Metagenome Family F083203

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083203
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	103 residues
Representative Sequence	MSTEVAIPEGTHTAHFEASLEAEHEAERDLMKSLVKAILVSLPIMIGVFVLMTAIAISDKTDWYVWLSLGVGLGVVGAVLLGSLAGATLNAHKLDDVDRITAGL
Number of Associated Samples	95
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.19 %
% of genes near scaffold ends (potentially truncated)	35.40 %
% of genes from short scaffolds (< 2000 bps)	91.15 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.106 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (13.274 % of family members)
Environment Ontology (ENVO)	Unclassified (30.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.15% β-sheet: 0.00% Coil/Unstructured: 34.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01872	RibD_C	24.78
PF04075	F420H2_quin_red	13.27
PF08327	AHSA1	7.96
PF13193	AMP-binding_C	4.42
PF12840	HTH_20	3.54
PF10604	Polyketide_cyc2	1.77
PF10698	DUF2505	1.77
PF00106	adh_short	0.88
PF00501	AMP-binding	0.88
PF13669	Glyoxalase_4	0.88
PF12867	DinB_2	0.88
PF12681	Glyoxalase_2	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	24.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	24.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.74 %
Unclassified	root	N/A	23.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.86 %
Unclassified	root	N/A	23.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.31 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.65 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.77 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.31 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.77 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.88 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.31 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.77 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.88 %
Brevundimonas aveniformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas aveniformis	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.31 %
Jiangella anatolica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella anatolica	0.88 %
Pseudonocardia sulfidoxydans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia sulfidoxydans	0.88 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	0.88 %
Brevundimonas aveniformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas aveniformis	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101690683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3651	Open in IMG/M
3300002568\|C688J35102_120966129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3460	Open in IMG/M
3300004006\|Ga0055453_10283892	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300004081\|Ga0063454_100278013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1027	Open in IMG/M
3300004479\|Ga0062595_100266827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1125	Open in IMG/M
3300004479\|Ga0062595_101335899	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005338\|Ga0068868_101405941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	651	Open in IMG/M
3300005338\|Ga0068868_102246588	Not Available	520	Open in IMG/M
3300005355\|Ga0070671_100524656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1020	Open in IMG/M
3300005434\|Ga0070709_10144142	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300005436\|Ga0070713_100088306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2660	Open in IMG/M
3300005439\|Ga0070711_101146300	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005466\|Ga0070685_11249190	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005543\|Ga0070672_101765545	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005544\|Ga0070686_101619928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300005544\|Ga0070686_101924569	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005547\|Ga0070693_100630573	Not Available	777	Open in IMG/M
3300005548\|Ga0070665_101932960	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005561\|Ga0066699_11056282	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005764\|Ga0066903_107455394	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005843\|Ga0068860_100982057	Not Available	862	Open in IMG/M
3300005937\|Ga0081455_10260066	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005985\|Ga0081539_10050589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2350	Open in IMG/M
3300006047\|Ga0075024_100151679	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300006050\|Ga0075028_100251106	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300006050\|Ga0075028_100397553	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300006050\|Ga0075028_100536796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	687	Open in IMG/M
3300006057\|Ga0075026_100086684	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300006057\|Ga0075026_100603365	Not Available	645	Open in IMG/M
3300006172\|Ga0075018_10105847	All Organisms → cellular organisms → Bacteria → Proteobacteria	1253	Open in IMG/M
3300006172\|Ga0075018_10342952	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300006174\|Ga0075014_100774477	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300006175\|Ga0070712_100508252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1011	Open in IMG/M
3300006354\|Ga0075021_10500093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	770	Open in IMG/M
3300006804\|Ga0079221_11354230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	563	Open in IMG/M
3300006806\|Ga0079220_10643426	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300006854\|Ga0075425_101459141	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300006871\|Ga0075434_102072228	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006881\|Ga0068865_100426144	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300006914\|Ga0075436_101533388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas aveniformis	506	Open in IMG/M
3300007769\|Ga0102952_1102186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300007775\|Ga0102953_1046264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia sulfidoxydans	1995	Open in IMG/M
3300009011\|Ga0105251_10613541	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300009098\|Ga0105245_11788892	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009156\|Ga0111538_12970653	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300009177\|Ga0105248_11046269	Not Available	922	Open in IMG/M
3300009553\|Ga0105249_11249188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	814	Open in IMG/M
3300009789\|Ga0126307_10041898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3557	Open in IMG/M
3300009840\|Ga0126313_10045686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3068	Open in IMG/M
3300009840\|Ga0126313_10785141	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300009870\|Ga0131092_10511560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300010041\|Ga0126312_10358352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	1034	Open in IMG/M
3300010045\|Ga0126311_11622781	Not Available	545	Open in IMG/M
3300010166\|Ga0126306_10009787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6020	Open in IMG/M
3300010166\|Ga0126306_11828098	Not Available	509	Open in IMG/M
3300010396\|Ga0134126_12790431	Not Available	530	Open in IMG/M
3300010403\|Ga0134123_12190255	Not Available	615	Open in IMG/M
3300012212\|Ga0150985_110642281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1514	Open in IMG/M
3300012212\|Ga0150985_112097720	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300012285\|Ga0137370_10862758	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012469\|Ga0150984_102501818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1599	Open in IMG/M
3300012469\|Ga0150984_122664796	Not Available	583	Open in IMG/M
3300012955\|Ga0164298_10946008	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300012961\|Ga0164302_11233804	Not Available	600	Open in IMG/M
3300012984\|Ga0164309_10847147	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012985\|Ga0164308_10112101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1943	Open in IMG/M
3300012985\|Ga0164308_12044717	Not Available	534	Open in IMG/M
3300012987\|Ga0164307_10243451	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300013297\|Ga0157378_11780234	Not Available	664	Open in IMG/M
3300013308\|Ga0157375_13580628	Not Available	517	Open in IMG/M
3300014270\|Ga0075325_1213278	Not Available	521	Open in IMG/M
3300014325\|Ga0163163_12145729	Not Available	618	Open in IMG/M
3300014326\|Ga0157380_10363838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358	Open in IMG/M
3300014326\|Ga0157380_11045715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300014968\|Ga0157379_11189089	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300014968\|Ga0157379_12455229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300015192\|Ga0167646_1012797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2276	Open in IMG/M
3300015371\|Ga0132258_13129839	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300016387\|Ga0182040_11412309	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300018469\|Ga0190270_10849807	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300018476\|Ga0190274_11840199	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300018481\|Ga0190271_11913428	Not Available	703	Open in IMG/M
3300025915\|Ga0207693_10151062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1827	Open in IMG/M
3300025927\|Ga0207687_11239975	Not Available	641	Open in IMG/M
3300025927\|Ga0207687_11732329	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300025928\|Ga0207700_10115316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2169	Open in IMG/M
3300025931\|Ga0207644_10481813	Not Available	1022	Open in IMG/M
3300025938\|Ga0207704_10302812	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300025961\|Ga0207712_11709132	Not Available	564	Open in IMG/M
3300025972\|Ga0207668_11455570	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300025986\|Ga0207658_11323464	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300027894\|Ga0209068_10015908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3625	Open in IMG/M
3300027894\|Ga0209068_10127337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1363	Open in IMG/M
3300027894\|Ga0209068_10518770	Not Available	688	Open in IMG/M
3300027894\|Ga0209068_10605148	Not Available	638	Open in IMG/M
3300027915\|Ga0209069_10062496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1760	Open in IMG/M
3300028379\|Ga0268266_10294331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1513	Open in IMG/M
3300028381\|Ga0268264_12552092	Not Available	516	Open in IMG/M
3300028573\|Ga0265334_10349666	Not Available	505	Open in IMG/M
3300028782\|Ga0307306_10137334	Not Available	673	Open in IMG/M
3300028790\|Ga0307283_10098541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300028819\|Ga0307296_10091964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300028872\|Ga0307314_10264660	Not Available	538	Open in IMG/M
3300029984\|Ga0311332_10693674	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300031240\|Ga0265320_10210541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300031251\|Ga0265327_10087295	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300031549\|Ga0318571_10370961	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031720\|Ga0307469_12489601	Not Available	506	Open in IMG/M
3300031744\|Ga0306918_11196057	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300032076\|Ga0306924_11625330	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300032174\|Ga0307470_10218787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300032261\|Ga0306920_100558637	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300033004\|Ga0335084_10831527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella anatolica	937	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.83%
Host-Associated	Host-Associated	36.28%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.67%
Plants	Host-Associated → Plants	36.28%
Aquatic	Environmental → Aquatic	14.16%
Wastewater	Engineered → Wastewater	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.66%
Sediment	Environmental → Aquatic → Sediment	13.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.73%
Marine	Environmental → Aquatic → Marine	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.27%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.50%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007769	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG	Environmental	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1016906836	3300000956	Soil	MSTEVAVMDGGAPSRFEASLHAEQAAERHLMRALVASILVALPISIAIFLFMTAIAISDKAEWYVWVGLGVGLGVIGALLLGSLAGATLSAHKLDDVDRETFGV*
C688J35102_1209661293	3300002568	Soil	MSTEVAVAADATMSRFEASLAAEHDAERDLLKSLARSIVLTMPVTIAIFVFIAAVAISDKAEWYVWLGLGVGLGVIGALLMGSLAGATINAHKLDDVDRATYGA*
Ga0055453_102838922	3300004006	Natural And Restored Wetlands	MSTEVAVVASTRSARFEESLAAEEAAERGLFVTIAKTILISLPIMIGIFLLMTLIAISDKTEWYVWVGLGVGL
Ga0063454_1002780132	3300004081	Soil	MSTDVAVVESAHGARFDESLAAEHDAERGLMVTIAKTILISLPVMIGIFLLMTLIAISDKTDWYVWVGLGVGLGVLGALLLGSLAGATISAHRLDAVDRATYD*
Ga0062595_1002668273	3300004479	Soil	MSTEVAIPEGTHTAHFEASLEAEHEAERDLMKSLVKAILVSLPIMIGVFVLMTAIAISDKTDWYVWLSLGVGLGVVGAVLLGSLAGATLNAHKLDDVDRITAGL
Ga0062595_1013358991	3300004479	Soil	MSGEVAIPEDVAERFEDSLEREHEAERDLLKAIVKSILVSLPVMIGVFLLLAAIAFSDKVEWYVWIGFGVGIGVIGAVLLGALA
Ga0068868_1014059412	3300005338	Miscanthus Rhizosphere	MSSEVAIPEDHAERFEASLTAENEAERDLLKSLVKSILVSLPIMIGIFLLIAAIAFSDKVEWYVWVSFGVGIGVIGAVLLGALAGATLNAHKLDEVDRIADGVDPHSV*
Ga0068868_1022465882	3300005338	Miscanthus Rhizosphere	DPAMSSEVAVVESAHSVRFEESLAAEQDAERSLMVTIVKTILISLPVMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVLGALLLGSLAGATLNAHRLDAVDRATYD*
Ga0070671_1005246562	3300005355	Switchgrass Rhizosphere	MSSEVAVVESAHSVRFEESLAAEQDAERSLMVTIVKTILISLPVMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVLGALLLGSLAGATLNAHRLDAVDRATYD*
Ga0070709_101441423	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGSLAGATMNAHKLDEVDRHTYGA*
Ga0070713_1000883062	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGALAGATMNAHKLDEVDRHTYGA*
Ga0070711_1011463001	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGALAGATMNAHKLDEVDRHTYG
Ga0070685_112491902	3300005466	Switchgrass Rhizosphere	MSSEVAIPEDHAERFEASLTAENEAERDLLKSLVKSILVSLPIMIGIFLLIAAIAFSDKVEWYVWVSFGVGIGVIGAVLLGALAGATLNAHK
Ga0070672_1017655451	3300005543	Miscanthus Rhizosphere	MSSEVAIPEDHAERFEASLTAENEAERDLLKSLVKSILVSLPIMIGIFLLIAAIAFSDKVEWYVWVSFGVGIGVIGAVLLGALAGATLNAHKLDEVDRIADG
Ga0070686_1016199281	3300005544	Switchgrass Rhizosphere	MSTDVAVVESAGSSRFEQSLAAEEAAERTLWATVAKTIVLSLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVLGALLLGSLAGATLNAHRLDAVDRATYD*
Ga0070686_1019245692	3300005544	Switchgrass Rhizosphere	MSSEVAIPEDHAERFEASLTAENEAERDLLKSLVKSILVSLPIMIGIFLLIAAIAFSDKVEWYVWIGFGVGIGVIGAVLLGALAGATLNAHKL
Ga0070693_1006305731	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGSLAGATMNAHKLDEVDRHTYGA*
Ga0070665_1019329602	3300005548	Switchgrass Rhizosphere	VVESAGSSRFEQSLAAEEAAERTLWATVAKTIVLSLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATIAAHRLDAVDRATYD*
Ga0066699_110562821	3300005561	Soil	MSTEVAVPEGTRAEHFEASLEAEHEAERDLMKSLVKSIVVSLPIMIGVFVLMTAIAISDKTDWYVWLGLGVGLGVIGAFLLGSLAGATLNAHKLDNVDRITAGLEPD*
Ga0066903_1074553941	3300005764	Tropical Forest Soil	MSTEVAVSESHPAERFEASLDAEHDAERDLMKSLVKSIVVSLPIMIGVFVLIAAISISDKTDWYVWLGLGVGLGVIGAFLLGSLAGATLNAHKLDEVDRHTYGQ*
Ga0068860_1009820572	3300005843	Switchgrass Rhizosphere	MSTEVAVPEDAGTSRFEASLAAEQVAERSLWVTIAKTILLSLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATISAHRLDAVDRATYD*
Ga0081455_102600663	3300005937	Tabebuia Heterophylla Rhizosphere	MSTEVAVADGAAPSRFEASLRAEHEAERHLMKALVRSILLTLPVTIAIFVFIAAVAISDKTEWYVWLGLGVGLGVIGAFLMGSLAGATLNAHKLDEVDRATYGA*
Ga0081539_100505894	3300005985	Tabebuia Heterophylla Rhizosphere	MSTEVAVPEGAHTERFEQSLEAEHEAERDLLLSLVRAIVISLPIMIGIFVLIAAISISDKTEWYVWLGLGVGIGVIGAFLLGSLAGATLNAHKLDEVDRHTYGQ*
Ga0075024_1001516792	3300006047	Watersheds	MSTEVAVADATTTARFQASLEAEQAAERDLLSSLVKSILVALPISIAIFLFMMAIAISDKVEWFVWISIGVGLGVIGALLLGSLAGATLNAHKLDDVDRVTYGLAPDHDAH*
Ga0075028_1002511062	3300006050	Watersheds	MSTDVAVVDGTTTERFQTSLATEQAAERDLLSSLAKSIVVALPISIAIFLFMTAVAISDKVEWYVWVGLGVGLGVIGAFLLGALAGATLNAHKLDEVDRITYGLSDHG*
Ga0075028_1003975532	3300006050	Watersheds	MSTEVAVADGASMSRFEASLEAEHAAERDLMKALVRSVLLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGFLLGALAGATINAHKLDEVDRHTYGA*
Ga0075028_1005367962	3300006050	Watersheds	MSSEVAVPDNTRSARFEESLAAEKAAERSLFTTIGKTILFALPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGTIGAVLLGSLAGVTMAAHRLDAVDRIAAGLDPEGP*
Ga0075026_1000866843	3300006057	Watersheds	MSTDVAVPAGEARSARFEASLAAEQSAERDLLSSLVKSILLALPVSIAIFVFIAAVAISDKVEWYVWVGLGVGIGVIGALLLGALAGATINAHKLDEVDRASYGL*
Ga0075026_1006033652	3300006057	Watersheds	MSGEVAIPEDIAERYEDSLEREHEAERDLLKALVKAILVSLPILIGIFVLIAAIAISDKTEWYVWLSLGVGIGVIGACLLGSLAGATLNAHKLDDVDRITAGLEPEAH*
Ga0075018_101058471	3300006172	Watersheds	EASLAAEQRAERDLVSSLVKSILLALPITIAIFVFIAAIAISDKVEWYVWISLGVGLGVIGALLLGALAGATINAHKLDEVDRITYGLSDHA*
Ga0075018_103429521	3300006172	Watersheds	MSTDVAVVDATATERFQASLATEQAAERDLLSSLVKSILVALPISIAIFLFMTAVAISDKVEWYVWIGLGVGLGVIGAFLL
Ga0075014_1007744772	3300006174	Watersheds	MSGEVALPEGEVRSARFEASLAAEQRAERDLLSSLVKSILLALPITIAIFVFIAAVAISDKVEWYVWIGLGVGLGVIGALLLGSLAGATINAHKLDEVDRDSYGL*
Ga0070712_1005082522	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGALAGATMNAHKFDEVDRHTYGA*
Ga0075021_105000931	3300006354	Watersheds	MSSEVAVVDEATRSETFEASLVAEEAAERHLLKSLVRSVLIALPISIAFFLVMVGIAIGDKVAWYVWVSMGVGLGVVGAVLLGSLAGATLNAHKLDEVDRQTYTV*
Ga0079221_113542302	3300006804	Agricultural Soil	MSTEVAVPEAQSERFEASLAAENEAERDLLKSLVKSIIVSLPIMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVIGALLLGSLAGATLN
Ga0079220_106434261	3300006806	Agricultural Soil	TEVAVPEGVHTEHFEQSLAAEHEAERDLLKSLVKSIIVSLPIMIGVFVLMTAIAISDKTDWYVWLGLGVGLGVIAAFLLGALAGATLNAHKLDEVDRVSAGVAPDSVERVVSGRVLPTAP
Ga0075425_1014591411	3300006854	Populus Rhizosphere	MSTEVAVADGATTSRFEASLEAEHEAERDLMKALVKAVLFTLPVTIAIFVFIAAVAISDKVDWYVWLSLGVGLGVIGALLMGSLAGATMNAHKLDEVDRATYGA*
Ga0075434_1020722282	3300006871	Populus Rhizosphere	MSTEVAVADGATMSRFEASLEAEHEAERDLMKALVKAVLFTLPVTIAIFVFIAAVAISDKVDWYVWLSLGVGLGVIGALLMGSLAGATMNAHKLDEVDRATYGA*
Ga0068865_1004261442	3300006881	Miscanthus Rhizosphere	MSGEVAIPEDVAERFEDSLEREHEAERDLLKAIVKSILVSLPVMIGVFLLLAAIAFSDKVEWYVWVSFGVGIGVIGAVLLGALAGATLNAHKLDEVDRIADGVDPHSV*
Ga0075436_1015333881	3300006914	Populus Rhizosphere	MSSEVAVPEGTHTSHFEASLEAEHDAERDLLKSLAKSLVVALPIMIGIFVLMTAIAISDKTEWYVWLGLGVGLVVNGAFLLGALAGATLNAHKLDDVDRITAGLEPDSP*
Ga0102952_11021861	3300007769	Soil	MSTEVAIPEAQSERFEASLEAEHAAERDLMMSLIKSIAISMPIMIAIFVLMTAIAISDKADWWVWLGLGVGLGAVAALLL
Ga0102953_10462641	3300007775	Soil	MSTEVAIPEAQSERFEASLEAEHAAERDLMMSLIKSIAISMPIMIAIFVLMTAIAISDKADWWVWLGLGVGLGAVAALLLGSLAGATLNAHKLDEVDRITAGLEPEAA*
Ga0105251_106135411	3300009011	Switchgrass Rhizosphere	MSTEVAVPEGTHTDHFEASLNAEHEAERDLLTSLVKAIVVSLPIMIGVFVLMTAIAISDKTDWYVWLGLGVGLGVIAAFLLGSLAGATLNAHKLDEVDRITAG
Ga0105245_117888921	3300009098	Miscanthus Rhizosphere	MSGEVAIPEDVAERFEDSLEREHEAERDLLKAIVKSILVSLPVMIGVFLLLAAIAFSDKVEWYVWIGFGVGIGVIGAVLLGARAGATLNAHKLDDVDHITSGL*
Ga0111538_129706532	3300009156	Populus Rhizosphere	MSTEVAIPEGSQSARFEESLAAERAAERSLFTTIVKTIVISLPLMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATMAAHRLDAVDRATYD*
Ga0105248_110462692	3300009177	Switchgrass Rhizosphere	MSSEVAVVESAHSVRFEESLAAEQDAERSLMVTIVKTILISLPVMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVLGALLLGSLAGATISAHRLDAVDRATYD*
Ga0105249_112491882	3300009553	Switchgrass Rhizosphere	MSTEVAVPEGAGTSRFEASLAAEQVAERSLWVTIAKTILLSLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATISAHRLDAVDRATYD*
Ga0126307_100418982	3300009789	Serpentine Soil	MSAEVAIPEDVAVRFEASLEREHAAERDLLKAIVKSIIVSLPIMIAVFLLFAAITFSDKVEWYVWIGFGVGIGVIGAVLLGALAGATMNAHKLDEVDRITAGLEPDAP*
Ga0126313_100456862	3300009840	Serpentine Soil	MSSEVAIPEAQSERFEASLEAEHEAERDLLTSLVKAIVVAMPIMIGIFVLMTAIAISDKTEWYVWLGLGVGLGVLGAFLLGSLAGATINAHKLDDVDRITAGLEPDAP*
Ga0126313_107851412	3300009840	Serpentine Soil	MSTEVAVAEAHSARFEESLAAEKAAERSLMVTIVKTIIVSLPVMIGIFLLMTAIAISDKTEWYVWIGMGVGLGVIGALLLGSLAGVTVAAHRLDAVDRATYD*
Ga0131092_105115602	3300009870	Activated Sludge	MSTEVAIPESVAERFESSLDREHEAEHDLLTSLVRAIVVSLPVMIGVFVLIAAIAISDKTEWYVWLGLGVGLGVLAAFLLGSLAGATLNAHKLDAVDRITAGLEPDSA*
Ga0126312_103583522	3300010041	Serpentine Soil	MSAEVAIPEDVAVRFEASLEREHAAERDLLRAIVKWSIVSLPIMIAVFLLFAAITFSDKVEWYVWIGFGVGIGVIGAVLLGALAGATMNAHKLDEVDRITAGLEPDAP*
Ga0126311_116227812	3300010045	Serpentine Soil	MSTDVAVQDSTHSARFEESLAAEQAAERGLLVTIVKTIVISLPIMIGIFLLMTAIAISDKTEWYVWIGMGVGLGVIGALLLGSLAGVTVAAHRLDAVDRATYD*
Ga0126306_100097873	3300010166	Serpentine Soil	MSTEVAVPESTRSARFEDSLAAEQAAERSLFVTIATMVVISLPIMIGIFLLITLLAISDKTEWYVWIGMGVGLGVIGAMLLGSLAGATMAAHRLDAVDRATYG*
Ga0126306_118280981	3300010166	Serpentine Soil	MGLTRRVEREDTMSGVVAIPEDVAVRFDESLEREHEAERDLLRALVKSILVSLPIMVGVFVLITAIAISGKTEWYVWISLGAGLGVIGALLLGALAGATLNAHKLDDVDRITAGLEPEAH
Ga0134126_127904312	3300010396	Terrestrial Soil	MSTTDLAIPESTHTTRFEASLAAEQEVERGIWITIAKTILVSIPLMIGIFILITAIAISDKTEWYVWLGLGVAFGVIGACLLGSLAGATISAHRLDAVDRAVYD*
Ga0134123_121902551	3300010403	Terrestrial Soil	GTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLLGSLAGATMNAHKLDEVDRHTYGA*
Ga0150985_1106422811	3300012212	Avena Fatua Rhizosphere	MSTEVAVAADATMSRFEASLAAEHDAERDLLKSLARSIVLTMPVTIAIFVFIAAVAISDKAEWYVWLGLGVGLGVIGALLMGSLAGATINAHKLDDVDRATYG
Ga0150985_1120977202	3300012212	Avena Fatua Rhizosphere	MSTQVAVVESAHGARFDESLAAEHDAERGLMVTIAKTILISLPVMIGIFLLMTLIAISDKTDWYVWVGLGVGLGVLGALLLGSLAGATISAHR
Ga0137370_108627582	3300012285	Vadose Zone Soil	MSTEVAVREGTHISHFEASLEAEHEAERDLLKSLVKSILVALPIMIGIFVLMTAIAISDKTDWYVWLGLGVGLGVIGACLLGSLAGATLNAHKLDD
Ga0150984_1025018183	3300012469	Avena Fatua Rhizosphere	MSTEVAVAADATMSRFEASLAAEHDAERDLLKSLARSIVLTMPVTIAIFVFIAAVAISDKAEWYVWLGLGVGLGVIGALLMGSLAGATINA
Ga0150984_1226647961	3300012469	Avena Fatua Rhizosphere	MSSEVAVPESTRGTRFDESLSAERAAEHGLMVTIVKTILISLPIMIGIFLLMTAIAISDKSEWYVWVGLGVGLGSIGAVLLGSLAGATIAAHRLDAVDRATYGLEPEDH*
Ga0164298_109460082	3300012955	Soil	MSGEVAIPEDVAERFEDSLEREHRAERDLVKALVKSILVSLPIMIGIFVLISAIAISDKTEWYVWVSLGVGLGVIGAFLLGALAGATLNAHKLDDVDRITAGLPPDSL*
Ga0164302_112338041	3300012961	Soil	PEDLAERFEDSLEREHQAERDMLKALVKSVLVSLPIMIGIFVLISAIAISDKTEWYVWVSLSVGLGVIGAFLLGALAGATLNAHKLDDVDRITAGLPPDSL*
Ga0164309_108471471	3300012984	Soil	MSGEVAIPEDIAERFEDSLEREHRAERDLLKALVKSILVSMPIMIGIFVLISAIAISDKTEWYVWVSLGVGLGVIGAFLLGALAGATLNAHKLDDVDRITAGLPPDSL*
Ga0164308_101121013	3300012985	Soil	MSSEVAIPEDHAERFEASLTAENEAERDLLKSLVKSILVSLPIMIGIFLLIAAIAFSDKVEWYVWVSFGVGIGVIGAVLLGALAGATLNAHKLDEVDRIAEGVDPHSV*
Ga0164308_120447171	3300012985	Soil	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYGWLSLGVGLGVLGGFLLGALAGATLNAHKLDEVDRHTYGA*
Ga0164307_102434512	3300012987	Soil	MSGEVAIPEDIAERFEDSLEREHRAERDLLKALVKSILVSLPIMIGIFVLISAIAISDKTEWYVWVSLGVGLGVIGALLLGALAGATLNAHKLDDVDRITAGLPPDSL*
Ga0157378_117802342	3300013297	Miscanthus Rhizosphere	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGVLAGATMNAHKLDEVDRHTYGA*
Ga0157375_135806281	3300013308	Miscanthus Rhizosphere	MSTEVAIPESTHSARFEESLAAEQEAERSLFVTIVKTIVISLPIMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATMAAHRLDAVDRATYD*
Ga0075325_12132782	3300014270	Natural And Restored Wetlands	LEAEHAAERDLLTSLVKSIVVSLPIMVGIFVLMTAIAISDKTDWYVWLGLGVGLGVIGALLLGALAGATINAHKLDEVDRITAGLEPDAA*
Ga0163163_121457292	3300014325	Switchgrass Rhizosphere	MSTEVAVPEGTHTDHFEASLNAEHEAERDLLTSLVKAIVVSLPIMIGVFVLMTAIAISDKTDWYVWLGLGVGLGVIAAFLLGSLAGATLNAHKLDEVDRITAGLEPDAP*
Ga0157380_103638382	3300014326	Switchgrass Rhizosphere	MSTDVVVVESAGSSRFEQSLAAEEAAERTLWATVAKTIVLSLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGASLLGSLAGATIAAHRLDAVDRATYD*
Ga0157380_110457152	3300014326	Switchgrass Rhizosphere	MSAMSAEVAVPDSTHRARFEESLAAEQAAERSLYVTIVKTIVISLPIMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATMAAHRLDAVDRATYD*
Ga0157379_111890892	3300014968	Switchgrass Rhizosphere	MSTEVAVPEGTHTDHFEASLNAEHEAERDLLTSLVKAIVVSLPIMIGVFVLMTAIAISDKTDWYVWLGLGVGLGVIAAFLLGSLAGATLNAHKLDEVDRITAGLEPDAS*
Ga0157379_124552291	3300014968	Switchgrass Rhizosphere	MSSEVAVPEGTHTTHFEASLAAEHEAERDLLKSLMKSIIVAMPIMIVIFVLMTAIAISDKVDWYVWLGLGVGLGVLGAFLLGALA
Ga0167646_10127973	3300015192	Glacier Forefield Soil	MSAEVAVVEGTEPSSRFEQSLLAEQAAERDLLASIVRAILVSLPISIAVFLLMTAIAVSDQAEWYVWVSLGVGIGVVGAVLMGGLAGATLNAHKLDEVDRETYS*
Ga0132258_131298392	3300015371	Arabidopsis Rhizosphere	MSTEVAIPEAVSDRFEASLEREHEAERDLLKSLVKSILVSLPIMIGIFVLIAAIAISDKTEWYVWLGLGVGIGVIGACLLGSLAGATINAHKLDDVDRITQGLEPDSH*
Ga0182040_114123091	3300016387	Soil	MSTEVAVADGATTSRFEASLDAEHEAERDLMKSLVRAILLTMPVTIAIFVFIAAVAISDKAEWYVWLGLGVGLGVIGGILMGSLAGATINAHKLDDVDRHT
Ga0190270_108498071	3300018469	Soil	MSTEVVVADAAAARFEASLQAEAAAERDLVKSLVVAILVALPVSIAIFLVMTAIAISSKTEWYVWVSLGVGLGVIGAVLLGSLAGATLNAHKLDDVDLHTPRLG
Ga0190274_118401991	3300018476	Soil	MSTEVVVADAAAARFEASLQAEAAAERDLVKSLVVAILVALPVSIAIFLVMTAIAISSKTEWYVWVSLGVGLGVIGAVLLGSLAGATLNAHKLDDVDLHTYDA
Ga0190271_119134282	3300018481	Soil	MSTEVAVADTSASARFEASLRAEEAAERDLLKSLVIAILVALPISIAIFLFMTAIAISDKTEWYVWIGLGVGLGVIGALLLGALAGATLNAHKLDEVDHDRDTYGT
Ga0207693_101510623	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGSLAGATMNAHKFDEVDRHTYGA
Ga0207687_112399752	3300025927	Miscanthus Rhizosphere	EREHRAERDLLKALVKSILVSMPIMIGIFVLISAIAISDKTEWYVWVSLGVGLGVIGAFLLGALAGATLNAHKLDDVDRITAGLPPDSL
Ga0207687_117323292	3300025927	Miscanthus Rhizosphere	MSSEVAIPEDHAERFEASLTAENEAERDLLKSLVKSILVSLPIMIGIFLLIAAIAFSDKVEWYVWVSFGVGIGVIGAVLLGALAGATLNAHKLDEVDRIADGVDPHSV
Ga0207700_101153161	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSTEVAVTDGATTSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGSL
Ga0207644_104818132	3300025931	Switchgrass Rhizosphere	MSSEVAVVESAHSVRFEESLAAEQDAERSLMVTIVKTILISLPVMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVLGALLLGSLAGATLNAHRLDAVDRATYD
Ga0207704_103028122	3300025938	Miscanthus Rhizosphere	MSGEVAIPEDVAERFEDSLEREHEAERDLLKAIVKSILVSLPVMIGVFLLLAAIAFSDKVEWYVWVSFGVGIGVIGAVLLGALAGATLNAHKLDEVDRIADGVDPHSV
Ga0207712_117091321	3300025961	Switchgrass Rhizosphere	MSTEVAVPEGAGTSRFEASLAAEQVAERSLWVTIAKTILLSLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATISAHRLDAVDRATYD
Ga0207668_114555701	3300025972	Switchgrass Rhizosphere	MSTDVAVVESAGSSRFEQSLAAEEAAERTLWATVAKTIVLSLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATIAAHRLDAVDRA
Ga0207658_113234641	3300025986	Switchgrass Rhizosphere	TEVAVPEGTHTDHFEASLNAEHEAERDLLTSLVKAIVVSLPIMIGVFVLMTAIAISDKTEWYVWLGLGVGLGIIAAFLLGSLAGATLNAHKLDEVDRITAGLEPDAP
Ga0209068_100159083	3300027894	Watersheds	MSTDVAVVDGTTTERFQTSLATEQAAERDLLSSLAKSIVVALPISIAIFLFMTAVAISDKVEWYVWVGLGVGLGVIGAFLLGALAGATLNAHKLDEVDRITYGLSDHG
Ga0209068_101273372	3300027894	Watersheds	MSGEVAIPEDIAERYEDSLAREHEAERDLLKALVKAILVSLPILIGIFVLIAAIAISDKTEWYVWLSLGVGLGVIGAFLLGALAGATLNAHKLDDVDRITAGLPPDSL
Ga0209068_105187702	3300027894	Watersheds	MSSEVAVPDNTRSARFEESLAAEKAAERSLFTTIGKTILFALPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGTIGAVLLGSLAGVTMAAHRLDAVDRIAAGLDPEGP
Ga0209068_106051481	3300027894	Watersheds	MSTDVAVVDATATERFQASLATEQAAERDLLSSLVKSILVALPISIAIFLFMTAVAISDKVEWYVWIGLGVGLGVIGAFLLGSLAGATLNAHKLDEVDRITYGLSDHA
Ga0209069_100624963	3300027915	Watersheds	MSTEVAVADATTTARFQASLEAEQAAERDLLSSLVKSILVALPISIAIFLFMMAIAISDKVEWFVWISIGVGLGVIGALLLGSLAGATLNAHKLDDVDRVTYGLAPDHDAH
Ga0268266_102943312	3300028379	Switchgrass Rhizosphere	MSTEVAIPESTHSARFEESLAAEQEAERSLFVTIVKTIVISLPIMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATIAAHRLDAVDRATYD
Ga0268264_125520922	3300028381	Switchgrass Rhizosphere	SSEVAVVESAHSVRFEESLAAEQDAERSLMVTIVKTILISLPVMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVLGALLLGSLAGATLNAHRLDAVDRATYD
Ga0265334_103496662	3300028573	Rhizosphere	DVAIPESTHRARFEESLAAEQAAERGLFVSIVRTIVISLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATMAAHRLDAVDRATYGLEPDAA
Ga0307306_101373342	3300028782	Soil	MSSEVAIPESTHSARFEESLAAEQAAERGLFVTITKTVLISLPIMVGIFLLMTLIAISDKTEWYIWVGLGVGLG
Ga0307283_100985412	3300028790	Soil	MSGEVAIPEDVAERFEDSLEREHRAERDLLKALVKSILVSLPIMIGIFVLISAIAISDKTEWYVWLLLGVGLGVIGAFLLGALAGATLNAHKLDDVDRITAGLPPDSH
Ga0307296_100919643	3300028819	Soil	MSTEVAVAGETAASRFEASLAAEAAAERDLLKSLVMAILVALPISIAIFLFMTAIAISDKAEWYVWISLGVGLGVIGAILLGALAGATLNAHKLDDVDRHTYGA
Ga0307314_102646601	3300028872	Soil	HRARFEESLAAEQDAERGLMVTCVKTVLISLPIMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVIGAILLGSLAGATMAAHRLDAVDRATYD
Ga0311332_106936741	3300029984	Fen	MSTEVAVPEATQSTRFEESLAAEQAAEHGLLVTIVKTILISLPIMIGIFLLMTLIAISDKTEWYVWVGLGVGLGVIGAILLGSLAGATIAAHRLDAVDRATYD
Ga0265320_102105412	3300031240	Rhizosphere	MSTDVAIPESTHRARFEESLAAEQAAERGLFVSIVRTIVISLPVMIGIFLLMTAIAISDKTEWYVWVGLGVGLGVIGACLLGSLAGATMAAHRLDAVDRATYGLEPDAA
Ga0265327_100872952	3300031251	Rhizosphere	MSTEVAIPQSTHQARFEESLAAEQAAEHGLFVTIAKTIVISLPIMIGIFLLMTAIAISDKTEWYVWVGLGVGLGFIGAVLLGSLAGATIAAHRLDAVDRATYGLEPEAP
Ga0318571_103709612	3300031549	Soil	MSTEVAVADGATTSRFEASLDAEHEAERDLMKSLVRAILLTMPVTIAIFVFIAAVAISDKAEWYVWLGLGVGLGVLGGILMGSLAGATINAHKLDDVDRHTYGA
Ga0307469_124896011	3300031720	Hardwood Forest Soil	MSSEVAVPEGTHTTHFEASLAAEHDAERDLLKSLVKSIIVAMPIMIGIFGLMTAIAISDKVDWYVWLGLGVGLGVLGAFLLGALAGATLNAHKLDNVDRITAGLEPD
Ga0306918_111960571	3300031744	Soil	MSTEVAVADGATTSRFEASLDAEHEAERDLMKSLVRAILLTMPVTIAIFVFIAAVAISDKAEWYVWLGLGVGLGVIGGILMGSLAGATINAHKLDDVDRH
Ga0306924_116253301	3300032076	Soil	MSGEVAIPDAQSERFEASLDAEHEAERDLLRSVAKAIMVSLPIMIGVFVLMCAIAISDKTDWFVWLGLGVGLGVIAAFLLGALAGATLNAHKLDEVDRVTAGLDPHAP
Ga0307470_102187873	3300032174	Hardwood Forest Soil	TSRFEASLEAEHEAERDLMKALVRSILLTMPVTIAIFVFIAAVAISDKTEWYVWLSLGVGLGVIGGVLMGSLAGATMNAHKLDEVDRHTYGA
Ga0306920_1005586373	3300032261	Soil	MSTEVAVADGATTSRFEASLDAEHEAERDLMKSLVRAILLTMPVTIAIFVFIAAVAISDKAEWYVWLGLGVGLGVIGGILMGSLAGATINAHKLDDVDRHTYGA
Ga0335084_108315271	3300033004	Soil	GTTPAAAAGHESRGPSMSTEVAVPEGTHTAHFEASLEAEQEAERDLLKSLVKSIVVSLPIMIGVFVLMTAIAISDKTDWYVWLGLGVGLGIIAAFLLGSLAGATINAHKLDDVDRITAGLEPDAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083203

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences