Basic Information | |
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Family ID | F082990 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 113 |
Average Sequence Length | 49 residues |
Representative Sequence | MNIIPRKEIPEDILEDSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTL |
Number of Associated Samples | 99 |
Number of Associated Scaffolds | 113 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 12.39 % |
% of genes near scaffold ends (potentially truncated) | 99.12 % |
% of genes from short scaffolds (< 2000 bps) | 88.50 % |
Associated GOLD sequencing projects | 98 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.43 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (100.000 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.044 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.858 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (57.522 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 37.18% β-sheet: 0.00% Coil/Unstructured: 62.82% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 113 Family Scaffolds |
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PF00881 | Nitroreductase | 86.73 |
PF13551 | HTH_29 | 0.88 |
PF03544 | TonB_C | 0.88 |
PF13463 | HTH_27 | 0.88 |
PF01145 | Band_7 | 0.88 |
PF03795 | YCII | 0.88 |
PF02954 | HTH_8 | 0.88 |
PF02321 | OEP | 0.88 |
PF02838 | Glyco_hydro_20b | 0.88 |
PF07676 | PD40 | 0.88 |
PF04389 | Peptidase_M28 | 0.88 |
PF07228 | SpoIIE | 0.88 |
PF00849 | PseudoU_synth_2 | 0.88 |
PF00383 | dCMP_cyt_deam_1 | 0.88 |
PF03786 | UxuA | 0.88 |
COG ID | Name | Functional Category | % Frequency in 113 Family Scaffolds |
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COG1538 | Outer membrane protein TolC | Cell wall/membrane/envelope biogenesis [M] | 1.77 |
COG0564 | Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific | Translation, ribosomal structure and biogenesis [J] | 0.88 |
COG0810 | Periplasmic protein TonB, links inner and outer membranes | Cell wall/membrane/envelope biogenesis [M] | 0.88 |
COG1187 | Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605 | Translation, ribosomal structure and biogenesis [J] | 0.88 |
COG1312 | D-mannonate dehydratase | Carbohydrate transport and metabolism [G] | 0.88 |
COG2350 | YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.88 |
COG3525 | N-acetyl-beta-hexosaminidase | Carbohydrate transport and metabolism [G] | 0.88 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 100.00 % |
Unclassified | root | N/A | 0.00 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300000793|AF_2010_repII_A001DRAFT_10094726 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 632 | Open in IMG/M |
3300000955|JGI1027J12803_107492250 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 533 | Open in IMG/M |
3300002914|JGI25617J43924_10360383 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 505 | Open in IMG/M |
3300004080|Ga0062385_11059919 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 547 | Open in IMG/M |
3300004633|Ga0066395_10800357 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 566 | Open in IMG/M |
3300004635|Ga0062388_102587569 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 533 | Open in IMG/M |
3300005332|Ga0066388_103030255 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 858 | Open in IMG/M |
3300005332|Ga0066388_106842903 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 574 | Open in IMG/M |
3300005332|Ga0066388_107588700 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 544 | Open in IMG/M |
3300005436|Ga0070713_100109672 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2405 | Open in IMG/M |
3300005841|Ga0068863_100775538 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 955 | Open in IMG/M |
3300005921|Ga0070766_10067276 | All Organisms → cellular organisms → Bacteria | 2054 | Open in IMG/M |
3300006028|Ga0070717_11116539 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 718 | Open in IMG/M |
3300006176|Ga0070765_100280866 | All Organisms → cellular organisms → Bacteria | 1534 | Open in IMG/M |
3300006914|Ga0075436_100988189 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 631 | Open in IMG/M |
3300006954|Ga0079219_11673426 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 588 | Open in IMG/M |
3300009093|Ga0105240_11493156 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 709 | Open in IMG/M |
3300009176|Ga0105242_10051957 | All Organisms → cellular organisms → Bacteria | 3343 | Open in IMG/M |
3300009177|Ga0105248_12864363 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 550 | Open in IMG/M |
3300009624|Ga0116105_1024114 | All Organisms → cellular organisms → Bacteria | 1293 | Open in IMG/M |
3300010048|Ga0126373_12690134 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 555 | Open in IMG/M |
3300010048|Ga0126373_13192447 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 510 | Open in IMG/M |
3300010159|Ga0099796_10231840 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 760 | Open in IMG/M |
3300010339|Ga0074046_10530359 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 701 | Open in IMG/M |
3300010341|Ga0074045_10230390 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1231 | Open in IMG/M |
3300010359|Ga0126376_12893616 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 530 | Open in IMG/M |
3300010366|Ga0126379_12108884 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 665 | Open in IMG/M |
3300010371|Ga0134125_11496825 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 735 | Open in IMG/M |
3300010371|Ga0134125_12832440 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 527 | Open in IMG/M |
3300010376|Ga0126381_100995444 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1209 | Open in IMG/M |
3300010376|Ga0126381_102802200 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 696 | Open in IMG/M |
3300010376|Ga0126381_103976013 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 576 | Open in IMG/M |
3300010379|Ga0136449_102374829 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 766 | Open in IMG/M |
3300010398|Ga0126383_12348883 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 619 | Open in IMG/M |
3300011265|Ga0151613_1267375 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 1192 | Open in IMG/M |
3300012202|Ga0137363_11815075 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 502 | Open in IMG/M |
3300012210|Ga0137378_11493564 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 587 | Open in IMG/M |
3300012211|Ga0137377_11611770 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 573 | Open in IMG/M |
3300012923|Ga0137359_11630426 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 533 | Open in IMG/M |
3300014167|Ga0181528_10089901 | All Organisms → cellular organisms → Bacteria | 1674 | Open in IMG/M |
3300016404|Ga0182037_10082861 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2257 | Open in IMG/M |
3300016404|Ga0182037_11927791 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 529 | Open in IMG/M |
3300017924|Ga0187820_1239198 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 579 | Open in IMG/M |
3300017924|Ga0187820_1274945 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 548 | Open in IMG/M |
3300017928|Ga0187806_1148926 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 771 | Open in IMG/M |
3300017933|Ga0187801_10345583 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 611 | Open in IMG/M |
3300017948|Ga0187847_10415336 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 740 | Open in IMG/M |
3300017955|Ga0187817_10046137 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2677 | Open in IMG/M |
3300017959|Ga0187779_10058278 | All Organisms → cellular organisms → Bacteria | 2263 | Open in IMG/M |
3300017966|Ga0187776_11537634 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 512 | Open in IMG/M |
3300017970|Ga0187783_11136575 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 563 | Open in IMG/M |
3300018034|Ga0187863_10245596 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 995 | Open in IMG/M |
3300018047|Ga0187859_10144872 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1258 | Open in IMG/M |
3300018088|Ga0187771_10378762 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1192 | Open in IMG/M |
3300018482|Ga0066669_10418675 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1141 | Open in IMG/M |
3300019184|Ga0184590_114882 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 723 | Open in IMG/M |
3300020150|Ga0187768_1135189 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 567 | Open in IMG/M |
3300020580|Ga0210403_10910668 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 693 | Open in IMG/M |
3300020580|Ga0210403_11518255 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 503 | Open in IMG/M |
3300020583|Ga0210401_10524924 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 1046 | Open in IMG/M |
3300021088|Ga0210404_10868385 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 516 | Open in IMG/M |
3300021401|Ga0210393_10023822 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 4765 | Open in IMG/M |
3300021406|Ga0210386_11130061 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 664 | Open in IMG/M |
3300021407|Ga0210383_11541749 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 548 | Open in IMG/M |
3300021433|Ga0210391_10947138 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 671 | Open in IMG/M |
3300021444|Ga0213878_10419171 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 584 | Open in IMG/M |
3300021559|Ga0210409_10633289 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 939 | Open in IMG/M |
3300021559|Ga0210409_10832129 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 796 | Open in IMG/M |
3300021560|Ga0126371_10100410 | All Organisms → cellular organisms → Bacteria | 2881 | Open in IMG/M |
3300021560|Ga0126371_12042055 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 690 | Open in IMG/M |
3300021560|Ga0126371_13575047 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 524 | Open in IMG/M |
3300024227|Ga0228598_1054957 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 790 | Open in IMG/M |
3300025929|Ga0207664_10568617 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1017 | Open in IMG/M |
3300026116|Ga0207674_10058981 | All Organisms → cellular organisms → Bacteria | 3886 | Open in IMG/M |
3300026551|Ga0209648_10084880 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter | 2632 | Open in IMG/M |
3300027371|Ga0209418_1035886 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 867 | Open in IMG/M |
3300027545|Ga0209008_1026456 | All Organisms → cellular organisms → Bacteria | 1354 | Open in IMG/M |
3300027590|Ga0209116_1110371 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 604 | Open in IMG/M |
3300027604|Ga0208324_1001003 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 11287 | Open in IMG/M |
3300027662|Ga0208565_1000579 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 26252 | Open in IMG/M |
3300027826|Ga0209060_10006964 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 7547 | Open in IMG/M |
3300027826|Ga0209060_10335829 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 688 | Open in IMG/M |
3300027829|Ga0209773_10210779 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 812 | Open in IMG/M |
3300027853|Ga0209274_10669606 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 536 | Open in IMG/M |
3300027879|Ga0209169_10641387 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 553 | Open in IMG/M |
3300027895|Ga0209624_10590526 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 737 | Open in IMG/M |
3300027903|Ga0209488_10907750 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 617 | Open in IMG/M |
3300027908|Ga0209006_10454733 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1072 | Open in IMG/M |
3300027908|Ga0209006_10472785 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 1048 | Open in IMG/M |
3300028798|Ga0302222_10385832 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 547 | Open in IMG/M |
3300029951|Ga0311371_11185451 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 884 | Open in IMG/M |
3300030862|Ga0265753_1143738 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 512 | Open in IMG/M |
3300031231|Ga0170824_106340125 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 1134 | Open in IMG/M |
3300031247|Ga0265340_10148573 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 1069 | Open in IMG/M |
3300031543|Ga0318516_10391844 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 801 | Open in IMG/M |
3300031544|Ga0318534_10662435 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 591 | Open in IMG/M |
3300031753|Ga0307477_10892002 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 587 | Open in IMG/M |
3300031910|Ga0306923_12386255 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 525 | Open in IMG/M |
3300031912|Ga0306921_10380883 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1648 | Open in IMG/M |
3300032008|Ga0318562_10244695 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1041 | Open in IMG/M |
3300032042|Ga0318545_10229411 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 666 | Open in IMG/M |
3300032055|Ga0318575_10265963 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 866 | Open in IMG/M |
3300032059|Ga0318533_10578771 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 824 | Open in IMG/M |
3300032180|Ga0307471_100673574 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 1198 | Open in IMG/M |
3300032770|Ga0335085_10885481 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 974 | Open in IMG/M |
3300032783|Ga0335079_11632549 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 632 | Open in IMG/M |
3300032805|Ga0335078_11099839 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 929 | Open in IMG/M |
3300032828|Ga0335080_11718246 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 615 | Open in IMG/M |
3300032829|Ga0335070_11481801 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 619 | Open in IMG/M |
3300032895|Ga0335074_10676246 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1003 | Open in IMG/M |
3300033290|Ga0318519_10284807 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 964 | Open in IMG/M |
3300033888|Ga0334792_145803 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola | 606 | Open in IMG/M |
3300034282|Ga0370492_0445292 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 525 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 15.04% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 9.73% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.31% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 5.31% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 5.31% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 4.42% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 4.42% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.54% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.54% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.54% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 2.65% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.65% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.65% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.65% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.77% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.77% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.77% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.77% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.77% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 1.77% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.77% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 1.77% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.89% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 0.89% |
Sediment | Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment | 0.89% |
Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil | 0.89% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.89% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.89% |
Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.89% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.89% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.89% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.89% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.89% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000793 | Forest soil microbial communities from Amazon forest - 2010 replicate II A001 | Environmental | Open in IMG/M |
3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009624 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 | Environmental | Open in IMG/M |
3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
3300010341 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300011265 | Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 K-mer 55 | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300014167 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG | Environmental | Open in IMG/M |
3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
3300017924 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5 | Environmental | Open in IMG/M |
3300017928 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1 | Environmental | Open in IMG/M |
3300017933 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1 | Environmental | Open in IMG/M |
3300017948 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10 | Environmental | Open in IMG/M |
3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
3300017966 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG | Environmental | Open in IMG/M |
3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
3300018047 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10 | Environmental | Open in IMG/M |
3300018088 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019184 | Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020150 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021444 | Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02 | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Host-Associated | Open in IMG/M |
3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026551 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes) | Environmental | Open in IMG/M |
3300027371 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027545 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027590 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027604 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes) | Environmental | Open in IMG/M |
3300027662 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes) | Environmental | Open in IMG/M |
3300027826 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027829 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes) | Environmental | Open in IMG/M |
3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
3300027879 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes) | Environmental | Open in IMG/M |
3300027895 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
3300028798 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2 | Environmental | Open in IMG/M |
3300029951 | III_Palsa_N1 coassembly | Environmental | Open in IMG/M |
3300030862 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Host-Associated | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031544 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26 | Environmental | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300032008 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18 | Environmental | Open in IMG/M |
3300032042 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26 | Environmental | Open in IMG/M |
3300032055 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23 | Environmental | Open in IMG/M |
3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
3300032783 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3 | Environmental | Open in IMG/M |
3300032805 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2 | Environmental | Open in IMG/M |
3300032828 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4 | Environmental | Open in IMG/M |
3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
3300032895 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3 | Environmental | Open in IMG/M |
3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
3300033888 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1 | Environmental | Open in IMG/M |
3300034282 | Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
AF_2010_repII_A001DRAFT_100947261 | 3300000793 | Forest Soil | MIPESRIPDDILKDSVLAHLAAAYFAVGKRLERKTGCSATRGFILSSLRH |
JGI1027J12803_1074922501 | 3300000955 | Soil | TAPVAETSRSHSNGPMIIPRKDIPPDILRDSVLAHVAAAYFSVGKRLERKTECSATRGFILST |
JGI25617J43924_103603832 | 3300002914 | Grasslands Soil | MNMLSRKEIPEDILKGSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTLRDGTT |
Ga0062385_110599192 | 3300004080 | Bog Forest Soil | MTIIPRQEVPQHILKDSVLAHIAAAYFSVGKQLEKKTNCSATRGFIL |
Ga0066395_108003571 | 3300004633 | Tropical Forest Soil | MNIPKKEIPEDILKDSVLAHIAAAYFSVGRRLERKTQCSATRGFILSTLRGGL |
Ga0062388_1025875692 | 3300004635 | Bog Forest Soil | MTIIPRQEVPQHILKDSVLAHIAAAYFSVGKQLEKKTNCSAT |
Ga0066388_1030302552 | 3300005332 | Tropical Forest Soil | MNILPKTEIPEDILKDSVLAHIAAAYFSVGRRLERKTQCSATR |
Ga0066388_1068429032 | 3300005332 | Tropical Forest Soil | MNMLPKKEIPDDILRDSILAHIAAAYFSVGRRLERKTRCSATRGFILS |
Ga0066388_1075887002 | 3300005332 | Tropical Forest Soil | MNMLPKREIPEDILKDSVLAHIAAAYFSVGRRLERKTQCSATRGFILST |
Ga0070713_1001096721 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTLPKREIPDDVLEGSIIARVAAAYFSVGKRLERKTQCSATRG |
Ga0068863_1007755381 | 3300005841 | Switchgrass Rhizosphere | MNMLPKNEIPDDILKDSVLAHIAAAYFSVGKRLERKTQCSATRG |
Ga0070766_100672763 | 3300005921 | Soil | MNILPGKEIPDDILKDSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTLRGGTT |
Ga0070717_111165391 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MNSLPKREVPEELLEGSVLARIAAAYFSVGKRLERKT |
Ga0070765_1002808663 | 3300006176 | Soil | MIVVPKKDIPQDILRDSVLAHIAAAYFSVGKRLERKTRCSATRGFILSTLR |
Ga0075436_1009881893 | 3300006914 | Populus Rhizosphere | MIVRKPVPEDILRDSVLAHIAAAYFSVGKRLERKTGCSATRGFILN |
Ga0079219_116734262 | 3300006954 | Agricultural Soil | MTTLPKQDIPQDILSDSVLAHVAAAYFSVGKRLERKTQCSATRGFILSALRG |
Ga0105240_114931561 | 3300009093 | Corn Rhizosphere | MSALPRQEIPADILNDSVLAHIAAAYFSASKRLERKTQCSSTRGF |
Ga0105242_100519576 | 3300009176 | Miscanthus Rhizosphere | MSTIIQNDISDEILKDSVLAHIAAAYFSVGKRLERKTQCSSTRGFILSTLRGDA |
Ga0105248_128643632 | 3300009177 | Switchgrass Rhizosphere | MNIIPQKLVPQNILKDSVLAHIAAAYFSVGKRLERMTGCSTTRGFI |
Ga0116105_10241143 | 3300009624 | Peatland | MNILPRQEIPDDILKDSVLAHIAAAYFSVGKRLEQQTRCSATRGFILSTLRGGTAL |
Ga0126373_126901341 | 3300010048 | Tropical Forest Soil | MNIPKKEIPEDILKDSVLAHVAAAYFSVGKRLERKTSCSATRGFILSTLRGG |
Ga0126373_131924472 | 3300010048 | Tropical Forest Soil | MNIIPRQEVPEDILEDSVLAHVAAAYFSVGKRLERRTQCSATRGFILS |
Ga0099796_102318402 | 3300010159 | Vadose Zone Soil | MNMLPSKEIPEEILNDSVLAHIAAAYFAVGKRLERKTQCSATRGFILSTLRDGT |
Ga0074046_105303591 | 3300010339 | Bog Forest Soil | MNIFPRSEIPDDILKDSVLANIAAAYFSVGKRLERKTQCSATRGFI |
Ga0074045_102303903 | 3300010341 | Bog Forest Soil | MNILPGKEIPDDILKDSVLAHIAAAYFSVGKKLERKTQCSATRGFILSTLRD |
Ga0126376_128936162 | 3300010359 | Tropical Forest Soil | MNMLPKNDIPGDILKDSVLAHIAAAYFSVGKKLERKTQCSATRGFILS |
Ga0126379_121088841 | 3300010366 | Tropical Forest Soil | MNIPKKEIPEDILKDSVLAHVAAAYFSVGKRLERKTSCSATRGFILST |
Ga0134125_114968251 | 3300010371 | Terrestrial Soil | MNVVPQQQIPNDILRDSILAHIAAAYFSVGRQLERKTQCSATRGF |
Ga0134125_128324402 | 3300010371 | Terrestrial Soil | MNLLPKNDIPGDILKDSVLAHFAAAYFSVAKKLERKTQCSVTRGY |
Ga0126381_1009954441 | 3300010376 | Tropical Forest Soil | MSVLVERKIPRDILEDSVLAHVAAAYFAMGKRLERKTQCSATRGFILSTFR |
Ga0126381_1028022002 | 3300010376 | Tropical Forest Soil | MSLLVERKIPQDILEDSVLAHVAAAYFAMGKRLERKTQCSATRGFILSTFR |
Ga0126381_1039760131 | 3300010376 | Tropical Forest Soil | MNMLPKNDIPGDILKDSVLAHIAAAYFSVGKKLERKTQCSATRGFILSTLR |
Ga0136449_1023748292 | 3300010379 | Peatlands Soil | MNILPRREIPDDILKDSVLANIAAAYFSVGKRLERKTQCSATRGFILS |
Ga0126383_123488831 | 3300010398 | Tropical Forest Soil | MIIVPRKDIPQDILSDSVLAHVAAAYFSVGKRLERKTRCSATRGF |
Ga0151613_12673752 | 3300011265 | Sediment | MNLLPKREIPEDILRDSVLAHIAAAYFSVGKRLERKTRCSATXXXXXXX |
Ga0137363_118150751 | 3300012202 | Vadose Zone Soil | MIIVPKKDIPQDILRDSVLAHVSAAYFSVGKRLERKTRCSATRGFILSTLR |
Ga0137378_114935641 | 3300012210 | Vadose Zone Soil | MIIVPRKVPEDILSDSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTLRGDAR |
Ga0137377_116117701 | 3300012211 | Vadose Zone Soil | MIIVPKKDIPQDILRDSVLAHVSAAYFSVGKKLERKTRCSATRGFIL |
Ga0137359_116304262 | 3300012923 | Vadose Zone Soil | MIIVPKKDIPHDILRDSVLAHVSAAYFSVGKRLERKTRCSATRGFILSTLRGDAVLN |
Ga0181528_100899013 | 3300014167 | Bog | MNMLPGKEIPEDILQDSVLAHVAAAYFSVGKKLQRKTECSATRGFILSTLR |
Ga0182037_100828611 | 3300016404 | Soil | MTIIPRKEIPEDILKDSVLAHIAAAYFSVGKRLERKTQCSATRGFI |
Ga0182037_119277912 | 3300016404 | Soil | MNIIPRKEIPEDILEDSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTL |
Ga0187820_12391982 | 3300017924 | Freshwater Sediment | MNIIPRNEIPDDILEDSVLAHIAAAYFSVGKRLERKSQCSATRGFILSTLRGGAALN |
Ga0187820_12749452 | 3300017924 | Freshwater Sediment | MNIVQPASIPENILQDSILARIAAAYFSVSRKLERKT |
Ga0187806_11489261 | 3300017928 | Freshwater Sediment | MNIVEKKLIPEDILQDSVLARIAAAYFSVGKQLERKTQCSATRAFIMS |
Ga0187801_103455831 | 3300017933 | Freshwater Sediment | MIPVETKAVPENILRDSVLAHIAAAYFSVGKQLERKTRCSATRGFILSTLR |
Ga0187847_104153361 | 3300017948 | Peatland | MIIVPKKDIPPDILRDSVLAHIAAAYFSVGKRLERKTRCSATRGFIL |
Ga0187817_100461371 | 3300017955 | Freshwater Sediment | MIPVETKAVPENILRDSVLAHIAAAYFSVGKQLERKTRCSATRGFILSTL |
Ga0187779_100582781 | 3300017959 | Tropical Peatland | MIIVPKTDIPQEILSDSVLAHVAAAYFSVGKQLERKTRCSATRGF |
Ga0187776_115376342 | 3300017966 | Tropical Peatland | MIPESKIPDDILKDSVLAHLAAAYFAVGKRLERKTGCSATRGFILSILR |
Ga0187783_111365751 | 3300017970 | Tropical Peatland | MTLPIDKRQIPEEILRDSVLAHVAAAYFAVGKRLERKTQCSATRGFILSTLR |
Ga0187863_102455962 | 3300018034 | Peatland | MNILPRKEIPDDILKDSVLAHVAAAYFSVGKRLERKTQCSA |
Ga0187859_101448723 | 3300018047 | Peatland | MITVPKKDIPQDILRDSVLAHVAAAYFSVGKSLERKTRCSATRGFILSTLRG |
Ga0187771_103787623 | 3300018088 | Tropical Peatland | MNIIPRKEIPEDILQDSVLAHIAAAYFSVGKRLERKTGCS |
Ga0066669_104186753 | 3300018482 | Grasslands Soil | MNVVPRKEIPEDILKDSVLAHIAAAYFSIGKRLERKTHCSATR |
Ga0184590_1148822 | 3300019184 | Soil | VAAASRDHGNRPMIVVSNIIVPKKDIPQDILRDSVLAHVAAAYFSVGKRLERKTRCSATRGFI |
Ga0187768_11351891 | 3300020150 | Tropical Peatland | MIPIESRTIPEDILKDSVLAHIAAAYFSVGKQLERKTGCSATRGFILSTLR |
Ga0210403_109106681 | 3300020580 | Soil | MNIVPRKEVPEDILKDSVLAHIAAAYFSVGKRLERKTRCSATR |
Ga0210403_115182551 | 3300020580 | Soil | MNILPRKEIPDDILKDSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTLRGG |
Ga0210401_105249243 | 3300020583 | Soil | MAKTSRCHGDRPMNILPRKEIPGDILRDSVLANIAAAYFSVGKRLERKTQCSATRGFILS |
Ga0210404_108683851 | 3300021088 | Soil | MITGSNKDVPKKDIPQDILRDSVLAHVAAAYFSVGKRLERKTRCSATRGFILS |
Ga0210393_100238221 | 3300021401 | Soil | MIIVPKKDIPQDILKDSVLAHVSAAYFSVGRRLERKTRCSATRGFILSTLR |
Ga0210386_111300611 | 3300021406 | Soil | MISAESKTIPENILKDSVLAHIAAAYFSVGKQLERKTRCSSTRGF |
Ga0210383_115417492 | 3300021407 | Soil | MIIVPKKDIPENILSDSVLAHVAAAYFSVGKRLERKTRCSATRGFI |
Ga0210391_109471381 | 3300021433 | Soil | MNILPGKEIPDDILKDSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTLRGGT |
Ga0213878_104191711 | 3300021444 | Bulk Soil | MNELVERKIPDDILKDSLLAHLAAAYFAVGKQLERKTQCSATRGF |
Ga0210409_106332892 | 3300021559 | Soil | MNMLPRKEIPEEILNDSVLAHIAAAYFAVGKRLER |
Ga0210409_108321292 | 3300021559 | Soil | MIIAPKKDIPQDILKDSVLAHIAAAYFSVGKRLERKTRCSATRGF |
Ga0126371_101004101 | 3300021560 | Tropical Forest Soil | VAQASGSHGDGPVITVPRRDIPQDILKDSVLAHVAAAYFSVGKQLERKTRCSATRGFILS |
Ga0126371_120420551 | 3300021560 | Tropical Forest Soil | MNIIPRKEIPKDILKDSILAHIAAAYFSAGKRLERKTQCSATRGFILSTLR |
Ga0126371_135750471 | 3300021560 | Tropical Forest Soil | MNILPKSEIPENILKDSVLAHIAAAYFSVGRRLERKTQCSATRGFILSTLRDGVI |
Ga0228598_10549571 | 3300024227 | Rhizosphere | MIVVSNIIVPKKDIPQDILRDSVLAHVAAAYFSVGKRLERKTRCSATRG |
Ga0207664_105686171 | 3300025929 | Agricultural Soil | MSTLIQSDIPDDILKNSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTL |
Ga0207674_100589814 | 3300026116 | Corn Rhizosphere | MNMLPKNEIPDDILKDSVLAHIAAAYFSVGKRLERKTQCSATRGFVLSALRGG |
Ga0209648_100848804 | 3300026551 | Grasslands Soil | MNMLPRKEIPEDILKGSVLAHIAAAYFSVGKRLER |
Ga0209418_10358862 | 3300027371 | Forest Soil | MIIVPKKDIPQDILRDSVLAHVAAAYFSVGKRLERKTRCSATRGF |
Ga0209008_10264563 | 3300027545 | Forest Soil | MNMLPSQEIPEEILNDSVLAHIAAAYFAVGKRLERKTQCSATRGFIL |
Ga0209116_11103712 | 3300027590 | Forest Soil | MNILPGKEIPDDILKDSVLAHIAAAYFSVGKRLEQQTQCSATRGFILSTL |
Ga0208324_10010031 | 3300027604 | Peatlands Soil | MNILPRKEIPDDILKDSVLAHIAAAYFSVGKRLEQKTQCSATRGFILS |
Ga0208565_100057923 | 3300027662 | Peatlands Soil | MNILPRKEIPDDILKDSVLAHIAAAYFSVGKRLEQKTQCSATRG |
Ga0209060_100069641 | 3300027826 | Surface Soil | MSGSQKTIVPKKDIPQDILSDSVLAHVAAAYFSVGKRLERKTRCSATRGFILSTLRGGA |
Ga0209060_103358291 | 3300027826 | Surface Soil | MIVQKPIPENILKDSVLAHVAAAYFSVGKKLERKTHCSATRGFILSTLRDGAEP |
Ga0209773_102107791 | 3300027829 | Bog Forest Soil | MILVEPKQIPEQILKDSVLSHIAAAYFSVGKQLERKTRCSA |
Ga0209274_106696062 | 3300027853 | Soil | MIIVPKKDIPQDILRDSVLAHVFAAYFSVGKRLERKTQCSATRGFILSTLRGGA |
Ga0209169_106413871 | 3300027879 | Soil | MIVVPNVIVPKKDIPQDILRDSVLAHVAAAYFSVGKRLERKTRCSATRGF |
Ga0209624_105905261 | 3300027895 | Forest Soil | MNIVPRQEVPADILKDSVLAHIAAAYFSVGKRLERKT |
Ga0209488_109077501 | 3300027903 | Vadose Zone Soil | MNIVPGKEVPEDILKDSVLAHIAAAYFSVGKRLER |
Ga0209006_104547331 | 3300027908 | Forest Soil | MNIVPRKEIPEDILKDSVLAHIAAAYFSVGKRLERKTRCSATRG |
Ga0209006_104727851 | 3300027908 | Forest Soil | MNMFPRKEIPEEILNDSVLAHIAAAYFAVGKRLERRTQCSATRGFILSTLRDG |
Ga0302222_103858321 | 3300028798 | Palsa | MNVTPMNMVPRKEVPEDILKDSVLAHIAAAYFSVGKRLERKTRCSATRGFILSTLRG |
Ga0311371_111854512 | 3300029951 | Palsa | MNVTPMNMVPRKEVPKDILKDSVLAHIAAAYFSVGKRLERKTRCSATRGFILSTLRGGAT |
Ga0265753_11437382 | 3300030862 | Soil | MNIVPRQEVPADILKDSVLAHIAAAYFSVGKRLERKTRCSATRGFI |
Ga0170824_1063401251 | 3300031231 | Forest Soil | VNILPGKEIPDDILKDSVLANIAAAYFSVGKRLERKTQC |
Ga0265340_101485731 | 3300031247 | Rhizosphere | MNILPKKEIPDDILNDSVLAHLASAYFSVGKRLERKTQCSATRGFILSTLRSGSELNL |
Ga0318516_103918442 | 3300031543 | Soil | MSLLVERKIPQDILEDSVLAHVAAAYFAMGKRLERKTQCSATRGFILSTF |
Ga0318534_106624352 | 3300031544 | Soil | VAKASRRHGNGPMIILPRKDIPQDILSDSVLAHVAAAYFSVGKRLERKTRCSATRGFILS |
Ga0307477_108920021 | 3300031753 | Hardwood Forest Soil | MIVVPNVIVPKKDIPQDILRDSVLAHVAAAYFSVGKRLERKTRCSATRGFILSTLRSG |
Ga0306923_123862552 | 3300031910 | Soil | MNIIPRKEVSEDILEDSVLAHIAAAYFSVGKRLERKTR |
Ga0306921_103808831 | 3300031912 | Soil | MNIIPRKDVPEEILEDSVLAHIAAAYFSVGKRLERKTQCSATRGFIL |
Ga0318562_102446951 | 3300032008 | Soil | MIILPRKDIPQDILSDSVLAHIAAAYFSVGKRLERKTRCSATRGFILST |
Ga0318545_102294111 | 3300032042 | Soil | MSLLVERKIPQDILEDSVLAHVAAAYFAMGKRLERKTQCSATRGFILS |
Ga0318575_102659632 | 3300032055 | Soil | VAEASRRHGNGPMIIVPRKDIPQDILSDSVLAHIAAAYFSVGKRLERKTRCSATRGFILS |
Ga0318533_105787712 | 3300032059 | Soil | MNILPKKEIPADILKDSVLAHIAAAYFSVGKRLERKTKCSATRGFILS |
Ga0307471_1006735741 | 3300032180 | Hardwood Forest Soil | MNILPRKEIPDDILKDSVLAHIAAAYFSVGKRLEQKTQC |
Ga0335085_108854812 | 3300032770 | Soil | MNIIPKKEVPENILKDSVLAHIAAAYFSVGKRLERRTQCSATRGFILSTLRGGVTL |
Ga0335079_116325491 | 3300032783 | Soil | MMIVEKPVRDDILKDSLLAHIAAAYFSVGKQLERRTQCSA |
Ga0335078_110998391 | 3300032805 | Soil | MNIIPKKEVPENILKDSVLAHIAAAYFSVGKRLERRTQCSA |
Ga0335080_117182462 | 3300032828 | Soil | MIIVPRKDIPQDILRDSVLAHVAAAYFSVGKRLERKTRCSATRGFILSTLRGGAVLN |
Ga0335070_114818012 | 3300032829 | Soil | MNVLPKQEIPSEILEGSVLGHIAAAYYSVGKRLERKTQCSATRGFILSTLRGGATLN |
Ga0335074_106762461 | 3300032895 | Soil | MNILPRTEVPDDILEGSVLARVAAAYFSVGKRLERKTRCSATRGFILSAL |
Ga0318519_102848071 | 3300033290 | Soil | MNIIPRKDVPEDILENSVLAHIAAAYFSVGKRLERKTRCSATRGF |
Ga0334792_145803_2_154 | 3300033888 | Soil | MINVPTKGVPEDILSDSVLAHIAAAYFSVGKRLERKTQCSATRGFILSTLG |
Ga0370492_0445292_378_524 | 3300034282 | Untreated Peat Soil | VIALDNKSIPEDILKDSVLAHIAAAYFSVGKRLERKTQCSATRGFILST |
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