Metagenome / Metatranscriptome Family F083449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083449
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	85 residues
Representative Sequence	MIALATVVHMLRSRRFYARVITVVVAVRALGQIGKENQASTMARLAAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAAKSNRT
Number of Associated Samples	86
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.63 %
% of genes near scaffold ends (potentially truncated)	39.82 %
% of genes from short scaffolds (< 2000 bps)	85.84 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.469 % of family members)
Environment Ontology (ENVO)	Unclassified (38.938 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.363 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.38% β-sheet: 0.00% Coil/Unstructured: 31.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF09995	MPAB_Lcp_cat	7.08
PF06305	LapA_dom	7.08
PF02036	SCP2	6.19
PF05532	CsbD	3.54
PF00929	RNase_T	2.65
PF03976	PPK2	2.65
PF12697	Abhydrolase_6	1.77
PF13185	GAF_2	1.77
PF15420	Abhydrolase_9_N	1.77
PF00580	UvrD-helicase	1.77
PF00392	GntR	1.77
PF00106	adh_short	1.77
PF13538	UvrD_C_2	0.88
PF00689	Cation_ATPase_C	0.88
PF13424	TPR_12	0.88
PF00498	FHA	0.88
PF13463	HTH_27	0.88
PF03861	ANTAR	0.88
PF02371	Transposase_20	0.88
PF13302	Acetyltransf_3	0.88
PF03649	UPF0014	0.88
PF01636	APH	0.88
PF00440	TetR_N	0.88
PF00196	GerE	0.88
PF13191	AAA_16	0.88
PF13727	CoA_binding_3	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	7.08
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	3.54
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	2.65
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	1.77
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	1.77
COG3973	DNA helicase IV	Replication, recombination and repair [L]	1.77
COG0390	ABC-type iron transport system FetAB, permease component	Inorganic ion transport and metabolism [P]	0.88
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.21 %
Unclassified	root	N/A	47.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.21 %
Unclassified	root	N/A	47.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.33 %
Unclassified	root	N/A	47.79 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.90 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.13 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.40 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.54 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.54 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.54 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.65 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	0.88 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.88 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.65 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2.65 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.88 %
Leekyejoonella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella	0.88 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples	2.65 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.88 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Ericales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → Ericales	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Theaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → Ericales → Theaceae	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.79 %
uncultured Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	2.65 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Gordonia	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → Ericales → Theaceae → Gordonia	0.88 %
Rhodococcus sp. MTM3W5.2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	0.88 %
Leekyejoonella antrihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig87822	Not Available	634	Open in IMG/M
2189573004\|GZGWRS402FS6W5	Not Available	509	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100604221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1407	Open in IMG/M
3300000956\|JGI10216J12902_109129982	Not Available	1899	Open in IMG/M
3300004091\|Ga0062387_100843187	Not Available	687	Open in IMG/M
3300004092\|Ga0062389_102604719	Not Available	672	Open in IMG/M
3300004479\|Ga0062595_101126521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	689	Open in IMG/M
3300005332\|Ga0066388_100511061	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300005332\|Ga0066388_101320801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300005332\|Ga0066388_102048467	Not Available	1028	Open in IMG/M
3300005434\|Ga0070709_10304656	Not Available	1164	Open in IMG/M
3300005436\|Ga0070713_100936931	Not Available	834	Open in IMG/M
3300005444\|Ga0070694_101553001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300005617\|Ga0068859_102272431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300005764\|Ga0066903_101136764	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300005764\|Ga0066903_101861070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1152	Open in IMG/M
3300005983\|Ga0081540_1150167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	921	Open in IMG/M
3300006059\|Ga0075017_100073635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2337	Open in IMG/M
3300009101\|Ga0105247_10245081	Not Available	1223	Open in IMG/M
3300009148\|Ga0105243_11598896	Not Available	678	Open in IMG/M
3300009162\|Ga0075423_10065708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3759	Open in IMG/M
3300009545\|Ga0105237_11006535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300009792\|Ga0126374_10042793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2235	Open in IMG/M
3300009792\|Ga0126374_10212719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300009792\|Ga0126374_10224462	Not Available	1207	Open in IMG/M
3300009792\|Ga0126374_10824272	Not Available	711	Open in IMG/M
3300010043\|Ga0126380_10608289	Not Available	862	Open in IMG/M
3300010043\|Ga0126380_11053047	Not Available	689	Open in IMG/M
3300010046\|Ga0126384_10045840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2987	Open in IMG/M
3300010047\|Ga0126382_12238453	Not Available	527	Open in IMG/M
3300010048\|Ga0126373_10368478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1453	Open in IMG/M
3300010048\|Ga0126373_10890423	Not Available	954	Open in IMG/M
3300010154\|Ga0127503_10758389	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1826	Open in IMG/M
3300010358\|Ga0126370_10479076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Leekyejoonella → Leekyejoonella antrihumi	1045	Open in IMG/M
3300010359\|Ga0126376_10498411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → environmental samples → uncultured Pseudonocardia sp.	1127	Open in IMG/M
3300010359\|Ga0126376_11560426	Not Available	691	Open in IMG/M
3300010361\|Ga0126378_13317387	Not Available	511	Open in IMG/M
3300010366\|Ga0126379_10031078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4171	Open in IMG/M
3300010373\|Ga0134128_10037030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5702	Open in IMG/M
3300010373\|Ga0134128_12392470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	582	Open in IMG/M
3300010375\|Ga0105239_11821755	Not Available	705	Open in IMG/M
3300010398\|Ga0126383_10568870	Not Available	1201	Open in IMG/M
3300010398\|Ga0126383_10909672	Not Available	966	Open in IMG/M
3300010398\|Ga0126383_11416724	Not Available	785	Open in IMG/M
3300010398\|Ga0126383_11966806	Not Available	672	Open in IMG/M
3300011107\|Ga0151490_1178011	Not Available	546	Open in IMG/M
3300012198\|Ga0137364_10236770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1346	Open in IMG/M
3300012198\|Ga0137364_10339481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300012199\|Ga0137383_11177285	Not Available	552	Open in IMG/M
3300012200\|Ga0137382_10029216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3272	Open in IMG/M
3300012200\|Ga0137382_10917524	Not Available	631	Open in IMG/M
3300012201\|Ga0137365_10005838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9842	Open in IMG/M
3300012207\|Ga0137381_11043622	Not Available	704	Open in IMG/M
3300012208\|Ga0137376_10618159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300012211\|Ga0137377_10077217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3128	Open in IMG/M
3300012211\|Ga0137377_10205516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1891	Open in IMG/M
3300012350\|Ga0137372_10351815	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300012356\|Ga0137371_10017101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5571	Open in IMG/M
3300012356\|Ga0137371_10469249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300012359\|Ga0137385_10683983	Not Available	857	Open in IMG/M
3300012929\|Ga0137404_11239540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	686	Open in IMG/M
3300012971\|Ga0126369_10807053	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1021	Open in IMG/M
3300012971\|Ga0126369_12605011	Not Available	590	Open in IMG/M
3300013307\|Ga0157372_10912530	Not Available	1019	Open in IMG/M
3300014968\|Ga0157379_10411563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1244	Open in IMG/M
3300014969\|Ga0157376_11272173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	765	Open in IMG/M
3300015372\|Ga0132256_103401843	Not Available	535	Open in IMG/M
3300016294\|Ga0182041_11366395	Not Available	649	Open in IMG/M
3300017947\|Ga0187785_10021454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2287	Open in IMG/M
3300017959\|Ga0187779_10318571	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → Ericales → Theaceae → Gordonia	998	Open in IMG/M
3300017966\|Ga0187776_10069964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2032	Open in IMG/M
3300017974\|Ga0187777_10431725	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300017999\|Ga0187767_10031045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1227	Open in IMG/M
3300018058\|Ga0187766_10443294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. MTM3W5.2	866	Open in IMG/M
3300018060\|Ga0187765_10141002	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300018060\|Ga0187765_10972449	Not Available	580	Open in IMG/M
3300021405\|Ga0210387_11128857	Not Available	683	Open in IMG/M
3300021560\|Ga0126371_13380780	Not Available	539	Open in IMG/M
3300025928\|Ga0207700_11801369	Not Available	538	Open in IMG/M
3300026088\|Ga0207641_10185343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1909	Open in IMG/M
3300027560\|Ga0207981_1072762	Not Available	631	Open in IMG/M
3300031170\|Ga0307498_10312416	Not Available	592	Open in IMG/M
3300031170\|Ga0307498_10356695	Not Available	563	Open in IMG/M
3300031231\|Ga0170824_112256281	Not Available	559	Open in IMG/M
3300031231\|Ga0170824_119919605	Not Available	523	Open in IMG/M
3300031474\|Ga0170818_115514383	Not Available	523	Open in IMG/M
3300031543\|Ga0318516_10497247	Not Available	700	Open in IMG/M
3300031544\|Ga0318534_10880949	Not Available	502	Open in IMG/M
3300031713\|Ga0318496_10239910	Not Available	999	Open in IMG/M
3300031751\|Ga0318494_10160078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300031751\|Ga0318494_10723783	Not Available	583	Open in IMG/M
3300031764\|Ga0318535_10202628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300031769\|Ga0318526_10338830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300031782\|Ga0318552_10683405	Not Available	523	Open in IMG/M
3300031945\|Ga0310913_10989396	Not Available	590	Open in IMG/M
3300032010\|Ga0318569_10519965	Not Available	554	Open in IMG/M
3300032041\|Ga0318549_10227336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300032043\|Ga0318556_10474622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300032091\|Ga0318577_10548299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300032261\|Ga0306920_101235043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300032770\|Ga0335085_10014970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11283	Open in IMG/M
3300032770\|Ga0335085_10075691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4436	Open in IMG/M
3300032770\|Ga0335085_12532931	Not Available	508	Open in IMG/M
3300032805\|Ga0335078_11300387	Not Available	830	Open in IMG/M
3300032828\|Ga0335080_10701764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1054	Open in IMG/M
3300032828\|Ga0335080_11159135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	779	Open in IMG/M
3300032892\|Ga0335081_10178332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2981	Open in IMG/M
3300032954\|Ga0335083_11179732	Not Available	594	Open in IMG/M
3300033158\|Ga0335077_10068859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4233	Open in IMG/M
3300033158\|Ga0335077_10723000	Not Available	1023	Open in IMG/M
3300033158\|Ga0335077_12098744	Not Available	522	Open in IMG/M
3300034818\|Ga0373950_0020724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1158	Open in IMG/M
3300034820\|Ga0373959_0025005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1171	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.73%
Host-Associated	Host-Associated	12.39%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Plants	Host-Associated → Plants	12.39%
Aquatic	Environmental → Aquatic	3.54%
Modeled	Engineered → Modeled	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.73%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Sediment	Environmental → Aquatic → Sediment	0.89%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.81%
Loam	Environmental → Terrestrial → Soil → Loam	7.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.77%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0822.00005380	2166559005	Simulated	MRVVALATVVHMLRSRRFYQRMITIAIAVGAIRRIGQENQASTMARLTAWDKRQVQRLERKAKRQGQVIKGSGQMMRSGAPRHLATKDRT
FG2_08030290	2189573004	Grass Soil	MRVVALATVVHMLRSRRFYQRMITVAIAVGALRKIGQENQASTMARLSAWDKRQVQRLERKAKRQGPVIKGAGRMMRSGAPRHLAAKDRT
INPhiseqgaiiFebDRAFT_1006042212	3300000364	Soil	YARVITVVVAVRALGQIGKENEASTMARLAAWDKRQVERLERKAKSQGRAVRGSVQMARSGAPRDLARKMNRT*
JGI10216J12902_1091299822	3300000956	Soil	MIALATVAHVLRSRRFYARVITVVVALRALGQIGKENQASTMARLAAWDKRQLERLERKAKAQGRAVKGTGQMIRSGAPRHLAARNNRT*
Ga0062387_1008431871	3300004091	Bog Forest Soil	MRLIALGAVAHILRSRRFYERVGIVAVVLAALGKISQENQASTRARLAAWDKRQVQRVERKAKAQGRAVKDTGQMMRSGVSGRMANMKDGT*
Ga0062389_1026047192	3300004092	Bog Forest Soil	LIALGAVAHILRSRRFYERVGIVAVVLAALGKISQENQASTRARLAAWDKRQVQRVERKAKAQGRAVKDTGQMMRSGVSGRMANMKDGT*
Ga0062595_1011265211	3300004479	Soil	MRVIALATVAHMLRSRRFYARLITVVVAARALGQIGKENQASTMARLTAWDKRQVKRFERKAKSQGRAIKGTVQMARSGAPRDLARKM
Ga0066388_1005110612	3300005332	Tropical Forest Soil	MRVIALATVMHILRSRRFYARLITIVVAVRALGQIGKENEASTMARLAAWDKRQVERLERKAKSQGRAVKGTLRMARSGAPRDLAAKMDRT*
Ga0066388_1013208013	3300005332	Tropical Forest Soil	MIALATVVHILRSRRFYQRVITVAIALGAIRQIGQEDQASTMARLSAWDKRQVQRLE
Ga0066388_1020484671	3300005332	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTANLARLSAWDKRQVERLEAKAKRQVRALKGDA*
Ga0070709_103046561	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIALAMVVHMLRSRRFYARVITVVVVVRALGQIGKENQASTMARLGAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAAKSNRT*
Ga0070713_1009369312	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIALATVVHMLRSRRFYARVITVVVAVRALGQIGKENQASTMARLEAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAAKSNRT*
Ga0070694_1015530011	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	IVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLEHRAQRHVRAIKGSAEMARSGGPRQLGTSNHRT*
Ga0068859_1022724311	3300005617	Switchgrass Rhizosphere	VIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENEASTMARLTAWDKRQVQRLERKAQRQVRAIKGSAEMARSGGPRQLGR*
Ga0066903_1011367642	3300005764	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTTNLARLSAWDKRQVERLENKAKRQVRAIKGDA*
Ga0066903_1018610702	3300005764	Tropical Forest Soil	MRVIALATLAHILRSRRFYARVITVVVAVRALGQIGQENQASTMARLAAWDKRQVERLERKAKSQGRAVKASVQMARSGATRDLATKMNRT*
Ga0081540_11501672	3300005983	Tabebuia Heterophylla Rhizosphere	MCVIALATLVHILRSRRFHARVITVVVAVRALGQIGKENEASTMARLAAWDKRQVERIQRKAKSQGRAVKGAVQMARSGAPRDLAAKMNRT*
Ga0075017_1000736352	3300006059	Watersheds	MIALAAVGHMLRSRRFYERVGTVAVAVAALGQIGQQNQASTRARLTAWDKRQVQRLERKAKAQGRTVKGAGQMMRSGVSGRMANMKDGT*
Ga0105247_102450812	3300009101	Switchgrass Rhizosphere	MRMIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLEHRAQRHVRAIKGSAEMARSGGPRQLGTSNHRT*
Ga0105243_115988961	3300009148	Miscanthus Rhizosphere	MRVIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENEASTMARLTAWDKRQVQRLERKAQRQVRAIKGSAEMARSGGPRQLGR*
Ga0075423_100657082	3300009162	Populus Rhizosphere	MRMIALATVAHMLRSRRFYARLITVVVAVRALGQLGHENQTTNLARLSAWDKRQVQRLERRAQRHVRAIKGSAEMARSGGPRRLGT*
Ga0105237_110065352	3300009545	Corn Rhizosphere	MRMIALATVAHMLRSRRFYARLITVVVAIRALGQIGHENQTTNLARLSAWDKRQVQRLEHRAQRHVRAIKGSAEMARSGGPRQLGTSNHRT*
Ga0126374_100427932	3300009792	Tropical Forest Soil	MRVIALATVVHILRSRRFYARLITIVVAVRALGQIGKENEASTMARLAAWDKRQVERLERKAKSQGRAVQGTLQMARSGAPRDLAAKMDRT*
Ga0126374_102127192	3300009792	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVIVAVRALGQIGHENQTNNLARLSAWDKRQVQRLENKAKRQVRAIKGDA*
Ga0126374_102244621	3300009792	Tropical Forest Soil	MVALAAVVHVLRSRRFHQRVITVVIALGALRRIGQENQASTMARLAAWDKRQVQRLERKARHQGRVIKGAGQMVRSGAPRHLTTRDGA*
Ga0126374_108242721	3300009792	Tropical Forest Soil	VRLIVLGAVVHMLRSHRFYQRLITVAIALGAVGQIGREDEASTMARLAAWDKRQIQRVERKAKRQGQVIRGAGQMMRSGAPRHLASRDRT*
Ga0126380_106082892	3300010043	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQASTMARLSAWDKRQVQRLESKAKRQVRAIKGSA*
Ga0126380_110530471	3300010043	Tropical Forest Soil	GSGPARRARAAGGGHRTAMRVIALATLVHMLRSRRFYARMITIVVAVRALGQIGQENQASTMARLTAWDKRQVERLQRKARSQGRAVKGTVQMARSGAPRDLAAKMNRT*
Ga0126384_100458403	3300010046	Tropical Forest Soil	MRVIALATVVHMLRSRRFYARLITVVVAVRALGQIGHENQASTVARLSAWDKRQVQRLESKAKRQVRAIKGSA*
Ga0126382_122384531	3300010047	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQASTMARLSAWDKRQVQRVESKAKRQVRAIKGSA*
Ga0126373_103684782	3300010048	Tropical Forest Soil	LIVLGAVVHMLRSRRFYQRLITVTIALGAVGQIGREDEASTMARLAAWDKRQIQRVERKAKRQGQVIKGAGQMMRSGAPRHLTGRDGT*
Ga0126373_108904232	3300010048	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTANLARLSAWDKRQVERLEAKAKRQVRAIKGDA*
Ga0127503_107583893	3300010154	Soil	MRMILLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQANTMERLTAWDKRQVQRLEHKAQRHVRAIKGSAEMARSGGPRQLGT*
Ga0126370_104790762	3300010358	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQASTVARLSAWDKRQVQRLESKAKRQVRAIKGSA*
Ga0126376_104984112	3300010359	Tropical Forest Soil	MRVIALATVVHILRSRRFYARLITIVVAVRALGQIGKENEASTMARLAAWDKRQVERLERKAKSQGRAVKGTLRMARSGAPRDLAAKMDRT*
Ga0126376_115604261	3300010359	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTANLARLSAWDKRQVQRFEAKAKRQVRAIKGDA*
Ga0126378_133173871	3300010361	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLENKAKRQVRAIKGDA*
Ga0126379_100310783	3300010366	Tropical Forest Soil	MVALATVVHMLRSRRFYQRLIIVVIALGALRRIGQENQASTMARLAAWDKRQVQRLERKAKHQGRVIKGAGQMMRSGAPRHLTTRDGA*
Ga0134128_100370306	3300010373	Terrestrial Soil	MRVIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLEHRAQRHVRAIKGSAEMARSGGPRQLGTSNHRT*
Ga0134128_123924702	3300010373	Terrestrial Soil	LATVAHMLRSRRFYARLITVVVAVRALGQIGHENEASTMARLTAWDKRQVQRLERKAQRQVRAIKGSAEMARSGGPRQLGR*
Ga0105239_118217551	3300010375	Corn Rhizosphere	MRMIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENEASTMARLTAWDKRQVQRLERKAQRQVRAIKGSAEMARSGGPRQLGR*
Ga0126383_105688702	3300010398	Tropical Forest Soil	MVALATVAHLLRSRRFYLRVITVVIALGALRRIGQENQASTMARLAAWDKRQVQRLERKAKHQGRVIKGAGQMMRSGAPRHLTTRDGA*
Ga0126383_109096721	3300010398	Tropical Forest Soil	QRLITVTIALGAVGQIGREDEASTMARLAAWDKRQIQRVERKAKRQGQVIRGAGQMMRSGAPRHLASRDRT*
Ga0126383_114167241	3300010398	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQASTVARLSAWDKRQVQRIEQKAQRHVRAIKGSAEMARSGAPRQLGR*
Ga0126383_119668061	3300010398	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTANLARLSAWDKRQVERFEAKAKRQVRAIKGDA*
Ga0151490_11780111	3300011107	Soil	MRVIALATVVHMLRSRRFYARLITIVVAVRALGQIGKENEAGTVARLAAWDKRQVERFERKAKSQGRAVKGTVQMARSGAPRDLARKMNR
Ga0137364_102367703	3300012198	Vadose Zone Soil	TVVHMLRSRRFYQRMITVAIAVGAIRRIGQENQASTMARLTAWDKRQIQRLERKANARAR
Ga0137364_103394812	3300012198	Vadose Zone Soil	MRMVSLATVVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTKARLSAWDKRQVQRVERKAKRQGQLVKGAGQMMRSGAPRHLATRDRT*
Ga0137383_111772851	3300012199	Vadose Zone Soil	AAMRVVALATVVHMLRSRRFYQRMITIAIAVGALRKIGQENQASTVARLSAWDKRQLQRLERKAKRQGPVIKGAGQMMRSGAPGHLAAKDRT*
Ga0137382_100292165	3300012200	Vadose Zone Soil	MRMVSLATVVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTMARLSAWDKRQVQRLERKAKRQGPVI*
Ga0137382_109175242	3300012200	Vadose Zone Soil	MRMVALATVVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTKARLSAWDKRQVQRVERKAKRQGQLVKGAGQMMRSGAPRHLAPRGGA*
Ga0137365_100058386	3300012201	Vadose Zone Soil	MRMVALATVVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTMARLSAWDKRQVQRVERKAKRQGQVIKGAGQMMRSGAPRDLAAKDRT*
Ga0137381_110436221	3300012207	Vadose Zone Soil	MRVVALATVVHMLRSRRFYQRMITIAIAVGALRRIGQENQASTMARLSAWDKRQLQRLERKAKRQGPVIKGAGQMMRSGAPGHLAAKDRT*
Ga0137376_106181592	3300012208	Vadose Zone Soil	AMRVVALATVVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTMARLSAWDKRQVQRVERKAKRQGQVVKGAGQMMRSGAPRHLATRDRT*
Ga0137377_100772172	3300012211	Vadose Zone Soil	MRMVALAAVVHMLRSRRFYQRMITVAIAVGAIRRIGQENQASTMARLTAWDKRQVQRLERKAKRQGQVIKGSGQMMRSGAPRHLATKDRT*
Ga0137377_102055163	3300012211	Vadose Zone Soil	MRVVALATVVHMLRSRRFYQRMITIAIAVGALRKIGQENQASTVARLSAWDKRQVQRLERKAKRQGPAIKGAGQMMRSGAPGHLAAKDRA*
Ga0137372_103518152	3300012350	Vadose Zone Soil	MRMVALATVVHILRSRRFYQRMITIAIAVGALRRIGQENQASTMARLSAWDKRQVQRVERKAKRQGQVIKGAGQMMRSGAPRDLAAKDRT*
Ga0137371_100171015	3300012356	Vadose Zone Soil	MRMVALATVVHMLRSRRFYQRMITIAIAVGALRRIGQENQASTMARLSAWDKRQVQRVERKAKRQGQVIKGAGQMMRSGAPRDLAAKDRT*
Ga0137371_104692491	3300012356	Vadose Zone Soil	VALATVVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTKARLSAWDKRQVQRVERKAKRQGQLVKGAGQMMRSGAPRHLATRDRT*
Ga0137385_106839831	3300012359	Vadose Zone Soil	MRMVALAAVVHMLRSRCFYQRMITVAIAVGAIRRIGQENQASTMARLTAWDKRQVQRLERKAKRQGQVIKGSGQMMRSGAPRHLATKDRT*
Ga0137404_112395402	3300012929	Vadose Zone Soil	MRVVALATVVHMLRSRRFYQRMITIAIAVGALRKIGQENQASTVARLSAWDKRQVKR
Ga0126369_108070532	3300012971	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTANLARLSAWDKRQVERLEAKAKRQVRALKG
Ga0126369_126050112	3300012971	Tropical Forest Soil	MRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTTNLARLSAWDKRQVERIEAKAKRQVRAIKGDA*
Ga0157372_109125303	3300013307	Corn Rhizosphere	MRMIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLEHRAQRHVRAIKGSAEMAR
Ga0157379_104115631	3300014968	Switchgrass Rhizosphere	MRMIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENEASTMARLTAWDKRQVQRLERKAQRQVRAIKGSAEMARSGGPRQLGTSNHRT*
Ga0157376_112721732	3300014969	Miscanthus Rhizosphere	ATVAHMLRSRRFYARLITVVVAVRALGQIGHENEASTMARLTAWDKRQVQRLERKAQRQVRAIKGSAEMARSGGPRQLGR*
Ga0132256_1034018431	3300015372	Arabidopsis Rhizosphere	MRMIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLERRAQRHVRAIKGSAEMARSGAARQLGT
Ga0182041_113663951	3300016294	Soil	MVALATVVHMLRSRRFYQRVITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHL
Ga0187785_100214542	3300017947	Tropical Peatland	MRVIALATVMHMLRSRRFYARLITVVVAVRALGQIGQENQASTMARLAAWDKRQVERFERKAKSQGRAVKGTVQMVRSGAPRDLARKMNRT
Ga0187779_103185712	3300017959	Tropical Peatland	MIALATVIHMLRSRRFYERLFGFAVVVAALARISQENRASTMARLAAWDKRQVERLEHKAKAHGRAIKGARQMARSGVSGRMASTRNGT
Ga0187776_100699642	3300017966	Tropical Peatland	MRVIALATLAHILRSRRFYARVITVVVAVRALGQIGQENQASTMARLAVWDKRQVERLERKAKSQGRAVKGTVQMARSGAPRDLARKMNGT
Ga0187777_104317252	3300017974	Tropical Peatland	MIALATVIHMLRSRRFYERLFGFAVVVAALARISKENQASTMARLAAWDKRQVERLEHKARANGRAVKGTGQMMRSRVSGRMASTKDMTG
Ga0187767_100310452	3300017999	Tropical Peatland	MIALATVIHMLRSRRFYERLFGFAVVVAALARISKENQASTMARLAAWDKRQVQRLERKAKSHGRAVKGTGQMMRSGVSGRMSKTTGRT
Ga0187766_104432941	3300018058	Tropical Peatland	AGSSHRPALRMIALATVIHMLRSRRFYERVFAFAVVLAALARISQENQASTMARLAAWDKRQVERLEHKARANGRAVKGTGQMMRSGVSGRMSKTTGRT
Ga0187765_101410022	3300018060	Tropical Peatland	MIALATVIHMLRSRRFYERVIAFVVVVAALARISQENRASTMARLAAWDKRQVQRFERKAKAHGRAVRGTGQMMRSRVSGRMASTKDMTG
Ga0187765_109724492	3300018060	Tropical Peatland	VVHMLRSRRFYQRVITVAIAVGAMGRIGQENQASTRARLVAWDKRQVQRLERKAKARVREVKDTEQLMRSEVSRRIAGTR
Ga0210387_111288571	3300021405	Soil	ARAAGGGHRTALRVIALAAVAHMLRSRRFYARIVTVVIAVRALGQIGQENQASTMARLSAWDKRQVERLERKAKSQGRAVTASVQMARSGAPRDLATKVNRP
Ga0126371_133807802	3300021560	Tropical Forest Soil	GHRTAMRVIALATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTANLARLSAWDKRQVERLEAKAKRQVRALKGDA
Ga0207700_118013691	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIALATVVHMLRSRRFYARVITVVVAVRALGQIGKENQASTMARLEAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAAKSNRT
Ga0207641_101853431	3300026088	Switchgrass Rhizosphere	AGHRTAMRMIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLEHRAQRHVRAIKGSAEMARSGGPRQLGTSNHRT
Ga0207981_10727622	3300027560	Soil	RSRRFYARIVTVVIAVRALGQIGQQNQASTMARLAAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAAKSNRT
Ga0307498_103124161	3300031170	Soil	MRVVALATVVHMLRSRRFYQRMITIAIAVGALRKIGQENQASTVARLSAWDKRQVQRLERKAKRQGPVIKGAGRMMRSGAPRHLAAKDRT
Ga0307498_103566951	3300031170	Soil	RQARAAGGDHRTALRVIALAAVVHMLRSRRFYARIATVVIAVRALGQIGQQNQASTMARLSAWDKRQVERVERKAKGQGRAVKASVQMARSGAPRDLATKMNRP
Ga0170824_1122562811	3300031231	Forest Soil	LRSRRFYARIATVVIAVRALGQIGQQNQASTMARLSAWDKRQVERVERKAKSQGRAVKGSVQMARSGAPRDLATKMNRP
Ga0170824_1199196052	3300031231	Forest Soil	VVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTMARLSAWDKRQIQRLERKAKRQGPVIKGAGRMMRSGAPRHLAAKDRT
Ga0170818_1155143832	3300031474	Forest Soil	VVHMLRSRRFYQRMITVAIAVGALRRIGQENQASTMARLSAWDKRQIQRLERKAKRQGPVIKGAGRMMRSGAPRHLAAKDRA
Ga0318516_104972472	3300031543	Soil	MATVVHMLRSRRFYQRMITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0318534_108809492	3300031544	Soil	SGDHRAALRMVALATVVHILRSRRFYRRVITVAIALGAIRQIGQENQASTMARLAAWDKRQVQRLERKAKRQGQVIRGAGQMMRSGAPRHLATKDGA
Ga0318496_102399101	3300031713	Soil	MVALATVVHMLRSRRFYQRVITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0318494_101600782	3300031751	Soil	MVALATVVHILRSRRFYRRVITVAIALGAIRQIGQENQASTMARLAAWDKRQVQRLERKAKRQGQVIRGAGQMMRSGAPRHLATKDGA
Ga0318494_107237832	3300031751	Soil	AGADHRRVMRLLALATVVHVLRSRRFYQRVITVAVALGALRQIGREDQASTMARLAAWDKRQVQRLERKAKRQGQVIKGAGQMMRSGAPRHLTTKNGS
Ga0318535_102026281	3300031764	Soil	VHILRSRRFYRRVITVAIALGAIRQIGQENQASTMARLAAWDKRQVQRLERKAKRQGQVIRGAGQMMRSGAPRHLATKDGA
Ga0318526_103388301	3300031769	Soil	VVHMLRSRRFYQRMITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0318552_106834052	3300031782	Soil	ATVVHILRSRRFYRRVITVAIALGAIRQIGQENQASTMARLAAWDKRQVQRLERKAKRQGQVIRGAGQMMRSGAPRHLATKDGA
Ga0310913_109893961	3300031945	Soil	MVALATVVHMLRSRRFYQRVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0318569_105199652	3300032010	Soil	GDHRAALRMVALATVVHILRSRRFYRRVITVAIALGAIRQIGQENQASTMARLAAWDKRQVQRLERKAKRQGQVIRGAGQMMRSGAPRHLATKDGA
Ga0318549_102273361	3300032041	Soil	ATVVHMLRSRRFYQRVITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0318556_104746221	3300032043	Soil	TVVHMLRSRRFYQRVITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0318577_105482991	3300032091	Soil	VHMLRSRRFYQRMITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0306920_1012350433	3300032261	Soil	AMATVVHMLRSRRFYQRMITIVIVLGALRRIGQENQASTLARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0335085_1001497013	3300032770	Soil	MVALAAVAHMLRSRHFYLRVITVVIALGALRRIGQENQASTMARLAAWDKRQVQRLERKAQHQGRVIKGAGQMMRSGAPRHLTTRDGA
Ga0335085_100756913	3300032770	Soil	MIALATVVHMLRSRRFYARVITVVVAVRALGQIGKENQASTMARLAAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAAKSNRT
Ga0335085_125329311	3300032770	Soil	LRMVALAMVVHMLRSRRFYQRVITVAIALGALRRMGQENQASTMARLTAWDKRQVQRLERKARHQGRVIKGAGQMMRSGAPRHLATKDGA
Ga0335078_113003871	3300032805	Soil	MVALATVVHTLRSRRFYQRVITIAVVLGAVRRIGQENQASTMARLAAWDKRQVQRMERKAKRQGRVIKGAGQMMRSGAPRHLTTRDGD
Ga0335080_107017642	3300032828	Soil	MIALATVVHMLRSRRFYARVITMVVAVRALGQIGKENQASTMARLEAWDKRQLQRLERKAKAQGRAVKGTG
Ga0335080_111591351	3300032828	Soil	ARRARAGGGHRTAMRVIALATVMHILRSRRFYARLITIVVAVRALGQIGQENQASTMARLTAWDKRQVERLERKAKSQGRAVKGSVQMARSGAPRDLARKMNGT
Ga0335081_101783324	3300032892	Soil	MIALATVVHMLRSRRFYARVITMVVAVRALGQIGKENQASTMARLEAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAA
Ga0335083_111797322	3300032954	Soil	GHRTAMRVIALATVMHILRSRRFYARLITIVVAVRALGQIGQENQASTMARLTAWDKRQVERLERKAKSQGRAVKGTLQMARSGAPRDLAAKMDRT
Ga0335077_100688595	3300033158	Soil	MIALATVVHMLRSRRFYARVITMVVAVRALGQIGKENQASTMARLEAWDKRQLQRLERKAKAQGRAVKGTGQMIRSGAPRHLAAKSNRT
Ga0335077_107230002	3300033158	Soil	MRVIALATVMHILRSRRFYARLITIVVAVRALGQIGQENQASTMARLTAWDKRQVERLERKAKSQGRAVKGTLQMARSGAPRDLAAKMDRT
Ga0335077_120987441	3300033158	Soil	IALATVMHILRSRRFYARVITVVVAVRALGQIGQENQASTVARLAAWDKRQVERLERKAKSQGRAVKGSVQMARSGAPRDLARKMNGT
Ga0373950_0020724_402_677	3300034818	Rhizosphere Soil	MRMIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENQTNNLARLSAWDKRQVQRLEHRAQRHVRAIKGSAEMARSGGPRQLGTSNHRT
Ga0373959_0025005_871_1131	3300034820	Rhizosphere Soil	MRVIVLATVAHMLRSRRFYARLITVVVAVRALGQIGHENEASTMARLTAWDKRQVQRLERKAQRQVRAIKGSAEMARSGGPRQLGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences