Metagenome / Metatranscriptome Family F083194

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083194
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	65 residues
Representative Sequence	TCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ
Number of Associated Samples	103
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.65 %
% of genes near scaffold ends (potentially truncated)	93.81 %
% of genes from short scaffolds (< 2000 bps)	93.81 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.230 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.850 % of family members)
Environment Ontology (ENVO)	Unclassified (15.044 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.708 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.26% β-sheet: 15.22% Coil/Unstructured: 81.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF09948	DUF2182	74.34
PF01019	G_glu_transpept	6.19
PF01548	DEDD_Tnp_IS110	1.77
PF07040	DUF1326	1.77
PF07377	DUF1493	0.88
PF00106	adh_short	0.88
PF02627	CMD	0.88
PF04392	ABC_sub_bind	0.88
PF13751	DDE_Tnp_1_6	0.88
PF03061	4HBT	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	6.19
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.77
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	1.77
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.88
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.23 %
Unclassified	root	N/A	1.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.23 %
Unclassified	root	N/A	1.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.23 %
Unclassified	root	N/A	1.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.84 %
Unclassified	root	N/A	1.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	80.53 %
Unclassified	root	N/A	1.77 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	55.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.54 %
Unclassified	root	N/A	1.77 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.54 %
Unclassified	root	N/A	1.77 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.88 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.54 %
Unclassified	root	N/A	1.77 %
Aquisediminimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Aquisediminimonas	0.88 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.54 %
Unclassified	root	N/A	1.77 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.88 %
Aquisediminimonas profunda	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Aquisediminimonas → Aquisediminimonas profunda	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004052\|Ga0055490_10279953	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300004463\|Ga0063356_102223811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300004463\|Ga0063356_102894259	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005295\|Ga0065707_10786640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300005332\|Ga0066388_103713769	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005332\|Ga0066388_108569225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300005336\|Ga0070680_101616887	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005364\|Ga0070673_101689751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300005439\|Ga0070711_101404403	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005467\|Ga0070706_101901622	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005537\|Ga0070730_10578756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300005545\|Ga0070695_101482127	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005548\|Ga0070665_100800458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	956	Open in IMG/M
3300005548\|Ga0070665_100895229	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005552\|Ga0066701_10518288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300005563\|Ga0068855_101106983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	828	Open in IMG/M
3300005614\|Ga0068856_101170384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300005614\|Ga0068856_101742220	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005615\|Ga0070702_101373710	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005615\|Ga0070702_101468032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300005875\|Ga0075293_1072367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300006052\|Ga0075029_101001631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300006086\|Ga0075019_10489074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300006102\|Ga0075015_100045420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2059	Open in IMG/M
3300006172\|Ga0075018_10421299	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300006174\|Ga0075014_100314437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300006175\|Ga0070712_101150267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300006175\|Ga0070712_101970296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300006638\|Ga0075522_10093507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1640	Open in IMG/M
3300006806\|Ga0079220_10101831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1491	Open in IMG/M
3300006847\|Ga0075431_101265153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	699	Open in IMG/M
3300006904\|Ga0075424_100819189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300009094\|Ga0111539_13182792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300009521\|Ga0116222_1346165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300009672\|Ga0116215_1145160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1055	Open in IMG/M
3300009792\|Ga0126374_10392711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300010048\|Ga0126373_12020732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300010159\|Ga0099796_10315708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300010362\|Ga0126377_10077370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2977	Open in IMG/M
3300010376\|Ga0126381_100532886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300010396\|Ga0134126_12302911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300010399\|Ga0134127_10585518	All Organisms → cellular organisms → Bacteria → Proteobacteria	1142	Open in IMG/M
3300010400\|Ga0134122_13385358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300010403\|Ga0134123_12188777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300012004\|Ga0120134_1106219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300012487\|Ga0157321_1043581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300012930\|Ga0137407_10327597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1406	Open in IMG/M
3300012948\|Ga0126375_10153592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1455	Open in IMG/M
3300012971\|Ga0126369_11169682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300012971\|Ga0126369_12294450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300012985\|Ga0164308_11244069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300013102\|Ga0157371_10541277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300013297\|Ga0157378_12861862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300013308\|Ga0157375_13000591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300013831\|Ga0120126_1009977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300014056\|Ga0120125_1155537	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300014256\|Ga0075318_1067235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300014263\|Ga0075324_1031907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	972	Open in IMG/M
3300016404\|Ga0182037_10732596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	848	Open in IMG/M
3300016422\|Ga0182039_10103792	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300016422\|Ga0182039_10361258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1222	Open in IMG/M
3300017930\|Ga0187825_10120596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300017933\|Ga0187801_10399270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300017946\|Ga0187879_10614880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300017955\|Ga0187817_10651886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300017973\|Ga0187780_10306266	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300017974\|Ga0187777_11293797	Not Available	535	Open in IMG/M
3300017974\|Ga0187777_11403175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	516	Open in IMG/M
3300017993\|Ga0187823_10184008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300018032\|Ga0187788_10376223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300018089\|Ga0187774_10790582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300020082\|Ga0206353_11687358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300020231\|Ga0212168_1277639	All Organisms → cellular organisms → Bacteria → Proteobacteria	2471	Open in IMG/M
3300020423\|Ga0211525_10046622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2078	Open in IMG/M
3300021170\|Ga0210400_10680288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300021406\|Ga0210386_11534143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300021432\|Ga0210384_11269602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300025780\|Ga0210100_1024756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300025912\|Ga0207707_10441359	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300025917\|Ga0207660_11365280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300026067\|Ga0207678_10930409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	769	Open in IMG/M
3300026075\|Ga0207708_10161392	All Organisms → cellular organisms → Bacteria → Proteobacteria	1770	Open in IMG/M
3300027662\|Ga0208565_1131557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300027854\|Ga0209517_10592611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300027857\|Ga0209166_10626673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300027898\|Ga0209067_10218988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300028587\|Ga0247828_10319177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300029636\|Ga0222749_10493055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300031716\|Ga0310813_10438701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1131	Open in IMG/M
3300031720\|Ga0307469_11392835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300031740\|Ga0307468_101891460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Aquisediminimonas → Aquisediminimonas profunda	568	Open in IMG/M
3300031747\|Ga0318502_10348397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300031781\|Ga0318547_10257846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300031796\|Ga0318576_10350474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300031804\|Ga0310124_10353082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300031854\|Ga0310904_11297303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300031910\|Ga0306923_12463154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300031965\|Ga0326597_10164202	All Organisms → cellular organisms → Bacteria → Proteobacteria	2638	Open in IMG/M
3300032001\|Ga0306922_10621852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1143	Open in IMG/M
3300032001\|Ga0306922_11870968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300032012\|Ga0310902_11282018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300032041\|Ga0318549_10396755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300032059\|Ga0318533_11068391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300032076\|Ga0306924_10718847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1120	Open in IMG/M
3300032160\|Ga0311301_12393732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300032261\|Ga0306920_102593472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300032278\|Ga0310345_10863500	Not Available	882	Open in IMG/M
3300032515\|Ga0348332_13865535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300032892\|Ga0335081_10296963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2143	Open in IMG/M
3300033289\|Ga0310914_11569489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300033809\|Ga0314871_024386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300034147\|Ga0364925_0155648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	831	Open in IMG/M
3300034690\|Ga0364923_0144686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.84%
Host-Associated	Host-Associated	14.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.80%
Aquatic	Environmental → Aquatic	15.04%
Plants	Host-Associated → Plants	14.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.85%
Marine	Environmental → Aquatic → Marine	5.31%
Sediment	Environmental → Aquatic → Sediment	5.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.31%
Freshwater	Environmental → Aquatic → Freshwater	4.42%
Floodplain	Environmental → Terrestrial → Floodplain	1.77%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.79%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.54%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.77%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.65%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.89%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.89%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment	0.89%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014256	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D2	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020231	Deep-sea sediment microbial communities from the Mariana Trench, Pacific Ocean - CR04	Environmental	Open in IMG/M
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025780	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033809	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_D	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055490_102799531	3300004052	Natural And Restored Wetlands	PEVVPGFLTVGQAKRNVVKGAFGRNWDWSQRSSKHIAFDLRGPKAFTWRRSLEAQ*
Ga0063356_1022238111	3300004463	Arabidopsis Thaliana Rhizosphere	DTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKTQ*
Ga0063356_1028942592	3300004463	Arabidopsis Thaliana Rhizosphere	FMVPEGDTCRLYNAPRPEVVPGFITVGQAKRNVVTGAFGRNWDLSQRSAKHIAFDLRGPKTFTWRKPFSSR*
Ga0065707_107866402	3300005295	Switchgrass Rhizosphere	VVPGFLTVGQAKRNVVTGAFGRRWDWSERSSKHIAFDLRGPKAFTWRKALQSQ*
Ga0066388_1037137691	3300005332	Tropical Forest Soil	EGDTCRIYNAPRPEVVPGFLTVGQAKRNIVTGAFGRTFNWSERSSKHIAFDLRGPKTFSWRQPLKPQ*
Ga0066388_1085692252	3300005332	Tropical Forest Soil	VPGFLTVGQAKRNIVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ*
Ga0070680_1016168872	3300005336	Corn Rhizosphere	TCRIYNAPRPEVVPGFLTVGEAKRNIVTGAFGRSWDWSQRSSKHIAFDLRGPKTFSWRQPLQGQ*
Ga0070673_1016897511	3300005364	Switchgrass Rhizosphere	EGDTCRIYNAPRPEVVPGFLTVGTAHRNVVTGAFGRKWDWSARSSKHIAFDLRGPQAFSWRKSLQKQ*
Ga0070711_1014044031	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ*
Ga0070706_1019016222	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PRPEVVPGFLTVGQAKRNLVTGAFGRNWDWSQRSSKHILFDLRGPKAFSWRQSLPQQ*
Ga0070730_105787561	3300005537	Surface Soil	VPGLVDGLGGPYRKYMVPANDTCRIYNAPRPEVVPSFLTVGEAKRNVVTGAFGRKWDWSMRSSKHIAFDLRGPKTFSWRQPLKGQ*
Ga0070695_1014821272	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VPGFLTVGQAKRNVVTGAFGRNWDWSNRSSKHIAFDLRGPKAFSWRQSLRVQ*
Ga0070665_1008004582	3300005548	Switchgrass Rhizosphere	PEVVPGFLTVGQAKRNVVTGAFGRTFDWSERSSKHIAFDLRGPKTFSWRQPLKGP*
Ga0070665_1008952291	3300005548	Switchgrass Rhizosphere	VPPGDTCRIYNAPRPEVVPGFLTVGEAKRNIVTGAFGRSWDWSQRSSKHIAFDLRGPKTFSWRQPLQGQ*
Ga0066701_105182881	3300005552	Soil	IYNAPRPEVVPGFLTVGQAKRNVVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ*
Ga0068855_1011069832	3300005563	Corn Rhizosphere	LGGPFRKYMVPDGDTCRIYNAPRPEVVPGFLTVGQAKRNVVSGAFGRNWDWSNRSSKHIAFDLRGPKAFSWRQSLRVQ*
Ga0068856_1011703842	3300005614	Corn Rhizosphere	PFRKYMVPEGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ*
Ga0068856_1017422202	3300005614	Corn Rhizosphere	NAPRPEVVPGFLTVGTAKRNVVSGAFGRNWDWSNRSSKHIAFDLRGPKAFSWRQSLRVQ*
Ga0070702_1013737101	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RIYNAPRPEVVPGFLTVGEAKRNIVTGAFGRSWDWSQRSSKHIAFDLRGPKTFSWRQPLQGQ*
Ga0070702_1014680322	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MVPDGDTCRIYNAPRPEVVPGFLTVGQAKRNIVTGAFGRFFDWSQRSSKHISFDLRGPKTFSWRQPLKGP*
Ga0075293_10723671	3300005875	Rice Paddy Soil	GLGGPFRKYMVPDGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKTFSWRAPLQGR*
Ga0075029_1010016312	3300006052	Watersheds	RKYMVPEGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFTWRQSLTAQ*
Ga0075019_104890742	3300006086	Watersheds	MVPPSDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPRPFSWRQPLKGE*
Ga0075015_1000454202	3300006102	Watersheds	MVPPSDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPRPFS*
Ga0075018_104212992	3300006172	Watersheds	FRKYMVPPNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPRPFS*
Ga0075014_1003144371	3300006174	Watersheds	MVPPNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPRPFS*
Ga0070712_1011502671	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GPYRKYMVPSNDTCRIYNPPRPEVVPGFLTVGQATRNVVTEAFGRNWDWSMRSSKHIAFDLRGPKTFSWRQPLKGR*
Ga0070712_1019702961	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KYMVPEGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ*
Ga0075522_100935073	3300006638	Arctic Peat Soil	YMVPPGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFNRNWDWSERSSKHIAFDLRGPNTFSWRAPLKGQ*
Ga0079220_101018311	3300006806	Agricultural Soil	NAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ*
Ga0075431_1012651532	3300006847	Populus Rhizosphere	TCRLYNAPRPEVVPGFITVGQAKRNVVTGAFGRNWDLSQRSAKHIAFDLRGPKAFTWRKPFATR*
Ga0075424_1008191892	3300006904	Populus Rhizosphere	RIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ*
Ga0111539_131827922	3300009094	Populus Rhizosphere	GFLTVGQAKRNVVTGAFGRRWDWSERSSKHIAFDLRGPKAFTWRKALQSQ*
Ga0116222_13461652	3300009521	Peatlands Soil	MTVTHDAESWRVEVPGLVDGLGGPYRKYMVPSNDACRIYNAPRPEVVPGLLTVGQATRNVVTGAFGRNWDWSMRSS
Ga0116215_11451601	3300009672	Peatlands Soil	GLVDGLGGPFRKYMVPSNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWPMRSSKHIGFDLRGPKTFSWRQPLKGQ*
Ga0126374_103927112	3300009792	Tropical Forest Soil	NAPRPEVVPGFLTVGQAKRNIVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ*
Ga0126373_120207322	3300010048	Tropical Forest Soil	EVVPGFLTVGQAKRNIVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ*
Ga0099796_103157082	3300010159	Vadose Zone Soil	PGDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRSWDWSQRSSKHIAFDLRGPKSFSWRQPLKGQ*
Ga0126377_100773705	3300010362	Tropical Forest Soil	PEVVPGFLTVGQAKRNIVTGAFGRTFDWSQRSSKHIAFDLRGPKTFSWRQPLKTQ*
Ga0126381_1005328861	3300010376	Tropical Forest Soil	PRPEVVPGFLTVGQAKRNIVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKLQ*
Ga0134126_123029112	3300010396	Terrestrial Soil	PENDTCRIYNAPRPEVVPGFIILGHAKRNVVTGAFGRKWDWTDRSAKHIAFDLRGPKTFTWRQPLKTQ*
Ga0134127_105855183	3300010399	Terrestrial Soil	GFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ*
Ga0134122_133853581	3300010400	Terrestrial Soil	PEVVPGFLTVGQAKRNVVTGAFGRTFDWSERSSKHIAFDLRGPKAFSWRQSLQAQ*
Ga0134123_121887771	3300010403	Terrestrial Soil	PRPEVVPGFLTVGQAKRNIVTGAFGRNFDWSERSSKHIAFDLRGPKTFSWRQPLKVQ*
Ga0120134_11062191	3300012004	Permafrost	VPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQSLKAQ*
Ga0157321_10435811	3300012487	Arabidopsis Rhizosphere	GFLTVGQAKRNIVTGAFGRTFDWSQRSSKHIAFDLRGPKTFSWRQPLKVQ*
Ga0137407_103275973	3300012930	Vadose Zone Soil	RIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNFDWSQRSSKHIAFDLRGPKTFSWRQPVKGQ*
Ga0126375_101535921	3300012948	Tropical Forest Soil	PGFLTVGQAKRNIVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ*
Ga0126369_111696821	3300012971	Tropical Forest Soil	APRPEVVPGFLTVGQAKRNIVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRRSLKSQ*
Ga0126369_122944501	3300012971	Tropical Forest Soil	EGDTCRIYNAPRPEVVPGFLTVGQAKRNIVTGAFGRTFDWSQRSSKHIAFDLRGPKTFSWRQPLKSQ*
Ga0164308_112440691	3300012985	Soil	QTCGIYNAPRAEVVPGFLTVCQARRNIVTGAFGRFFDWSQRSSKHIAFDLRGPKTFSWRKPLHGQ*
Ga0157371_105412771	3300013102	Corn Rhizosphere	PRPEVVPGFLTVGTAHKNKVTGAFGRLFDWGGRSSKHIAFDLRGPKTFSWRTSLQKQ*
Ga0157378_128618621	3300013297	Miscanthus Rhizosphere	TCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ*
Ga0157375_130005911	3300013308	Miscanthus Rhizosphere	IYNAPRPEVVPGFLTVGQARRNIVTGAFGRFFDWSQRSSKHIAFDLRGPKTFSWRKPLHGQ*
Ga0120126_10099772	3300013831	Permafrost	PEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQSLKAQ*
Ga0120125_11555372	3300014056	Permafrost	LPQLEREVVPGFLTVGTAKRNVVTGAFGRKWDWSNRSSKHIAFDLRGPKTFTWRNPLRTQ
Ga0075318_10672352	3300014256	Natural And Restored Wetlands	VPENDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRKSQQAQ*
Ga0075324_10319071	3300014263	Natural And Restored Wetlands	TCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRKSQQAQ*
Ga0182037_107325962	3300016404	Soil	GGPFRKYMVPENDTCRIYNAPRPEVVPGFLTVGQAKRNAVTGAFGRDWDWAQRSSKHIAFDLRGPKTFSWRKSLQNQ
Ga0182039_101037921	3300016422	Soil	PEVVPGFLTVGQARRNVVTGAFGRKWDWSQRSSKHIAFDLRGPKAFSWRQALPSQ
Ga0182039_103612581	3300016422	Soil	PEGDTCRIYNAPRPEVVPGFLTVGQAKRNIVTGAFGRSFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ
Ga0187825_101205961	3300017930	Freshwater Sediment	TCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRKWDWSQRSSKHIAFDLRGPKAFTWRQSLTAQ
Ga0187801_103992702	3300017933	Freshwater Sediment	PSNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPKTFSWRQPLKGQ
Ga0187879_106148802	3300017946	Peatland	DGLGGPYRKYMVPSDDTCRIYNAPRPEVVPGFLTVGEAKRNLVTGAFGRNWDWSKRSSKHIAFDLRGPKTFSWRQPLKDQ
Ga0187817_106518861	3300017955	Freshwater Sediment	DRYTRRRELACSIDGLGGPFRKYMVPSNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPKTFSWRQPLKDQ
Ga0187780_103062661	3300017973	Tropical Peatland	YNAPRPEVVPGFLTVGQAKRNVITGPFGRFWDWTARSSKHIAFDLRGPKLFTWRKSLQNQ
Ga0187777_112937972	3300017974	Tropical Peatland	RPEVVPGFLTVGQARRNLVSGAFGRTWDWSQRSSKHIAFDLRGPKAFSWRQSLQYQ
Ga0187777_114031751	3300017974	Tropical Peatland	NAPRPEVVPGFLTVGQAKRNVITGPFGRFWDWTARSSKHIAFDLRGPKLFTWRKSLQNQ
Ga0187823_101840082	3300017993	Freshwater Sediment	RPEVVPGFLTVGQAKRNVVTGAFGRSWDWSQRSSKHIAFDLRGPKTFTWRQSLNAQ
Ga0187788_103762232	3300018032	Tropical Peatland	GPFRKYMVPEGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSNRSSKHIAFDLRGPKTFSWRQSLQAQ
Ga0187774_107905821	3300018089	Tropical Peatland	APRPEVVPGFLTVGQAKRNVVTGPFGRNWDWSNRSSKHIAFDLRGPKAFSWRQSLQTQ
Ga0206353_116873582	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VPEGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ
Ga0212168_12776395	3300020231	Sediment	IYNAPRPEVTPGYLTVGQAARNIVTGVFGRKWDWSKRSSKHIEFDLRGPDPFTWREPLA
Ga0211525_100466221	3300020423	Marine	NDTCRIYNAPRPEVTPGYLTLGQAARNIVTGAFGRNWDWSKRSSKHISFDLHGPDPFSWQKPLN
Ga0210400_106802881	3300021170	Soil	YRKYMVPSNDTCRIYNAPRPEVVPGFLTVGQATRNVVTEAFGRNWDWSMRSSKHIAFDQRGPKTFSWRQPLKGR
Ga0210386_115341432	3300021406	Soil	RPEVVPGFLTVGQATRNVVTEAFGRNWDWSMRSSKHIAFDLRGPKTFSWRQPLKGR
Ga0210384_112696022	3300021432	Soil	EGDTSRIYNAPRPEVVPGFLTVGQAKRNIVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKSQ
Ga0210100_10247561	3300025780	Natural And Restored Wetlands	RPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRKSQQAQ
Ga0207707_104413593	3300025912	Corn Rhizosphere	KYMVPEADTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNWDWSQRSSKHIAFDLRGPKAFSWRQALKVQ
Ga0207660_113652802	3300025917	Corn Rhizosphere	TCRIYNAPRPEVVPGFLTVGEAKRNIVTGAFGRSWDWSQRSSKHIAFDLRGPKTFSWRQPLQGQ
Ga0207678_109304091	3300026067	Corn Rhizosphere	PEVVPGFLTVGQARRNIVTGAFGRFFDWSQRSSKHIAFDLRGPKTFSWRKPLHGQ
Ga0207708_101613924	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VPDGDTCRIYNAPRPEVVPGFLTVGQAKRNIVTGAFGRNFDWSERSSKHIAFDLRGPKTFSWRQPLKVQ
Ga0208565_11315572	3300027662	Peatlands Soil	GLVDGLGGPFRKYMVPSNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWPMRSSKHIGFDLRGPKTFSWRQPLKGQ
Ga0209517_105926112	3300027854	Peatlands Soil	GLVDGLGGPFRKYMVPSNDTCRIYNAPRPEVVPGFLTVGEAKRNLVTGAFGRNWDWSMRSSKHIAFDLRGPKTFS
Ga0209166_106266731	3300027857	Surface Soil	PYRKYMVPANDTCRIYNAPRPEVVPSFLTVGEAKRNVVTGAFGRKWDWSMRSSKHIAFDLRGPKTFSWRQPLKGQ
Ga0209067_102189882	3300027898	Watersheds	MVPPSDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPRPFSWRQPLKGE
Ga0247828_103191771	3300028587	Soil	VVPGFLTVGQAKRNVVTGAFGRFFDWSERSSKHIAFDLRGPKTFSWRQPLKGQ
Ga0222749_104930551	3300029636	Soil	RKYMVPSNDTCRIYNAPRPEVVPGFLTVGQATRNVVTGAFGRNWDWSMRSSKHIAFDLRGPKTFSWRQPLKGR
Ga0310813_104387011	3300031716	Soil	EVVPGFLTVGTAHKNIVTGAFKRVFNWNGRSSKHIAFDLRGPKTFSWRTSLQKQ
Ga0307469_113928352	3300031720	Hardwood Forest Soil	RPEVVPGFLTVGQAKRNIVTGAFGRNFDWSERSSKHIAFDLRGPKTFSWRQPLKVQ
Ga0307468_1018914601	3300031740	Hardwood Forest Soil	RVEVPGMVDGLGGPYRKFMVPENDTCRIYNAPRPEVVPGFITLGQAKRNVVTGAFGRHWDLSQRSSKHITFDLRGPKAFTWRKPFSR
Ga0318502_103483972	3300031747	Soil	YNAPRPEVVPGFITVGQARRNVVTGAFGRRWDLSERSAKHIAFDLRGPKAFTWRRPLATG
Ga0318547_102578461	3300031781	Soil	GLGGPFRKFMVPANDTCRIYNAPRPEVVPGFLTVGQARRNVVTGAFGRKWDWSQRSSKHIAFDLRGPKAFSWRQALPSQ
Ga0318576_103504742	3300031796	Soil	RVSHDAENWCVEVPGLVEGLGGPFRKFMVPEGDTCRLYNAPRPEVVPGFITVGQARSNVVTGAFGRRWDLSERSAKHIAFDLRGPKAFTWRRPLATG
Ga0310124_103530822	3300031804	Marine	NDTCRIYNAPRPEVTPGFITLGRALRNVVTGAFGRNWDWSERSAKWIPFDMRGPDSFTWQKPRE
Ga0310904_112973031	3300031854	Soil	IYNAPRPEVVPGFLTVGQAKRNVVTGAFGRNFDWSERSSKHIAFDLRGPKTFSWRQPLKG
Ga0306923_124631542	3300031910	Soil	DAENWRVQIVDGLGGPFRKYMVPENDTCRIYNAPRPEVVPGFLTVGQAKRNAVTGAFGRDWDWAQRSSKHIAFDLRGPKTFSWRKSLQNQ
Ga0326597_101642024	3300031965	Soil	VEVPGLIEGLGGPYRKYMVPDNDTCRIYNAPRPEVVPGHITLGHALRNVVSGAFGRNWDWSGRSAKHIGFDLRGPKTFTWRQSLAKQ
Ga0306922_106218521	3300032001	Soil	MVPEGDTCRLYNAPRPEVVPGFITVGQARRNVVTGAFGRRWDLSERSAKHIAFDLRGPKAFTWRRPLATG
Ga0306922_118709681	3300032001	Soil	ENDTCRIYNAPRPEVVPGFLTVGQARRNLVTGAFGRTWDWSQRSSKHIAFDLRGPKAFSWRQSLQSQ
Ga0310902_112820182	3300032012	Soil	EGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRRWDWSERSSKHIAFDLRGPKAFTWRKALQSQ
Ga0318549_103967551	3300032041	Soil	RPEVVPGFLTVGQARRNLVTGAFGRTWDWSQRSSKHIAFDLRGPKAFSWRQSLQSQ
Ga0318533_110683911	3300032059	Soil	VVPGFLTVGQAKRNAVTGAFGRDWDWAQRSSKHIAFDLRGPKTFSWRKSLQNQ
Ga0306924_107188473	3300032076	Soil	PEVVPGFLTVGQAKRNAVTGAFGRDWDWAQRSSKHIAFDLRGPKTFSWRKSLQNQ
Ga0311301_123937322	3300032160	Peatlands Soil	DGLGGPYRKYMVPSNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRNWDWSMRSSKHIAFDLRGPKTFSWRQPLKGQ
Ga0306920_1025934722	3300032261	Soil	PFRKFMVPENDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRRWDWSQRSSKHIAFDLRGPQIFSWRQPLPGR
Ga0310345_108635001	3300032278	Seawater	EVTPGYLTLGQAALNVVTGAFGRSWDWSKRSSKHIAFDLTGPDAFTWREPLK
Ga0348332_138655351	3300032515	Plant Litter	GGPYRKYVVPSNDTCRIYNAPRPEVVPGFLTVGEAKRNVVTGAFGRSWDWSMRSSKHIAFDLRGPKTFSWRQPLKGQ
Ga0335081_102969631	3300032892	Soil	RPEVVPGFLTVGQAKRNIVTGAFGRKWDWSNRSSKHIAFDLRGPKTFTWRNPLQSQ
Ga0310914_115694891	3300033289	Soil	VDGLGGPFRKYMVPENDTCRIYNAPRPEVVPGFLTVGQAKRNAVTGAFGRDWDWAQRSSKHIAFDLRGPKTFSWRKSLQNQ
Ga0314871_024386_338_523	3300033809	Peatland	IYNAPRPEVVPGFLTVGTAKRNVVTGAFGRNWDWSNRSSKHIAFDLRGPKTFSWRQSLQT
Ga0364925_0155648_44_256	3300034147	Sediment	MVPEGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRFFDWSERSSKHIAFELRGPKTFSWRQPLKGQ
Ga0364923_0144686_413_616	3300034690	Sediment	EGDTCRIYNAPRPEVVPGFLTVGQAKRNVVTGAFGRTFDWSERSSKHIAFDLRGPKSFSWRKSLKTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083194

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences