Metagenome Family F083174

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083174
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	54 residues
Representative Sequence	VSVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR
Number of Associated Samples	97
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.31 %
% of genes near scaffold ends (potentially truncated)	95.58 %
% of genes from short scaffolds (< 2000 bps)	88.50 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (33.628 % of family members)
Environment Ontology (ENVO)	Unclassified (46.903 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.14% Coil/Unstructured: 56.86%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF08734	GYD	43.36
PF13884	Peptidase_S74	5.31
PF13650	Asp_protease_2	4.42
PF07963	N_methyl	4.42
PF13544	Obsolete Pfam Family	2.65
PF12779	WXXGXW	1.77
PF13517	FG-GAP_3	1.77
PF13414	TPR_11	0.88
PF03544	TonB_C	0.88
PF05935	Arylsulfotrans	0.88
PF00534	Glycos_transf_1	0.88
PF00583	Acetyltransf_1	0.88
PF00271	Helicase_C	0.88
PF00491	Arginase	0.88
PF03466	LysR_substrate	0.88
PF00561	Abhydrolase_1	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	43.36
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.88
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	84.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	84.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	57.52 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.52 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.52 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.77 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.52 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.77 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005166\|Ga0066674_10228127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	885	Open in IMG/M
3300005172\|Ga0066683_10496202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	746	Open in IMG/M
3300005176\|Ga0066679_10243605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1157	Open in IMG/M
3300005176\|Ga0066679_10988869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	525	Open in IMG/M
3300005180\|Ga0066685_10448691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300005181\|Ga0066678_10704380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	672	Open in IMG/M
3300005186\|Ga0066676_10264003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1128	Open in IMG/M
3300005187\|Ga0066675_10745775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300005289\|Ga0065704_10332281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300005290\|Ga0065712_10640937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300005334\|Ga0068869_100802050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	809	Open in IMG/M
3300005336\|Ga0070680_101429255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300005338\|Ga0068868_100325233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1311	Open in IMG/M
3300005340\|Ga0070689_101950535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005354\|Ga0070675_100049644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3444	Open in IMG/M
3300005356\|Ga0070674_100536583	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005364\|Ga0070673_100520832	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005445\|Ga0070708_102011362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300005450\|Ga0066682_10407680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	870	Open in IMG/M
3300005451\|Ga0066681_10466475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	776	Open in IMG/M
3300005454\|Ga0066687_10055726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1861	Open in IMG/M
3300005457\|Ga0070662_100576672	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005518\|Ga0070699_100145742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2092	Open in IMG/M
3300005554\|Ga0066661_10115994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1615	Open in IMG/M
3300005554\|Ga0066661_10174926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1322	Open in IMG/M
3300005555\|Ga0066692_10324528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	976	Open in IMG/M
3300005555\|Ga0066692_10480821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	791	Open in IMG/M
3300005561\|Ga0066699_10015208	All Organisms → cellular organisms → Bacteria	4030	Open in IMG/M
3300005561\|Ga0066699_10230784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1300	Open in IMG/M
3300005561\|Ga0066699_10657469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	751	Open in IMG/M
3300005574\|Ga0066694_10017275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3144	Open in IMG/M
3300005575\|Ga0066702_10130502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1469	Open in IMG/M
3300005576\|Ga0066708_10144347	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1457	Open in IMG/M
3300005718\|Ga0068866_10061010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1957	Open in IMG/M
3300006031\|Ga0066651_10396330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300006173\|Ga0070716_100053605	All Organisms → cellular organisms → Bacteria	2300	Open in IMG/M
3300006796\|Ga0066665_10586260	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300006800\|Ga0066660_10261502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1360	Open in IMG/M
3300006800\|Ga0066660_11659782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	508	Open in IMG/M
3300009176\|Ga0105242_10049356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3425	Open in IMG/M
3300009553\|Ga0105249_13534671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300010320\|Ga0134109_10432998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300010321\|Ga0134067_10129487	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300010333\|Ga0134080_10429386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300010364\|Ga0134066_10355145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300012200\|Ga0137382_10072539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2211	Open in IMG/M
3300012202\|Ga0137363_11784368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	508	Open in IMG/M
3300012203\|Ga0137399_10875386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	756	Open in IMG/M
3300012205\|Ga0137362_11737688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300012208\|Ga0137376_10586200	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	965	Open in IMG/M
3300012208\|Ga0137376_11146613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	665	Open in IMG/M
3300012210\|Ga0137378_10215120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1789	Open in IMG/M
3300012359\|Ga0137385_10627639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	902	Open in IMG/M
3300012361\|Ga0137360_11412751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	599	Open in IMG/M
3300012582\|Ga0137358_10204559	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300012912\|Ga0157306_10297749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300012917\|Ga0137395_10834918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	667	Open in IMG/M
3300012922\|Ga0137394_11227718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300012923\|Ga0137359_10134313	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300012924\|Ga0137413_10257893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1200	Open in IMG/M
3300012924\|Ga0137413_10612992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300012929\|Ga0137404_10146483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1959	Open in IMG/M
3300012929\|Ga0137404_11625861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300012930\|Ga0137407_10109043	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300012938\|Ga0162651_100085924	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300012989\|Ga0164305_12095204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300013296\|Ga0157374_11302372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300013307\|Ga0157372_11137013	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300014150\|Ga0134081_10024672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1712	Open in IMG/M
3300014157\|Ga0134078_10140648	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300014157\|Ga0134078_10223263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300015356\|Ga0134073_10280091	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300015357\|Ga0134072_10264123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	626	Open in IMG/M
3300015357\|Ga0134072_10332125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300015357\|Ga0134072_10433648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	526	Open in IMG/M
3300018431\|Ga0066655_10932918	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300018431\|Ga0066655_11428999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300018482\|Ga0066669_10642380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	933	Open in IMG/M
3300019789\|Ga0137408_1262787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1149	Open in IMG/M
3300019868\|Ga0193720_1044707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300019875\|Ga0193701_1098861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300019886\|Ga0193727_1123696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300019887\|Ga0193729_1062656	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300021344\|Ga0193719_10002247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7724	Open in IMG/M
3300021418\|Ga0193695_1079982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300021418\|Ga0193695_1119407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300022534\|Ga0224452_1157199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300025898\|Ga0207692_10548256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300025916\|Ga0207663_10719774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300025929\|Ga0207664_10918363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300025931\|Ga0207644_10328207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1238	Open in IMG/M
3300025936\|Ga0207670_11368175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300026035\|Ga0207703_12327469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300026295\|Ga0209234_1120492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	968	Open in IMG/M
3300026308\|Ga0209265_1219213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300026312\|Ga0209153_1160119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	830	Open in IMG/M
3300026314\|Ga0209268_1089634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	873	Open in IMG/M
3300026316\|Ga0209155_1091239	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300026318\|Ga0209471_1209889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731	Open in IMG/M
3300026329\|Ga0209375_1184136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300026530\|Ga0209807_1225446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300026540\|Ga0209376_1287113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300026542\|Ga0209805_1028719	All Organisms → cellular organisms → Bacteria	2862	Open in IMG/M
3300026542\|Ga0209805_1031963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2695	Open in IMG/M
3300026542\|Ga0209805_1358396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	556	Open in IMG/M
3300026547\|Ga0209156_10012728	All Organisms → cellular organisms → Bacteria	5377	Open in IMG/M
3300026548\|Ga0209161_10086186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1930	Open in IMG/M
3300026550\|Ga0209474_10114323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1798	Open in IMG/M
3300027875\|Ga0209283_10505699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300028824\|Ga0307310_10151102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1072	Open in IMG/M
3300028875\|Ga0307289_10313769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300031231\|Ga0170824_118239845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300031854\|Ga0310904_11377717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.73%
Host-Associated	Host-Associated	13.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.84%
Plants	Host-Associated → Plants	13.27%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.31%
Sediment	Environmental → Aquatic → Sediment	0.89%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.11%
Loam	Environmental → Terrestrial → Soil → Loam	8.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066674_102281271	3300005166	Soil	KELTIGGFTIPNAEVAVANMSSEILHLKAAAESNAGLLGAEHLAFNFAIIDVGGMALYLRHPDSR*
Ga0066683_104962021	3300005172	Soil	VNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066679_102436052	3300005176	Soil	TGDIKELTIGDFTIPRATVGVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDAR*
Ga0066679_109888691	3300005176	Soil	LTVGDFTIPNATVVAVNVSGDVLHSKTAAESNAGLIGAEYLAFNFAVIDVGGMALYLRHPESR*
Ga0066685_104486911	3300005180	Soil	LGSGDIKEMTIGDFTVLKASVSVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066678_107043801	3300005181	Soil	ELKIGDFTIPKATVGVVNVSGDVLHSKTAEESNSGLIGAEYLAWNFAVIDVGGLALYLRHPDSR*
Ga0066676_102640032	3300005186	Soil	VNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLHHPDSR*
Ga0066675_107457752	3300005187	Soil	IKEMTIGDFTIPKASVSVVNVSGEMLHSKSAAESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0065704_103322811	3300005289	Switchgrass Rhizosphere	EMTIGDFTIPKASVSAVNVSGEILHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0065712_106409371	3300005290	Miscanthus Rhizosphere	MLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0068869_1008020502	3300005334	Miscanthus Rhizosphere	SGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0070680_1014292551	3300005336	Corn Rhizosphere	SVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0068868_1003252331	3300005338	Miscanthus Rhizosphere	VNLSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0070689_1019505351	3300005340	Switchgrass Rhizosphere	LSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0070675_1000496441	3300005354	Miscanthus Rhizosphere	GDIKEMTIGDFTILKASVSVVNLSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0070674_1005365831	3300005356	Miscanthus Rhizosphere	DFTILKASVSVVNLSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0070673_1005208323	3300005364	Switchgrass Rhizosphere	IGDFTILKASVSVVNLSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0070708_1020113621	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TIGDFTIPKATAIVVNVSGDVLHSKTAAESNAGLVGAEYLAFNFAVIDVGGMSLYLRHAESR*
Ga0066682_104076801	3300005450	Soil	ATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066681_104664752	3300005451	Soil	LSLSPEVVQAKSGNESNAGFFGAEYLAFNFGVIDVGGLALYLRRPD*
Ga0066687_100557264	3300005454	Soil	DIKDLTIGDFTIPRATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMTLYLRHPDSR*
Ga0070662_1005766721	3300005457	Corn Rhizosphere	SGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0070699_1001457421	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	IPNATVVAVNVSGDVLHSKTAAESNAGLIGAEYLAFNFAVIDVGGTALYLRHPESR*
Ga0066661_101159942	3300005554	Soil	DIKEMTIGDFTIPNANVSVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066661_101749263	3300005554	Soil	LHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066692_103245281	3300005555	Soil	IKEMTIGDFTIPKASISVVNVSGAMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0066692_104808213	3300005555	Soil	TISNAETTVANISGEVLHSKNAPESNAGLLGAEYLAFDFATIDVGGMTLYLRHPDSR*
Ga0066699_100152081	3300005561	Soil	IKELTIGSFTIPRASVGVVNVSGDVLHSKNEGESNSGLLGAEYLAWNFAVIDVGGMALYLHHPDSR*
Ga0066699_102307841	3300005561	Soil	VSVVNVSGEMLHSKSAEESESGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066699_106574691	3300005561	Soil	NVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066694_100172751	3300005574	Soil	IGDFTILRATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066702_101305022	3300005575	Soil	VSVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066708_101443473	3300005576	Soil	VVNVSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRDPDSR*
Ga0068866_100610101	3300005718	Miscanthus Rhizosphere	ASVSVVNLSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0066651_103963301	3300006031	Soil	IGDFTIPRATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0070716_1000536051	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066665_105862602	3300006796	Soil	VSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066660_102615021	3300006800	Soil	VVNVSGEMLHSKSAEESESGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0066660_116597821	3300006800	Soil	IKDLTIGDFTIPRATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0105242_100493561	3300009176	Miscanthus Rhizosphere	VSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0105249_135346712	3300009553	Switchgrass Rhizosphere	MTIGDFTIPKASISVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0134109_104329982	3300010320	Grasslands Soil	EMTIGDFTILKASVSVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0134067_101294872	3300010321	Grasslands Soil	EESNSGLIGAEYLAWNFAVIDVGGMALYLRRPDSR*
Ga0134080_104293861	3300010333	Grasslands Soil	NVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0134066_103551452	3300010364	Grasslands Soil	VVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137382_100725394	3300012200	Vadose Zone Soil	LHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137363_117843682	3300012202	Vadose Zone Soil	DVLHSKTAAESNAGLIGAEYLAFNFAVIDVGGMALYLRHPESR*
Ga0137399_108753863	3300012203	Vadose Zone Soil	EMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137362_117376881	3300012205	Vadose Zone Soil	VLHSKNAPESNAGLLGAEYLAFNFAIIDVGGMTLYLRHPDSP*
Ga0137376_105862002	3300012208	Vadose Zone Soil	MSSEILHLKAAAESNAGLLGAEHLAFNFAIIDVGGMALYLRHPDSR*
Ga0137376_111466132	3300012208	Vadose Zone Soil	SRANVSVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137378_102151204	3300012210	Vadose Zone Soil	HSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137385_106276392	3300012359	Vadose Zone Soil	LTIGDFTIPRAIVGVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMVLYLRHPDSR*
Ga0137360_114127512	3300012361	Vadose Zone Soil	EPLGTGEIKELTVGDFTIPNATVVAVNVSGDVLHSKTAAESNAGLIGAEYLAFNFAVIDVGGMALYLRHPESR*
Ga0137358_102045591	3300012582	Vadose Zone Soil	ESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0157306_102977491	3300012912	Soil	IPKANVSVVNVSGEMLHSKSAEESNSGLIGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0137395_108349182	3300012917	Vadose Zone Soil	EMTIGDFTIPKASVGVVNVSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137394_112277181	3300012922	Vadose Zone Soil	DFTIPKASVGVVNVSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137359_101343131	3300012923	Vadose Zone Soil	SAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137413_102578932	3300012924	Vadose Zone Soil	TIGDFTIPKASVSVVNVSGEMLHSKSAEEWNSGLIGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0137413_106129921	3300012924	Vadose Zone Soil	PKASVSVVNVSGEMLHSKNAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137404_101464831	3300012929	Vadose Zone Soil	KQLTIGDFTIPKASVGVVNVSGEMLHSKSEAESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0137404_116258612	3300012929	Vadose Zone Soil	SVVNVSGEMLHSKSAAESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0137407_101090431	3300012930	Vadose Zone Soil	SKSAAESNSGLFGAEYLAWSFAVIDVGGMALYLRHADSR*
Ga0162651_1000859241	3300012938	Soil	GTGDIKEMTIGHFTIPKANVSVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0164305_120952042	3300012989	Soil	LHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0157374_113023721	3300013296	Miscanthus Rhizosphere	SGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHADSR*
Ga0157372_111370131	3300013307	Corn Rhizosphere	LSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0134081_100246721	3300014150	Grasslands Soil	DIKEMTIGDFTIPKASVSVVNVSGEMLHSKSAAESNSGLFGAEYLAWSFAVNDVGGMALYLRHPDSR*
Ga0134078_101406483	3300014157	Grasslands Soil	SKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRRPDSR*
Ga0134078_102232631	3300014157	Grasslands Soil	DLTIGDFTIPRATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR*
Ga0134073_102800912	3300015356	Grasslands Soil	EMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRRPDSR*
Ga0134072_102641232	3300015357	Grasslands Soil	VNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMTLYLRHPDSR*
Ga0134072_103321251	3300015357	Grasslands Soil	KSAAESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR*
Ga0134072_104336481	3300015357	Grasslands Soil	IPRASVGVVNVSGDVLHSKNEGESNSGLLGAEYLAWNFAVIDVGGMALYLHHPDSR*
Ga0066655_109329181	3300018431	Grasslands Soil	HSKSAEESNSGLIGAEYLSWNFAVIDVGGMALYLRHPDSR
Ga0066655_114289991	3300018431	Grasslands Soil	TIGDFTILKASVSVVNVSGEMLHSKNAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0066669_106423802	3300018482	Grasslands Soil	VNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0137408_12627873	3300019789	Vadose Zone Soil	KASVSVVNVSGEMLHSKSAAESNSGLFGAEYLAWSFAVIDVGGMALYLRHADSR
Ga0193720_10447071	3300019868	Soil	SVFNVSGEMLHSKSAEESNSGLFGAEYLAGSFAVIDVGGMALYLRHPDSR
Ga0193701_10988612	3300019875	Soil	SNVSVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0193727_11236961	3300019886	Soil	LGTGDIKVMTIGDFTIPKASVSVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0193729_10626563	3300019887	Soil	KSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0193719_100022471	3300021344	Soil	MGDIKEMTIGDFTIPKASVGVVNVSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0193695_10799821	3300021418	Soil	IGDFTIPKASVGVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDS
Ga0193695_11194072	3300021418	Soil	LHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0224452_11571991	3300022534	Groundwater Sediment	FTIPKANVSVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0207692_105482562	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LALKASVSVVNVSSEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0207663_107197742	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0207664_109183631	3300025929	Agricultural Soil	EMTIGNFTIPKVSVSVVNLSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHADSR
Ga0207644_103282072	3300025931	Switchgrass Rhizosphere	IPKASVSVVNLSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0207670_113681752	3300025936	Switchgrass Rhizosphere	KSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0207703_123274692	3300026035	Switchgrass Rhizosphere	SVSVVNLSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0209234_11204921	3300026295	Grasslands Soil	IKEMTIGDFTIPKASVSVVNVSGEMLHSKSAAESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0209265_12192132	3300026308	Soil	ANVSVVNVSGEMLHSKSAEESNSGLIGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0209153_11601192	3300026312	Soil	KQLAIGDFTIPNAPIVAMNVSSEVLRTKTAAETNAGLFGAEYLAFNFAVIDVSGLALYLRHAESR
Ga0209268_10896341	3300026314	Soil	FTIPRATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0209155_10912391	3300026316	Soil	VSGEMLHSKSAEESNSGLIGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0209471_12098891	3300026318	Soil	FTIPNANVSVVNVSGEMLHSKSAEESESGLIGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0209375_11841362	3300026329	Soil	DFTIPKASVSVVNVSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0209807_12254462	3300026530	Soil	VGTGDIKEMTIGDFTIPKASVGVVNVSGEMLHSKSAEESNSGLFGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0209376_12871131	3300026540	Soil	YTIPRATVSVVNVSGTMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDTR
Ga0209805_10287191	3300026542	Soil	TGDIKELTIGSFTIPRASVGVVNVSGDVLHSKNEGESNSGLLGAEYLAWNFAVIDVGGMALYLHHPDSR
Ga0209805_10319631	3300026542	Soil	AEESNAGLIGAEYLAWNFAVIDVGGMTLYLRHPDSR
Ga0209805_13583961	3300026542	Soil	AKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRHPDSR
Ga0209156_100127284	3300026547	Soil	VSGEMLHSKSAEESNSGLIGAEYLAWNFAVIDVGGMALYLRRPDSR
Ga0209161_100861864	3300026548	Soil	VKELAIGGFTISNAETTVANISGEVLHSKNAPESNAGLLGAEYLAFDFATIDVGGMTLYL
Ga0209474_101143231	3300026550	Soil	IGDFTIPRATVGVVNVSGEMLHSKSAEESNAGLIGAEYLAWNFAVIDVGGMALYLRHPDS
Ga0209283_105056991	3300027875	Vadose Zone Soil	NVKELAIGGFTISNAETTVANISGEVLHSKNAPESNAGLLGAEYLAFNFAIIDVGGMTLYLRHPDSR
Ga0307310_101511021	3300028824	Soil	PKASISVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0307289_103137692	3300028875	Soil	IPKANISVFNVSGEMLHSKSAEESNSGLFGAEYLAGSFAVIDVGGMALYLRHPDSR
Ga0170824_1182398452	3300031231	Forest Soil	VVNVSGEMLHSKSAEESNSGLIGAEYLAWSFAVIDVGGMALYLRHPDSR
Ga0310904_113777171	3300031854	Soil	IPKASVSVVNVSGEMLHSKSAEESNSGLFGAEYLAWSFAVIDVGGMALYLRHPDSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083174

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences