Metagenome / Metatranscriptome Family F083070

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083070
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	57 residues
Representative Sequence	MYENDPDDRFEAALRLAEVDPARGAEALRSIVADDAFDPDTRSEAAHRLAEVDPA
Number of Associated Samples	95
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.21 %
% of genes near scaffold ends (potentially truncated)	77.88 %
% of genes from short scaffolds (< 2000 bps)	81.42 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.442 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.699 % of family members)
Environment Ontology (ENVO)	Unclassified (25.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.097 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.40% β-sheet: 0.00% Coil/Unstructured: 50.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.1.30: FAT domain	d4jspa3	4jsp	0.78799
a.118.7.1: 14-3-3 protein	d3efza1	3efz	0.76728
a.102.1.4: Glycosyltransferase family 36 C-terminal domain	d1v7va1	1v7v	0.75342
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ihga1	1ihg	0.75159
a.118.8.1: Tetratricopeptide repeat (TPR)	d1qqea_	1qqe	0.7493

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF14016	DUF4232	4.42
PF00589	Phage_integrase	3.54
PF01546	Peptidase_M20	2.65
PF13396	PLDc_N	1.77
PF12706	Lactamase_B_2	1.77
PF01850	PIN	1.77
PF13751	DDE_Tnp_1_6	0.88
PF00561	Abhydrolase_1	0.88
PF12681	Glyoxalase_2	0.88
PF07638	Sigma70_ECF	0.88
PF09424	YqeY	0.88
PF08241	Methyltransf_11	0.88
PF00291	PALP	0.88
PF13977	TetR_C_6	0.88
PF02577	BFN_dom	0.88
PF01370	Epimerase	0.88
PF11695	DUF3291	0.88
PF07687	M20_dimer	0.88
PF03030	H_PPase	0.88
PF03992	ABM	0.88
PF00392	GntR	0.88
PF04191	PEMT	0.88
PF13302	Acetyltransf_3	0.88
PF13646	HEAT_2	0.88
PF00440	TetR_N	0.88
PF05598	DUF772	0.88
PF13556	HTH_30	0.88
PF00583	Acetyltransf_1	0.88
PF06441	EHN	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.88
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.44 %
Unclassified	root	N/A	49.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.51 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.31 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.42 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.42 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.77 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.88 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.88 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.31 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.54 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.54 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.77 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.88 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.88 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.88 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.31 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.54 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.77 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.77 %
Haloechinothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Haloechinothrix	0.88 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.88 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.88 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.88 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.31 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.54 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	1.77 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.77 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.88 %
Haloechinothrix alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Haloechinothrix → Haloechinothrix alba	0.88 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.88 %
Jatrophihabitans telluris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	0.88 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.88 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.31 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.54 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	1.77 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.77 %
Nocardia sp. CS682	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. CS682	0.88 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.88 %
Haloechinothrix alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Haloechinothrix → Haloechinothrix alba	0.88 %
Jatrophihabitans telluris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	0.88 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.88 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Chloroflexi bacterium T81	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_113791411	Not Available	1060	Open in IMG/M
3300002914\|JGI25617J43924_10131469	Not Available	874	Open in IMG/M
3300003505\|JGIcombinedJ51221_10206486	Not Available	797	Open in IMG/M
3300004082\|Ga0062384_101182744	Not Available	555	Open in IMG/M
3300004092\|Ga0062389_101317349	Not Available	907	Open in IMG/M
3300004635\|Ga0062388_102389302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium T81	553	Open in IMG/M
3300005434\|Ga0070709_10072653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2224	Open in IMG/M
3300005435\|Ga0070714_100207121	Not Available	1796	Open in IMG/M
3300005437\|Ga0070710_10016768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3734	Open in IMG/M
3300005437\|Ga0070710_11260159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	548	Open in IMG/M
3300005445\|Ga0070708_100994373	Not Available	787	Open in IMG/M
3300005518\|Ga0070699_100004326	All Organisms → cellular organisms → Bacteria	12559	Open in IMG/M
3300005537\|Ga0070730_10123342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1776	Open in IMG/M
3300005576\|Ga0066708_10167817	Not Available	1360	Open in IMG/M
3300005602\|Ga0070762_10681595	Not Available	688	Open in IMG/M
3300005602\|Ga0070762_11282636	Not Available	508	Open in IMG/M
3300005610\|Ga0070763_10675039	Not Available	604	Open in IMG/M
3300005712\|Ga0070764_10115770	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300005921\|Ga0070766_10667611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	702	Open in IMG/M
3300006175\|Ga0070712_100119550	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300006176\|Ga0070765_101193765	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300006176\|Ga0070765_101270418	Not Available	695	Open in IMG/M
3300006854\|Ga0075425_100353957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1690	Open in IMG/M
3300006871\|Ga0075434_100279861	Not Available	1688	Open in IMG/M
3300006904\|Ga0075424_100655984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1120	Open in IMG/M
3300009090\|Ga0099827_10021870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4455	Open in IMG/M
3300009090\|Ga0099827_10230971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. CS682	1549	Open in IMG/M
3300009700\|Ga0116217_10961717	Not Available	523	Open in IMG/M
3300010048\|Ga0126373_10431852	Not Available	1348	Open in IMG/M
3300010048\|Ga0126373_11002998	Not Available	900	Open in IMG/M
3300010048\|Ga0126373_11995354	Not Available	643	Open in IMG/M
3300010339\|Ga0074046_10692654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300010361\|Ga0126378_11288215	Not Available	826	Open in IMG/M
3300010366\|Ga0126379_10905833	Not Available	984	Open in IMG/M
3300010373\|Ga0134128_10026424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6843	Open in IMG/M
3300010376\|Ga0126381_101546271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	959	Open in IMG/M
3300010379\|Ga0136449_101625988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300010868\|Ga0124844_1254882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300010937\|Ga0137776_1658655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2287	Open in IMG/M
3300011269\|Ga0137392_10031466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3854	Open in IMG/M
3300011270\|Ga0137391_10072499	Not Available	2961	Open in IMG/M
3300012096\|Ga0137389_11391433	Not Available	597	Open in IMG/M
3300012209\|Ga0137379_10708791	Not Available	912	Open in IMG/M
3300012211\|Ga0137377_10589582	Not Available	1049	Open in IMG/M
3300014201\|Ga0181537_10062846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2517	Open in IMG/M
3300014657\|Ga0181522_10529112	Not Available	712	Open in IMG/M
3300014969\|Ga0157376_11075759	Not Available	829	Open in IMG/M
3300015371\|Ga0132258_10534853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2935	Open in IMG/M
3300017926\|Ga0187807_1165176	Not Available	711	Open in IMG/M
3300017930\|Ga0187825_10168732	Not Available	779	Open in IMG/M
3300017932\|Ga0187814_10429709	Not Available	516	Open in IMG/M
3300017937\|Ga0187809_10016805	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2357	Open in IMG/M
3300017970\|Ga0187783_11059652	Not Available	584	Open in IMG/M
3300018001\|Ga0187815_10038752	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300018001\|Ga0187815_10238361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300018030\|Ga0187869_10467433	Not Available	599	Open in IMG/M
3300018033\|Ga0187867_10240766	Not Available	1021	Open in IMG/M
3300020582\|Ga0210395_10184444	Not Available	1563	Open in IMG/M
3300021178\|Ga0210408_10172265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1718	Open in IMG/M
3300021180\|Ga0210396_10253942	Not Available	1563	Open in IMG/M
3300021180\|Ga0210396_11415372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	574	Open in IMG/M
3300021180\|Ga0210396_11502218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300021403\|Ga0210397_10035008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	3155	Open in IMG/M
3300021403\|Ga0210397_10144599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1656	Open in IMG/M
3300021403\|Ga0210397_10474859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300021407\|Ga0210383_10039927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3913	Open in IMG/M
3300021407\|Ga0210383_10433919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1134	Open in IMG/M
3300021475\|Ga0210392_10174283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1486	Open in IMG/M
3300021478\|Ga0210402_10054429	All Organisms → cellular organisms → Bacteria	3504	Open in IMG/M
3300021560\|Ga0126371_12026313	Not Available	693	Open in IMG/M
3300021560\|Ga0126371_12716125	Not Available	600	Open in IMG/M
3300025898\|Ga0207692_10776461	Not Available	625	Open in IMG/M
3300025905\|Ga0207685_10020853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2186	Open in IMG/M
3300025922\|Ga0207646_10087261	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300027037\|Ga0209005_1051944	Not Available	507	Open in IMG/M
3300027096\|Ga0208099_1041424	Not Available	661	Open in IMG/M
3300027173\|Ga0208097_1015172	Not Available	854	Open in IMG/M
3300027817\|Ga0209112_10008339	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300027879\|Ga0209169_10057362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Haloechinothrix → Haloechinothrix alba	2019	Open in IMG/M
3300027882\|Ga0209590_10270678	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300027882\|Ga0209590_10339693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	967	Open in IMG/M
3300027968\|Ga0209061_1132476	Not Available	829	Open in IMG/M
3300028742\|Ga0302220_10145367	Not Available	906	Open in IMG/M
3300028808\|Ga0302228_10118708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1231	Open in IMG/M
3300028877\|Ga0302235_10383670	Not Available	602	Open in IMG/M
3300028906\|Ga0308309_10919369	Not Available	759	Open in IMG/M
3300029944\|Ga0311352_11157944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	589	Open in IMG/M
3300030503\|Ga0311370_10861984	Not Available	1032	Open in IMG/M
3300030503\|Ga0311370_11405956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	737	Open in IMG/M
3300030707\|Ga0310038_10500507	Not Available	514	Open in IMG/M
3300030730\|Ga0307482_1231863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300031708\|Ga0310686_101250869	Not Available	1023	Open in IMG/M
3300031708\|Ga0310686_109194516	Not Available	684	Open in IMG/M
3300031748\|Ga0318492_10769328	Not Available	517	Open in IMG/M
3300031754\|Ga0307475_10785790	Not Available	756	Open in IMG/M
3300031832\|Ga0318499_10220140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	739	Open in IMG/M
3300031890\|Ga0306925_10357188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1569	Open in IMG/M
3300031897\|Ga0318520_10883907	Not Available	562	Open in IMG/M
3300031912\|Ga0306921_10382091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1645	Open in IMG/M
3300032008\|Ga0318562_10705047	Not Available	580	Open in IMG/M
3300032009\|Ga0318563_10191231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1103	Open in IMG/M
3300032041\|Ga0318549_10436326	Not Available	590	Open in IMG/M
3300032052\|Ga0318506_10129945	Not Available	1094	Open in IMG/M
3300032055\|Ga0318575_10670222	Not Available	525	Open in IMG/M
3300032160\|Ga0311301_10042968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10783	Open in IMG/M
3300032160\|Ga0311301_12813090	Not Available	531	Open in IMG/M
3300032160\|Ga0311301_12901579	Not Available	519	Open in IMG/M
3300032783\|Ga0335079_10640217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300032805\|Ga0335078_10747003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1203	Open in IMG/M
3300032892\|Ga0335081_11005193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300032896\|Ga0335075_10931299	All Organisms → cellular organisms → Bacteria → Terrabacteria group	791	Open in IMG/M
3300032898\|Ga0335072_10655728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1039	Open in IMG/M
3300033158\|Ga0335077_10140712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2780	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Aquatic	Environmental → Aquatic	12.39%
Plants	Host-Associated → Plants	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.88%
Freshwater	Environmental → Aquatic → Freshwater	11.50%
Peat	Environmental → Terrestrial → Peat	5.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.67%
Loam	Environmental → Terrestrial → Soil → Loam	22.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.19%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027037	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1137914112	3300000956	Soil	MYENDPDDRFETALRLAEVDPARAAEALRSIVADDAFDPDTRSEAAHRLAEVDPA*
JGI25617J43924_101314694	3300002914	Grasslands Soil	MYENDPDDRFEAALRLAEVDPAQGAEAXRDIVADDAFDPDTRS
JGIcombinedJ51221_102064862	3300003505	Forest Soil	MYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADDAF
Ga0062384_1011827441	3300004082	Bog Forest Soil	MVEDEDDDRFEAAARLAEVDPAQGAEALRSIVADEAFDPDTRFE
Ga0062389_1013173492	3300004092	Bog Forest Soil	VASNEYAPDERFEAALRLSEVDPVRAAARLRSICASDEFDRDTRDEAAHRLSEL*
Ga0062388_1023893021	3300004635	Bog Forest Soil	AEALRSIVADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADEAFDPDIRSEAAARLAEVGG*
Ga0070709_100726534	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GAEALRSIVADDAFDPDDRAEAAHRLAEVDPARAAEALRSIVADDAFDPDTRAEAAHRLAEVDPA*
Ga0070714_1002071211	3300005435	Agricultural Soil	MYENDPDDRFEAALRLAEVDSPGAEALRSIVADDAFDPDDRAEAAHRLAEVDPARAAEAL
Ga0070710_100167685	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MYEDDYDDRFEAALRLAEDDPVRGAEALRSIAADSAFDPDTRFEAAARLAEVDEPLAAGALRSIVADD
Ga0070710_112601591	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SIAADSAFDPDTRFEAAARLAEVDEPLAAGALRSIVADDAFDPDIRSEAAARLAEVDPA*
Ga0070708_1009943732	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	METTLSKKADTAMHQDEDDDRFEAALRLAEDDPARGAEALRSIAADDAFDPDIRSEAAARLAEVGG*
Ga0070699_1000043267	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MYENDPDDRFEAALRLAEVDPVRAADALRSIVADDAFDPDTRSEAAHRLAEVDPA*
Ga0070730_101233421	3300005537	Surface Soil	MYEDDPDDRFEAALRLAEADPARGAEALRSIVADDAFDPDTRSE
Ga0066708_101678172	3300005576	Soil	MYEDDYDDRFEAALRLAEDDPVRGAEALRSIAADSAFDPDTRFEAAARLAEVD
Ga0070762_106815952	3300005602	Soil	MHEDEDDDRFEAALRVAEDDPVRGAAALRSIVADAAFDPDTRFEA
Ga0070762_112826361	3300005602	Soil	MYENDPDTRFEAALRLSEVDPVRGAETLRSIVADDEFDPDTRFEAAQRLSEVDPVRAAEALRSIVA
Ga0070763_106750392	3300005610	Soil	MYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVDEAQAAEALRS
Ga0070764_101157701	3300005712	Soil	SIVADDAFDPDTRFEAAARLAEVDEVQAAEALRSIVADDAFDPDIRSEAAARLAEVGG*
Ga0070766_106676113	3300005921	Soil	MYENDPDTRFEAALRLSEVDPVRGAEILRSIVADDEFDPDTRFEA
Ga0070712_1001195503	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KAGTAMYENDPDDRFEAALRLAEVDPARGAEALRNIVADDAFDPDTRAEAAHRLAEVDPA
Ga0070765_1011937652	3300006176	Soil	MEMTLSQEADTVMYEDEDDDRFEAALRMAEDDPARGAEALRSIVADDAFDPDTRSEAAA
Ga0070765_1012704182	3300006176	Soil	RFEAAARLAEVDEAQAAEALRSIVADDAFDPDTRSEAAARLAEVGG*
Ga0075425_1003539571	3300006854	Populus Rhizosphere	PDTRAEAAHRLAEVDPARAAEALRSIVADDAFDPDTRAEAAHRLAEVDPA*
Ga0075434_1002798611	3300006871	Populus Rhizosphere	MYENDPDDRFEAALRLAEVDPARGAEALRSIVADDAFDPDDRAEAAHRLAEVDPARAAEA
Ga0075424_1006559841	3300006904	Populus Rhizosphere	RAEAAHRLAEVDPARAAEALRSIVADDAFDPDTRAEAAHRLAEVDPA*
Ga0099827_100218701	3300009090	Vadose Zone Soil	METTLSQEADTAMYEDEDDDRFEAALRMAEDDPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG*
Ga0099827_102309712	3300009090	Vadose Zone Soil	MYENNPDDRFEAALRLAEVDPAQGAEALRSIVADDEFDPDTRSEAAHRLAEVDPALAAEGLAQDRRRRRV*
Ga0116217_109617172	3300009700	Peatlands Soil	DSAYGDALSKKADTAMYEDEDDDRFEAALRLAEDYPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG*
Ga0126373_104318521	3300010048	Tropical Forest Soil	MYENDPDDRFEAALRLAEDHPAQGAEALRSIVADSAFDPDTRSEAAHR
Ga0126373_110029982	3300010048	Tropical Forest Soil	DEAQAAEALRSIVADHGFDPDTRFEAAARLAEVDEAQAAEALRSIVADDGFDPDTRSEAAARLAEIGS*
Ga0126373_119953542	3300010048	Tropical Forest Soil	VVWRELGHATDLAEKAGTAMYETDPGDRFEAALRLSEDDPVRGAEVLDSIVANSEYDPDERFEAA
Ga0074046_106926541	3300010339	Bog Forest Soil	EADIAMCEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG*
Ga0126378_112882151	3300010361	Tropical Forest Soil	MYENDPDDRFETALRLAESDPAQGAKALRDIVADDAFDPDTRSEAAHRLAEVDPA*
Ga0126379_109058331	3300010366	Tropical Forest Soil	MYENDPDDRFEAALRLAEDHPAQGAEALRSIVADSAFDPDTRSEA
Ga0134128_1002642410	3300010373	Terrestrial Soil	MYENDPDDRFEAALRLAEVDPARGAEALRSIVADDAFDPDDRAEAAHRLAEVDPV*
Ga0126381_1015462712	3300010376	Tropical Forest Soil	MYETDPADRFEAALRLSEDDPVRGAEALDSIVASNEY
Ga0136449_1016259882	3300010379	Peatlands Soil	METPFSKKADTAMYEDEDDDRFEAALRLAEDYPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG*
Ga0124844_12548821	3300010868	Tropical Forest Soil	LSVSYARTDLAEKADTAMYENDPDDRFEAALRLAEVDPVQGAEALRRIVADDAFDPDTRSEAAHRLAEVDSA*
Ga0137776_16586554	3300010937	Sediment	MDDNDPDARFEAALRLAEDDPARGAEALRGIVADSAFDPDTRSEAAARLAEIGG*
Ga0137392_100314666	3300011269	Vadose Zone Soil	TLSQEADTAMYEDEDDDRFEAALRMAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVGG*
Ga0137391_100724991	3300011270	Vadose Zone Soil	METTLSQEADTAMYEDEDDDRFEAALRMAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVGG*
Ga0137389_113914332	3300012096	Vadose Zone Soil	METTLSQEADTAMYEDEDDDRFEAALRMAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVDEAQAAEALRSIV
Ga0137379_107087911	3300012209	Vadose Zone Soil	METTLSQEADTAMYEDEDDDRFEAALRMAEDDPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0137377_105895822	3300012211	Vadose Zone Soil	MYENDPDDRFEAALRLAEDDPARAAEALRSIVADNAFDPDTRSEAAHRLAEVDPARAAEA
Ga0181537_100628461	3300014201	Bog	MTLSKKAGTAMYEDDDRFEAALRLAENDPARGAEALRGIVADDAFDPDTRSEAAARLAEVGG*
Ga0181522_105291121	3300014657	Bog	MTLSKKAGTAMYEDDDRFEAALRLAENDPARGAEALRGIVADDAFDPDTRSEAA
Ga0157376_110757591	3300014969	Miscanthus Rhizosphere	MYENDPDDRFEAALRLAEVDPARGAEALRSIVADDAFDPDTRAEAAHRLAEVDPA*
Ga0132258_105348531	3300015371	Arabidopsis Rhizosphere	MYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVDEAQAAEA
Ga0187807_11651762	3300017926	Freshwater Sediment	MYETDPDDRFEAALRLSEVDPVRGAEALDSIVASNGYDSDERFEAALRLSEVDPVR
Ga0187825_101687322	3300017930	Freshwater Sediment	LRSIVADDAFDPDTRFEAAARLAEVDEPLAAGALRSIVADDAFDPDIRSEAAARLAEVDP
Ga0187814_104297091	3300017932	Freshwater Sediment	METTLSQEADIAMYEDEDDDRFEAALRLAEDDPARGAEALRSIVADGAFDPDTRFEAAARLAEVDEAQA
Ga0187809_100168051	3300017937	Freshwater Sediment	MYEDEHDDRFEAAARLAEVHPAQGAKALRSIVADEAFDPDIRSEAAARLAEVD
Ga0187783_110596521	3300017970	Tropical Peatland	MYADDGDDRFEAALRLAEDDPVRGAEALRSVGADPRVDPDTRFEAAARLAEFDEAQAAQVLRGIVADD
Ga0187815_100387524	3300018001	Freshwater Sediment	METPLSKKADTAMYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVDEAQAA
Ga0187815_102383612	3300018001	Freshwater Sediment	DIRSEAAARLAEVDEAQAAGALRSIVADDAFDPDIRSEAAARLAEVGG
Ga0187869_104674331	3300018030	Peatland	MYENDPDTRFDEALRLAEVDPARGADALSSIAASDEFDPDTRFEAAARLAEVDPARAFQSLSSIA
Ga0187867_102407662	3300018033	Peatland	MYENDPDTRFDEALRLAEVDPARGADALSSIAASDEFDPDTRFEAAARLA
Ga0210395_101844443	3300020582	Soil	MYEDEDDDRFEAALRLAEDDPVRGAEALRSIVADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADDAF
Ga0210408_101722652	3300021178	Soil	TRFEAAARLAEVDEARAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0210396_102539422	3300021180	Soil	MYEDEDDTRLEAAARLAEVDEAQAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0210396_114153722	3300021180	Soil	EALRSIAADSAFDPDTRFEAAARLAEVDEPLAAGALRSIVADDAFDPDIRSEAAARLAEVDPA
Ga0210396_115022182	3300021180	Soil	FDPDTRFEAAARLAEVDEARAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0210397_100350081	3300021403	Soil	MYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRSGAAAR
Ga0210397_101445991	3300021403	Soil	LRSIVADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0210397_104748592	3300021403	Soil	MYEDDYDDRFEAALRLAEDDPVRGAEALRSIAADNAFDPDTRFE
Ga0210383_100399271	3300021407	Soil	MYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0210383_104339192	3300021407	Soil	MYETDPDDRFEGALRLWEVDPVRAAVKLRGICASDEFDRDTRDEAAHRLSELELA
Ga0210392_101742831	3300021475	Soil	MYEDDYDDRFEAALRLAEDDPVRGAEALRSIAADNAFDPDTR
Ga0210402_100544291	3300021478	Soil	RSIVADDAFDPDTRSEAAHRLAEVDPARAADALRSIVADDAFDPDTRSEAAHRLAEVDPA
Ga0126371_120263131	3300021560	Tropical Forest Soil	MYENDPDDRFEAALRLAEVDPARAAEALRDIVADEAFDPDTRSEAAHRLAEVDPA
Ga0126371_127161251	3300021560	Tropical Forest Soil	MQTAHSEKADTAMYEDNDRFEAAMRLAEEDPVRGAEALRSIVADDAFDPDTRFEAAARLAEVDEPQA
Ga0207692_107764611	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RFEAAARLAEVDEAQAVEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0207685_100208534	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	DPDDRAEAAHRLAEVDPARAAEALRSIVADDAFDPDTRAEAAHRLAEVDPA
Ga0207646_100872611	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MYENDPDDRFEAALRLAEVDPVRAADALRSIVADDAFDPDTRSEAAHRLAEVDPA
Ga0209005_10519441	3300027037	Forest Soil	MYADDGDDRFEAALRLSEDDPVRGADALRAVAADTRIDPDTRFEAAARLAEVDETQAAGALRSIVGDC
Ga0208099_10414241	3300027096	Forest Soil	KADSTMYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0208097_10151722	3300027173	Forest Soil	MYENDPDTRFEAALRLSEVDPVRGAETLRSIVADDEFDPDTRDEAAHRLSEVDSAWADAFPG
Ga0209112_100083391	3300027817	Forest Soil	MYPSEDDDRFEAALRLAEVDEAQAAVALRGIVADRGFDFDTRSEAAARLAEIGG
Ga0209169_100573621	3300027879	Soil	ADDAFDPDTRFEAAARLAEVDEVQAAEALRSIVADDAFDPDIRSEAAARLAEVGG
Ga0209590_102706781	3300027882	Vadose Zone Soil	DGAFDPDTRFEAAARLAEVDEALAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0209590_103396931	3300027882	Vadose Zone Soil	MYENNPDDRFEAALRLAEVDPAQGAEALRSIVADDEFDPDTRSEAA
Ga0209061_11324762	3300027968	Surface Soil	VDPDTRFEAAARLAEVDEAQAAEALRSIVADRGFDFDTRSEAAARLAEIGG
Ga0302220_101453671	3300028742	Palsa	EMTPSKRADSAMYEDDDRFEAALRLAEDDPARGAEALHSIAADDAFDPDIRSEAAARLAEVGG
Ga0302228_101187083	3300028808	Palsa	MTLSKKADTAMYEDYDDRFEAALRLAEDDPARGAEALHSIVADDAFDPDTRFEA
Ga0302235_103836701	3300028877	Palsa	METPLSKKADTAMYEGEDDDRFEAALRLAEDDPARGAQALRSIVADGAFDPDTRF
Ga0308309_109193692	3300028906	Soil	EAAQRLSEVDPVRAAEALRSIIASDEFDPDTRDEAAHRLSEVDSAWADAFPG
Ga0311352_111579441	3300029944	Palsa	AAEALRSIVADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0311370_108619841	3300030503	Palsa	DPARGAEALHSIAADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADDAFDPDIRSEAAARLAEVGG
Ga0311370_114059562	3300030503	Palsa	ADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0310038_105005072	3300030707	Peatlands Soil	PFSKKADTAMYEDEDDDRFEAALRLAEDYPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0307482_12318632	3300030730	Hardwood Forest Soil	MDDNDPDARFEAALRLAEDDPARGAEALRSIVADDTFDPDTRSEAAARLSEVDPAWSDAFPG
Ga0310686_1012508691	3300031708	Soil	MYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDTRFEAAARLAEVDEARGAEALRSIVAD
Ga0310686_1091945161	3300031708	Soil	MYEDEDDDRFEAALRLAEDDPARGAEALRSIVADDAFDPDT
Ga0318492_107693281	3300031748	Soil	ESGTAMYENDPDDRFEAALRLAEANPAQGAEALRSIVADDAFDPDTRSEAAHRLAEVDPA
Ga0307475_107857901	3300031754	Hardwood Forest Soil	MKTTLAKKAGTTMYEDENDDRFEAALRLAEDDPARGAEALRSIVADDRFDPDTRSEAAARLSEVDPAQAGQPLHGFAPR
Ga0318499_102201402	3300031832	Soil	MYENDPDDRFEAALRLAEANPAQGAEALRSIVADDAFDPDTRSEAAHRLAEVD
Ga0306925_103571884	3300031890	Soil	MYENDPDDRFEAALRLAEANPAQGAEALRSIVADDAFDPDTRSEAAHRLAEVDPARAAEALRSIV
Ga0318520_108839071	3300031897	Soil	MYENDPDDRFEAALRLAEADPAHGAEALRSIVADDAFD
Ga0306921_103820911	3300031912	Soil	MYENDPDDRFEAALRLAEANPAQGAEALRSIVADDAFDPDTRSEAAHRLAEVDPA
Ga0318562_107050471	3300032008	Soil	MYENDPDDRFEAALRLAEANPAQGAEALRSIVADDAFDPDTRSEAAHRL
Ga0318563_101912313	3300032009	Soil	MYENDPDDRFEAALRLAEANPAQGAEALRSIVADDAFDPDTRSEAAHRLAE
Ga0318549_104363261	3300032041	Soil	MYENDPDDRFEAALRLAEANPAQGAEALRSIVADDAFD
Ga0318506_101299451	3300032052	Soil	FDPDTRSEAAHRLAEVDPARAAEALRSIVADDAFDPDTRSEAAHRLAEVDPA
Ga0318575_106702221	3300032055	Soil	DRFEAALRLAEANPAQGAEALRSIVADDAFDPDTRSEAAHRLAEVDPA
Ga0311301_100429689	3300032160	Peatlands Soil	METPFSKKADTAMYEDEDDDRFEAALRLAEDYPARGAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0311301_128130901	3300032160	Peatlands Soil	LRRIVADDAFDPDTRFEAAARLAEVDEAQAAEALRSIVADDAFDPDTRSEAAARLAEVGG
Ga0311301_129015791	3300032160	Peatlands Soil	MYEDEDDDRFEAALRLAEDDPARGANALRSIVADDAFDPDTR
Ga0335079_106402173	3300032783	Soil	MHKDEDDDRFEAAARLAEADPARGAEALRSIVADREIDPDTRFEA
Ga0335078_107470031	3300032805	Soil	MEMTLSEKADIAMYDDEDDDRFEAAVRLAEDDPTQGAEALRSIVADDAFDPDTRFEAAARLAEV
Ga0335081_110051932	3300032892	Soil	PDTRSEAAHRLAEVDPARAAEALRSIVADDAFDPDTRSEAAHRLAEVDPA
Ga0335075_109312991	3300032896	Soil	ALRGIAADGGVDPDTRFEAAARLAEVDEDLAAEALRAIVADDAFDPDIRSEAAARLAEVG
Ga0335072_106557281	3300032898	Soil	MGRPSLNSGYGDNLSKKADTAMYEDQDDDRFEAALRLAEVDQAQAAEALRSIVADDKFGPDIRSEAAARLVEVSG
Ga0335077_101407122	3300033158	Soil	MYENDPDDRFEAALRLAEVDPARGAEALRSIVADDAFDPDTRSEAAHRLAEVDPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083070

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences