Metagenome Family F082959

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082959
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	77 residues
Representative Sequence	MLAPADALPLAVERVGEPKWRQAVARSVQDRCDVPEFDKREIGRDASPPYNHSGTVVVASAWLAFYVIAAIHHFIASGN
Number of Associated Samples	97
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.45 %
% of genes near scaffold ends (potentially truncated)	38.94 %
% of genes from short scaffolds (< 2000 bps)	78.76 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.292 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.628 % of family members)
Environment Ontology (ENVO)	Unclassified (46.018 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.73% β-sheet: 0.00% Coil/Unstructured: 53.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01361	Tautomerase	4.42
PF00072	Response_reg	3.54
PF03547	Mem_trans	3.54
PF00196	GerE	2.65
PF00300	His_Phos_1	2.65
PF00106	adh_short	1.77
PF01966	HD	1.77
PF07963	N_methyl	0.88
PF13505	OMP_b-brl	0.88
PF03704	BTAD	0.88
PF13358	DDE_3	0.88
PF13551	HTH_29	0.88
PF00211	Guanylate_cyc	0.88
PF11528	DUF3224	0.88
PF07007	LprI	0.88
PF00486	Trans_reg_C	0.88
PF13586	DDE_Tnp_1_2	0.88
PF05593	RHS_repeat	0.88
PF01177	Asp_Glu_race	0.88
PF00989	PAS	0.88
PF03401	TctC	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.42
COG0679	Predicted permease, AEC (auxin efflux carrier) family	General function prediction only [R]	3.54
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.88
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.88
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.88
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.18 %
Unclassified	root	N/A	39.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.18 %
Unclassified	root	N/A	39.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.29 %
Unclassified	root	N/A	39.82 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.75 %
Unclassified	root	N/A	39.82 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.43 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	9.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.04 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.88 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.73 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	1.77 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.73 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	1.77 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.88 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.82 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	1.77 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.88 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.88 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.82 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	9.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
Bosea sp. LC85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. LC85	1.77 %
Rhizobium sullae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	0.88 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.88 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11790724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300001661\|JGI12053J15887_10015241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4264	Open in IMG/M
3300004114\|Ga0062593_100094222	Not Available	2083	Open in IMG/M
3300004156\|Ga0062589_100143415	Not Available	1623	Open in IMG/M
3300004463\|Ga0063356_100605919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium sullae	1481	Open in IMG/M
3300004479\|Ga0062595_102198085	Not Available	540	Open in IMG/M
3300004480\|Ga0062592_102219143	Not Available	547	Open in IMG/M
3300004643\|Ga0062591_100197691	Not Available	1472	Open in IMG/M
3300005093\|Ga0062594_100116534	Not Available	1648	Open in IMG/M
3300005289\|Ga0065704_10224871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M
3300005294\|Ga0065705_10218528	All Organisms → cellular organisms → Bacteria → Proteobacteria	1331	Open in IMG/M
3300005332\|Ga0066388_100151951	All Organisms → cellular organisms → Bacteria → Proteobacteria	2895	Open in IMG/M
3300005332\|Ga0066388_100299766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2252	Open in IMG/M
3300005332\|Ga0066388_100794229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1540	Open in IMG/M
3300005332\|Ga0066388_102543040	Not Available	931	Open in IMG/M
3300005353\|Ga0070669_100868812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300005455\|Ga0070663_100733474	Not Available	842	Open in IMG/M
3300005471\|Ga0070698_100085036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3151	Open in IMG/M
3300005563\|Ga0068855_100076693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3878	Open in IMG/M
3300005577\|Ga0068857_102218490	Not Available	539	Open in IMG/M
3300005719\|Ga0068861_102324757	Not Available	538	Open in IMG/M
3300005764\|Ga0066903_101025122	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300005841\|Ga0068863_101597483	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	661	Open in IMG/M
3300006176\|Ga0070765_101346843	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	673	Open in IMG/M
3300006796\|Ga0066665_11585757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300006800\|Ga0066660_11164566	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300006852\|Ga0075433_10877583	Not Available	783	Open in IMG/M
3300006853\|Ga0075420_101780084	Not Available	527	Open in IMG/M
3300007788\|Ga0099795_10190910	Not Available	860	Open in IMG/M
3300009038\|Ga0099829_10407998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. LC85	1123	Open in IMG/M
3300009089\|Ga0099828_10363428	All Organisms → cellular organisms → Bacteria → Proteobacteria	1304	Open in IMG/M
3300009090\|Ga0099827_10004117	All Organisms → cellular organisms → Bacteria → Proteobacteria	8472	Open in IMG/M
3300009090\|Ga0099827_10091896	All Organisms → cellular organisms → Bacteria → Proteobacteria	2395	Open in IMG/M
3300009090\|Ga0099827_10219936	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300009101\|Ga0105247_11389354	Not Available	568	Open in IMG/M
3300009176\|Ga0105242_12045456	Not Available	616	Open in IMG/M
3300010043\|Ga0126380_11880267	Not Available	544	Open in IMG/M
3300010047\|Ga0126382_10439207	Not Available	1031	Open in IMG/M
3300010159\|Ga0099796_10033956	All Organisms → cellular organisms → Bacteria → Proteobacteria	1682	Open in IMG/M
3300010358\|Ga0126370_12609414	Not Available	505	Open in IMG/M
3300010359\|Ga0126376_10072610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2525	Open in IMG/M
3300010359\|Ga0126376_11409070	Not Available	722	Open in IMG/M
3300010359\|Ga0126376_11654214	Not Available	674	Open in IMG/M
3300010362\|Ga0126377_10738018	Not Available	1040	Open in IMG/M
3300010362\|Ga0126377_11773171	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300010373\|Ga0134128_10561416	Not Available	1271	Open in IMG/M
3300011271\|Ga0137393_10441676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300012096\|Ga0137389_10489989	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300012189\|Ga0137388_11016772	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300012198\|Ga0137364_10015846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4487	Open in IMG/M
3300012200\|Ga0137382_10090699	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300012202\|Ga0137363_10040633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3276	Open in IMG/M
3300012203\|Ga0137399_10052571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2968	Open in IMG/M
3300012203\|Ga0137399_10653566	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300012204\|Ga0137374_10206939	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1684	Open in IMG/M
3300012206\|Ga0137380_11103370	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300012207\|Ga0137381_10425114	All Organisms → cellular organisms → Bacteria → Proteobacteria	1160	Open in IMG/M
3300012285\|Ga0137370_10007991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4927	Open in IMG/M
3300012356\|Ga0137371_10021437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4971	Open in IMG/M
3300012363\|Ga0137390_11743085	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	556	Open in IMG/M
3300012532\|Ga0137373_10595523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	834	Open in IMG/M
3300012683\|Ga0137398_10492911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	842	Open in IMG/M
3300012685\|Ga0137397_10835104	Not Available	683	Open in IMG/M
3300012922\|Ga0137394_11222452	Not Available	615	Open in IMG/M
3300012922\|Ga0137394_11341792	Not Available	577	Open in IMG/M
3300012951\|Ga0164300_10837846	Not Available	574	Open in IMG/M
3300013306\|Ga0163162_10832094	Not Available	1039	Open in IMG/M
3300013308\|Ga0157375_11356290	Not Available	837	Open in IMG/M
3300014325\|Ga0163163_10147933	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2393	Open in IMG/M
3300014325\|Ga0163163_12828910	Not Available	541	Open in IMG/M
3300015201\|Ga0173478_10295351	Not Available	731	Open in IMG/M
3300015264\|Ga0137403_10848023	Not Available	766	Open in IMG/M
3300016294\|Ga0182041_10004048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7778	Open in IMG/M
3300019356\|Ga0173481_10274069	Not Available	771	Open in IMG/M
3300020140\|Ga0179590_1115504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300021168\|Ga0210406_10768483	Not Available	736	Open in IMG/M
3300021363\|Ga0193699_10025348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2189	Open in IMG/M
3300021363\|Ga0193699_10060438	Not Available	1481	Open in IMG/M
3300022694\|Ga0222623_10235761	Not Available	707	Open in IMG/M
3300023069\|Ga0247751_1072959	Not Available	597	Open in IMG/M
3300024288\|Ga0179589_10143944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1012	Open in IMG/M
3300025914\|Ga0207671_10011349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7258	Open in IMG/M
3300025920\|Ga0207649_10042281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2779	Open in IMG/M
3300026304\|Ga0209240_1008287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3925	Open in IMG/M
3300026320\|Ga0209131_1024922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3554	Open in IMG/M
3300026320\|Ga0209131_1077498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1800	Open in IMG/M
3300026351\|Ga0257170_1029530	Not Available	738	Open in IMG/M
3300026557\|Ga0179587_10798766	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	622	Open in IMG/M
3300027480\|Ga0208993_1110705	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	501	Open in IMG/M
3300027512\|Ga0209179_1133557	Not Available	555	Open in IMG/M
3300027663\|Ga0208990_1114152	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300027875\|Ga0209283_10241727	All Organisms → cellular organisms → Bacteria → Proteobacteria	1197	Open in IMG/M
3300027882\|Ga0209590_10485948	Not Available	798	Open in IMG/M
3300027882\|Ga0209590_10725617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300027882\|Ga0209590_10743717	Not Available	626	Open in IMG/M
3300027903\|Ga0209488_10105922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2110	Open in IMG/M
3300028536\|Ga0137415_10614754	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	898	Open in IMG/M
3300028536\|Ga0137415_10616928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. LC85	896	Open in IMG/M
3300028720\|Ga0307317_10018316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2129	Open in IMG/M
3300028755\|Ga0307316_10023528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1981	Open in IMG/M
3300028784\|Ga0307282_10587326	Not Available	540	Open in IMG/M
3300028819\|Ga0307296_10343203	Not Available	815	Open in IMG/M
3300028906\|Ga0308309_10939869	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	750	Open in IMG/M
3300029910\|Ga0311369_11295290	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	557	Open in IMG/M
3300030007\|Ga0311338_10924355	Not Available	855	Open in IMG/M
3300030503\|Ga0311370_10669501	Not Available	1226	Open in IMG/M
3300031236\|Ga0302324_103499322	Not Available	509	Open in IMG/M
3300031544\|Ga0318534_10290851	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	941	Open in IMG/M
3300031545\|Ga0318541_10002921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6803	Open in IMG/M
3300031798\|Ga0318523_10139389	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1203	Open in IMG/M
3300031845\|Ga0318511_10602591	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	512	Open in IMG/M
3300032009\|Ga0318563_10228045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300032051\|Ga0318532_10218701	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.07%
Host-Associated	Host-Associated	15.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Plants	Host-Associated → Plants	15.93%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.19%
Peat	Environmental → Terrestrial → Peat	3.54%
Roots	Host-Associated → Plants → Roots	1.77%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.91%
Loam	Environmental → Terrestrial → Soil → Loam	9.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_117907241	3300000787	Soil	MLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIH
JGI12053J15887_100152413	3300001661	Forest Soil	MLAPADALPLAVERAGEARWRQAVARSVQDRCDVSGSDKREIVRDASPPYNHRGTVVVASVWLAFYVIAAIHEFIASGN*
Ga0062593_1000942225	3300004114	Soil	SDDAAAAAGCLHRASPILEVAMLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0062589_1001434154	3300004156	Soil	MLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0063356_1006059192	3300004463	Arabidopsis Thaliana Rhizosphere	MLAPADALPLVVERAAEPQWRQTVARSAQDRCDVAEFAKCEIGRDAYPLINTGVGIGPVVVASAWLAFYVIAAIHNFIAS*
Ga0062595_1021980852	3300004479	Soil	MPDAADALPLTVERAEPPWRRAVERSVQDHCDVSDKPEIGRDAFSPYDHSGAVVVASAWLVFYVIAAIHHFIAS*
Ga0062592_1022191431	3300004480	Soil	ASPILEVAMLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0062591_1001976911	3300004643	Soil	DAAAAAGCLHRASPILEVAMLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0062594_1001165345	3300005093	Soil	PANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0065704_102248711	3300005289	Switchgrass Rhizosphere	MLAPADALPRAVERAGEPQWRQTVARSVQDRCDVSEFDKCEIGRDAYPPYNHRGTVVVASAWLAFCIIAAV
Ga0065705_102185281	3300005294	Switchgrass Rhizosphere	MLAPADALPRAVERAGEPQWRQTVGRSVQDRCDVSEFDKCEIGRDAYPPYNHRGTVVVASAWLAFCIIAAI
Ga0066388_1001519514	3300005332	Tropical Forest Soil	MTRHCRRLPNIARRGFLEIVMQGHADALPQALERAGEPRCGVSEFDRREIGRDTSQPYNHRGTIVVASAWLVFYVIVAIHEWIISTR*
Ga0066388_1002997663	3300005332	Tropical Forest Soil	MQGHADALPQALEHAGELRWRPAPARSAQDRCGVSDFDRREVGRDTSPPYNHKGTVVVASAWLAFYVIAAIHKWIISMH*
Ga0066388_1007942292	3300005332	Tropical Forest Soil	MTALIAAVPLTLERASEPQRRQAVARSVQDRCDVSEFDKCDIGREAYPPHNHRATGVVAAAWLAFYLIIVIHHLAAAGG*
Ga0066388_1025430401	3300005332	Tropical Forest Soil	MPAHADALPQALERASEPRWRQAAARSARDRCDGAEFDKREIGRDASPPYDHWGTVVVASAWLAFYVIAAIHAWIVSTH*
Ga0070669_1008688121	3300005353	Switchgrass Rhizosphere	MLLVKPRRSDEAAAVDCLTSRTLPILEVVMLAPADALPRAVERAGEPQWRQTVARSVQDRCDVSEFDKCEIGRDAYPPYNHRGTVVVASAWL
Ga0070663_1007334741	3300005455	Corn Rhizosphere	MLAPADALPLAVERAGEPQWRRAVARSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0070698_1000850363	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQAHVDAVPLAVARSVQDRCDVTEFDKREIGRDASAPYNHSGTVVVASAWLAFYVIAAFHAFIASGY*
Ga0068855_1000766931	3300005563	Corn Rhizosphere	VLAPADALPLAVERAGEPRWRQAVARPVQNRCDVAESDKPDIRRDAFPPYDHRATVVVASAWLAFYVIAAIHPFMASGN*
Ga0068857_1022184901	3300005577	Corn Rhizosphere	ALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0068861_1023247571	3300005719	Switchgrass Rhizosphere	MLAPADALPLAVERAGEPQWRRAVARSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYV
Ga0066903_1010251222	3300005764	Tropical Forest Soil	MQGHADAPPHALEPAGRPRWRQAAARSAQDRYGVSDFDRREIGRDTSPPYNHKETVVVASAWLAFYVIA
Ga0068863_1015974831	3300005841	Switchgrass Rhizosphere	MLLVKPRRSDEAAAVDCLTSRTLPILEVVMLAPADALPRAVERAGEPQWRRAVARSVQDRCDVSEFDKCEIGRDAYPPYNHRGTVVVASAWL
Ga0070765_1013468431	3300006176	Soil	MRVRADASPLAVELVGEPRWRQTIARSIQHRCGVPESDRCQAGRDASPPYDHRGVVVVASAWLAFYIIAATI
Ga0066665_115857571	3300006796	Soil	MLVPAEALPLALERAGEPQRRQALARSVDDRCDVAESDRRETGRDASPPYNHSGTVVVASAWLAFYVIAAIHAFIASGY*
Ga0066660_111645662	3300006800	Soil	VMLAAADALPRAVERAGEPQWRQAVARSVQDRCDVAEFAKCEIGRDAYPLINSGIGIGPAVVASAWLAFYVIAAIHDFIAS*
Ga0075433_108775832	3300006852	Populus Rhizosphere	SSVRDAAAAAGCLHRASPILEVAMLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLSNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0075420_1017800842	3300006853	Populus Rhizosphere	AMLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0099795_101909101	3300007788	Vadose Zone Soil	MLDAADALPLAVERAEPPWRQAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS*
Ga0099829_104079981	3300009038	Vadose Zone Soil	MLAPADALPQAMERASEPQWRQAGARAVQGRCDVSESDQRDIGQSASPPYDHSGIVVVASAWLAFYVIAAIHTFIASGY*
Ga0099828_103634284	3300009089	Vadose Zone Soil	MLAPADALPLAVERAGEPQWRQAVARSAQDRCDVSEFDKCEIGRDAYPPINRGIGIGPAAVASAWLAFYVIAAIHDFIAS*
Ga0099827_100041174	3300009090	Vadose Zone Soil	MLAPADALPLAVERVGEPKWRQAVARSVQDRCDVPEFDKREIGRDASPPYNHSGTVVVASAWLAFYVIAAIHHFIASGN*
Ga0099827_100918961	3300009090	Vadose Zone Soil	MLAAADALPLAVARAGEPQWRQAVARSVQDRCDAREFDKCEIGRDAYPPINRGVGIGPAVVASAWLAFYVIAAIHDFIAS*
Ga0099827_102199361	3300009090	Vadose Zone Soil	LEVVMLASLDALPLAVERAGEPQWRQAVAPSVQDRRDVSEFDKREIGPEASPPYNHSGTVVVASAWLAFYVIAAIHHFIASGN*
Ga0105247_113893542	3300009101	Switchgrass Rhizosphere	LAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0105242_120454561	3300009176	Miscanthus Rhizosphere	MLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLA
Ga0126380_118802671	3300010043	Tropical Forest Soil	MQGHADALPQALEHAGEPRWRQAAARSARDRCDGAEFDKREIGRDASPPYDHCGTVVVASAWLAFYVIAAIHAWIVSTH*
Ga0126382_104392072	3300010047	Tropical Forest Soil	MQGHADALPQALEHAGELRWRLAPARSAQDRCGVSDFDRREIGRDTSPPYNHKGTFVVASAWLAFYVLAAIHEWIISTH*
Ga0099796_100339562	3300010159	Vadose Zone Soil	MLAPADALPQAMERAGEPQWRQAAPRSVQDRCDVSESDQRDVGQSASPPYDHSGIVVVASAWLAFYVIAAIHTFIASGN*
Ga0126370_126094141	3300010358	Tropical Forest Soil	MQGHADALPQALERAGEPRCGVSEFDRREIGRDISPPYSHKGTVVVASAWLAFYVIAAIHEWIISMH*
Ga0126376_100726102	3300010359	Tropical Forest Soil	MQGHADALPQALERAGEPRCGVSEFDRREIGRDTSQPYNHRGTIVVASAWLVFYVIVAIHEWIISTR*
Ga0126376_114090701	3300010359	Tropical Forest Soil	MQGHADALPQTLERAGELRWRQAAARSAQDRCRVSDFDRREIGRDTSPPYNHKGTFVVASAWLAFYVLAAIHEWIISTH*
Ga0126376_116542141	3300010359	Tropical Forest Soil	MQGHADAPPHALEPAGRPRWRQAAARSAQDRYGVSDFDRREIGRDTSPPYNHKGTVVVASAWLAFYVIAAIHKWIISMH*
Ga0126377_107380182	3300010362	Tropical Forest Soil	MQGHADALPQALEHAGELRWRLAPARSAQDRCGVSDFDRREVGRDTSPPYNHNGTVVVASAWLAFYVIAAIHKWIISMH*
Ga0126377_117731711	3300010362	Tropical Forest Soil	MQGHADALPQTLERAGELRWRQAAARSAQDRCGVSDFHRREIGQDTSPPYNHKGTFVVASAWLAFYVIA
Ga0134128_105614163	3300010373	Terrestrial Soil	AAAAGCLHRASPILEVAMLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0137393_104416763	3300011271	Vadose Zone Soil	MLQHADALPLAVERAVEPPTGGTRSVQGRCDVSESDQRDIGRDASPPYDHSGIVVVASAWLAFYVIAAIHTFIASGN*
Ga0137389_104899892	3300012096	Vadose Zone Soil	MLAAADALPLAVERAGEPQWRRAVARSVQACDVSEFDKPEIGRDAYPPNNGGVGIGPAVVASGWLAFYVIAAIHDFIAS*
Ga0137388_110167721	3300012189	Vadose Zone Soil	VVMLAPADVLPPAVDRAGEPRWRQAVVRSFQDRCDVSEFDKREIGRDASPPYNHRGTVVVASAWLAFYVIAAIHDFIAS*
Ga0137364_100158464	3300012198	Vadose Zone Soil	MKARADAPPLAVKRAGEPRWRQAIARSVQDRCDVSEFDSCEVGQDDNPPYDHRGVLVVASAWLAFYIIAATIASGN*
Ga0137382_100906996	3300012200	Vadose Zone Soil	MKARADAPPLAVKRAGEPRWRQAIARSVQDRCDVSEFDSCEVGQDDNPPYDHRGVIVVASAWLAFYIIAATIASGN*
Ga0137363_100406334	3300012202	Vadose Zone Soil	MLDAADALPLAVERAEPSLRRAVERSVQDHCDVSDKLEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS*
Ga0137399_100525714	3300012203	Vadose Zone Soil	MLDAADALPLAVERVEPPWRQAVERSVRDHCDVSDKPEIGQDVFSPNNHRGTVVVASAWLVFYVIAAIHHFIAS*
Ga0137399_106535661	3300012203	Vadose Zone Soil	RASPILEVVMLAPADAPLLAVERAGEARWRQAVARSVQDRVQDRCDVSESDQRDVGQSASPPYDHSGIVVVASAWLAFYVIAAIHDFIASSY*
Ga0137374_102069393	3300012204	Vadose Zone Soil	MLAPVQRVGEPQAVARSVQDRCDVSEFDKPEIGRDAFPPYNHKGTVIMASAWLAFYVIAAIHHVIASGI*
Ga0137380_111033702	3300012206	Vadose Zone Soil	VVMLAAADALPLAVERAGEPQWQQAVARSVQDRCDAREFDKCEIGRDAYPPINGGVGIGPAVVASAWLAFYVIAAIHDFIAS*
Ga0137381_104251143	3300012207	Vadose Zone Soil	MLAPADALPQAMERAGEPQWRQAAPRSVQDRCDVSASDQRDIGQSASPPYNHSGIVVVASAWLAFYVVAAIHTFIASGN*
Ga0137370_100079915	3300012285	Vadose Zone Soil	MKARADTPPLAVKRAGEPRWRQAIARSVQDRCDVSEFDSCEVGQDDNPPYDHRGVLVVASAWLAFYIIAATIASGN*
Ga0137371_100214374	3300012356	Vadose Zone Soil	MKARADTPPLAVKRAGEPRWRQAIARSVQDRCDVSEFDSCEVGQDDNPPYDHRGVIVVASAWLAFYIIAATIASGN*
Ga0137390_117430852	3300012363	Vadose Zone Soil	MLAPVDAPPLALERVGETRWRQAVARSVQDRCDVPEFDKPEIGRDAYPPRDHGRGGIGPAVVASAWLAFYVIAAIHDFIAS*
Ga0137373_105955231	3300012532	Vadose Zone Soil	SPILEVVILAHVERAGEPQWRQAATRSVQDRCDISEFDKPEIGRDAYPPYDHRGTVVVASAWLAFCVIAAIHYFTASGN*
Ga0137398_104929112	3300012683	Vadose Zone Soil	MLDAADALPLAVERAEPSWRRAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS*
Ga0137397_108351041	3300012685	Vadose Zone Soil	MLAAADALPLAVERAGEPQWRQAVARSAQDRCDVAEFAKCEVGRDAYPLINSGIGIGPAVVASAWLAFYVIAAIHNFIASGN*
Ga0137394_112224521	3300012922	Vadose Zone Soil	YMSKLAAQALARSVPDRGDVAEFEKPEIGRDAFPPCNHGATVVAASAWLAFYVIAALHNFLAPGN*
Ga0137394_113417921	3300012922	Vadose Zone Soil	MLDAADALPLAVERAEPPWRQAVERSVQDHCDISDKPEIGRDAFSPYNHRGTVVVASAWLLFYVIAAIHHFIAS*
Ga0164300_108378462	3300012951	Soil	ADALPLAVERAEPPWRQAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS*
Ga0163162_108320941	3300013306	Switchgrass Rhizosphere	MLASANAVAPAVERARESPRRRAVARSVQDRCDVSEFDKPKIGRGAFSSYNHRGTVVVAIAWLAFYAIAAIHHCLASGN*
Ga0157375_113562901	3300013308	Miscanthus Rhizosphere	MLASANAVAPAVERARELPRRRAVARSVQDRCDVSEFDKPKIGRGAFSSYNHRGTVVVAIAWLAFYAIAAIHHRLASGN*
Ga0163163_101479336	3300014325	Switchgrass Rhizosphere	VERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0163163_128289102	3300014325	Switchgrass Rhizosphere	MLASANAVAPAVERARESPRRRTVARSVQDRCDVSEFDKPKIGRGAFSSYNHRGTVVVAIAWLAFYAIAAIHHRLASGN*
Ga0173478_102953511	3300015201	Soil	MLAPADALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN*
Ga0137403_108480232	3300015264	Vadose Zone Soil	MLAPADALPLAVERAGEPRWRQAAARAVQDRCDVSESDQRDIGQSASPPYDHSGMVVVASAWLAFYVIAAIHGFIASGY*
Ga0182041_100040485	3300016294	Soil	MEARSDAPPLAVKRAGEPGWQAIARSVQDRCDVPRFDKCEVGRDANPPYDHRGVVVVASAWLAFYIIVATIASGN
Ga0173481_102740691	3300019356	Soil	ILEVAMLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN
Ga0179590_11155041	3300020140	Vadose Zone Soil	MLDVADALPLAVERAEPSWRRAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS
Ga0210406_107684831	3300021168	Soil	MLDAADALPLAVERAEPPWRQAVERPVQDHCDISDKPEIGRDAFSPYNHRGTVVVASSWLVFYVIAAIHHFLAS
Ga0193699_100253481	3300021363	Soil	LTVERAGEPQWPQAVTRSVQDHCDVSEFDKSEIGRDAFAPYNHRGTVVMASAWLAFYVFAALHHFIAAGN
Ga0193699_100604383	3300021363	Soil	MLDAADALPLAVERAEPSWRRAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS
Ga0222623_102357612	3300022694	Groundwater Sediment	MLAPTDALPLTVERAGEPQWPQAVTRSLQDHCDVSEFDKSEIGRDAFAPYNYRGAVVMASAWLAFYVFAALHHFIAAGN
Ga0247751_10729591	3300023069	Soil	MLAPANALPLAVERAGEPPWQERSVQDRCDVSEFNTREIGRAAAPLYNHSGTVVVASAWLAFYVVAAIHEFLAFGN
Ga0179589_101439443	3300024288	Vadose Zone Soil	MLDVADALPLAVERAEPPWRQAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS
Ga0207671_100113497	3300025914	Corn Rhizosphere	VLAPADALPLAVERAGEPRWRQAVARPVQNRCDVAESDKPDIRRDAFPPYDHRATVVVASAWLAFYVIAAIHPFMASGN
Ga0207649_100422811	3300025920	Corn Rhizosphere	VLAPADALPLAVERAGEPRWRQAVARPVQNRCDVAESDKPDIRRDAFPPYDHRATVVVASAWLAFYVIAAIHPFMA
Ga0209240_10082874	3300026304	Grasslands Soil	MLDAADALPLAVERAEPSWRRAVERSVQDHCDVSDKPEIGRDAFSPYNHDAFSPYNHRGTVVVASAWLVFYVIAAIHHFMAS
Ga0209131_10249223	3300026320	Grasslands Soil	MLDAADALPLAVERAEPSWRRAVERSVQDHCDVSDKPEIGRDAFSPYNHDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS
Ga0209131_10774981	3300026320	Grasslands Soil	MLDVADALPLAVERAEPPWRQAVERSVQDHCDVSDKSEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIH
Ga0257170_10295301	3300026351	Soil	MLEAADALPLAVERAEPSWRRAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS
Ga0179587_107987661	3300026557	Vadose Zone Soil	LAVERAVEPQWRQAVARSIQDRCDVSEFDKGRDAFPPYNHRGTVVVASAWLAFYVIAAIHPFIASGN
Ga0208993_11107051	3300027480	Forest Soil	MLAPADALPLAVERAGEARWRQAVARSVQDRCDVSGSDKREIVRDASPPYNHRGTVVVASVWLAFYVIAAIHEFIASGN
Ga0209179_11335571	3300027512	Vadose Zone Soil	MLEAADALPLAVERDEPSWRRAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS
Ga0208990_11141522	3300027663	Forest Soil	ALPLAVERAGEARWRQAVARSVQDRCDVSESDKREIVRDASPPYNHRGTVVVASVWLAFYVIAAIHEFIASGN
Ga0209283_102417274	3300027875	Vadose Zone Soil	MLAAADALPLAVERAGEPQWRQAVARSAQDRCDVSEFDKCEIGRDAYPPINRGIGIGPAAVASAWLAFYIIAATHAFIASGY
Ga0209590_104859481	3300027882	Vadose Zone Soil	MLAPADALPLAVERVGEPKWRQAVARSVQDRCDVPEFDKREIGRDASPPYNHSGTVVVASAWLAFYVIAAIHHFIASQQ
Ga0209590_107256171	3300027882	Vadose Zone Soil	MLASLDALPLAVERAGEPQWRQAVAPSVQDRRDVSEFDKREIGPEASPPYNHSGTVVVASAWLAFYVIAAIHHFIASGN
Ga0209590_107437171	3300027882	Vadose Zone Soil	MLAAADALPLAVERAGEPQWQQAVARSVQDRCDAREFDKCEIGRDAYPPINRGVGIGPAVVASAWLAFYVIAAIHDFIAS
Ga0209488_101059224	3300027903	Vadose Zone Soil	MLDAADALPLAVERAEPPWRQAVERSVQDHCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVIAAIHHFIAS
Ga0137415_106147541	3300028536	Vadose Zone Soil	MLDVADALPLAVERAKPPWRQAVERPSVQDLCDVSDKPEIGRDAFSPYNHRGTVVVASAWLVFYVVAAIHHFIAS
Ga0137415_106169282	3300028536	Vadose Zone Soil	MLAPADALPQAMERAGEPQWRQAAPRSVQDRCDVSESDQRDVGQSASPPYDHSGIVVVASAWLAFYVIAAIHTFIA
Ga0307317_100183165	3300028720	Soil	MLAPADALPLTVERAGEPQWPQAVTRSVQDHCDVSEFDKSEIGRDAFAPYNYRGAVVMASAWLAFYVFAALHHFIAAGN
Ga0307316_100235284	3300028755	Soil	MLAPADALPLTVERAGEPQWPQAVTRSLQDHCDVSEFDKSEIGRDAFAPYNYRGAVVMASAWLAFYVFAALHHFIAR
Ga0307282_105873262	3300028784	Soil	DALPLTVERAGEPQWPQAVTRSLQDHCDVSEFDKSEIGRDAFAPYNYRGAVVMASAWLAFYVFAALHHFIAAGN
Ga0307296_103432032	3300028819	Soil	MLAPADALPLTVERAGEPQWPQAVTRSLQDHCDVSEFDKSEIGRDAFAPYNYRGAVVMASAWLAFYVFAALHHFIAAGN
Ga0308309_109398691	3300028906	Soil	MRVRADASPLAVELVGEPRWRQTIARSIQHRCGVPESDRCQAGRDASPPYDHRGVVVVASAWLAFYIIAA
Ga0311369_112952901	3300029910	Palsa	MRVRADAPPLAVELAGEPRWRQTIARSVQDRRGVPESDRCQAGRDANPPYDHRGVVVVASAWLAFYIIAATIASGS
Ga0311338_109243552	3300030007	Palsa	MKVRADAPPPAAELAREPRSRQTIVKPVQGRRDVSAVDKCQVGRDSDPPYDHRGVVVVASAWLAFYIIAATIAFGS
Ga0311370_106695012	3300030503	Palsa	MEVRADASPPAAEPAREPRSRQTIVKPVQGRRRDVSEFDKCQVGRDSNPPYDHRGVVVVASAWLAFYIIAATIAFGS
Ga0302324_1034993221	3300031236	Palsa	MEVRADASPPAAEPAREPRSRQTTVKPVQGRRRDVSEFDKCQVGRDSNPPYDHRGVVVVASAWLAFYIIAATIAFGS
Ga0318534_102908511	3300031544	Soil	SLILEVIMEARSDAPPLAVKRAGEPGWQAIARSVQDRCDVPRFDKCEVGRDANPPYDHRGVVVVASAWLAFYIIAATIASGN
Ga0318541_100029217	3300031545	Soil	MEARSDAPPLAVKRAGEPGWQAIARSVQDRCDVPRFDKCEVGRDANPPYDHRGVVVVASAWLAFYIIAATIASGN
Ga0318523_101393893	3300031798	Soil	LRASPILEVIMEARSDAPPLAVKRAGEPGWQAIARSVQDRCDVPRFDKCEVGRDANPPYDHRGVVVVASAWLAFYIIAATIASGN
Ga0318511_106025911	3300031845	Soil	IMEARSDAPPLAVKRAGEPGWQAIARSVQDRCDVPRFDKCEVGRDANPPYDHRGVVVVASAWLAFYIIAATIASGN
Ga0318563_102280453	3300032009	Soil	MEARSDAPPLAVKRAGEPGWQAIARSVQDRCDVPRFDKCEVGRDANPPYDHRGVVVVASAWLAFYIIAATIA
Ga0318532_102187012	3300032051	Soil	ILEVIMEARSDAPPLAVKRAGEPGWQAIARSVQDRCDVPRFDKCEVGRDANPPYDHRGVVVVASAWLAFYIIAATIASGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082959

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences