Basic Information | |
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Family ID | F083251 |
Family Type | Metagenome |
Number of Sequences | 113 |
Average Sequence Length | 45 residues |
Representative Sequence | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Number of Associated Samples | 78 |
Number of Associated Scaffolds | 113 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 7.96 % |
% of genes near scaffold ends (potentially truncated) | 51.33 % |
% of genes from short scaffolds (< 2000 bps) | 87.61 % |
Associated GOLD sequencing projects | 69 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (68.142 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (41.593 % of family members) |
Environment Ontology (ENVO) | Unclassified (92.035 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.150 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 71.74% β-sheet: 0.00% Coil/Unstructured: 28.26% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Marine Water Surface Seawater Seawater Seawater Aqueous Seawater Seawater Estuarine Marine Marine Estuarine Water Pelagic Marine Seawater Marine Marine Sediment Seawater Deep Subsurface Pond Water |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2011_100197078 | 3300000115 | Marine | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
DelMOWin2010_100760092 | 3300000117 | Marine | MKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
JGI24006J15134_100405616 | 3300001450 | Marine | MDNISMKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLNK* |
JGI24006J15134_102495671 | 3300001450 | Marine | MKDLNKINTIKFYTYKNILYILINLKLLTHNKKNQIL |
JGI24004J15324_100628222 | 3300001472 | Marine | MNELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
JGI24005J15628_101760672 | 3300001589 | Marine | MDNINMKDLNKINTIKFYTYKNILYILINLKLLTHNKKNQILSKYYDNLNK* |
KVRMV2_1004157345 | 3300002231 | Marine Sediment | SIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0068511_10627791 | 3300005057 | Marine Water | MKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0075466_11790261 | 3300006029 | Aqueous | MKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK* |
Ga0075441_102159714 | 3300006164 | Marine | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLNK* |
Ga0098038_10740763 | 3300006735 | Marine | VLDNINMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098038_11037682 | 3300006735 | Marine | VLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098038_11057175 | 3300006735 | Marine | MKELNKINTIKFYTYKKLLYILINLKLLTPNQKNSILSKYYDNLTNN* |
Ga0098038_11563081 | 3300006735 | Marine | MKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098038_11699662 | 3300006735 | Marine | LDNISMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098038_12758062 | 3300006735 | Marine | MKNLNKLNSIKFYTYKKLLYILINLKLLTYNQKNS |
Ga0098037_11480862 | 3300006737 | Marine | MLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098037_11701031 | 3300006737 | Marine | MKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098037_11900883 | 3300006737 | Marine | VLDNINMKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK* |
Ga0098037_12330132 | 3300006737 | Marine | VLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQK |
Ga0098037_12699931 | 3300006737 | Marine | LDNINMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098035_12198972 | 3300006738 | Marine | LDNNNMKDLNKTNTIKFYTYKKLLYILINLKLLTSNQKNNILSLYYDNLTK* |
Ga0098042_11506551 | 3300006749 | Marine | KFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098055_11883761 | 3300006793 | Marine | MKELNTTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDKLNK* |
Ga0098055_12486391 | 3300006793 | Marine | MKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN* |
Ga0098055_12674823 | 3300006793 | Marine | LNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN* |
Ga0098055_13580331 | 3300006793 | Marine | MKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLNK* |
Ga0070750_101572944 | 3300006916 | Aqueous | MKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*N* |
Ga0070746_103197241 | 3300006919 | Aqueous | NKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0070746_103686762 | 3300006919 | Aqueous | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK*N* |
Ga0070748_11540101 | 3300006920 | Aqueous | NKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0070748_11549861 | 3300006920 | Aqueous | NKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK* |
Ga0098060_10523141 | 3300006921 | Marine | TNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098060_11417492 | 3300006921 | Marine | MKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSIL |
Ga0098060_11527781 | 3300006921 | Marine | IVLDNINMKELNTTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDKLNK* |
Ga0098060_11601351 | 3300006921 | Marine | KELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098060_12169981 | 3300006921 | Marine | DNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098041_11523761 | 3300006928 | Marine | IKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN* |
Ga0098041_11904071 | 3300006928 | Marine | TTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0098036_11392763 | 3300006929 | Marine | MNELNKINKLKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN* |
Ga0075444_104003941 | 3300006947 | Marine | MKELNKLNTIKFYTYKKLLYILIKLNLLTYNNKNQILSKYYDELNK* |
Ga0070747_11283851 | 3300007276 | Aqueous | KELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0070747_12925891 | 3300007276 | Aqueous | IKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK* |
Ga0099847_10192214 | 3300007540 | Aqueous | MKELNTKNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK* |
Ga0110931_11385271 | 3300007963 | Marine | NTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0114910_10922383 | 3300008220 | Deep Ocean | NKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK* |
Ga0102816_11662324 | 3300008999 | Estuarine | KTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN* |
Ga0102960_11863631 | 3300009000 | Pond Water | FAKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0115566_102520561 | 3300009071 | Pelagic Marine | NTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0114903_10210492 | 3300009412 | Deep Ocean | MKDLNKINTIKFYTYKQLLYILINLKLLTYNQKNSILSKYYDNLTNN* |
Ga0115570_104943242 | 3300009496 | Pelagic Marine | MKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSI |
Ga0114900_10157101 | 3300009602 | Deep Ocean | MKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTN* |
Ga0115012_110365723 | 3300009790 | Marine | LKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLTK* |
Ga0098043_10260975 | 3300010148 | Marine | MKDLNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0114934_102273132 | 3300011013 | Deep Subsurface | MKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLIK* |
Ga0160422_103281991 | 3300012919 | Seawater | MSMKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0163110_111010193 | 3300012928 | Surface Seawater | VLDNINMKQLNKINTIKFYTYKKLLYILINLKLLTYNQK |
Ga0163109_114472282 | 3300012936 | Surface Seawater | MKDLDKINKIKFYTYKQLLYILINLKLLTYNQKNSILSKYYDNLTK* |
Ga0181398_11497871 | 3300017725 | Seawater | TNVIQIVLDNISMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0181419_10445541 | 3300017728 | Seawater | NKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0181416_10204675 | 3300017731 | Seawater | MKELNTTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK |
Ga0181416_10243991 | 3300017731 | Seawater | MKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNL |
Ga0181415_10350724 | 3300017732 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLKK |
Ga0181415_11070653 | 3300017732 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLNK |
Ga0181426_10864171 | 3300017733 | Seawater | MKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTKXN |
Ga0181428_11372161 | 3300017738 | Seawater | MKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSI |
Ga0181421_11596561 | 3300017741 | Seawater | MKELNTKNKIKFYTYKQLLYILINLKLLTYNQKNS |
Ga0181402_11629401 | 3300017743 | Seawater | NKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLNK |
Ga0181397_10978321 | 3300017744 | Seawater | KELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0181393_10295514 | 3300017748 | Seawater | MKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYY |
Ga0181393_10594332 | 3300017748 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTKXN |
Ga0181405_10073363 | 3300017750 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDN |
Ga0187219_11940252 | 3300017751 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNS |
Ga0181411_10237106 | 3300017755 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSIL |
Ga0181408_11165711 | 3300017760 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLN |
Ga0181422_11423041 | 3300017762 | Seawater | NTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0181413_12051261 | 3300017765 | Seawater | SMKELNKTNKIKFYTYKKILYILINLKLLTYNQKNLILSKYYDNLTK |
Ga0187220_10179926 | 3300017768 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSK |
Ga0187220_10282345 | 3300017768 | Seawater | NINMKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0181425_12768112 | 3300017771 | Seawater | MKELNKINKIKFYTYKKLLYILINLKLLTYNQRNSILSKY |
Ga0181423_10557171 | 3300017781 | Seawater | MKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILAKYYDNLTK |
Ga0206125_1000839915 | 3300020165 | Seawater | MKELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0206125_101574781 | 3300020165 | Seawater | KELNTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0211528_103859411 | 3300020417 | Marine | KNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLINKQ |
Ga0213862_100206115 | 3300021347 | Seawater | MKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0222715_102643121 | 3300021960 | Estuarine Water | NMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0212023_10426791 | 3300022061 | Aqueous | SMKELNKTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
(restricted) Ga0233429_12745761 | 3300022902 | Seawater | MDNISMKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLNK |
Ga0208157_10905661 | 3300025086 | Marine | MKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0208157_11341391 | 3300025086 | Marine | MLDNINMKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0208669_10030277 | 3300025099 | Marine | MKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0208669_10039551 | 3300025099 | Marine | MKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILS |
Ga0208669_10368831 | 3300025099 | Marine | DNINMKELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0208158_11139551 | 3300025110 | Marine | KIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN |
Ga0208158_11230232 | 3300025110 | Marine | MKELTTKNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYY |
Ga0208919_10731965 | 3300025128 | Marine | MNELNKINKLKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN |
Ga0208919_12408311 | 3300025128 | Marine | MKELNKINTIKFYTYKKLLYILINLKLLTYNQKNLILSKYYDNLTK |
Ga0209645_10649505 | 3300025151 | Marine | MKDLNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0209337_10286772 | 3300025168 | Marine | MKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLTK |
Ga0209337_11368291 | 3300025168 | Marine | MDNINMKDLNKINTIKFYTYKQLLYILINLKLLTHNKKNQILSKYYDNLNK |
Ga0209337_11915231 | 3300025168 | Marine | MDNINMKELNKTNKIKFYTYKKLLYILINLNLLTYNQKNSILSKYYDKLNK |
Ga0208029_10128721 | 3300025264 | Deep Ocean | MKDLNKINTIKFYTYKQLLYILINLKLLTYNQKNSILSKYYDNLTNN |
Ga0208180_10116349 | 3300025277 | Deep Ocean | MKELNKTNKIKFYTYKKLLYILIHLKLLTYNQKNSILSKYYDNLTK |
Ga0208450_10226531 | 3300025301 | Deep Ocean | MNELNTTNKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTK |
Ga0208767_11114194 | 3300025769 | Aqueous | MKNLNKINSIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTKXN |
Ga0209404_103333463 | 3300027906 | Marine | MNELNKINKLKFYTYKKLLYILINLKLLTYNQKNSILSKYYDKLNK |
Ga0209404_109158091 | 3300027906 | Marine | IRTKLDNINMKDLNKINTIKFYTYKQLLYILIKLNIITYNQKNSILSKYYDNLTNN |
Ga0307985_104120342 | 3300031629 | Marine | MDNISMKKLNKLNTIKFYTYKKLLYILINLKLLTYNNKNQILSKYYDKLNK |
Ga0307984_11148861 | 3300031658 | Marine | MKELNKLNTIKFHTYKKLLYILIHLQLLTYNNKNKILSKYYDKLN |
Ga0307984_11472661 | 3300031658 | Marine | ISMKELNKINTIKFYTYKKLLYILINLNLLTYNNKNQILSKYYDKLNK |
Ga0315322_100407218 | 3300031766 | Seawater | MKDLNKINKIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDNLTNN |
Ga0315330_100077133 | 3300032047 | Seawater | MKELNKINTIKFYTYKQLLYILIKLNIITYNQKNSILSKYYDNLTNN |
Ga0315315_101834781 | 3300032073 | Seawater | MKELNKINTIKFYTYKKLLYILINLKLLTYNQKNSILSKYYDN |
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