQNGNFAKQAEDLGEQAMQQLDHLRDQASEIGERVVDFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0066706_102022732 | 3300005598 | Soil | MENRTTGTTKAPNGNFAQQAEDIGEQAMHQLESLREQASELGERVVTFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0066903_1080040641 | 3300005764 | Tropical Forest Soil | MEDRASGTKSRNGNFAQHAEEIGDQAMEQLDRLRDQASELGERVVAFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0066710_1011396972 | 3300009012 | Grasslands Soil | MENRTTGTTKAPNGNFAQQAEDIGEQAMHQLESLREQASELGERVVTFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0105242_124084022 | 3300009176 | Miscanthus Rhizosphere | MQPETKESPMENRVAGSKAKNGNFAHQAEEIGEQAMQQLDALREQAGEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0127486_10276821 | 3300010128 | Grasslands Soil | ENRTTGTTKAPNGNFAQQAEDIGEQAMHQLESLREQASELGERVVTFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126323_11812772 | 3300010137 | Soil | MENRTSGGSKAANGNFTQQAEEIGEQAMQQLDNLREQASEISERVVGFIKERPGTSLLIAAAAGYFIGRILRS* |
| Ga0126322_12470772 | 3300010143 | Soil | MENRTTSRSKNGGFAREAEEIGDQAMQQLDHLREQASELGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126320_12067351 | 3300010146 | Soil | MEKRTSGGTSAPNGNFQQQAEEIGEKAMAEIDRLRSQASEYGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126319_11064842 | 3300010147 | Soil | DDFIDLQEERIMEKRSSGAIHSPNGNFGQQAEEMGEKAMAEMDRLRQQASEGGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126318_107834822 | 3300010152 | Soil | MENRTTGRAKNGNFAQQAEDIGDQAMQQLDHLREQASEVGERVVQFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126318_109780541 | 3300010152 | Soil | SEQAEHLRDQAQHLRDEAMEQIDHLREQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRILRS* |
| Ga0127503_100570512 | 3300010154 | Soil | PMENRTSGTKAKNGNFAAQAEDISAQAMEKLDHLREQASEVGECVVSFIKERPGTSLLIAAAAGNLIGRLVRS* |
| Ga0127503_101273431 | 3300010154 | Soil | PMESRTTGSKAKNGNFAAQAEDIGEQAMQQLDHLREQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0127503_103265602 | 3300010154 | Soil | ENKTTSGVRAANGNFTQQAEDLGQRAMEQLEELRGQASEMGERVVAFIKERPGTSLLIAVAAGYFIGRIVRS* |
| Ga0105239_129728372 | 3300010375 | Corn Rhizosphere | MERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLHEQASEVGERVVAFVKERPGTSLLIA |
| Ga0134127_105600051 | 3300010399 | Terrestrial Soil | DICNRRSQEKPMENRTTGTRAKNGGFAQQAEDIGDQAMQQLDHLREQASEVGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126317_101785851 | 3300011332 | Soil | RFFDLQEERIMEKRTSGAIHSPNGNFAQQAEEMGEKAMAEMDRLRQQASEVGERVVDFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126317_103116791 | 3300011332 | Soil | NRTTGSSKAANGNFSQQAEQIGEQAMQQLDHLREQASEIGERVVGFIKERPGTSLLIAAAAGYFIGRILRS* |
| Ga0126317_103139241 | 3300011332 | Soil | PMENRTTGTKAKNGNFAAQAEDIGEQAMQQLDHLREQASELGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126317_107073501 | 3300011332 | Soil | MENRVTGTKAKNGNFAHQAEEIGEQAMHQLEALRDQAGEIGERIVDFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0126317_110429231 | 3300011332 | Soil | TKERAMEKRTATGGSSGPNGNFQQQAEEIGERAMAEIDRLRQQASDIGERVVDFIKERPGTSLLIAAATGYLIGRIVRS* |
| Ga0150985_1006892062 | 3300012212 | Avena Fatua Rhizosphere | MENRTTGSKAANGNFSQQAEEIGEQAMQQLDNLREQASEISERVVGFIKERPGTSLLIAAAAGYFIGRILRS* |
| Ga0150985_1045381191 | 3300012212 | Avena Fatua Rhizosphere | PMENQNRTTGIKAKNGNFAQQAEDIGEQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150985_1049320782 | 3300012212 | Avena Fatua Rhizosphere | DFIDLQEERIMEKRTSGAIHSPNGNFAQQAEEMGEKVMAEMDRLRQQASEVGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150985_1061559051 | 3300012212 | Avena Fatua Rhizosphere | TRRRRMENRTTGSTKAANGNFTQQAEEIGEQAMQQLDNLREQASEIGERVVGFIKERPGTSLLIAAAAGYFIGRILRS* |
| Ga0150985_1081069071 | 3300012212 | Avena Fatua Rhizosphere | ISKKESAMEKRTSGGTSAPNGNFQQQAEEIGEKAMAEIDRLRSQASEYGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150985_1128265491 | 3300012212 | Avena Fatua Rhizosphere | LSVSNTETKESPMENRVAGTKAKNGNFAHQAEEIGEQAMQQLDALREQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150985_1134822371 | 3300012212 | Avena Fatua Rhizosphere | TLMENRTTGTKAQNGNFAKQAEDIGEQAMQQLDQLREQASEMGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150985_1164913031 | 3300012212 | Avena Fatua Rhizosphere | KPESDQQERIMENRTSGGIKAPNGNFAQQAEEIGEKAMAEIDRLRQQASDVGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150985_1189527931 | 3300012212 | Avena Fatua Rhizosphere | MRPAHDEENAMENRTTGTTNAPNGNFTQQAEDIGEQAMQQLENLREQASEMGERVVTFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150985_1221177883 | 3300012212 | Avena Fatua Rhizosphere | TKKESAMEKRTSGGTSAPNGNFQQQAEEIGEKAMAEIDRLRSQASEYGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0134026_11828971 | 3300012381 | Grasslands Soil | RIMEKRTSGAIHSPNGNFAQQAEEMGEKAMAEMDRLRQQASEVGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0134041_13045371 | 3300012405 | Grasslands Soil | MENRTTGTKAPNGNPTQQAEDIGEQAMQQLENLREQASEMGERVVTFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150984_1023709021 | 3300012469 | Avena Fatua Rhizosphere | EAHTTRRRRMENRTTGSTKAANGNFTQQAEEIGEQAMQQLDNLREQASEIGERVVGFIKERPGTSLLIAAAAGYFIGRILRS* |
| Ga0150984_1040088911 | 3300012469 | Avena Fatua Rhizosphere | LMENRTTGTKAQNGNFAKQAEDIGEQAMQQLDQLREQASEMGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150984_1071583221 | 3300012469 | Avena Fatua Rhizosphere | KESPMENRVAGTKAKNGNFAHQAEEIGEQAMQQLDALREQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150984_1090463261 | 3300012469 | Avena Fatua Rhizosphere | KEKPMENRTTGMKAKNGNFAQQAEEIGDQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYFIGRILRS* |
| Ga0150984_1129616721 | 3300012469 | Avena Fatua Rhizosphere | FIDLQEERIMEKRTSGAIHSPNGNFAQQAEEMGEKAMAEMDRLRQQASEVGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150984_1220299261 | 3300012469 | Avena Fatua Rhizosphere | MTKKESAMEKRTSGGTSAPNGNFQQQAEEIGEKAMAEIDRLRSQASEYGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0150984_1235333721 | 3300012469 | Avena Fatua Rhizosphere | PESDQQERIMENRTSGGIKAPNGNFAQQAEEIGEKAMAEIDRLRQQASDVGEQVVAFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0137407_115777841 | 3300012930 | Vadose Zone Soil | RTTGTKAKNGNFAAQAEDIGEQAMQQLDHLREQASELGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0164300_106103432 | 3300012951 | Soil | MENQNRTTGVKAKNGNFAQQAEDIGEQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYRIGRIVRS* |
| Ga0164304_110722062 | 3300012986 | Soil | MENQNRTTGVKAKNGNFAQQAEDIGEQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYL |
| Ga0164305_121548661 | 3300012989 | Soil | MENQNRTTGMKAKNGNFAQQAEDIGEQAMQQLDQLHEQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0154014_1319472 | 3300013052 | Corn, Switchgrass And Miscanthus Rhizosphere | KERAMERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0154010_1796751 | 3300013062 | Corn, Switchgrass And Miscanthus Rhizosphere | RAMERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0157374_106232782 | 3300013296 | Miscanthus Rhizosphere | MENRVAGTKAKNGNFAHQAEEIGEQAMQQLDALREQAGEIGERVISFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0157374_107120911 | 3300013296 | Miscanthus Rhizosphere | PMENRVSGTKAKNGNFAHQAEEIGEQAMQQLDHLREQAGEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0157372_132192521 | 3300013307 | Corn Rhizosphere | MQPEIRGERAMENPTTGMGRKNGNNFAQQAEDIGEQAMEQLDHLRQQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS* |
| Ga0187779_112019321 | 3300017959 | Tropical Peatland | RAKNGGFAREAEEIGDQAMQQLDHLRERASELGERVVEFVKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0197907_103793872 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MENQNRTTGVKAKNGNFAQQAEDIGEQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0197907_103910401 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0197907_103994881 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MENRTTGTKAQNGNFAKQAEDIGEQAMQQLDQLREQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0197907_104770811 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MENKTTTGVRAPNGNFTQQAEDLGQRAMEQLEELREQAGEMGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0197907_105082192 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MENKTSSGGVRASNGNFTQQAEDLGQRAMEQLEELREQAGEMGERVIAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0197907_107408792 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MENRVSGRARNGNFAQQAEELGEQAMHQLDRLRDEASELGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0197907_108701611 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MENKTTSGVRAANGNFAQQAEEVGQRAMEQLEELREQAGEMGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206356_105758382 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | ERAMENKTTTGVRAPNGNFTQQAEDLGQRAMEQLEELREQAGEMGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206356_108156512 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | VMENRTSGMRAKNGNFAQQAEDLGEQAMQQLDHLREQAGEIGERVIEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206356_116852052 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | ERAMENKTTSGVRAANGNFAQQAEEVGQRAMEQLEELREQAGEMGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206356_117221891 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | MENPTTGMGRKNGSNFAQQAEDIGEQAMEQLDHLRQQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206349_10402941 | 3300020075 | Corn, Switchgrass And Miscanthus Rhizosphere | MENRTSGMRAKNGNFAQQAEDLGEQAMQQLDHLREQAGEIGERVIEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206349_17797852 | 3300020075 | Corn, Switchgrass And Miscanthus Rhizosphere | ENKTSSGGVRASNGNFTQQAEDLGQRAMEQLEELREQAGEMGERVIAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206355_15838261 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | RPMENKTSSGGVRASNGNFTQQAEDLGQRAMEQLEELREQAGEMGERVIAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206351_106943721 | 3300020077 | Corn, Switchgrass And Miscanthus Rhizosphere | RTVMENRTSGMRAKNGNFAQQAEDLGEQAMQQLDHLREQAGEIGERVIEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206352_100097201 | 3300020078 | Corn, Switchgrass And Miscanthus Rhizosphere | RQDMENPTTGMGRKNGSNFAQQAEDIGEQAMEQLDHLRQQASEIGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206352_102957811 | 3300020078 | Corn, Switchgrass And Miscanthus Rhizosphere | KETPMENQNRTTGVKAKNGNFAQQAEDIGEQAMQQLDQLREQASEIGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206350_111012382 | 3300020080 | Corn, Switchgrass And Miscanthus Rhizosphere | ERAMERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206350_111189912 | 3300020080 | Corn, Switchgrass And Miscanthus Rhizosphere | ATEASMENSGMGSRSQKGNLTQKAERMGGQAMEQIDHLRAQASEIGERVVGFIKERPVTSLIIAATAGYLLGRILRS |
| Ga0206354_108471362 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | MENRTTGTRAKNGGFAQQAEDIGDQAMQQLDHLREQASEVGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0206353_112460031 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | ERAMENKTTTGVRAPNGNFTQQAEDHGQRAMEQLEELREQAGEMGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0210406_112688741 | 3300021168 | Soil | MESRTTGTKAKNGNFAAQSEDISEQAMQQLDQLRERASELGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0210383_106036822 | 3300021407 | Soil | MEKTTGGIKTANGSFTAHAEDLGEQAMAQIDRLREQAGEVSERVVGFIKERPGTSLLIAAAAGYLIGRMLRS |
| Ga0210410_107692622 | 3300021479 | Soil | MDKSSVKSSNGNFAQQAERIGEQAMEQLDHLREQASEMGDRIVGIIKERPVTSLLIAAAAGYLIGRILRS |
| Ga0224712_105757802 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | EKTSARSRNGNFGEEAQAIGERAMHELERLREQAGVFGERVVAFIRERPTTSLLIAAAAGYIVGRIVRS |
| Ga0224712_106314982 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MSSRNGDFAKHAEEVGEQAMQQLDRLRDQASELGERAVAFIKERPGTSLLIAAAAGYLIGRLVRS |
| Ga0224712_106329681 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | RAMENKTTTGVRAPNGNFTQQAEDLGQRAMEQLEELREQAGEMGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0224712_106873501 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | QEKPMENRTTGTRAKNGGFAQQAEDIGDQAMQQLDHLREQASEVGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0242667_10526822 | 3300022513 | Soil | RSDMEKTTGGIKTANGSFTAHAEDLGEQAMAQIDRLREQAGEVSERVVGFIKERPGTSLLIAAAAGYLIGRILRS |
| Ga0242672_11400242 | 3300022720 | Soil | HMENRTSGSKNGNFAAEAEEIRDQAKQQLEHLREQASEIGERVVGFIKERPGTSLLIAAAAGYLIGRILRS |
| Ga0207705_103838541 | 3300025909 | Corn Rhizosphere | MERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLLIAAAAGYLI |
| Ga0207671_114354722 | 3300025914 | Corn Rhizosphere | MERTTGTKAKNGNFAQQAEDVGEQAMQQLDHLREQASEVGERVVAFVKERPGTSLL |
| Ga0207690_118335401 | 3300025932 | Corn Rhizosphere | MENRTTGTRAKNGGFAQQAEDIGDQAMQQLDHLREQASEVGERVVEFIKERPGTSLLIAAAAG |
| Ga0207674_122705071 | 3300026116 | Corn Rhizosphere | MENRTTGTKAQNGNFAKQAEDIGEQAMQQLDQLREQASEIGERVVEFIKERPGTSLLIAAAAGYL |
| Ga0179593_11837911 | 3300026555 | Vadose Zone Soil | MENRTTGTKAKNGNFAAQAEDIGEQAMHQLDHLREQASELGERVVSFVKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0268266_116113532 | 3300028379 | Switchgrass Rhizosphere | MENRVAGTKAKNGNFAHQAEEIGEQAMQQLDALREQAGEIGERVISFVKERPGTSLLIAAAAGYLIGRIV |
| Ga0222748_11380451 | 3300029701 | Soil | ESRVSGAKAKNGNFTQHAEEIGEQAMEQLDHLREQAGELGERVVAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0222748_11381392 | 3300029701 | Soil | TGGIKTANGSFTAHAEDLGEQAMAQIDRLREQAGEVSERVVGFIKERPGTSLLIAAAAGYLIGRMLRS |
| Ga0308189_103875911 | 3300031058 | Soil | EEGRMENRTMGTSKTGNGNFTQKAEEIGEQAMQQLDNLREQASEIGDRVVGFIKERPGTSLLIAAAAGYFIGRILRS |
| Ga0308197_103497341 | 3300031093 | Soil | DDEEGRMENRTMGTSKTGNGNFTQKAEEIGEQAMQQLDNLREQASEIGDRVVGFIKERPGTSLLIAAAAGYFIGRILRS |
| Ga0335076_110202653 | 3300032955 | Soil | MQNKTTSGSGIRASNGNFTEQAEDLGQRAMEQLDELRAQAGEVGERVIAFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0316624_100449583 | 3300033486 | Soil | MENRTTGTKAKNGNFAQQAEDVGDQAMQQLDHLREQAGELGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0316628_1024939071 | 3300033513 | Soil | MENRTTGRAKNGGFAQQAEDLGDQAMQQLDHLREQASELGERVVEFIKERPGTSLLIAAAAGYLIGRIVRS |
| Ga0316628_1037693062 | 3300033513 | Soil | MENRTSGSARGPNGDVARQAEEIGEQAMAELDHLRERAAAIGDRVVGFIKERPGTSLLIAAAAGYLIGRVVRS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |