Metagenome / Metatranscriptome Family F082954

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082954
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	61 residues
Representative Sequence	MIDYGRLERGLSGVAPSAKAQPDEDQLTAYTLENARLKKVIDVQKIEIKRLMRLLGIGLQLK
Number of Associated Samples	84
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.73 %
% of genes near scaffold ends (potentially truncated)	28.32 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.407 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (17.699 % of family members)
Environment Ontology (ENVO)	Unclassified (35.398 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.142 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.22% β-sheet: 0.00% Coil/Unstructured: 47.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13378	MR_MLE_C	17.70
PF07676	PD40	3.54
PF00903	Glyoxalase	3.54
PF00691	OmpA	2.65
PF13632	Glyco_trans_2_3	1.77
PF07638	Sigma70_ECF	1.77
PF00756	Esterase	0.88
PF00196	GerE	0.88
PF00857	Isochorismatase	0.88
PF00293	NUDIX	0.88
PF01979	Amidohydro_1	0.88
PF08388	GIIM	0.88
PF12680	SnoaL_2	0.88
PF12704	MacB_PCD	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.77
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.88
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
All Organisms	root	All Organisms	41.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
cellular organisms	root	All Organisms → cellular organisms	41.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.54 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	3.54 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	29.20 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	3.54 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.65 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	19.47 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.08 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	3.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.65 %
Candidatus Dependentiae	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	19.47 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.08 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	3.54 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.65 %
unclassified Candidatus Dependentiae	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	19.47 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	3.54 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.65 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.88 %
Candidatus Dependentiae bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	19.47 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	3.54 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	2.65 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.88 %
Candidatus Dependentiae bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	19.47 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	3.54 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2.65 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.88 %
Candidatus Dependentiae bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.41 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	19.47 %
Spirochaetes bacterium GWB1_59_5	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	3.54 %
Anaeromyxobacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	2.65 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.88 %
Candidatus Dependentiae bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10051604	Not Available	939	Open in IMG/M
3300001593\|JGI12635J15846_10195093	Not Available	1344	Open in IMG/M
3300001593\|JGI12635J15846_10880231	Not Available	512	Open in IMG/M
3300001867\|JGI12627J18819_10188859	Not Available	833	Open in IMG/M
3300002245\|JGIcombinedJ26739_100276246	Not Available	1566	Open in IMG/M
3300002245\|JGIcombinedJ26739_100702133	Not Available	890	Open in IMG/M
3300004080\|Ga0062385_10631307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	681	Open in IMG/M
3300004080\|Ga0062385_10858207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	599	Open in IMG/M
3300004091\|Ga0062387_100673727	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300004091\|Ga0062387_100934758	Not Available	659	Open in IMG/M
3300004091\|Ga0062387_101489019	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	542	Open in IMG/M
3300004092\|Ga0062389_101653675	Not Available	822	Open in IMG/M
3300004121\|Ga0058882_1484376	Not Available	781	Open in IMG/M
3300004152\|Ga0062386_100781231	Not Available	786	Open in IMG/M
3300004635\|Ga0062388_101252910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	737	Open in IMG/M
3300004635\|Ga0062388_102077674	Not Available	589	Open in IMG/M
3300005537\|Ga0070730_10004435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12324	Open in IMG/M
3300005541\|Ga0070733_10484128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	827	Open in IMG/M
3300005591\|Ga0070761_10829660	Not Available	583	Open in IMG/M
3300005602\|Ga0070762_10425664	Not Available	859	Open in IMG/M
3300005602\|Ga0070762_11069406	Not Available	555	Open in IMG/M
3300005712\|Ga0070764_10484457	Not Available	742	Open in IMG/M
3300005921\|Ga0070766_10521554	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006176\|Ga0070765_101506082	Not Available	633	Open in IMG/M
3300006893\|Ga0073928_10427724	Not Available	963	Open in IMG/M
3300007819\|Ga0104322_142765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2879	Open in IMG/M
3300009628\|Ga0116125_1123747	Not Available	704	Open in IMG/M
3300009665\|Ga0116135_1055878	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	1377	Open in IMG/M
3300009665\|Ga0116135_1086045	Not Available	1124	Open in IMG/M
3300010866\|Ga0126344_1215535	Not Available	518	Open in IMG/M
3300010866\|Ga0126344_1336054	Not Available	543	Open in IMG/M
3300011120\|Ga0150983_12761937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	502	Open in IMG/M
3300011269\|Ga0137392_11062635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	664	Open in IMG/M
3300011270\|Ga0137391_10317210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1343	Open in IMG/M
3300012359\|Ga0137385_10860450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	751	Open in IMG/M
3300012683\|Ga0137398_10142655	Not Available	1548	Open in IMG/M
3300012683\|Ga0137398_10242512	Not Available	1199	Open in IMG/M
3300012917\|Ga0137395_10549127	Not Available	834	Open in IMG/M
3300012924\|Ga0137413_10325402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1082	Open in IMG/M
3300012925\|Ga0137419_10534570	Not Available	935	Open in IMG/M
3300012927\|Ga0137416_11754506	Not Available	567	Open in IMG/M
3300012929\|Ga0137404_10910526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	802	Open in IMG/M
3300014489\|Ga0182018_10261769	Not Available	949	Open in IMG/M
3300014495\|Ga0182015_10021847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5196	Open in IMG/M
3300014495\|Ga0182015_10130969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1717	Open in IMG/M
3300014495\|Ga0182015_11022345	Not Available	511	Open in IMG/M
3300014501\|Ga0182024_10025301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10491	Open in IMG/M
3300015241\|Ga0137418_10412538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1099	Open in IMG/M
3300020199\|Ga0179592_10200626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	904	Open in IMG/M
3300020582\|Ga0210395_11399001	Not Available	510	Open in IMG/M
3300020583\|Ga0210401_10229122	Not Available	1717	Open in IMG/M
3300020583\|Ga0210401_10239825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium	1672	Open in IMG/M
3300021086\|Ga0179596_10376902	Not Available	714	Open in IMG/M
3300021168\|Ga0210406_10310807	Not Available	1280	Open in IMG/M
3300021180\|Ga0210396_10168748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1962	Open in IMG/M
3300021180\|Ga0210396_11768548	Not Available	500	Open in IMG/M
3300021181\|Ga0210388_10954781	Not Available	737	Open in IMG/M
3300021401\|Ga0210393_10480775	Not Available	1014	Open in IMG/M
3300021402\|Ga0210385_10476447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300021405\|Ga0210387_10322216	Not Available	1362	Open in IMG/M
3300021406\|Ga0210386_10749679	Not Available	840	Open in IMG/M
3300021407\|Ga0210383_11012790	Not Available	704	Open in IMG/M
3300024288\|Ga0179589_10133479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1046	Open in IMG/M
3300027002\|Ga0209110_1015683	Not Available	877	Open in IMG/M
3300027505\|Ga0209218_1049708	Not Available	845	Open in IMG/M
3300027559\|Ga0209222_1039339	Not Available	911	Open in IMG/M
3300027609\|Ga0209221_1183692	Not Available	508	Open in IMG/M
3300027652\|Ga0209007_1097790	Not Available	737	Open in IMG/M
3300027857\|Ga0209166_10369883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	747	Open in IMG/M
3300027867\|Ga0209167_10784600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	519	Open in IMG/M
3300027879\|Ga0209169_10138251	Not Available	1267	Open in IMG/M
3300027895\|Ga0209624_10099052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1902	Open in IMG/M
3300027895\|Ga0209624_10413948	Not Available	899	Open in IMG/M
3300027895\|Ga0209624_10833446	Not Available	604	Open in IMG/M
3300027908\|Ga0209006_10059288	Not Available	3425	Open in IMG/M
3300027908\|Ga0209006_10260806	Not Available	1489	Open in IMG/M
3300028798\|Ga0302222_10134819	Not Available	976	Open in IMG/M
3300028798\|Ga0302222_10303255	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	623	Open in IMG/M
3300028906\|Ga0308309_11047255	Not Available	706	Open in IMG/M
3300029882\|Ga0311368_10195836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1606	Open in IMG/M
3300029943\|Ga0311340_11010165	Not Available	683	Open in IMG/M
3300029943\|Ga0311340_11021156	Not Available	678	Open in IMG/M
3300029944\|Ga0311352_10628607	Not Available	855	Open in IMG/M
3300029944\|Ga0311352_11451408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	514	Open in IMG/M
3300029951\|Ga0311371_10295450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2290	Open in IMG/M
3300029999\|Ga0311339_10241695	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300030007\|Ga0311338_10177211	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300030007\|Ga0311338_11681754	Not Available	577	Open in IMG/M
3300030043\|Ga0302306_10315281	Not Available	599	Open in IMG/M
3300030399\|Ga0311353_10054109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4056	Open in IMG/M
3300030399\|Ga0311353_10307207	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300030399\|Ga0311353_11535822	Not Available	539	Open in IMG/M
3300030503\|Ga0311370_11943422	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	591	Open in IMG/M
3300030524\|Ga0311357_10757417	Not Available	876	Open in IMG/M
3300030524\|Ga0311357_10759448	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium GWB1_59_5	875	Open in IMG/M
3300030580\|Ga0311355_11258054	Not Available	650	Open in IMG/M
3300030618\|Ga0311354_10177369	Not Available	2299	Open in IMG/M
3300030730\|Ga0307482_1289258	Not Available	524	Open in IMG/M
3300031057\|Ga0170834_100651798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	703	Open in IMG/M
3300031231\|Ga0170824_118123106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	790	Open in IMG/M
3300031231\|Ga0170824_119089422	Not Available	662	Open in IMG/M
3300031446\|Ga0170820_10959741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1232	Open in IMG/M
3300031708\|Ga0310686_111058605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2971	Open in IMG/M
3300031708\|Ga0310686_113100686	Not Available	545	Open in IMG/M
3300031708\|Ga0310686_114180052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1071	Open in IMG/M
3300031708\|Ga0310686_116145864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1279	Open in IMG/M
3300031715\|Ga0307476_10402216	Not Available	1011	Open in IMG/M
3300031823\|Ga0307478_10628456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	899	Open in IMG/M
3300032515\|Ga0348332_10029951	Not Available	595	Open in IMG/M
3300032515\|Ga0348332_10167785	Not Available	1002	Open in IMG/M
3300032895\|Ga0335074_10091644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4032	Open in IMG/M
3300034124\|Ga0370483_0207951	Not Available	666	Open in IMG/M
3300034163\|Ga0370515_0002066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10071	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.50%
Aquatic	Environmental → Aquatic	11.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.03%
Peat	Environmental → Terrestrial → Peat	17.70%
Freshwater	Environmental → Aquatic → Freshwater	10.62%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.94%
Loam	Environmental → Terrestrial → Soil → Loam	23.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.08%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	17.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.54%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.77%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100516043	3300001546	Forest Soil	MIDYERLERGASGVDRVAKTQTDDDPLTAYATENDRLRKVIDVQKTEIGRLMRLLGIGLLHK*
JGI12635J15846_101950933	3300001593	Forest Soil	MIDYGRLERGASGVDRVAKTEPDPDDLSACTCENVRLRKVIDVQKTEIKRLMRLLGIGLQQR*
JGI12635J15846_108802312	3300001593	Forest Soil	MIDYQRLERGASGVVRRAPEQMDEDQLAAAECENARLRKVIDVQKSEINRLMRLLGMGLLQK*
JGI12627J18819_101888592	3300001867	Forest Soil	MIDYGRLERGASGVDRAAKTEPNMDELSACTCENVQLRKVIDVQKTEIKRLMRLLGLGLQQK*
JGIcombinedJ26739_1002762463	3300002245	Forest Soil	MIDYGRLERGASGVDRVAKTEPDADELSACTCENVRLRKVIDVQKTEIKRLMRLLGIGLQQK*
JGIcombinedJ26739_1007021333	3300002245	Forest Soil	MIDYERLERGASGVDRVAKAQTDDDPLTAYACENDRLRKVIDVQKTEIGRLMRLLGIGLLHK*
Ga0062385_106313072	3300004080	Bog Forest Soil	MIDYGRLERGLSGVEPSPKAQPDVDELTAYTLENARLKKVIDVQKAEIKRLMRLLGIGLQLK*
Ga0062385_108582071	3300004080	Bog Forest Soil	MIDYGRLERGASGVDRVAKTETDVDDLTACTCENVRLKKVIDVQKTEIKRLMRLLGIGLQQR*
Ga0062387_1006737272	3300004091	Bog Forest Soil	MIDYDRLERGLSGVEPSAKAEPDVDELKAYTLENTRLKKVIDVQKTEIKRLMRLLGIGLELR*
Ga0062387_1009347581	3300004091	Bog Forest Soil	MIDYGRLERGASGVDRVAKTETDVDELTACACENVQLRKVIDVQKTEIKRLMRLLGIGLHQK*
Ga0062387_1014890192	3300004091	Bog Forest Soil	MIDYERLERGASGVDRRAETQTDVDQLTAITCENVQLRKVIDVQKTEINRLMRLLGIGLQRR*
Ga0062389_1016536752	3300004092	Bog Forest Soil	MIDYERLERGASGVDRRAETQTDVDQLTAITCENVQLRKVIDVQKTEINRLMRLLGI
Ga0058882_14843762	3300004121	Forest Soil	MIDYGRLERGASGVDRVAKTETDVDDLTACSCENARLRKVIDVQKTEINRLMRLLGIGLQQR*
Ga0062386_1007812311	3300004152	Bog Forest Soil	MIDYERLVRGASGVDRRAEAQMDVDQLTAITCENTRLRKVIDVQKCEINRLMRLLGIGLQQR*
Ga0062388_1012529102	3300004635	Bog Forest Soil	IDYDRLERGLSGVEPSAKAEPDVDELKAYTLENTRLKKVIDVQKTEIKRLMRLLGIGLELR*
Ga0062388_1020776742	3300004635	Bog Forest Soil	MIDYGRLERGLSGVEPSPKAQPDVDQLTAYELENTRLKKVIDVQKIEIKRLMRLLGIGLQLK*
Ga0070730_100044354	3300005537	Surface Soil	MIDYSRLERGLSGVEPSAKAQPDIDQLTEYTLENARLKIVIDVQKTEIKRLMRLLGIRLQLK*
Ga0070733_104841281	3300005541	Surface Soil	GTGRMIDYGRLEKGLSGVEPSAKAEPDVDELTAYTLENARLKKVIDVQKTEIKRLMRLLGIGLQLK*
Ga0070761_108296602	3300005591	Soil	MIDYGRLERGASGVDRVAKTETDVDQLAACACENVQLRKVIDVQKTEIKR
Ga0070762_104256642	3300005602	Soil	MIDYNRLERGASGVDRSAQPQMDADQLTACTLENARLKEVIDVQKTEIKRLMRLLGIGLQQR*
Ga0070762_110694062	3300005602	Soil	MIDYGRLERGASGVDRVAKTETGVDELTACACENVQLRKVIDVQKTEIKRLMRLLGIGLQQK*
Ga0070764_104844572	3300005712	Soil	MIDYERLERGASGVDRIAKTETDDDPLTVYACENARLRKVIDVQKTEIGRLMRLLGIGLLHK*
Ga0070766_105215542	3300005921	Soil	MIDYDRLERGLSGVEPSTKAQPDTDQLTAYELENTRLKKVIDVQKIEIKRLMRLLGIGLQLK*
Ga0070765_1015060822	3300006176	Soil	MIDYARLEKGLSGVEPSAKTEPDVDELTAYTLENARLKKVIDVQKTEIKRLMRLLGIGLQLK*
Ga0073928_104277243	3300006893	Iron-Sulfur Acid Spring	MIDYARLEKGLSGVEPSAKTEPDVDELTAYTLENARLKKVIDVQKTEIKRLMRLLGIGLQ
Ga0104322_1427655	3300007819	Permafrost Soil	MIDYDRLERGLSGVEPSAKAEPDVDELKAYTLENTRLKKVIDVQKTEIRRLMRLLGIGLELR*
Ga0116125_11237472	3300009628	Peatland	MIDYERLERGASGVDRVEKAQTEEDPLTAYASENDRLRKVIDVQKTEIGRLMRLLGIGLLHK*
Ga0116135_10558783	3300009665	Peatland	MIDYQRLERGASGVERRALEQMDVDQLSAAVCENERLRKVIDVQKSEISRLMRLLGIGLLQK*
Ga0116135_10860451	3300009665	Peatland	MIDYQRLERGVSGVVRRAPEQMDEDQLTAAECENARLRKVIDVQKSEINRLMRLLGMGLLQK*
Ga0126344_12155351	3300010866	Boreal Forest Soil	MIDYGRLERGASGVDRVAKTETDEDQLTACNCENVRLKKVIDVQKSEIKRLMRLLGIGLQQK*
Ga0126344_13360542	3300010866	Boreal Forest Soil	MIDYGRLEKGLSGVEPSAKAEPDVDELTAYTIENARLRKVIDVQKTEIKRLMRLLGIGLQLK*
Ga0150983_127619371	3300011120	Forest Soil	MIDYERLERGASGVDRVAKAQTDDDPLTAYACENDRLRKVIDVQKTEIGRLMRLLGMGLLHK*
Ga0137392_110626352	3300011269	Vadose Zone Soil	MIDYGRLERGLSGVEPSAKAQPDVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLELR*
Ga0137391_103172102	3300011270	Vadose Zone Soil	MIDYGRLERGLSGVEPSAKAQPDVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR*
Ga0137385_108604501	3300012359	Vadose Zone Soil	LERGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR*
Ga0137398_101426552	3300012683	Vadose Zone Soil	MIDYDRLKRGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR*
Ga0137398_102425124	3300012683	Vadose Zone Soil	MIDYGRLERGLSGVEPSAKAQPDEDQLTTYTLENARLKKVIDVQKIEIKRLMRLLGIGLRLK*
Ga0137395_105491272	3300012917	Vadose Zone Soil	MIDYDRLKRGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLELR*
Ga0137413_103254022	3300012924	Vadose Zone Soil	MIDYGRLERGLSGVEPSAKAQPDIDQLTAYELENTRLKKVIDVQKIEIKRLMRLLGIGLQLR*
Ga0137419_105345703	3300012925	Vadose Zone Soil	MIDYDRLERGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLELR*
Ga0137416_117545062	3300012927	Vadose Zone Soil	MIDYDRLERGLSRVEPSANAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR*
Ga0137404_109105261	3300012929	Vadose Zone Soil	LPSRRPFLARAGTGGMIDYERLERGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR*
Ga0182018_102617692	3300014489	Palsa	CVPSRTTFIAPSGGHGMIDYERLERGASGVDRSAQPHKDGDQLTAYKLENTRLKEVIDVQKAEIRRLMRLLGIGLQQS*
Ga0182015_100218472	3300014495	Palsa	MIDYDRLERGLSGVEPSAKAQADEDQLTAFTLENARLKKVIDVQKIEIKRLMRLLGIGLQLR*
Ga0182015_101309692	3300014495	Palsa	MSSRIAFIAAGTGGMIDYDRLERGLSGVEPSPKAQPDIDELTAYTLENARLKKVIDVQKAEIKRLMRLLGIGLQLK*
Ga0182015_110223452	3300014495	Palsa	MIDYGRLERGASGVDRVAKTETDVDELTACTCENVQLRKVIDVQKTEIKRLMRLLGIG
Ga0182024_100253013	3300014501	Permafrost	MIDYNRLERGVSGVEPRAKTQTDVDELTAVALENARLKEVIDVQKTEIKRLMRLLGIGLELR*
Ga0137418_104125382	3300015241	Vadose Zone Soil	MIDYDRLERGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR*
Ga0179592_102006262	3300020199	Vadose Zone Soil	MIDYDRLKRGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR
Ga0210395_113990011	3300020582	Soil	MIDYGRLERGLSGVAPSAKAQPDEDQLTAYTLENARLKKVIDVQKIEIKRLMRLLGIGL
Ga0210401_102291222	3300020583	Soil	MIDYGRLERGASGVDRVAKTGTDVDELTACTCENVQLRKVIDVQKTEIKRLMRLLGIGLQQK
Ga0210401_102398253	3300020583	Soil	MIDYNRLERGASGVDRSAQPQMDADQLTACTLENARLKEVIDVQKTEIKRLMRLLGIGLQQR
Ga0179596_103769022	3300021086	Vadose Zone Soil	MIDYGRLERGLSGVEPSAKAQPDVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLELR
Ga0210406_103108071	3300021168	Soil	MIDYGRLERGLSGVEPSAKAEPDVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR
Ga0210396_101687482	3300021180	Soil	MIDYGRLERGLSGVAPSAKAQPDEDQLTAYTLENARLKKVIDVQKIEIKRLMRLLGIGLQLK
Ga0210396_117685481	3300021180	Soil	MIDYNRLERGASGVDRSAQPQMDADQLTACTLENARLKEVIDVQKTEIKRLMR
Ga0210388_109547811	3300021181	Soil	MIDYDRLERGLSGVEPSTKAQPDTDQLTAYELENTRLKKVIDVQKIEIKRLMRLLGIGLQLK
Ga0210393_104807752	3300021401	Soil	MIDYGRLERGASGVDRVAKTETDVDELTACTCENVQLRKVIDVQKTEIKRLMRLLGIGLQQK
Ga0210385_104764472	3300021402	Soil	MIDYERLERGASGVDRIAKTEPDDDPLTVYACENARLRKVIDVQKTEIGRLMRLLGIGLLHK
Ga0210387_103222162	3300021405	Soil	MIDYERLERGASGVDRVVKAQTDDDPLTAYATENDRLRKVIDVQKTEIGRLMRLLGMGLLHK
Ga0210386_107496791	3300021406	Soil	MIDYGRLERGASGVDRVAKTETGVDELTACACENVQLRKVIDVQKTEIKRLMRLLGIGLQ
Ga0210383_110127902	3300021407	Soil	PGMIDYERLERGASGVDRVVKAQTDDDPLTAYATENDRLRKVIDVQKTEIGRLMRLLGMGLLHK
Ga0179589_101334792	3300024288	Vadose Zone Soil	MIDYDRLERGLSGVEPSAKAEPAVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLELR
Ga0209110_10156832	3300027002	Forest Soil	MIDYGRLERGASGVDRAAKTEPNMDELSACTCENVQLRKVIDVQKTEIKRLMRLLGLGLQQK
Ga0209218_10497082	3300027505	Forest Soil	IDYGRLERGASGVDRVAKTEPEPDPDDLTACTCENVRLRKVIDVQKTEIKRLMRLLGIGLQQK
Ga0209222_10393391	3300027559	Forest Soil	MIDYGRLERGASGVDRVAKTEPDPDDLSACTCENVRLRKVIDVQKTEIKRLMRLLGIGLQQR
Ga0209221_11836921	3300027609	Forest Soil	MIDYERLERGASGVDRVAKAQTDDDPLTAYACENDRLRKVIDVQKTEIGRLMRLLGIGLLHK
Ga0209007_10977901	3300027652	Forest Soil	SNVKPAGGVAMIDYQRLERGASGVDRRAPVEMDDDQLTATACENARLRKVIDVQKSEINRLMRLLGIGLLQK
Ga0209166_103698831	3300027857	Surface Soil	RLERGLSGVEPSAKAQPDIDQLTEYTLENARLKIVIDVQKTEIKRLMRLLGIRLQLK
Ga0209167_107846002	3300027867	Surface Soil	MIDYSRLERGLSGVEPSAKAQPDIDQLTEYTLENARLKKVIDVQKTEIKRLMRLLGIGLQLK
Ga0209169_101382512	3300027879	Soil	MIDYERLERGASGVDRIAKTETDDDPLTVYACENARLRKVIDVQKTEIGRLMRLLGIGLLHK
Ga0209624_100990523	3300027895	Forest Soil	MIDYERLERGASGVDRVAKTQTDDDPLTAYATENDRLRKVIDVQKTEIGRLMRLLGIGLLHK
Ga0209624_104139482	3300027895	Forest Soil	MIDYGRLERGASGVDRVAKTEPDADELSACTCENVRLRKVIDVQKTEIKRLMRLLGIGLQQK
Ga0209624_108334462	3300027895	Forest Soil	MIDYERLERGASGVDRIAKAQTDGDQLTAYACENARLRKVIDVQKSEIGRLMRL
Ga0209006_100592883	3300027908	Forest Soil	MIDYQRLERGASGVDRIAKEEAAEDPLTVYACENARLRKVIDVQKTEIGRLMRLLGIGLQQK
Ga0209006_102608063	3300027908	Forest Soil	MIDYQRLERGASGVDRRAPVEMDDDQLTATACENARLRKVIDVQKSEINRLMRLLGIGLLQK
Ga0302222_101348191	3300028798	Palsa	ERGASGVERRALEQMDVDQLSAAVCENERLRKVIDVQKSEINRLMRLLGMGLLQK
Ga0302222_103032553	3300028798	Palsa	MIDYQRLERGASGVERRALEQMDVDQLSAAVCENERLRKVIDVQKSEISR
Ga0308309_110472551	3300028906	Soil	MIDYARLEKGLSGVEPSAKTEPDVDELTAYTLENARLKKVIDVQKTEIKRLMRLLGIGLQLK
Ga0311368_101958363	3300029882	Palsa	MIDYDRLERGLSGVEPSAKAQADEDQLTAFTLENARLKKVIDVQKIEIKRLM
Ga0311340_110101651	3300029943	Palsa	MIDYGRLERGASGVDRIAKTETDVDQLTACTCENVRLKQVIDVQKTEIKRLMRLLGIGLQQK
Ga0311340_110211561	3300029943	Palsa	MIDYHRLEKGVRGVERRANTEVDLDQLTAATCENARLREVIDVQKSE
Ga0311352_106286071	3300029944	Palsa	MIDYQRLERGVSGVVRRAPEQMDEDQLTAAECENARLRKVIDVQKSEINRLMRLLGMGLLQK
Ga0311352_114514081	3300029944	Palsa	MIDYDRLVRGLSGVEPSAKAQADEDQLTAFTLENARLKKVIDVQKIEIKRLMRLLGIGLQLR
Ga0311371_102954502	3300029951	Palsa	MIDYDRLERGLSGVEPSAKAQADEDQLTAFTLENARLKKVIDVQKIEIKRLMRLLGIGLQLR
Ga0311339_102416952	3300029999	Palsa	MIDYQRLERGASGVERRALEQMDVDQLSAAVCENERLRKVIDVQKSEISRLMRLLGIGLLQK
Ga0311338_101772115	3300030007	Palsa	IDYQRLERGVSGVVRRAPEQMDEDQLTAAECENARLRKVIDVQKSEINRLMRLLGMGLLQ
Ga0311338_116817542	3300030007	Palsa	MIDYGRLERGASGVDRIAKTETDVDQLTACTCENVRLKQVIDVQKTEIKRLMRL
Ga0302306_103152812	3300030043	Palsa	MIDYERLERGASGVDRMAETEMDVDQLTACTCENVRLRKVIDVQKSEIRRLMRLLGIGLLQK
Ga0311353_100541097	3300030399	Palsa	MIDYERLERGASGVDRVAKAQTDDDPLTAYATENDRLRKVIDVQKTEIGRLMRLLGIGLLHK
Ga0311353_103072071	3300030399	Palsa	GDVMIDYQRLERGVSGVVRRAPEQMDEDQLTAAECENARLRKVIDVQKSEINRLMRLLGMGLLQK
Ga0311353_115358222	3300030399	Palsa	MIDYDRLERGLSGVEPSAKAQADEDQLTAFTLENARLKKVIDVQKIEIKRLMRQLGIGLQLR
Ga0311370_119434222	3300030503	Palsa	MIDYGRLERGVSGVERSANTAIDVDQLTGYILENARLKEVIGVQKTEIKRLMRLLGIGLQLK
Ga0311357_107574172	3300030524	Palsa	MIDYDRLERGLSGVEPSAKAQADEDQLTAFTLENARLKKVIDVQKIEIKRLMRLLGI
Ga0311357_107594481	3300030524	Palsa	MIDYQRLERGASGVERRALEQMDVDQLSAAVCENERLRKVIDVQKSEISRLMRLLG
Ga0311355_112580541	3300030580	Palsa	MIDYHRLEKGVRGVERRANTEVDLDQLTAATCENARLREVIDVQKSEIKRLMRLLGM
Ga0311354_101773693	3300030618	Palsa	MIDYERLERGASGVDRVAKAQTDGDPLTAYATENDRLRKVIDVQKTEIGRLMRLLGIGLLHK
Ga0307482_12892582	3300030730	Hardwood Forest Soil	MIDYGRLERGASGVDRVAKTEPDVDELSACTCENVRLRKVIDVQKTEIKRLMRLLGIGLQQK
Ga0170834_1006517982	3300031057	Forest Soil	MIDYDRLERGLSGVEPSIKAQPDIDQLTAYTLENARLKKVIDVQKIEIKRLMRLLGIGLQLK
Ga0170824_1181231062	3300031231	Forest Soil	MIDYSRLEKGLSGVEPSAEAEPDVDELTAHTLENARLKKMIDVQKTEIKRLMRLLGIGLQLK
Ga0170824_1190894222	3300031231	Forest Soil	MIDYERLERAASGVDRVVKAQTDDDPLTAYATENDRLRKVIDVQKSEIGRLMRLLGMGLRQK
Ga0170820_109597412	3300031446	Forest Soil	MIDYGRLERGLSGVEPSAKAQPDVDELTTYTLENERLKKVIDVQKTEIKRLMRLLGIGLQLR
Ga0310686_1110586051	3300031708	Soil	MIDYGRLERGASGVDRVAKTETDVDELTACACENVQLRKVIDVQKTEIKRLMRLLGIGLHQK
Ga0310686_1131006862	3300031708	Soil	MIDYQRLERGASGVDRIAKTQTDDDPLTAYASENARLRKVIDVQKSEIGRLMRLLGIGLLHK
Ga0310686_1141800521	3300031708	Soil	MIDYGRLEKGLSGVEPSAKAEPDVDELTAYTLENARLKKVIDVQRTEIKRLMRLLGIGLQLK
Ga0310686_1161458642	3300031708	Soil	MIDYQRLERGASGVVRHAPEQMDEDQLIAAECENARLRKVIDVQKSEINRLMRLLGMGLLQK
Ga0307476_104022162	3300031715	Hardwood Forest Soil	MIDYQRLERGASGVDRIAKEETDEDPLTVYASENARLRKVIDVQKTEIGRLMRLLGIGLQQK
Ga0307478_106284562	3300031823	Hardwood Forest Soil	MIDYDRLERGLSGVEPSTKAQPDIDQLTAYPLENAQLKKVIDVQKTEIRRLMRLLGIGLQLK
Ga0348332_100299511	3300032515	Plant Litter	MIDYQRLERGASGVVRRAPEQMDEDQLIAAECENARLRKVIDVQKSEINRLMRLLGMGLLQK
Ga0348332_101677851	3300032515	Plant Litter	MIDYGRLEKGASGVDRVAKTETDVDQLTACACENVQLRKVIDVQKTEIKRLMRLLGMGLLRK
Ga0335074_100916444	3300032895	Soil	MIDYDRLERGARGVDRRRTESNNEVDELTAATSENARLRKVIDVQKTEINRLMRLLGMGLQQK
Ga0370483_0207951_127_315	3300034124	Untreated Peat Soil	MIDYERLERGASGVDRVEKAQADEDPLTAYASENDRLRKVIDVQKTEIGRLMRLLGIGLLHK
Ga0370515_0002066_3913_4101	3300034163	Untreated Peat Soil	MIDYDRLERGLSGVEPSPKAQPDIDELTAYTLENARLKKVIDVQKAEIKRLMRLLGIGLQLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences