Metagenome / Metatranscriptome Family F083139

Basic Information
Family ID	F083139
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	46 residues
Representative Sequence	MRHKGFILAVLTAGLCIAAWAGDIEGKVTGMKGQSVVYVDAIAGKTF
Number of Associated Samples	93
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.18 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (69.912 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (11.504 % of family members)
Environment Ontology (ENVO)	Unclassified (29.204 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.982 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.33% β-sheet: 0.00% Coil/Unstructured: 58.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00034	Cytochrom_C	1.77
PF12833	HTH_18	1.77
PF01120	Alpha_L_fucos	0.88
PF00004	AAA	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3669	Alpha-L-fucosidase	Carbohydrate transport and metabolism [G]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
All Organisms	root	All Organisms	30.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
cellular organisms	root	All Organisms → cellular organisms	29.20 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.88 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104249173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300000789\|JGI1027J11758_12599511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1004026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2919	Open in IMG/M
3300004152\|Ga0062386_101494299	Not Available	563	Open in IMG/M
3300004603\|Ga0068918_1242347	Not Available	651	Open in IMG/M
3300004618\|Ga0068963_1053659	Not Available	866	Open in IMG/M
3300004633\|Ga0066395_11023328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005186\|Ga0066676_10734671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300005435\|Ga0070714_100892338	Not Available	863	Open in IMG/M
3300005435\|Ga0070714_101003785	Not Available	812	Open in IMG/M
3300005436\|Ga0070713_100276940	Not Available	1538	Open in IMG/M
3300005436\|Ga0070713_101356096	Not Available	689	Open in IMG/M
3300005436\|Ga0070713_101672655	Not Available	618	Open in IMG/M
3300005526\|Ga0073909_10007993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3160	Open in IMG/M
3300005602\|Ga0070762_10306936	Not Available	1001	Open in IMG/M
3300005610\|Ga0070763_10231340	Not Available	995	Open in IMG/M
3300005764\|Ga0066903_101963150	All Organisms → Viruses → Predicted Viral	1123	Open in IMG/M
3300005993\|Ga0080027_10137085	Not Available	934	Open in IMG/M
3300006028\|Ga0070717_10044465	All Organisms → cellular organisms → Bacteria	3626	Open in IMG/M
3300006032\|Ga0066696_10222030	Not Available	1213	Open in IMG/M
3300006046\|Ga0066652_101548674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300006050\|Ga0075028_100829056	Not Available	565	Open in IMG/M
3300006086\|Ga0075019_10153670	Not Available	1346	Open in IMG/M
3300006173\|Ga0070716_100803142	Not Available	729	Open in IMG/M
3300006174\|Ga0075014_100166396	Not Available	1089	Open in IMG/M
3300006174\|Ga0075014_100265053	Not Available	892	Open in IMG/M
3300006174\|Ga0075014_100813435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300006237\|Ga0097621_101235454	Not Available	704	Open in IMG/M
3300006804\|Ga0079221_11420619	Not Available	553	Open in IMG/M
3300006806\|Ga0079220_11174575	Not Available	630	Open in IMG/M
3300009521\|Ga0116222_1488656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009552\|Ga0116138_1055422	Not Available	1129	Open in IMG/M
3300009637\|Ga0116118_1082569	Not Available	1097	Open in IMG/M
3300009698\|Ga0116216_10122630	Not Available	1599	Open in IMG/M
3300009698\|Ga0116216_10736966	Not Available	592	Open in IMG/M
3300009698\|Ga0116216_10780435	Not Available	573	Open in IMG/M
3300010358\|Ga0126370_12441491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300011014\|Ga0138596_110470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300011078\|Ga0138565_1172048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012208\|Ga0137376_10145194	Not Available	2038	Open in IMG/M
3300012210\|Ga0137378_10567320	Not Available	1044	Open in IMG/M
3300013100\|Ga0157373_10592206	Not Available	807	Open in IMG/M
3300014160\|Ga0181517_10056405	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300014165\|Ga0181523_10249050	Not Available	1015	Open in IMG/M
3300016270\|Ga0182036_11604333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300016270\|Ga0182036_11912176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300016387\|Ga0182040_11147721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300016422\|Ga0182039_10999976	Not Available	750	Open in IMG/M
3300017822\|Ga0187802_10135831	Not Available	936	Open in IMG/M
3300017822\|Ga0187802_10282632	Not Available	645	Open in IMG/M
3300017823\|Ga0187818_10331455	Not Available	670	Open in IMG/M
3300017930\|Ga0187825_10294353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300017933\|Ga0187801_10337001	Not Available	619	Open in IMG/M
3300017934\|Ga0187803_10302981	Not Available	638	Open in IMG/M
3300017935\|Ga0187848_10415511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300017961\|Ga0187778_10210373	Not Available	1241	Open in IMG/M
3300017972\|Ga0187781_10499776	Not Available	873	Open in IMG/M
3300017995\|Ga0187816_10204271	Not Available	859	Open in IMG/M
3300017995\|Ga0187816_10311750	Not Available	691	Open in IMG/M
3300017995\|Ga0187816_10473055	Not Available	562	Open in IMG/M
3300018008\|Ga0187888_1349722	Not Available	562	Open in IMG/M
3300018013\|Ga0187873_1226828	Not Available	694	Open in IMG/M
3300018013\|Ga0187873_1389551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300018040\|Ga0187862_10879484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300018058\|Ga0187766_10218010	Not Available	1210	Open in IMG/M
3300018062\|Ga0187784_10621898	Not Available	867	Open in IMG/M
3300018085\|Ga0187772_10132067	Not Available	1638	Open in IMG/M
3300018085\|Ga0187772_10682117	Not Available	736	Open in IMG/M
3300018086\|Ga0187769_10551990	Not Available	870	Open in IMG/M
3300018090\|Ga0187770_11497097	Not Available	549	Open in IMG/M
3300019256\|Ga0181508_1608421	Not Available	806	Open in IMG/M
3300019786\|Ga0182025_1252245	Not Available	2624	Open in IMG/M
3300020579\|Ga0210407_11214604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300020583\|Ga0210401_10083621	All Organisms → cellular organisms → Bacteria	3002	Open in IMG/M
3300021088\|Ga0210404_10088816	Not Available	1538	Open in IMG/M
3300021168\|Ga0210406_10114821	Not Available	2279	Open in IMG/M
3300021171\|Ga0210405_10676785	Not Available	799	Open in IMG/M
3300021403\|Ga0210397_10327995	Not Available	1130	Open in IMG/M
3300021420\|Ga0210394_10167230	Not Available	1913	Open in IMG/M
3300021420\|Ga0210394_11795243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300021441\|Ga0213871_10289679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300021479\|Ga0210410_11697418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300021560\|Ga0126371_10686549	Not Available	1172	Open in IMG/M
3300025404\|Ga0208936_1028887	Not Available	731	Open in IMG/M
3300025912\|Ga0207707_10299798	Not Available	1390	Open in IMG/M
3300025929\|Ga0207664_11685550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300027696\|Ga0208696_1088497	Not Available	1037	Open in IMG/M
3300027842\|Ga0209580_10281325	Not Available	828	Open in IMG/M
3300027854\|Ga0209517_10212666	Not Available	1184	Open in IMG/M
3300027854\|Ga0209517_10607483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300027884\|Ga0209275_10622242	Not Available	620	Open in IMG/M
3300027884\|Ga0209275_10689958	Not Available	588	Open in IMG/M
3300027908\|Ga0209006_10395880	Not Available	1164	Open in IMG/M
3300027911\|Ga0209698_10055244	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	3458	Open in IMG/M
3300030706\|Ga0310039_10312976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300031573\|Ga0310915_10479422	Not Available	884	Open in IMG/M
3300031708\|Ga0310686_108033541	Not Available	2655	Open in IMG/M
3300031708\|Ga0310686_113564933	All Organisms → cellular organisms → Bacteria	4081	Open in IMG/M
3300031754\|Ga0307475_10635568	Not Available	853	Open in IMG/M
3300031754\|Ga0307475_11240112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300031947\|Ga0310909_10289650	Not Available	1371	Open in IMG/M
3300031954\|Ga0306926_11277766	Not Available	858	Open in IMG/M
3300031996\|Ga0308176_10157507	Not Available	2087	Open in IMG/M
3300031996\|Ga0308176_11710947	Not Available	671	Open in IMG/M
3300032261\|Ga0306920_100157627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	3384	Open in IMG/M
3300032261\|Ga0306920_103344271	Not Available	597	Open in IMG/M
3300032805\|Ga0335078_12584032	Not Available	521	Open in IMG/M
3300032828\|Ga0335080_10346503	Not Available	1603	Open in IMG/M
3300032829\|Ga0335070_10214316	Not Available	1909	Open in IMG/M
3300033405\|Ga0326727_10218171	Not Available	2043	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.57%
Aquatic	Environmental → Aquatic	24.78%
Plants	Host-Associated → Plants	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.68%
Freshwater	Environmental → Aquatic → Freshwater	19.47%
Sediment	Environmental → Aquatic → Sediment	5.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%
Peat	Environmental → Terrestrial → Peat	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.58%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004603	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004618	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300011014	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 43 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1042491732	3300000364	Soil	MQKENSAMKCKELVLIVVVIGLGVAAWAGDIEGKVTGMKGKS
JGI1027J11758_125995111	3300000789	Soil	MKLRACVLMTVLAAVSTAAWAGDIEGKVSGMKGKSVVYVDAIA
AP72_2010_repI_A001DRAFT_10040264	3300000893	Forest Soil	MKFKACALMTVVAALCVAATAGXIEGKVSGMKGKSIVYVDTIA
Ga0062386_1014942991	3300004152	Bog Forest Soil	MKGKAFVFVLLTAALCSAAWAGDIEGKVTGMKGHSVVYVDVIAGKT
Ga0068918_12423471	3300004603	Peatlands Soil	MNSKFVMKAFAVVALIGGLGVASWAGDIEGKVSGMKGQSVVYVDAIAGKTFPAPKEH
Ga0068963_10536592	3300004618	Peatlands Soil	MKRKGFILAVLMVGLGSVAWAGDIEGKVSGMKGQSVVYVDAIAGKTFPAPKDHTV
Ga0066395_110233282	3300004633	Tropical Forest Soil	MRYKELVSMLMVLGFGLAARASDIEGKVTGMKGKSVVYVDVIAGKAFPAPKEHPVIDQ
Ga0066676_107346711	3300005186	Soil	MRGKGFVLMLVVSGLCVTAWAGDIEGKVSGMKGKSVVYLDYISGKTFSVPKDHPVMDQRGLM
Ga0070714_1008923381	3300005435	Agricultural Soil	MKFKACALMTVVAALSVAATAGDIEGRVSGMKGKSVVYVDTIAGKTFPASKD
Ga0070714_1010037851	3300005435	Agricultural Soil	MKYKGFVVTLLVAGSSMAAWAGDIEGKVTGMKGKSVVYVATIAGKTFLAPKDH
Ga0070713_1002769401	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKYKGFVVTLLVAGSSMAAWAGDIEGKVTGMKGKSVVYVATIAG
Ga0070713_1013560961	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKLKGFAVMLVVVGLSMAAWAGDIEGKVTGMKGHSVVYVDVIA
Ga0070713_1016726552	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKRNAWVLMVLIAALSTVSWAGDIEGKVTGMKGKSVVYVDTIAGK
Ga0073909_100079931	3300005526	Surface Soil	MKFKACALMTVVAALSVAATAGDIEGRVSGMKGKSVVYVDTIAGKTFPASKDH
Ga0070762_103069361	3300005602	Soil	MRRNTFLVVMLALGLCSAALAGDIEGKVAGMKGKSVVYVDAIAGKTF
Ga0070763_102313401	3300005610	Soil	MKSKRFILAVLMVGLCSAAWAGDIEGKVSGMKGQSVVYVDAI
Ga0066903_1019631501	3300005764	Tropical Forest Soil	MRLRAVAVMTVVAGVSMSAWAGDIEGKVAGMKGKSVVYVD
Ga0080027_101370851	3300005993	Prmafrost Soil	MKYKACVGIMVAASLSTAAWAGDIEGKVTGMNGHSVVYVDT
Ga0070717_100444653	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKYKALVGMMVVAGLSMAAWAGDIEGKVTGMKGKSVVYVDTIPGKTFPAP
Ga0066696_102220302	3300006032	Soil	MTFKNCILMLIVSGISMAAWAADIEGKVGGMKGKSVVYVDAIAGKTFPAPKD
Ga0066652_1015486742	3300006046	Soil	MKYTELVATLVLAGLSMAAWAGDIEGKVSGMKGKSVVYVDTIPGKT
Ga0075028_1008290562	3300006050	Watersheds	MRRNTFLVVMLALGLCSAALAGDIEGKVTGMKGKSVVYVDA
Ga0075019_101536702	3300006086	Watersheds	MKTKLLVLVVLIGGLAVSAWAGDIEGKVTGMKGKSVVYVD
Ga0070716_1008031421	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKVRACALLLLVAALNLAAWAGDIEGKVAGMKGKSVVYVDAIAG
Ga0075014_1001663962	3300006174	Watersheds	MKGTKAVVLAVMLSLCSAAWAGDIEGKVTGMKGHSVVYVDAI
Ga0075014_1002650531	3300006174	Watersheds	MRRNAFLVVMLALGLCSAALAGDIDGRVTGMKGKSVVYVDAIAGKSFPAP
Ga0075014_1008134351	3300006174	Watersheds	MKLRACVLMTVVAALSMAAWAGDIEGKVTGMKGKSV
Ga0097621_1012354542	3300006237	Miscanthus Rhizosphere	MKFKACALMTVVAALSVAATAGDIEGRVSGMKGKSVVYVDTIAGKTFPASKDHPVIDQ
Ga0079221_114206192	3300006804	Agricultural Soil	MKRNACVLMAVIAALAVASWAGDIEGKVTGMKGKSVVYVDTIAG
Ga0079220_111745752	3300006806	Agricultural Soil	MKRNAWVLMVLIAALSTVSWAGDIEGKVTGMKGKSVVYVDTIAGKTFPAP
Ga0116222_14886562	3300009521	Peatlands Soil	MRRKGFILAIVIAGLCSAAWAGDIDGKVTGMKGQSVVYVD
Ga0116138_10554222	3300009552	Peatland	MRYKTCALTVLIAGLCTAVWAGDIDGKVTGMKGQSVVYVDAIAGKTF
Ga0116118_10825692	3300009637	Peatland	MNCKVFVLVVLAAGLCSAAWAGDIEGKITGMKGHSVVYVEAIAGKTFP
Ga0116216_101226302	3300009698	Peatlands Soil	MRRKGFILTILIAGLCSAAWAGDIDGKVTGMKGQSV
Ga0116216_107369662	3300009698	Peatlands Soil	MKRKVLLVVLTAGLCSAAWAGDIEGKVTGMKGHSVVYVDVIAG
Ga0116216_107804352	3300009698	Peatlands Soil	LFTTISKEKKTMNSKFVMKAFAVVALIGGLGVASWAGDIEGKVSGMKGQSVVYVDAIAGKTFPAPKEH
Ga0126370_124414911	3300010358	Tropical Forest Soil	MKYNIWVLMLVLAGLCVAASAGDIEGKVTGMKGKSVVYVDAI
Ga0138596_1104702	3300011014	Peatlands Soil	MKRKGFILAVLMVGLGSVAWAGDIEGKVSGMKGQSVVYVDAIAGKTFPAPKD
Ga0138565_11720481	3300011078	Peatlands Soil	MKRKGFILAVLMVGLGSVAWAGDIEGKVSGMKGQSVVYVDAIAGKT
Ga0138579_11747623	3300011090	Peatlands Soil	MNSKFALKTFAVVALIGGLGVASWAGDIEGKVTGMKGKSVVYVEAIAGKTF
Ga0137376_101451942	3300012208	Vadose Zone Soil	MKVRLFVLAVLIAGLAVGAWAGDIEGKVTGMKGKSVVYVDTIAGKTFPT
Ga0137378_105673202	3300012210	Vadose Zone Soil	MLVVTGMWMAAWAGDIEGKVSGMKSHSVVYVEATAGKTFPAPKEHP
Ga0157373_105922061	3300013100	Corn Rhizosphere	MKYKALVGMMVVAGLSMAAWAGDIEGKVSGMKGKS
Ga0181517_100564053	3300014160	Bog	MRYKTCALTVLIAGLCTAVWAGDIDGKVTGMKGQSVVYVD
Ga0181523_102490502	3300014165	Bog	MRRKGFILAVLIAGLCMAAWAGGIEGKVTGMKGHSVVYVDAIA
Ga0182036_116043331	3300016270	Soil	MKLRNCILVALVTGFFTAAWAGDIEGKISGMNGKSVVYVD
Ga0182036_119121762	3300016270	Soil	MKLRACVLMTVVAALSAAAWAGDIEGKVSGMKGKSVVYVDAIAG
Ga0182040_111477212	3300016387	Soil	MKLRNCILVALVTGFFTAAWAGDIEGKISGMNGKSVVY
Ga0182039_109999762	3300016422	Soil	MKCKGLVSIVIVFSLGVAAWAGDIEGKVTGMKGKSVVYVDTIAGK
Ga0187802_101358311	3300017822	Freshwater Sediment	MKCKIFVMMALIAGLCSAAFAGDIEGKVTGMKGHSVVYVDAIAGNTFPAPKD
Ga0187802_102826321	3300017822	Freshwater Sediment	MKCKGFILAVLILMVGLCSAAWAGDIEGKVTGMKGQPTLR
Ga0187818_103314551	3300017823	Freshwater Sediment	MNGTKAMVVAVIAVALCSAAWAGDIEGKVTGMKGHSVVYVDTIAGKTFP
Ga0187825_102943531	3300017930	Freshwater Sediment	MRYKAFVLLVLTAGLCAGARAGDIEGKVSGMKGHSVVYIDAIAGKTFPAPKEHAV
Ga0187801_103370011	3300017933	Freshwater Sediment	MRRKGLLAVMIAALCSAAWAGDIEGKVSGMKGQSVVYV
Ga0187803_103029811	3300017934	Freshwater Sediment	MKGTKAVVLAVIAIALCSAAWAGDIEGKVTGMKGHSVVYVAAI
Ga0187848_104155112	3300017935	Peatland	MRRKGFILAVLIAGLCMAAWAGGIEGKVTGMKGHSVVYVDAI
Ga0187778_102103732	3300017961	Tropical Peatland	MRHEAFLLTLLTVGLCVGAWAGEIEGKVSGMKGPSVVYVDVIAGKTFSAPKEH
Ga0187781_104997762	3300017972	Tropical Peatland	MAYRTFAMLLLMAGLHTAAWAGDIDGKVTGMKGQSVVYVEAIAGKTFP
Ga0187816_102042712	3300017995	Freshwater Sediment	MKCKGFILAVLMVGLCSAAWAGDIEGKVTGMKGQSVVYVDAIAGKTFPAPKE
Ga0187816_103117502	3300017995	Freshwater Sediment	MKTKPFLLVVVTAGFCMAAWAGDIEGKVSGMNGHSIVYVNAIAGKTFPAPKEHPVMDQKG
Ga0187816_104730552	3300017995	Freshwater Sediment	MKCKIFVMMALIAGLCSAAFAGDIEGKVTGMKGHSVVYVDAI
Ga0187888_13497222	3300018008	Peatland	MRHKGFILAVLTAGLCIAAWAGDIEGKVTGMKGQSVVYVDAIAGKTF
Ga0187873_12268282	3300018013	Peatland	MRCKAFVLVVLTAGFCFTAWAGDIDGKVTGMKGHSVVYVDAIANKTFPAP
Ga0187873_13895512	3300018013	Peatland	MRRNGLILAVLIAGLCSAVWAGDIEGKVTGMKGHSVVYVDAIAGKTFPAPK
Ga0187862_108794842	3300018040	Peatland	MRHKGFILAVMTAGLCIAAWAGDIEGKVTGMKGQSVVY
Ga0187766_102180101	3300018058	Tropical Peatland	MRFNAFILMVAIAGLCMSAWAGDIEGKVSGMKGKSVVYVDTIQGKTFPAPKDH
Ga0187784_106218981	3300018062	Tropical Peatland	MRRKAWALAVTTAVLCSAAWAGDIEGKVTGMKGHSVVYVDTIA
Ga0187772_101320672	3300018085	Tropical Peatland	MNSKFATKTFVIVALIAGLSMTSWAGDIEGKVTGMKGKSVVYVEAIAGKTF
Ga0187772_106821172	3300018085	Tropical Peatland	MKNKALLVAALITGLCGSAWAGDIEGKVSGMKGHSVVYID
Ga0187769_105519901	3300018086	Tropical Peatland	MRSKALVLVTLTAGLCVAAWAGDIEGKVAGMKGHSVVYVDAIAGKTFPAPKDH
Ga0187770_114970972	3300018090	Tropical Peatland	MRSKAFVLVVLTLGLCVAASAGDIEGKATGMKGHSVVYVDTIAGKTFPAPKDHPVM
Ga0181508_16084212	3300019256	Peatland	MKRKAFVLAVLVAAGLCSAAWAGDVEGKVTGMKGQSVVYIDAIAGK
Ga0182025_12522454	3300019786	Permafrost	VAVLLAGLCGAAWSGDIEGKVTGMKGHSWFTFDAVAGKTFPP
Ga0210407_112146042	3300020579	Soil	MKRKGFILAILVAGMCSAAWAGDIEGKVSGMKGPSVVYVDTI
Ga0210401_100836214	3300020583	Soil	MKHKGFILAVLMVGLCSAAWAGDIEGKVSGMKGQSVVYVDAIAGKTFPAPKE
Ga0210404_100888161	3300021088	Soil	MALRACVLLLLVSALDLTAWAGDIEGKVTGMKGKSVVYLDTIA
Ga0210406_101148213	3300021168	Soil	MRYKRYLLMLVVAGLCEAAWAGDIDGKVTGMNGHSVVYVDTI
Ga0210405_106767851	3300021171	Soil	MRRNTFLVVMLALGLCSAALAGDIEGKITGMKGKSVVYVDAIAGKTFPA
Ga0210397_103279951	3300021403	Soil	MKSKRFILAVLMVGLCSAAWAGDIEGKVSGMKGQSVVYV
Ga0210394_101672301	3300021420	Soil	MKCNAFVHVVLAAGLCSAAWAGDIEGKVTGMKGPSVVYVDTIAGKTFPA
Ga0210394_117952431	3300021420	Soil	MKSKGFILAVLAVLMVGLCSAAWAGDIEGKVSGMKGQSVVYVDA
Ga0213871_102896791	3300021441	Rhizosphere	MKCKGLILTVLMSGLLSAAWAGDIEGKVSGMKGKSVVYVDTIAGKTFPAPKDHPVM
Ga0210410_116974181	3300021479	Soil	MKSKRFILAVLMVGLCSAAWAGDIEGKVSGMKGQSVVYVDAIAGKTFPA
Ga0126371_106865492	3300021560	Tropical Forest Soil	MRLRAVAMMTAVAGMSMAAWAGDIEGKVAGMKGKSVVYVDTIAGKTFPAPADHP
Ga0213853_116206141	3300021861	Watersheds	MKTKLFVLVVLIAGLTVGAWSGDIEGNVTGMKGKSVVYVDTI
Ga0208936_10288872	3300025404	Peatland	MKLKTLILISIVVTAGLCTSAWAGDIEGKVTGMKGHSVVYVDT
Ga0207707_102997981	3300025912	Corn Rhizosphere	MKYKALVGMMVVAGLSMAAWAGDIEGKVTGMKGKSVVYVDTIP
Ga0207664_116855502	3300025929	Agricultural Soil	MKYKGCVLMVVVAGFCMAAWAGDIEGKVTGMKGKS
Ga0208696_10884971	3300027696	Peatlands Soil	MKRKGFILAVLMVGLGSVAWAGDIEGKVSGMKGQSVVYVDAIAGKTFPAPKDHT
Ga0209580_102813252	3300027842	Surface Soil	MKIKVLVFAVLIAGLTVGAWAGDIEGKVTGMKGKSVVYVDTIAGKTFPA
Ga0209517_102126661	3300027854	Peatlands Soil	MRRTGFIFAVLIAGLCSAAWAGDIDGKVTGMKGQSVVYVDAIAGK
Ga0209517_106074832	3300027854	Peatlands Soil	MRRKGFILTVLIAGVCIAAWAGDIEGKVTGMKGQSVVYIDAIPGKTFSP
Ga0209275_106222421	3300027884	Soil	MKRNTCVGIVLIAGLCTAAWAGDIEGKVTGMKGKSVVYVDTIA
Ga0209275_106899582	3300027884	Soil	MRRNTFLVVMLALGLCSAALAGDIEGKVAGMKGKSVVYVDAIAGKTFPAPKEHPV
Ga0209006_103958802	3300027908	Forest Soil	MKFKTCVLMVVVVGLCTVAVAGDIEGKVTGMKGHSVVYVDAIAG
Ga0209698_100552444	3300027911	Watersheds	MRRNAFLVVMLALGLCSAALAGDIDGKVTGMRGKSVVYVDAIAGKSFPAP
Ga0310039_103129762	3300030706	Peatlands Soil	MRRKGFILAIVIAGLCSAAWAGDIDGKVTGMKGQSVVYVDAIAGKTFPAPKE
Ga0310915_104794221	3300031573	Soil	MKCKGLVSIVIVFSLGVAAWAGDIEGKVTGMKGKSVVYVDTIAGKTFP
Ga0310686_1080335411	3300031708	Soil	MKGKGLILAVLTAGWCVTAWAGDIEGKVSGMKGQSVVY
Ga0310686_1135649336	3300031708	Soil	MKRKGFILAVLMVGLCSAAWAGDIEGKVSGMKGQSVV
Ga0307476_107084882	3300031715	Hardwood Forest Soil	MNSKFAMKTFAVVALIGGLGVASWAGDIEGKVTGMKGKSVVYVETIAGKTF
Ga0307475_106355682	3300031754	Hardwood Forest Soil	MKTKVFVLAVLITGLAVGAWAGDIEGKVAGMKGKSVVYVDTIAGKTFPAPKDHP
Ga0307475_112401121	3300031754	Hardwood Forest Soil	MKLRACILMTVVAGLSMAAWAGDIEGKVAGMKGKSVVYVDAIAG
Ga0310909_102896502	3300031947	Soil	MRSKLFAPVVLIAGLSINVWAGDIEGKVSGMKGQSVVYLDAIAGKTFP
Ga0306926_112777662	3300031954	Soil	MKRNACLLIVLIAGLFTAAWAGDIEGKVTGMKGKSVVYVDTIAGK
Ga0308176_101575071	3300031996	Soil	MKYKGLLATLVVAGLSMAAWAGDIEGKVTGMKGKSVVYVDTIPGKTFP
Ga0308176_117109471	3300031996	Soil	MKYKALMAALVVAGLSMAAWAGDIEGKVTGMKGKSVVYVD
Ga0306920_1001576271	3300032261	Soil	MRLRAVAVMTAVAGMSMAAWAGDIEGKVAGMKGKSVVYVD
Ga0306920_1033442711	3300032261	Soil	MKRNACLLIVLIAGLFTAAWAGDIEGKVTGMKGKSVVYVDAIAGKTF
Ga0335078_125840321	3300032805	Soil	MRGTAFALIVMAGALCSMALAGEIDGKVTGMKGKSVVYVDAIPG
Ga0335080_103465031	3300032828	Soil	MKAKIVALTMLIGLCRAAWAGDIEGKVSGMKGKGVVYIDVIAGKTF
Ga0335070_102143161	3300032829	Soil	MRFRVCILPAVTAALATAAWAGDIEGKVTGMKGRSVVYVDTIAGKTF
Ga0326727_102181713	3300033405	Peat Soil	MKYKAFVLVVLIAGLCIGAWAGDIEGKVTGMKGQSVVYVEAIAGKTFPA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083139

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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