Metagenome Family F083541

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083541
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	105 residues
Representative Sequence	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADPYWGLS
Number of Associated Samples	79
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.43 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	95.54 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.821 % of family members)
Environment Ontology (ENVO)	Unclassified (79.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (56.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.73% β-sheet: 18.94% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01152	Bac_globin	4.46
PF13561	adh_short_C2	2.68
PF13618	Gluconate_2-dh3	1.79
PF01370	Epimerase	1.79
PF03466	LysR_substrate	1.79
PF00248	Aldo_ket_red	0.89
PF02805	Ada_Zn_binding	0.89
PF00171	Aldedh	0.89
PF00378	ECH_1	0.89
PF01035	DNA_binding_1	0.89
PF07859	Abhydrolase_3	0.89
PF00903	Glyoxalase	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	4.46
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.89
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.89
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.89
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.89
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	0.89
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.89
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.71 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.71 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	2.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.71 %
Roseovarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius	2.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.71 %
Roseovarius aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius aestuarii	2.68 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100495093	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005332\|Ga0066388_101694042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1118	Open in IMG/M
3300005437\|Ga0070710_10968105	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300009826\|Ga0123355_10478867	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300010047\|Ga0126382_11280353	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300010049\|Ga0123356_10472525	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300010359\|Ga0126376_13081803	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300010376\|Ga0126381_103690703	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010398\|Ga0126383_11209167	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300015371\|Ga0132258_13311412	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300016270\|Ga0182036_10264130	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300016270\|Ga0182036_10870503	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300016270\|Ga0182036_11089939	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300016319\|Ga0182033_11295039	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300016319\|Ga0182033_11741668	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300016341\|Ga0182035_10407645	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300016357\|Ga0182032_10115958	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300016357\|Ga0182032_10228852	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300016357\|Ga0182032_11320427	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300016371\|Ga0182034_10255273	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300016371\|Ga0182034_11279636	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300016387\|Ga0182040_11057763	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300016404\|Ga0182037_10097286	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300016404\|Ga0182037_10212632	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300016404\|Ga0182037_10253313	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300016404\|Ga0182037_10277597	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300016422\|Ga0182039_10183054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius aestuarii	1656	Open in IMG/M
3300016445\|Ga0182038_10186583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius aestuarii	1619	Open in IMG/M
3300017926\|Ga0187807_1023245	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300017942\|Ga0187808_10139951	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300020579\|Ga0210407_10042264	All Organisms → cellular organisms → Bacteria → Proteobacteria	3394	Open in IMG/M
3300020580\|Ga0210403_10573143	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300021171\|Ga0210405_10594346	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300021404\|Ga0210389_10923873	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300021420\|Ga0210394_11324654	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300021441\|Ga0213871_10266403	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300021559\|Ga0210409_10566688	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300021560\|Ga0126371_13499574	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300025939\|Ga0207665_10378149	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300031543\|Ga0318516_10303088	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300031543\|Ga0318516_10704052	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031544\|Ga0318534_10344829	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300031544\|Ga0318534_10624568	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031544\|Ga0318534_10830806	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031545\|Ga0318541_10394058	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031573\|Ga0310915_10347832	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300031573\|Ga0310915_10609895	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300031573\|Ga0310915_10770886	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031640\|Ga0318555_10535586	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031640\|Ga0318555_10658863	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031640\|Ga0318555_10677426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	558	Open in IMG/M
3300031668\|Ga0318542_10240834	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031680\|Ga0318574_10645697	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031682\|Ga0318560_10477345	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031682\|Ga0318560_10766023	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031718\|Ga0307474_10051549	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300031719\|Ga0306917_10250491	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300031723\|Ga0318493_10347788	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031744\|Ga0306918_10052109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → Roseovarius aestuarii	2722	Open in IMG/M
3300031744\|Ga0306918_11463932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	522	Open in IMG/M
3300031744\|Ga0306918_11509411	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031747\|Ga0318502_10336895	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300031747\|Ga0318502_10456758	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300031747\|Ga0318502_10494858	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031747\|Ga0318502_10506749	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300031754\|Ga0307475_10813177	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031763\|Ga0318537_10145955	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300031769\|Ga0318526_10177849	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300031770\|Ga0318521_10223158	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300031771\|Ga0318546_10160219	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300031771\|Ga0318546_10967575	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031777\|Ga0318543_10274365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	753	Open in IMG/M
3300031781\|Ga0318547_10272688	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300031782\|Ga0318552_10642908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	541	Open in IMG/M
3300031792\|Ga0318529_10129883	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300031792\|Ga0318529_10324922	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031860\|Ga0318495_10245501	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300031879\|Ga0306919_10181852	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031880\|Ga0318544_10059685	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300031890\|Ga0306925_11946014	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031890\|Ga0306925_11949076	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031896\|Ga0318551_10109711	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300031896\|Ga0318551_10824401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	540	Open in IMG/M
3300031910\|Ga0306923_10398615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1566	Open in IMG/M
3300031941\|Ga0310912_10557523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	892	Open in IMG/M
3300031941\|Ga0310912_10867893	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031942\|Ga0310916_10557801	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031942\|Ga0310916_10652885	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300031942\|Ga0310916_10957216	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031945\|Ga0310913_10055321	All Organisms → cellular organisms → Bacteria → Proteobacteria	2602	Open in IMG/M
3300031945\|Ga0310913_10263470	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300031946\|Ga0310910_10773912	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031954\|Ga0306926_12964531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	508	Open in IMG/M
3300032008\|Ga0318562_10874499	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300032035\|Ga0310911_10376205	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300032042\|Ga0318545_10192181	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300032042\|Ga0318545_10203092	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300032043\|Ga0318556_10510990	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300032044\|Ga0318558_10486396	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300032044\|Ga0318558_10661110	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300032055\|Ga0318575_10139415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1200	Open in IMG/M
3300032059\|Ga0318533_10209970	All Organisms → cellular organisms → Bacteria → Proteobacteria	1397	Open in IMG/M
3300032060\|Ga0318505_10437216	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300032064\|Ga0318510_10206654	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300032067\|Ga0318524_10134100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1245	Open in IMG/M
3300032067\|Ga0318524_10613769	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300032068\|Ga0318553_10210362	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300032076\|Ga0306924_10800765	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300032089\|Ga0318525_10384922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	719	Open in IMG/M
3300032091\|Ga0318577_10295284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	775	Open in IMG/M
3300032094\|Ga0318540_10077472	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300033289\|Ga0310914_10959028	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.43%
Host-Associated	Host-Associated	3.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.64%
Aquatic	Environmental → Aquatic	1.79%
Arthropoda	Host-Associated → Arthropoda	1.79%
Plants	Host-Associated → Plants	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.64%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	86.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	59.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1004950931	3300004479	Soil	LLLVPREPCIRVKALIHSVGTALLLIAGYTPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYD
Ga0066388_1016940422	3300005332	Tropical Forest Soil	LLLVPRESRIRVNALIHSAAMALLLIGAYAPRAESAESLCQSCELQIGIGETYHFWGSTGGVVIPITLNWSDSRYELGLFRLSRRQILYDAHYPNGR
Ga0070710_109681051	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLRKPRSHVKALIHSAATALLLIAACVPRFASADSLCESCELQIGIGETYQFWGSTGGVVIPITLNWSDSRYELGLFRLSRRQVLYSARYPDGRVMADPYWGLSLSRRWRIFSRGPVKG
Ga0123355_104788672	3300009826	Termite Gut	MLTAGASLRLSKRKDQVLLLAHREPGICVKALVQSAAIAVLLGAAWLPRLANAQSLCQSCEVQIGIGITYHFWAATDGVVLPVTLDWSDGRYELGLFRLSTRQILYDA
Ga0126382_112803532	3300010047	Tropical Forest Soil	LVLVPRELPIRIKALIHGAAMALLLVGAYAPRFASAESLCESCELQIGIGETYHFWGTTGGVVLPITLNWSDSRYELGLFRLSKRQILYDAHYPNGHLMADPYWGLSLSRRWRIFTRGPVKGFFGFGI
Ga0123356_104725252	3300010049	Termite Gut	MLTAGASLRLSKRKDQVLLLAHREPGICVKALVQSAAIAVLLGAAWLPRLANAQSLCQSCEVQIGIGITYHFWAATDGVVLPVTLDWSDGRYELGLFRLSTRQILYDAHYPDGRLMANPYWGISLSRRWRLF
Ga0126376_130818031	3300010359	Tropical Forest Soil	MPREPRIRVKALIHSVGMALLLIAGYAPGFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYDAHYPSGRLMADPYWGLSLSRRWQI
Ga0126381_1036907032	3300010376	Tropical Forest Soil	MPREPRIRVTALIHSVGIALLLIAGYAPRSGSAASLCESCELQIGIGDTYHFWGTTGGVVLPVTLNWSDSRYELGLFRLSRRQILYDAHYPSGRLMADPYW
Ga0126383_112091671	3300010398	Tropical Forest Soil	MPREPRIRVKALIHSVGMALLLIAGYAPGFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYDAHYPSGRLMADPYWGLSLSRRWQIFAR
Ga0132258_133114121	3300015371	Arabidopsis Rhizosphere	MRVKGLIHSVTVGLLLSAGYAPRLATAQSLCESCELQMGIGETYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYDEHYPNGRLMADPYWDCRSHAAGVQDG*
Ga0182036_102641303	3300016270	Soil	VPREPCIRVKVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSTRQILYDQHSPYGRLMAHPYWGLSLSRRWRIFTRGPVK
Ga0182036_108705031	3300016270	Soil	LSLVPRKPRVRVAALIHSAAMALLLIAACVPRFASAESLCESCELQVGIGETYHFWGSTGGVVIPITLNWSDSRYELGLFRLSRRQIL
Ga0182036_110899391	3300016270	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHY
Ga0182033_112950391	3300016319	Soil	MSLIQRRAFRARELRIRAKALMHGAAVALLLITGYTPRFANAASLCESCELQLGIGETYHFWGATGGLVVPITLNWSDNRYELGFFRVSRRQILYDAHYPSGRLMADPYWGLS
Ga0182033_117416682	3300016319	Soil	VPREPCIRVNVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSSRQILYNAHS
Ga0182035_104076451	3300016341	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADP
Ga0182032_101159583	3300016357	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPSGRLMADPYWGLSLS
Ga0182032_102288523	3300016357	Soil	MPREPRIRVKTLSHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQILYDAHYP
Ga0182032_113204271	3300016357	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLKWSDGRYELGLFRLSTRQILYDAHYPSGHLMADPYWGLSLSRR
Ga0182034_102552733	3300016371	Soil	VTRQPRSCIKAFIHSSVTALLLVGAYAPRLAGAESLCESCELQIGIGSTYHFWGSTGGVVLPITLNWSDSRYELGLFRLSTRQTLYDPHYPYGRLMAEPYWGLSLSRRWRIFTRGPV
Ga0182034_112796362	3300016371	Soil	VLRERRIPVKALIHGAVMAVLVSGGCLPRFARAQSLCESCEVQIGIGETYHFWGTTGGVVLPITLTWSDSRYELGLFRLSTRQILYD
Ga0182040_110577631	3300016387	Soil	VPREPCIRVKVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSTRQILYDQHSPYGRLMAHPYWGLSLSRRWRIFTRGPVKGFFG
Ga0182037_100972861	3300016404	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYDAHYPSGHLMANPYWGLSLSR
Ga0182037_102126323	3300016404	Soil	MPREPRIRVKTLSHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYWGMS
Ga0182037_102533131	3300016404	Soil	VLRERRIPVKALIHGAVMAVLVSGGCLPRFARAQSLCESCEVQIGIGETYHFWGTTGGVVLPITLTWSDSRYELGLFRLSTRQILYDAHYQQGRLMADPY
Ga0182037_102775973	3300016404	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYWGMS
Ga0182039_101830543	3300016422	Soil	MPREPRIRVKTLSHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQI
Ga0182038_101865831	3300016445	Soil	MPREPRIRVKTLSHSVGTALLLLAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADPYWGLSLTRRWKIFTRGP
Ga0187807_10232452	3300017926	Freshwater Sediment	LLPVRREPRSRVKALIQSAGISLLVGASYVPGLVSAQSLCESCEVQIGIGDTYHFWDTTGGVVLPVTLNWSDNRYELGLFRLSTRQILYDAHYRSGHLMANQGLLCARLLT
Ga0187808_101399511	3300017942	Freshwater Sediment	SYVDSWSTSPCHNRQREALLPVRREPRSRVKALIQSAGISLLVGASYVPGLVSAQSLCESCEVQIGIGDTYHFWDTTGGVVLPVTLNWSDNRYELGLFRLSTRQILYDAHYRSGHLMANQGLLCARLLT
Ga0210407_100422645	3300020579	Soil	VRREPRTRVKALIQGAGIALVLGAGYVSGFASAQALCESCEVQIGIGETYHFWGTTGGVVLPVTLDWSDNRYELGLFRISSRQILYDAHYRNGHLMANPYWGLSVSRRWRLFDRGSGQGILRLRNRGKDRIGPT
Ga0210403_105731431	3300020580	Soil	VRREPRTRVKALIQGAGIALVLGAGYVSGFASAQALCESCEVQIGIGETYHFWGTTGGVVLPVTLDWSDNRYELGLFRISSRQILYDAHYRNGHLMANPYWGLSVSRRWRLFDRGPVRGFLRLRNRGKDRIGPT
Ga0210405_105943462	3300021171	Soil	VRREPRTRVKALIQGAGIALVLGAGYVSGFASAQALCESCEVQIGIGETYHFWGTTGGVVLPVTLDWSDNRYELGLFRISSRQILYDAHYRNGHLM
Ga0210389_109238731	3300021404	Soil	VRREPRTRVKALIQGAGIAVVLGAGYVSGFASAQALCESCEVQIGIGETYHFWGTTGGVVLPVTLDWSDNRYELGLFRISSRQI
Ga0210394_113246541	3300021420	Soil	VRRGPRIRVALLLCAACVPRLLNAQSLCESCELQVGIGDTYHFWGTTDGVVLPVTLNWSDARYEFGLFRISTRQILYDAHYRYGRLMADPYWGLSLSRRWRLFDRGPVRGFF
Ga0213871_102664031	3300021441	Rhizosphere	VPREPRIGVKAHIRRTAIALLLSAGGAPQLASADSLCQSCELQIGIGETYHFWGTTGGVVLPVLLDWGDSRYEFGLFRLSSRQILYDAHSPYGRLMADPYWGLSLSRRWQI
Ga0210409_105666882	3300021559	Soil	VRREPRIRVKALIQGAGIALVLGAGYVSGFASAQALCESCEVQIGIGETYRFWGTTGGVVLPVTLDWSDNRYELGLFRISSRQILYDAHYRNGHLMAN
Ga0126371_134995741	3300021560	Tropical Forest Soil	MPCEPRIRVKALIHSVGMALLLIAGNAPRLGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYDAHYRNGRLMADPYWGLSLSRRWQIF
Ga0207665_103781491	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLRKPRSHVKALIHSAATALLLIAACVPRFASADSLCESCELQIGIGETYHFWGTTGGVVLPITLKWSDSRYELGLFRLSSRQILYDTHYQNGHLMAEPYWGLSLSRRWQIFTRGPVRGSAAARRSPRAAPAAGRSR
Ga0318516_103030881	3300031543	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRVMADPYWGLSLSRRWQIFT
Ga0318516_107040522	3300031543	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLKWSDGRYELGLFRLSTRQILYDAHYPKGHMMAGPYW
Ga0318534_103448291	3300031544	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRVMADPYWGLSLSRRWQIF
Ga0318534_106245681	3300031544	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADPYWGLSLSRRWQIFTRGPVR
Ga0318534_108308061	3300031544	Soil	MPRQPRSRVKALIYSVGMSLLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDTHYPNGHLMADPYWGLSLSRRWQ
Ga0318541_103940582	3300031545	Soil	VRRQPRRRVTALVQSAAIALLVGVGYAPRFASAQSLCESCEVQAGIGATYHFWGTTGGVVLPVTLNWSDSRYELGLFRISTQQTLYDAH
Ga0310915_103478321	3300031573	Soil	VPREPRIRVKALIYSVAVTLLLSAAYVPRLAGAASLCETCELQIGIGDTYHFWGTTGGVVFPITLNWSDGRYELGLFRLS
Ga0310915_106098951	3300031573	Soil	MPRQPRSRVKALIYSVGMSLLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDTHYPNGHLMADPYWGLSLSRRWQIFTRG
Ga0310915_107708862	3300031573	Soil	VPREPCIRVKVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSTRQILYDQHSPY
Ga0318555_105355861	3300031640	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGETYHFWGSTGGVVIPITLSWSDSRYELGLFRLSSRQILYDAHYPNGHLMADPYWGLSLSRRWRIFTRGPVKGFFGFG
Ga0318555_106588631	3300031640	Soil	VRRQPRRRVTALVQSAAIALLVGVGYAPRFASAQSLCESCEVQAGIGATYHFWGTTGGVVLPVTLNWSDSRYELGLFRISTQQTLYDAHYRYGRVVADPY
Ga0318555_106774262	3300031640	Soil	LFLVTRQPRSCIKAFIHSSVTALLLVGAYAPRLAGAESLCESCELQIGIGSTYHFWGSTGGVVLPITLNWSDSRYELGLFRLSTRQTLYDPHYPYGRLMAEPYWGL
Ga0318542_102408342	3300031668	Soil	VTRQPRSCIKAFIHSSVTALLLVGAYAPRLAGAESLCESCELQIGIGSTYHFWGSTGGVVLPITLNWSDSRYELGLFRLSTRQTL
Ga0318574_106456972	3300031680	Soil	LSLVPRKPRVRVAALIHSAAMALLLIAACVPRFASAESLCESCELQVGIGETYHFWGSTGGVVIPITLNWSDSRYELGLFRLSRRQILYSPRYPDGRVMADPY
Ga0318560_104773451	3300031682	Soil	MPREPRIRVKTLSHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPY
Ga0318560_107660232	3300031682	Soil	VHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGHLMANPYWGVSLSRRWRLFSRGP
Ga0307474_100515494	3300031718	Hardwood Forest Soil	LLVRRPPHIRVKALWQSAAIALLLCAGCVPRLLSAQSLCESCELQIGIGDTYHFWGTTGGVVFPVTLDWSDGRYEFGVF
Ga0306917_102504911	3300031719	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRVMADPYWGLSLSRRWQIFTRGPVKGFFG
Ga0318493_103477882	3300031723	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLKWSDGRYELGLFRLSTRQILYDAHYPSGHLMADPYWGLSLSRRWQIFARGPVR
Ga0306918_100521091	3300031744	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADPY
Ga0306918_114639321	3300031744	Soil	LFPVHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGH
Ga0306918_115094111	3300031744	Soil	VQSAAIALLVGVGYAPRFASAQSLCESCEVQAGIGATYHFWGTTGGVVLPVTLNWSDSRYELGLFRISTQQTLYDAHYRYGRV
Ga0318502_103368951	3300031747	Soil	MPREPRIRVKTLSHSVGTALLLLAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYW
Ga0318502_104567582	3300031747	Soil	VRRQPRRRVTALVQSAAIALLVGVGYAPRFASAQSLCESCEVQAGIGATYHFWGTTGGVVLPVTLNWSDSRYELGLFRIS
Ga0318502_104948582	3300031747	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLKWSDGRYELGLFRLSTRQILYDAHY
Ga0318502_105067492	3300031747	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRVMADPYWGLSLSRRWQI
Ga0307475_108131772	3300031754	Hardwood Forest Soil	MQRAAIALILCTACVPRLLNAQSLCESCELQVGIGDTYHFWGTTDGVVLPVTLNWSDARYEFGLFRISTRQILYDAHYRYGRLMADPYWGLSLS
Ga0318537_101459551	3300031763	Soil	VPREPCIRVKVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSTRQILYDQHSPYGRLMAHPYWGLSLSRRWR
Ga0318526_101778491	3300031769	Soil	MPREPRIRVKTLSHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYWGMSLSRRWQIFTRGPVR
Ga0318521_102231581	3300031770	Soil	VLRERRIPVKALIHGAVMAVLVSGGCLPRFARAQSLCESCEVQIGIGETYHFWGTTGGVVLPITLTWSDSRYELGLFRLSTRQILYDAHYQQGRLMADPYWGLSFSR
Ga0318546_101602191	3300031771	Soil	MPREPRIRVKTLSHSVGTALLLLAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYWGMSLSRRWQIFTRGPVR
Ga0318546_109675751	3300031771	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRVMADPYWGLS
Ga0318543_102743652	3300031777	Soil	VHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGHLMANPYWGVSLSRRWR
Ga0318547_102726882	3300031781	Soil	MPREPRIRVKTLSHSVGTALLLLAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILY
Ga0318552_106429081	3300031782	Soil	LFPVHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGHLMANPYWGV
Ga0318529_101298831	3300031792	Soil	MPREPRIRVKTLSHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYWGMSLSRRWQI
Ga0318529_103249222	3300031792	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLKWSDGRYELGLFRLSTRQILYDAHYPSGHLMADPYWGLSLSRRWQIFARGP
Ga0318495_102455012	3300031860	Soil	VPREPCIRVKVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSTRQILYDQHSPYG
Ga0306919_101818521	3300031879	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLKWSDGRYELGLFRLSTRQILYD
Ga0318544_100596851	3300031880	Soil	MPREPRIRVKTLSHSVGTALLLLAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADPYWGLSLSR
Ga0306925_119460141	3300031890	Soil	MPRQPRSRVKALIYSVGMSLLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDTHYPNGHLMADPYWGL
Ga0306925_119490761	3300031890	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYWGMSLSRRWQIFTRGP
Ga0318551_101097113	3300031896	Soil	VPREPRIRVKALIYSVAVTLLLSAAYVPRLAGAASLCETCELQIGIGDTYHFWGTTGGVVFPITLNWSDGRYELGLFRLSSRQILY
Ga0318551_108244011	3300031896	Soil	MRVHTLIRNVGVALLLILGYAPGLSSAESLCESCELQIGIGETYHFWGTTGGVVLPITLNWDESRYELGLFRLSRRQILYDAHSPSGRLLADPYWGLS
Ga0306923_103986151	3300031910	Soil	VRRQPRRRVKALVQSAAIALLVGVGYAPRFASAQSLCESCEVQAGIGATYHFWGTTGGVVLPVTLNWSDSRYELGLFRISTQQTLY
Ga0310912_105575233	3300031941	Soil	VPREPRIRVKALIYSVAVTLLLSAAYVPRLAGAASLCETCELQIGIGDTYHFWGTTGGVVFPITLNWNDGRYELGLFRLSSRQILYDAH
Ga0310912_108678931	3300031941	Soil	MPRQPRSRVKALIYSVGMSLLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDTHYPNGHLMA
Ga0310916_105578012	3300031942	Soil	LSLVPRKPRVRVAALIHSAAMALLLIAACVPRFASAESLCESCELQVGIGETYHFWGSTGGVVIPITLNWSDSRYELGLFRLSRRQILYSPRYPDGRVMADPYWGL
Ga0310916_106528852	3300031942	Soil	VPREPCIRVKVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSTRQILYDQHSPYGRLM
Ga0310916_109572162	3300031942	Soil	MEALLLVSREPHIPVKDLFHSAIMTLLLIAAHAPRFASAESLCESCELQIGIGETYHFWGSTGGVVIPITLSWSDSRYELGLFRLSSRQILYDAHYPNGHLMADPYWGLSLSRRWRIFTRGPVKGFF
Ga0310913_100553214	3300031945	Soil	VHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGHLMANPYWGMSLSRRWRLFSRGPVRGF
Ga0310913_102634702	3300031945	Soil	MPREPRIRVKTLSHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPIALNWSDSRYELGLFRLSTRQILYDAHYPKGHMMAGPYWGMSLSRRWQIFTRGPVRGFFGFGIAA
Ga0310910_107739121	3300031946	Soil	MSLIQRRAFRARELRIRAKALMHGAAVALLLITGYTPRFANAASLCESCELQIGIGETYHFWGPTGGLVIPITLNWSDNRYELGFFRVSRRQILYDAHYPSGRLMADPYWGLSLSRRWRLFTRGPV
Ga0306926_129645312	3300031954	Soil	VPRKPHIRVKALIHSAAMALPLIVACGPRVAGAESLCESCELQIGIGETYHFWGSTGGVVIPITLDWSDNRYELGLFRLSRRQILYDTHYPN
Ga0318562_108744991	3300032008	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRVMADPY
Ga0310911_103762051	3300032035	Soil	VRRQPRRRVTALVQSAAIALLVGVGYAPRFASAQSLCESCEVQAGIGATYHFWGTTGGVVLPVTLNWSDSRYELGLFRISTQQTLYDAHYRYGRVVADPYWGLSLSRRWRLFDRGPV
Ga0318545_101921811	3300032042	Soil	VLRERRIPVKALIHGAVMAVLVSGGCLPRFARAQSLCESCEVQIGIGETYHFWGTTGGVVLPITLTWSDSRYELGLFRLSTRQILYDAHYQQGRLMADPYWGLSFSRRWRLFSRGPVRGFFGF
Ga0318545_102030921	3300032042	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRVMADPYWGLSLSRRW
Ga0318556_105109901	3300032043	Soil	LLLVPREPRIRVKALIHSAAIALLLSVGYAPRFASAQSLCESCELQIGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDTHSPYGRLMADPYWGLS
Ga0318558_104863961	3300032044	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSESRYELGLFRLSRRQILYDAHSPNGRV
Ga0318558_106611101	3300032044	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADPYWGLS
Ga0318575_101394152	3300032055	Soil	VVLVSRGPRIRVVKALIHSVGMALLLIAGFSPRFAGAESLCESCELQIGIGDTYHFWGTTGGVVFPLTLNWSDGRYELGLFRLSSRQMLYDAHSP
Ga0318533_102099703	3300032059	Soil	VRRQPRRRVTALVQSAAIALLVGVGYAPRFASAQSLCESCEVQAGIGATYHFWGTTGGVVLPVTLNWSDSRYELGLFR
Ga0318505_104372161	3300032060	Soil	LFLVTRQPRSCIKAFIHSSVTALLLVGAYAPRLAGAESLCESCELQIGIGSTYHFWGSTGGVVLPITLNWSDSRYELGLFRLSTRQTLYDPHYPYGRLMAEPYWGLSLSRRWRIFT
Ga0318510_102066542	3300032064	Soil	VTRQPRSCIKAFIHSSVTALLLVGAYAPRLAGAESLCESCELQIGIGSTYHFWGSTGGVVLPITLNWSDSRYELGLFRLSTRQTLYDPHYPYGRLMAEPYWGLSLSRR
Ga0318524_101341002	3300032067	Soil	VHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGHLMANPYWGVSLSRRWRL
Ga0318524_106137691	3300032067	Soil	LLFVPREPHIRVNAFIRSVGVALLLIVGNAPRLSNAESLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSTRQILYDAHSPRGRVMADPYWGLSLSRRWHLFTRGPVRGFVGFG
Ga0318553_102103621	3300032068	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYGTHYPRGRLMADPHWGMSVSRRWRKFTRG
Ga0306924_108007653	3300032076	Soil	VPREPCIRVKVLIYSVAVTLLLSAGYAPRLASAASLCENCELQIGIGATYHFWGSTGGVVLPISLNWSDGRYELGLFRLSTRQ
Ga0318525_103849222	3300032089	Soil	VHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGHLMAN
Ga0318577_102952841	3300032091	Soil	VHRAPRIGVKALIQSAAIALLLGVSYMPRVGSAQSLCDSCELQLGIGETYHFWGSTGGVVLPVTLNWSDGRYELGLFRLSSRQILYDAHYPTGHL
Ga0318540_100774723	3300032094	Soil	MPREPRIRVKALIHSVGMALLLIAGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPITLNWSDSRYELGLFRLSRRQILYNAHYPTGRLMADPYWGLSLSRRWQIFT
Ga0310914_109590281	3300033289	Soil	MPREPCIRVKAFIHSAGMALLLIVGYAPRFGSAASLCESCELQIGIGDTYHFWGTTGGVVLPVTLNWSDSRYELGHFRLSRRQILYDAHYPRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences