Metagenome / Metatranscriptome Family F082981

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082981
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	56 residues
Representative Sequence	MGLENKIAYAMKVLPSATWRALNSPVRGPVHLIFAMADHFEPAIDPEDGQKRVPRS
Number of Associated Samples	102
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.42 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	82.30 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.575 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (12.389 % of family members)
Environment Ontology (ENVO)	Unclassified (42.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.81% β-sheet: 2.38% Coil/Unstructured: 73.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF08241	Methyltransf_11	37.17
PF04932	Wzy_C	9.73
PF00535	Glycos_transf_2	1.77
PF13692	Glyco_trans_1_4	1.77
PF13950	Obsolete Pfam Family	1.77
PF01656	CbiA	0.88
PF16363	GDP_Man_Dehyd	0.88
PF02776	TPP_enzyme_N	0.88
PF03720	UDPG_MGDP_dh_C	0.88
PF13489	Methyltransf_23	0.88
PF01370	Epimerase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	9.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.33 %
Unclassified	root	N/A	4.42 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.94 %
Unclassified	root	N/A	4.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.94 %
Unclassified	root	N/A	4.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.65 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.94 %
Unclassified	root	N/A	4.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.65 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10270008	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300001356\|JGI12269J14319_10290797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	592	Open in IMG/M
3300001593\|JGI12635J15846_10576468	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300004080\|Ga0062385_10820734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300004152\|Ga0062386_100280577	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300004631\|Ga0058899_11081138	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004635\|Ga0062388_100682499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300005167\|Ga0066672_10431492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300005467\|Ga0070706_100441950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300005468\|Ga0070707_100391842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300005591\|Ga0070761_10740044	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005610\|Ga0070763_10825511	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006176\|Ga0070765_100547199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300009029\|Ga0066793_10030202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3008	Open in IMG/M
3300009088\|Ga0099830_10222210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1485	Open in IMG/M
3300009137\|Ga0066709_100033441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5504	Open in IMG/M
3300009143\|Ga0099792_10849957	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009520\|Ga0116214_1120357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300009521\|Ga0116222_1501814	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009523\|Ga0116221_1433051	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300009623\|Ga0116133_1006739	All Organisms → cellular organisms → Bacteria → Acidobacteria	2876	Open in IMG/M
3300009638\|Ga0116113_1072590	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300009638\|Ga0116113_1121138	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300009644\|Ga0116121_1090523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300009646\|Ga0116132_1060801	All Organisms → cellular organisms → Bacteria → Acidobacteria	1196	Open in IMG/M
3300009672\|Ga0116215_1046197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1980	Open in IMG/M
3300009672\|Ga0116215_1121924	Not Available	1164	Open in IMG/M
3300009700\|Ga0116217_10340159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300009764\|Ga0116134_1001907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10368	Open in IMG/M
3300009824\|Ga0116219_10588354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300009824\|Ga0116219_10615663	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010379\|Ga0136449_101888017	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300012200\|Ga0137382_10603373	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012200\|Ga0137382_10969250	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300012205\|Ga0137362_10083728	All Organisms → cellular organisms → Bacteria → Acidobacteria	2664	Open in IMG/M
3300012361\|Ga0137360_11240084	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012361\|Ga0137360_11334502	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012363\|Ga0137390_11007186	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012469\|Ga0150984_104924912	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300012923\|Ga0137359_10738401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300012925\|Ga0137419_10130860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1786	Open in IMG/M
3300012929\|Ga0137404_11331692	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300014159\|Ga0181530_10155997	Not Available	1296	Open in IMG/M
3300014199\|Ga0181535_10852512	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300014489\|Ga0182018_10018492	All Organisms → cellular organisms → Bacteria	4656	Open in IMG/M
3300014657\|Ga0181522_10847888	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300015245\|Ga0137409_10787120	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300016702\|Ga0181511_1179361	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300016750\|Ga0181505_10699821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300016750\|Ga0181505_11002782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300017938\|Ga0187854_10468702	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300017996\|Ga0187891_1283727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300018017\|Ga0187872_10252365	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300018023\|Ga0187889_10520047	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300018026\|Ga0187857_10509571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300018037\|Ga0187883_10247437	Not Available	912	Open in IMG/M
3300018038\|Ga0187855_10113760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1628	Open in IMG/M
3300018042\|Ga0187871_10071363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2040	Open in IMG/M
3300018042\|Ga0187871_10815249	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300018043\|Ga0187887_10006785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8159	Open in IMG/M
3300018086\|Ga0187769_10472780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300018090\|Ga0187770_10034552	All Organisms → cellular organisms → Bacteria → Acidobacteria	3562	Open in IMG/M
3300018090\|Ga0187770_11075730	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300018468\|Ga0066662_11068662	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300020582\|Ga0210395_10288774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1233	Open in IMG/M
3300021181\|Ga0210388_10198147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1757	Open in IMG/M
3300021405\|Ga0210387_10834422	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300021559\|Ga0210409_10130518	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2308	Open in IMG/M
3300023088\|Ga0224555_1110882	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300023250\|Ga0224544_1011367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300025453\|Ga0208455_1039278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300025453\|Ga0208455_1113064	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300025576\|Ga0208820_1066117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300027562\|Ga0209735_1047252	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300027609\|Ga0209221_1082114	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300027660\|Ga0209736_1015172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2424	Open in IMG/M
3300027676\|Ga0209333_1147500	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300027698\|Ga0209446_1139536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300027824\|Ga0209040_10023704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3969	Open in IMG/M
3300027825\|Ga0209039_10259511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300027853\|Ga0209274_10660013	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300027854\|Ga0209517_10076511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2348	Open in IMG/M
3300028743\|Ga0302262_10053004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300028777\|Ga0302290_10033888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300029701\|Ga0222748_1093667	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300029951\|Ga0311371_12131933	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300029957\|Ga0265324_10059692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1304	Open in IMG/M
3300029987\|Ga0311334_11227795	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300029989\|Ga0311365_10006977	All Organisms → cellular organisms → Bacteria	10096	Open in IMG/M
3300029992\|Ga0302276_10063788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2118	Open in IMG/M
3300029999\|Ga0311339_10016453	All Organisms → cellular organisms → Bacteria	11241	Open in IMG/M
3300030007\|Ga0311338_10093541	All Organisms → cellular organisms → Bacteria → Acidobacteria	3766	Open in IMG/M
3300030041\|Ga0302274_10249536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300030058\|Ga0302179_10304135	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300030399\|Ga0311353_10062142	All Organisms → cellular organisms → Bacteria → Acidobacteria	3734	Open in IMG/M
3300030494\|Ga0310037_10475470	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300030503\|Ga0311370_12087160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300030617\|Ga0311356_10874386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300030617\|Ga0311356_11002946	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300030838\|Ga0311335_10225791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300030991\|Ga0073994_12197763	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300031028\|Ga0302180_10084856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1836	Open in IMG/M
3300031028\|Ga0302180_10110356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1564	Open in IMG/M
3300031057\|Ga0170834_112309589	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031231\|Ga0170824_109481181	All Organisms → cellular organisms → Bacteria → Acidobacteria	1536	Open in IMG/M
3300031247\|Ga0265340_10496494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031708\|Ga0310686_103987569	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031711\|Ga0265314_10512924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300031718\|Ga0307474_11485663	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031823\|Ga0307478_11776158	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300034195\|Ga0370501_0169935	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.26%
Aquatic	Environmental → Aquatic	28.32%
Plants	Host-Associated → Plants	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.44%
Freshwater	Environmental → Aquatic → Freshwater	28.32%
Peat	Environmental → Terrestrial → Peat	16.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.81%
Loam	Environmental → Terrestrial → Soil → Loam	10.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.31%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.77%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028777	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_3	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102700081	3300000567	Peatlands Soil	MGLEKQIAYARKILPSATWRALHSPARGPVHLILALADHFEPAIDPEDGHKRVPRSEQER
JGI12269J14319_102907971	3300001356	Peatlands Soil	MGLEKQIAYARKVLPSATWRALQSPARGPVHLIFALADHFEPAIVPEDGYQRVPRAEQE
JGI12635J15846_105764682	3300001593	Forest Soil	MGLKKQLAYARKVFPSATWRALKSPASGPGHLIFALADHFEPSIVPEDGQKHAPRSEQERRLE
Ga0062385_108207341	3300004080	Bog Forest Soil	MNLRKKIVYGRKVLPGGTRQALSAPVREPVHLIIAVADHFEPAIDLESGYKRVPR
Ga0062386_1002805772	3300004152	Bog Forest Soil	MGIEKQIAYARKVLPSATWRALQSPARGPVHLIFAMADHFEPAIVPEDGYQRVPRDE
Ga0058899_110811382	3300004631	Forest Soil	MNLRNKLVYAKKVLPGAIWAALRTAVRGGVHLILAVTDHFEPAINPLDGYKRVRRSEQERRLEWWIDRIPRV
Ga0062388_1006824991	3300004635	Bog Forest Soil	VGLGNKFAYARKVLPAATWRALQAPTRGPVHLIITLADHFEPAIVPGDGFKRVPL
Ga0066672_104314922	3300005167	Soil	MSRLQMGLKKQIVYARKILPSATWRALTSPARGPVHLIFALADHFEP
Ga0070706_1004419501	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGIENKIAYARKIVPSATWRALNSPVRGPVHLIFALADHFEPAIDPEDGQKR
Ga0070707_1003918421	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLKKIAYASKVLPRAAWRALGASPRGPLHLVIAMADHFEPAIDPESGQKRVSRSEQERRLESWSR
Ga0070761_107400441	3300005591	Soil	MGIEKQIAYARKVLPSATWRALQSSPRGPVHLIFALADHFEPAIVPEDGYRRVSRDEQERRL
Ga0070763_108255112	3300005610	Soil	MVLKTKVDYVRKILPSATWRALNSPVRGPVHLIFALADHFEPAIDPEDGQKRV
Ga0070765_1005471992	3300006176	Soil	MGLENKIAYARKVVPSATWRALKSPVPNPVHVIFALADHFEPAIDPTDGQKRVPLSEQESRLEYWT
Ga0066793_100302024	3300009029	Prmafrost Soil	MRLGKQLAYARKIMPSATWRALQSPVPGPLHLILVLADHFEPAIVPEDGQKRAPRSE
Ga0099830_102222103	3300009088	Vadose Zone Soil	MRLEKQIVYARKILPSATWRALSPPARGPVHVILALADHFEPAIDPED
Ga0066709_1000334411	3300009137	Grasslands Soil	MTLSNNIAYARKVLPAATSRALGSPVGGPVHLILAVADHFEPSINPEDGQKRVPRVEQERRLEWWR
Ga0099792_108499572	3300009143	Vadose Zone Soil	MRLLKKIAYTSKVLPSAMWRAMGASPRGPLHLVIAMADHFEPAIDPESGDKRVPRSEQERRLDSWSR
Ga0116214_11203571	3300009520	Peatlands Soil	MGLKRQLAYARKVLPSATWRALKSPVRGPVHLVFALADHFEPAI
Ga0116222_15018141	3300009521	Peatlands Soil	MGLENKIAYARKVLPSATWRALQSPVRGPVHLIFALADHFEPAIDPEDGRKRVARSEQERRLEWW
Ga0116221_14330511	3300009523	Peatlands Soil	MRLKEQLAYARKILPSATWRALNSPARGPVHLIFALADHFEPAIVPEDGQKRAPRSEQER
Ga0116133_10067394	3300009623	Peatland	MGLENKIAYAMKVLPVATRRALNSSVRGPVHLIFALADHFEPAIDPEDGQ
Ga0116113_10725901	3300009638	Peatland	MGLAQKIAYARKVLPSATLRALKSLRSGPVHVIIALADHFEPAIDPEDGQNRVPRPEQERRLEWWA
Ga0116113_11211381	3300009638	Peatland	MSLRKRANYLRKVLPGGTLRALSAPVRGHVHLLIAVADHFEPAISPEGGAKRVPRPEQERRL
Ga0116121_10905231	3300009644	Peatland	MGLENKIAYAMKVLPSATRRALAAPVRGPVHLIFAIADHFEPAIDP
Ga0116132_10608012	3300009646	Peatland	MRLKKQLAYARRILPATTWRALNPPVRGPVHLILALADHFEPSIDPEDGRKFVPRSEQERRLESWVREYP
Ga0116215_10461973	3300009672	Peatlands Soil	MGLENQLAYARKILPSATWRALNSPVRGPVHLIFALADHFEPAIDPEDG
Ga0116215_11219242	3300009672	Peatlands Soil	MGLEKQIAYARKVLPSATWRALQSPARGPVHLIFALADHFEPAIVPE
Ga0116217_103401592	3300009700	Peatlands Soil	MGLENKIAYARKVLPSATWRALQSPVRGPVHLIFALADHFEPAIDPEDG
Ga0116134_10019079	3300009764	Peatland	MGLENKIDYAKKVLPSATWRALAAPVRGPVHLIFAMADHFEPAIDPEDGQKRVPRSEQERRLEWWA
Ga0116219_105883542	3300009824	Peatlands Soil	MDLKKQLAYARKVVPSATWRALKSPVRGPVHLIFALADHFEPAIDPEDGQKRVPRSE
Ga0116219_106156631	3300009824	Peatlands Soil	MGLENKIAYAMKVLPSATWRALNSPVRGPVHLIFALADHFEPAIDP
Ga0136449_1018880171	3300010379	Peatlands Soil	MSLEKQLDYARKILPSAAWRALNSPVRGPVHLIFAMADHFEPAIDPEDGQKRVARS
Ga0137382_106033731	3300012200	Vadose Zone Soil	MSLGSILSYAGKVLPGATWRALGASPRGPVHLVIAMADHFEPAIDPAGGQKRASRSEQERRLEWWSREY
Ga0137382_109692501	3300012200	Vadose Zone Soil	MSLKSALTYASKVLPGATWRALGASPRGPVHLVIAMADHFEPAIHPEGGQLRASRSEQERRL
Ga0137362_100837281	3300012205	Vadose Zone Soil	MGFEKQLVYARKVLPSATWRALQSPARGPVHLILAIADHFEPAIDPEDGQKRVPRSEQERRL
Ga0137360_112400842	3300012361	Vadose Zone Soil	MGLKKQFAYARKVFPFATARALKSPASGPVHLIFALAD
Ga0137360_113345022	3300012361	Vadose Zone Soil	MSIEDKIVYARKIVPSATWRALNSPVRGPVHLIFALADHFEPAIDPEDGQK
Ga0137390_110071862	3300012363	Vadose Zone Soil	MSIENKIAYARKILPSATWRALNSPARGPLHLIFALADHFEPAIDP*
Ga0150984_1049249122	3300012469	Avena Fatua Rhizosphere	MSLKKKLVYASKVLPAATWRALRTAPRGHKHLIIAMADHFEPAIIPEDGMKRAPRSEQER
Ga0137359_107384011	3300012923	Vadose Zone Soil	MNFSKNIVYAAKVFPGATLRGLARPVTGTVHLILAVADHFEPAIDPEDGQKRVSRSEQERRLEWWRKEYPKA
Ga0137419_101308601	3300012925	Vadose Zone Soil	MRLTNQIAYARKVLTSATWRALNSPVRGPVHLIFALADH
Ga0137404_113316921	3300012929	Vadose Zone Soil	MRVKKQIAYARKVLPAATWRALKAPVRGPVHLIIALADHFEPGIVP
Ga0181530_101559972	3300014159	Bog	MSLENKIAYARKVLPSATWRALKSPTRGPVQVDVILALADHFEPAIDPADGQKRV
Ga0181535_108525122	3300014199	Bog	MRVQKKLAYARKILPSATWRALHSPARDPVHLILA
Ga0182018_100184925	3300014489	Palsa	MGLEKQLVYARKVLPSATWRALQSPARGPVHVIFVLADHFEPAIDPE
Ga0181522_108478881	3300014657	Bog	MGLSQQIAYARKVFPSATWRALKSPVRGPVHVILVLADHFEPAID
Ga0137409_107871202	3300015245	Vadose Zone Soil	MRLLKKIAYTSKVLPSAMWRAMGSSPRGPLQLVIAMADHFEPAIDPESGAKRVPRSEQERRLNSWS
Ga0181511_11793611	3300016702	Peatland	MRVQKKLAYARKILPSATWRALNLPARGPVHLILALADHFEPAHDPINA
Ga0181505_106998212	3300016750	Peatland	MRVKKQLAYARKILPSATWRALNLPARGPVHLILALADHFEPAHDPINARERVPRVEQERRLDSWTREYPKIV
Ga0181505_110027821	3300016750	Peatland	MRVQKKLAYARKILPSATWRALHSPARDPVHLILALADHFEPAHDPINARERAPRVEQERRLE
Ga0187854_104687021	3300017938	Peatland	MGLENKIAYAMKVLPSATWRALNSPVRGPVHLIFAMADHFEPAIDPEDGQKRVPRS
Ga0187891_12837271	3300017996	Peatland	MGLENKIAYAMKVLPSATWRALNSPVRGPVHLIFAMADHFEPAIDPEDGQKRVPRSEQERRLE
Ga0187872_102523652	3300018017	Peatland	MRLKQQLAYARKVLPSATWWALKSPARGPMHVIFALADHFEPAIVPEDGQKR
Ga0187889_105200472	3300018023	Peatland	MGLENKIAYAMKVLPSATRRALNSPVRGSVHLIFALADHFEPAIDPEDGQK
Ga0187857_105095712	3300018026	Peatland	MGLENKLDYARKVLPSATWRALAAPVRGPVHLIFAMADHFEPAIDPEDGQKRVPRSEQERRLEWWAREY
Ga0187883_102474371	3300018037	Peatland	MGLERQIAYARKVLPSATWRALQSPARGPVHLILAWADHFEPA
Ga0187855_101137601	3300018038	Peatland	MSLRKQITYGSKVLPGGTWRALGAAVREPVHLMLAMADHFEPAIDLESGYKRVAR
Ga0187862_108589652	3300018040	Peatland	MSLRKKIAYGRKVLAGATWRALSAPVREPVHLILAVADHFEPAIVPEDGQ
Ga0187871_100713631	3300018042	Peatland	MSLRKKLTYGKKVLPGTAWRALRAPVHGATHLMIAVADHFEPAIDPEDGQKRVPLAEQERRLEWWGREY
Ga0187871_108152491	3300018042	Peatland	MGLENKIAYAMKVLPSATRRALAAPVRGPVHLIFAMADHFEPAIDPEDGQKRVPRSEQ
Ga0187887_100067859	3300018043	Peatland	MSLRKKANYLRKVLPGGTLRALSAPVRGHVHLLIAVADHFEPAISPEGGAKRV
Ga0187769_104727802	3300018086	Tropical Peatland	MALKNQLAYARKVLPSAAWRALQSPVRGPVHLIFALADHFEPAIDPEDGQK
Ga0187770_100345524	3300018090	Tropical Peatland	MSLKQKIAYGGKVLPGGTWRALSPPVREPVHLIMAVADHYEPAIDPTDGQKRVPRPEQERRLDRWN
Ga0187770_110757301	3300018090	Tropical Peatland	MASKKQLDYARKVLPAAAWRALQSPARGPVHLILALADHFEPAIDPADGEKRVSRSEQERRLES
Ga0066662_110686622	3300018468	Grasslands Soil	MSIEDKIVYARKVVPSATWRALNSPVRGPVHLIFALADHFEPAIDPEDGQKRAPRSEQER
Ga0210395_102887742	3300020582	Soil	MGLENKIAYARKVVPSATWRALKSPVPNPVHVIFAL
Ga0210388_101981471	3300021181	Soil	MGLKKQLVYAKKVLPSATWRALSSPVREPVHLIIAVADHFEPAIDPEDGQKRVARSEQERRVGWW
Ga0210387_108344222	3300021405	Soil	MTVSRKLAYAKKVMPAAAWRGLQSAVRSPVHLIFALADHFEPAIDPSDGYKRVPR
Ga0210409_101305184	3300021559	Soil	MRLKGQLAYARKVLSSATWRALNPHTSGPVHLILALADHFEPSIVPDGGQQ
Ga0224555_11108822	3300023088	Soil	MNLRKKIAYGRKVLAGGTWRALSAPVREPVHLIIAVADHFEPAIVPEDGQKRVSRSEQEQRLE
Ga0224544_10113671	3300023250	Soil	MSLEKQIAYARKVLPSATWRALISPPRRPVHLILALADHFEPAIDP
Ga0208455_10392781	3300025453	Peatland	MRLKQQLAYARKVLPSATWHALKSPAQGPVHLIFALADHFEPAIVPGGGQTRAPRSEQER
Ga0208455_11130642	3300025453	Peatland	MGLKKQIAYARKVLPSATWRALKSPAHGPVHVIFALADHFEPAIDPEDGQKRVPRSEQERRLEWWA
Ga0208820_10661172	3300025576	Peatland	MRLKQQLAYARKVLPSATWHALKSPAQGPVHLIFALADHFEPAIVPG
Ga0209735_10472521	3300027562	Forest Soil	MSIENKIAYARKILPSATWRALTSPVRRPVHLIFALADHFEPSIVAEDGQKRAPRSEQER
Ga0209221_10821141	3300027609	Forest Soil	MEMGLENKIAYVGKVMPPAIWRALQSPVRRPVHVVLALADHFEPAIDPTDGHKRVSHSEQQRRLEYW
Ga0209736_10151721	3300027660	Forest Soil	MALKKQIDYARKILPSATWRALNSPVRGPVHLIFALADHFEPAIDPEDGQKRVPRSEQERRL
Ga0209333_11475001	3300027676	Forest Soil	MSLRKKITYVRKVLPAGMRRALGAPVREPVHLIVAVADHFEPAIDPEDGQKRVPRSEQERRLEWWS
Ga0209446_11395361	3300027698	Bog Forest Soil	MNLRKKIVYGRKVLPGGTRQALSAPVREPVHLIIAVADHFEPAIDLESGYKRVPRSE
Ga0209040_100237041	3300027824	Bog Forest Soil	MGLRKQLAYASKVLPSATWRSLKPPVRGPVHLIIAMADHFEPAIDPDDGQKRVSRSEQERRLEWWT
Ga0209039_102595112	3300027825	Bog Forest Soil	MNLRKKIVYGRKVLPGGTRQALSAPVREPVHLIIAVADHFEPAIDLESGYKRVPRSEQERRLEE
Ga0209274_106600132	3300027853	Soil	MGIEKQIAYARKVLPSATWRALQSSPRGPVHLIFALADHFEPAIVPEDGYRR
Ga0209517_100765113	3300027854	Peatlands Soil	MALKKQIAYARKVLPSATWRALHSAVRGPAHLIFALAD
Ga0302262_100530041	3300028743	Fen	MSFRKNKIAYVRKVLPGATWRALGASPRGPVHLILAVADHFEPAIDPESGVKRVPRV
Ga0302290_100338881	3300028777	Fen	MSFRKNKIAYVRKVLPGATWRALGASPRGPVHLILAVADHFEPAIDPESGVKRVPRVEQERRL
Ga0222748_10936672	3300029701	Soil	MSLGNKIAYGGKVLPGGIWRALRAPVREPVHLMIAVADHFEPAIDPEDGDKRVPRSEQER
Ga0311371_121319332	3300029951	Palsa	MDLKTKFAYAGKVLASASLRALTFRPEGPVHLILALADHFEPAIVPEDGLKRAPRAEQERRLE
Ga0265324_100596922	3300029957	Rhizosphere	MGLKKKLAYAGKVLPAATLSGLRSAVSGPVHLIIALADHFEPAIDPTDGHKRA
Ga0311334_112277952	3300029987	Fen	MSLRKKLVYGSKVLPGATWRALHTAPRGNVHLVIAMADHFEPAIVPEDGMKRAPRSEQE
Ga0311365_1000697710	3300029989	Fen	MSFRKNKIAYVRKVLPGATWRALGASPRGPVHLILAVADHFEPAIDPESGVKRVPRVEQERRLEW
Ga0302276_100637883	3300029992	Bog	MGLENKVAYAMKVLPSATRRGLKPAPRGPLQVILTVADHF
Ga0311339_1001645310	3300029999	Palsa	MSLEKQIAYARKVLPSATWRALMSPPRRPVHLILALADHFEPAIDPEDGQKRVPRPEQERRVESWVR
Ga0311338_100935411	3300030007	Palsa	MSLKRKFAYARKVLPAATWRGLQSSARRPVHLIFALADHFEPAIDPQD
Ga0302274_102495361	3300030041	Bog	MGLAQKIAYARKVLPSATLRALNSARTGSAHVIIALADH
Ga0302179_103041352	3300030058	Palsa	MSLKRKFAYARKVLPAATWRGLQSSARRPVHLIFALADHFEPAIDPQDGYKR
Ga0311353_100621424	3300030399	Palsa	MSLKRKLAYARKVLPAATWRGLQSSARRPVHLIFALADHFEPAIDP
Ga0310037_104754701	3300030494	Peatlands Soil	MGLEKQIAYARKILPSATWRALHSPARGPVHLILALADHFEPAIDPEDGHKR
Ga0311370_120871602	3300030503	Palsa	MGLQKTIAYARKVLPGAVLAALAAPVREPVHLMIAVADHFEPAIDPEDGQKRVPLSEQERRLEWWSREYPKA
Ga0311356_108743862	3300030617	Palsa	MDLKTKFAYAGKVLASASLRALTFRPEGPVHLILALADHFEPAIVPEDGLKRAPRAEQE
Ga0311356_110029461	3300030617	Palsa	MSLKRKFAYARKVLPAATWRGLQSSARRPVHLIFALADHFEPAIDPQDGY
Ga0311335_102257912	3300030838	Fen	MSFRKNKIAYVRKVLPGATWRALGASPRGPVHLILAVADHFEPAIDPESGVKRVPRVEQ
Ga0073994_121977631	3300030991	Soil	MALKKQIDYARKILPSATWRALNSPLRGPVHLIFALADHFEPAIDPE
Ga0302180_100848561	3300031028	Palsa	MGLQKTIAYARKVLPGAVLAALAAPVREPVHLMIAVADHFEPAIDPEDGQKRVPLS
Ga0302180_101103561	3300031028	Palsa	MDLKTKFAYAGKVLASASLRALTFRPEGPVHLILALADHFEPAIVPEDGLKRAPRAEQERRLEW
Ga0170834_1123095891	3300031057	Forest Soil	MGLKKQFAYARKVFPSATACALKSPASGPVHLIFALADHFEPAIDPTDGQKRVPHSEQERRLELWTR
Ga0170824_1094811812	3300031231	Forest Soil	MSIENKIAYARKILPSATWRALKPPVRGPVHLIFALADHFEPAIDPEDGQ
Ga0265340_104964941	3300031247	Rhizosphere	MGLKTQLAYAAKVLPSATWRALHAPPRGPVHVIFTLADHFEPAIDPEDGQKRVPRSEQERRVEWWS
Ga0265331_103742621	3300031250	Rhizosphere	MGLKKKIAYAGKVLPAATLSGLRSAVSGPVHLIIALADHFEPAIDPTD
Ga0310686_1039875691	3300031708	Soil	MGLKKQLVYAKKVLPSATWRALSSPVREPVHLIIAVADHFEPAIDPEDGQKR
Ga0265314_105129242	3300031711	Rhizosphere	MGLKTQLAYAAKVLPSATWRALHAPPRGPVHVIFTLADHFEPAIDPEDGQKRVPRSEQERRLEWWA
Ga0307474_114856632	3300031718	Hardwood Forest Soil	MNLRKKIAYARKALPGGTWRALSAPVREPVHLIMAVADHFEPAIDPEDGQKRVPRFEQER
Ga0307478_117761582	3300031823	Hardwood Forest Soil	MGLKKQLAYARKVFPSATGRALKSSVRGHVHLIFALADHFEPAI
Ga0370501_0169935_556_759	3300034195	Untreated Peat Soil	MSLGKKLVYGSKVLPGATWRALHAAPRGAVHLVIAMADHFEPAIVPEDGLKRAPRSEQEQRLEQWSRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082981

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences