Metagenome Family F082898

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082898
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	86 residues
Representative Sequence	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ
Number of Associated Samples	97
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.80 %
% of genes near scaffold ends (potentially truncated)	34.51 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.062 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (13.274 % of family members)
Environment Ontology (ENVO)	Unclassified (47.788 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.106 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.47% β-sheet: 16.67% Coil/Unstructured: 43.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00072	Response_reg	7.96
PF00166	Cpn10	7.96
PF04107	GCS2	5.31
PF01192	RNA_pol_Rpb6	3.54
PF13590	DUF4136	3.54
PF00076	RRM_1	1.77
PF00398	RrnaAD	0.88
PF12796	Ank_2	0.88
PF00118	Cpn60_TCP1	0.88
PF12844	HTH_19	0.88
PF07676	PD40	0.88
PF12293	T4BSS_DotH_IcmK	0.88
PF12869	tRNA_anti-like	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	7.96
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	3.54
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.88
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
All Organisms	root	All Organisms	38.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
cellular organisms	root	All Organisms → cellular organisms	38.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	9.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	7.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.77 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	7.96 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Rickettsiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	7.96 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	1.77 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Rickettsieae	tribe	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	7.96 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.77 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Rickettsia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	7.96 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.77 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
belli group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → belli group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	7.96 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.77 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Rickettsia bellii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → belli group → Rickettsia bellii	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	7.96 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1.77 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Rickettsia bellii RML369-C	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → belli group → Rickettsia bellii → Rickettsia bellii RML369-C	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16521452	All Organisms → cellular organisms → Bacteria → Acidobacteria	16164	Open in IMG/M
2162886012\|MBSR1b_contig_3824864	Not Available	845	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101686217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1319	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101688874	All Organisms → cellular organisms → Bacteria → Acidobacteria	3563	Open in IMG/M
3300000559\|F14TC_101008016	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300000789\|JGI1027J11758_12929533	Not Available	580	Open in IMG/M
3300001431\|F14TB_103059120	Not Available	1216	Open in IMG/M
3300002099\|JGI24808J26613_1032775	Not Available	741	Open in IMG/M
3300004013\|Ga0055465_10049439	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300004114\|Ga0062593_100939396	Not Available	879	Open in IMG/M
3300004480\|Ga0062592_100792105	Not Available	839	Open in IMG/M
3300005093\|Ga0062594_102710215	Not Available	549	Open in IMG/M
3300005293\|Ga0065715_10062179	Not Available	698	Open in IMG/M
3300005293\|Ga0065715_10259031	All Organisms → cellular organisms → Bacteria → Acidobacteria	1121	Open in IMG/M
3300005294\|Ga0065705_10033872	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300005295\|Ga0065707_10178509	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300005330\|Ga0070690_100138782	All Organisms → cellular organisms → Bacteria → Acidobacteria	1649	Open in IMG/M
3300005334\|Ga0068869_100146677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1827	Open in IMG/M
3300005334\|Ga0068869_100217757	Not Available	1512	Open in IMG/M
3300005337\|Ga0070682_100535530	Not Available	914	Open in IMG/M
3300005340\|Ga0070689_101254193	Not Available	666	Open in IMG/M
3300005353\|Ga0070669_100288899	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005355\|Ga0070671_100018975	All Organisms → cellular organisms → Bacteria	5592	Open in IMG/M
3300005355\|Ga0070671_101927516	Not Available	526	Open in IMG/M
3300005364\|Ga0070673_100562223	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005438\|Ga0070701_10271953	Not Available	1031	Open in IMG/M
3300005438\|Ga0070701_10949575	Not Available	597	Open in IMG/M
3300005440\|Ga0070705_100896345	Not Available	713	Open in IMG/M
3300005441\|Ga0070700_100540989	Not Available	903	Open in IMG/M
3300005444\|Ga0070694_100771310	Not Available	786	Open in IMG/M
3300005444\|Ga0070694_101322005	Not Available	607	Open in IMG/M
3300005466\|Ga0070685_10532964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	835	Open in IMG/M
3300005467\|Ga0070706_101903692	Not Available	539	Open in IMG/M
3300005468\|Ga0070707_100472360	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300005471\|Ga0070698_100143469	All Organisms → cellular organisms → Bacteria → Acidobacteria	2338	Open in IMG/M
3300005471\|Ga0070698_100927978	Not Available	817	Open in IMG/M
3300005518\|Ga0070699_101607165	Not Available	596	Open in IMG/M
3300005543\|Ga0070672_100328832	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300005546\|Ga0070696_100542466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	931	Open in IMG/M
3300005549\|Ga0070704_101894967	Not Available	552	Open in IMG/M
3300005617\|Ga0068859_100260020	Not Available	1827	Open in IMG/M
3300005617\|Ga0068859_100606090	Not Available	1188	Open in IMG/M
3300005618\|Ga0068864_101954546	Not Available	592	Open in IMG/M
3300005841\|Ga0068863_100149375	All Organisms → cellular organisms → Bacteria → Acidobacteria	2235	Open in IMG/M
3300005841\|Ga0068863_101861625	Not Available	612	Open in IMG/M
3300005843\|Ga0068860_100497734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1216	Open in IMG/M
3300006196\|Ga0075422_10210698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Rickettsiaceae → Rickettsieae → Rickettsia → belli group → Rickettsia bellii → Rickettsia bellii RML369-C	803	Open in IMG/M
3300006358\|Ga0068871_100062598	All Organisms → cellular organisms → Bacteria	3041	Open in IMG/M
3300006852\|Ga0075433_11842405	Not Available	520	Open in IMG/M
3300006876\|Ga0079217_10112804	Not Available	1247	Open in IMG/M
3300006881\|Ga0068865_100011591	All Organisms → cellular organisms → Bacteria → Acidobacteria	5524	Open in IMG/M
3300007004\|Ga0079218_13754469	Not Available	516	Open in IMG/M
3300009094\|Ga0111539_10452899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1494	Open in IMG/M
3300009100\|Ga0075418_10759936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300009100\|Ga0075418_10871968	Not Available	973	Open in IMG/M
3300009147\|Ga0114129_10742348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1257	Open in IMG/M
3300009156\|Ga0111538_10328760	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300009553\|Ga0105249_10489107	Not Available	1274	Open in IMG/M
3300010375\|Ga0105239_10612233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1243	Open in IMG/M
3300010397\|Ga0134124_10305486	Not Available	1484	Open in IMG/M
3300010399\|Ga0134127_10723684	Not Available	1037	Open in IMG/M
3300010399\|Ga0134127_11175099	Not Available	833	Open in IMG/M
3300010400\|Ga0134122_10452887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1148	Open in IMG/M
3300012486\|Ga0157331_1013162	Not Available	645	Open in IMG/M
3300012501\|Ga0157351_1006578	Not Available	966	Open in IMG/M
3300012519\|Ga0157352_1002586	Not Available	1482	Open in IMG/M
3300012896\|Ga0157303_10275858	Not Available	525	Open in IMG/M
3300012951\|Ga0164300_10422342	Not Available	739	Open in IMG/M
3300012957\|Ga0164303_11333193	Not Available	533	Open in IMG/M
3300012958\|Ga0164299_10264373	Not Available	1036	Open in IMG/M
3300012961\|Ga0164302_10293614	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300013102\|Ga0157371_10466332	Not Available	930	Open in IMG/M
3300013296\|Ga0157374_11845230	Not Available	630	Open in IMG/M
3300013306\|Ga0163162_11639098	Not Available	734	Open in IMG/M
3300013306\|Ga0163162_11847421	Not Available	691	Open in IMG/M
3300014745\|Ga0157377_10740532	Not Available	718	Open in IMG/M
3300014968\|Ga0157379_11238656	Not Available	719	Open in IMG/M
3300015371\|Ga0132258_10477814	All Organisms → cellular organisms → Bacteria → Acidobacteria	3112	Open in IMG/M
3300015372\|Ga0132256_101619139	Not Available	757	Open in IMG/M
3300015373\|Ga0132257_101197222	Not Available	961	Open in IMG/M
3300015373\|Ga0132257_103025468	Not Available	612	Open in IMG/M
3300015374\|Ga0132255_102105217	Not Available	860	Open in IMG/M
3300017792\|Ga0163161_10953311	Not Available	730	Open in IMG/M
3300025315\|Ga0207697_10490916	Not Available	543	Open in IMG/M
3300025899\|Ga0207642_10556423	Not Available	709	Open in IMG/M
3300025903\|Ga0207680_10150908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1549	Open in IMG/M
3300025907\|Ga0207645_10220219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1251	Open in IMG/M
3300025910\|Ga0207684_11242726	Not Available	615	Open in IMG/M
3300025922\|Ga0207646_10568569	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300025923\|Ga0207681_10344043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1192	Open in IMG/M
3300025923\|Ga0207681_10808603	Not Available	783	Open in IMG/M
3300025926\|Ga0207659_10295308	Not Available	1329	Open in IMG/M
3300025930\|Ga0207701_11613404	Not Available	522	Open in IMG/M
3300025931\|Ga0207644_10139531	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300025938\|Ga0207704_10430705	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300025941\|Ga0207711_10627603	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300025941\|Ga0207711_10907250	Not Available	819	Open in IMG/M
3300025960\|Ga0207651_10098555	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300025960\|Ga0207651_10892370	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300025961\|Ga0207712_10363619	Not Available	1206	Open in IMG/M
3300025981\|Ga0207640_10657220	Not Available	894	Open in IMG/M
3300026088\|Ga0207641_11804965	Not Available	613	Open in IMG/M
3300026089\|Ga0207648_10592421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1021	Open in IMG/M
3300026121\|Ga0207683_11693501	Not Available	582	Open in IMG/M
3300027018\|Ga0208475_1012066	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300027637\|Ga0209818_1049268	Not Available	1015	Open in IMG/M
3300027873\|Ga0209814_10410525	Not Available	596	Open in IMG/M
3300027907\|Ga0207428_10835462	Not Available	653	Open in IMG/M
3300027909\|Ga0209382_11467424	Not Available	681	Open in IMG/M
3300028381\|Ga0268264_10021959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5208	Open in IMG/M
3300031944\|Ga0310884_10657509	Not Available	631	Open in IMG/M
3300033412\|Ga0310810_10591519	Not Available	1069	Open in IMG/M
3300034174\|Ga0334932_004201	All Organisms → cellular organisms → Bacteria → Acidobacteria	2304	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.98%
Environmental	Environmental	46.02%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.98%
Terrestrial	Environmental → Terrestrial	45.13%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.89%
Marine	Environmental → Aquatic → Marine	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.66%
Loam	Environmental → Terrestrial → Soil → Loam	19.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03401940	2088090014	Soil	MAVHINEMNGMFVVEWNRRQKHFHIQALGEILKGNLLAVVNGRDSGYVPVAIALTKGEAIEMSKLIEGKLRSLRRLHRVDSSDTLQ
MBSR1b_0301.00002640	2162886012	Miscanthus Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEKEALEITKLIGAKLKKLSRAHRADSVDTLH
INPhiseqgaiiFebDRAFT_1016862171	3300000364	Soil	MAVDINEMNGMFVVEWNRMQRHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLXSLRRTHRXDXSDTLQ*
INPhiseqgaiiFebDRAFT_1016888745	3300000364	Soil	MAVHINEMNGMFVVEWNRRQKHFHIQALGEILKGNLLAVVNGRDSGYVPVAIALTKGEAIEMSKLIEGKLRSLRRLHRVDSSDTLQ*
F14TC_1010080162	3300000559	Soil	MALDINEMNGMFVVEWNRKEQHFQIQRLGEILKNNLLAAVNRQDSGYVPVAIANTEREAHEMAKLNEAKLKKLRRAHRVDSSDTLH*
JGI1027J11758_129295332	3300000789	Soil	FVVEWNRRQKHFHIQALGEILKXNLLAXVNGRDSGYVPVAIALTKGEAXEMSKLXEGKLRSLRRLHRVDSSDTLQ*
F14TB_1030591202	3300001431	Soil	VKDPLIVRKGSIMAVHINEMNGMFVVEWNRRQKHFHIQALGEILKGNLLAAVNGRDSGYVPVAIALTKGEALEMSKLIEVKLRSLRRFHRVDSSDTLQ*
JGI24808J26613_10327753	3300002099	Soil	MAVDIIAMNGMFVVEWNRTQKHFHIQALGEILKGNLHAAVNGRDSGYIPVAIAQTKGEALEMSKLIEVKLRSLRRLNRVDSSDTLQ*
Ga0055465_100494392	3300004013	Natural And Restored Wetlands	MAVDINEMNGMFVVEWNRRQKRFQIQTLGEILKGNLLAAVNERDYGYSPVAIAQTKEEALEMSKLIDVKLRTLRRLHRLDSSDTLQ*
Ga0062593_1009393961	3300004114	Soil	MAVKINEMNGMFVVEWNRRQKHFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTRGEALEMSKLIEVELRSLRRVHRRASADTLQ*
Ga0062592_1007921051	3300004480	Soil	MAVDINEMNGMFVVEWNRMQRHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ*
Ga0062594_1027102151	3300005093	Soil	MAVKINEMNGMFVVEWNRRQKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0065715_100621791	3300005293	Miscanthus Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ*
Ga0065715_102590311	3300005293	Miscanthus Rhizosphere	MAVDINETNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ*
Ga0065705_100338721	3300005294	Switchgrass Rhizosphere	MAIDINEMNKMFAVNWNARQKKLHVQTLGEILKSNLLAAVNGRDSGYVPIVIAHTEREAFEMTKLIEKKLKRSRQAHRIDSSDTLH*
Ga0065707_101785091	3300005295	Switchgrass Rhizosphere	MAIDINEMNKMFAVNWNARQKKLHVQTLGEILKSNLLAAVNGRDSGYVPIVIAHTEREAFEMTKLIEKKLKRSRQAHRTDSSDTLH*
Ga0070690_1001387821	3300005330	Switchgrass Rhizosphere	RFSNSRVRRKLIQDPSIVRKGCIMAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0068869_1001466773	3300005334	Miscanthus Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0068869_1002177571	3300005334	Miscanthus Rhizosphere	MAVKINEMNGMFVVEWNRRRKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0070682_1005355303	3300005337	Corn Rhizosphere	MAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ*
Ga0070689_1012541931	3300005340	Switchgrass Rhizosphere	MAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRR
Ga0070669_1002888993	3300005353	Switchgrass Rhizosphere	VVKDRLIIREGSVMAVNINEMNGMFVVEWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDTLE*
Ga0070671_1000189754	3300005355	Switchgrass Rhizosphere	MAVDIKEMNGMFVVEWNRRQKHLQIQALGEILKGNLLAAVNGRDSGYFPLAIARTKGEALEMSKLIEVKLKTLRRFHRADSSDTLQ*
Ga0070671_1019275162	3300005355	Switchgrass Rhizosphere	MAVKINEMNGMFVVEWNRRQKHFHIRALGEILKSNLSAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRSLRRVHRRASADTL
Ga0070673_1005622231	3300005364	Switchgrass Rhizosphere	EWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDTLE*
Ga0070701_102719531	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEKEALEITKLIGAKLKKLSRAHRADSVDTLH*
Ga0070701_109495751	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTL
Ga0070705_1008963451	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRGSGYVPVAIAHTEREALEIAKLIGAKLKKLSRAHRADSVDTLH*
Ga0070700_1005409892	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEKEALEITKLIGAKLKKLSRAHRA
Ga0070694_1007713102	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALEIAKLIGAKLKKLSRAHRADSVDTLH*
Ga0070694_1013220051	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LGKVNIMAIDINEMNEMFVVEWSSSQKQFHIHALGEMLKSNLRAVVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0070685_105329643	3300005466	Switchgrass Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRR
Ga0070706_1019036922	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAIDINEMNEMFVVEWSSSQKQFHIHALGEMLKSNLRAVINGRDSGYVPVAIARTEVEALKMSKLIEVKLKKLRQPHRLDSSDTLH*
Ga0070707_1004723603	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAIDINEMNEMFVVEWSSSQKQFHIHALGEMLKSNLRAAVNGRDSGYVPVAIARTEVEALKMSNLIEVKLKKLRQPHRLDSSDTLH*
Ga0070698_1001434695	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSVDITELNGMFVVEWNRRKKHFHIQTLGEILKGNLTAAVNGRASGYSPVAIAQTQGEALAMSKLIEVKLRSLPRVHRVESSDTLQ*
Ga0070698_1009279782	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAIDINEMNEMFVVEWSSSQKQFHIHALGEMLKSNLRAAVNGRDSGYVPVAIARTEVEALKMSKLIEVKLKKLRQPHRLDSSDTLH*
Ga0070699_1016071652	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAIDINEMNEMFVVEWSSSQKQFHIHALGEMLKSNLRAAVNGRDSGYVPVAIARTEVEALKMSKLIEVKLKKLRPHRLDSSDTLH*
Ga0070672_1003288322	3300005543	Miscanthus Rhizosphere	MAVNINEMNGMFVVEWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDTLE*
Ga0070696_1005424661	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	NEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0070704_1018949671	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	INEMNGMFVVEWNRRQKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0068859_1002600203	3300005617	Switchgrass Rhizosphere	VKDRLIIREGSVMAVNINEMNGMFVVEWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDTLE*
Ga0068859_1006060903	3300005617	Switchgrass Rhizosphere	VGVDINEMNGMFVVEWNRRQRQFQIQPLGETLKANLLAAVNGRDSGYRPLAIAQTKEEALNMSKLIKLKLSSLPRHHRAGSSDTLQ*
Ga0068864_1019545462	3300005618	Switchgrass Rhizosphere	SFFWFSGRFSNSRVRRKLIRDPSIVRKGSIMAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ*
Ga0068863_1001493753	3300005841	Switchgrass Rhizosphere	EMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0068863_1018616251	3300005841	Switchgrass Rhizosphere	NLVVKRPLIVRKDSIMAVKINEMNGMFVVEWNRRRKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0068860_1004977341	3300005843	Switchgrass Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLR
Ga0075422_102106983	3300006196	Populus Rhizosphere	VVEWNRRQRHFQIQALGEILKSNLLAAINKRDRGYVPVAIANTEGEALKMSNLIEAKLKKLRQTHREDSSDTLH*
Ga0068871_1000625985	3300006358	Miscanthus Rhizosphere	MAVKINEMNGMFVVEWNRRQKHFHIRALGEILKSNLSAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRSLRRVHRRASADTLQ*
Ga0075433_118424052	3300006852	Populus Rhizosphere	MAVDINEMNKMFVVEWNARQKKFHIQTLDEILKSNLLAAVNGRASGYVPVAIAHTEREALEMVKLIEAKLKKLRRAPRVDSSDTLH*
Ga0079217_101128042	3300006876	Agricultural Soil	MAVDINELNGMFVVEWNRRQKHLHIQALGEILKGNLRAVVNGRDSGYVPVAIARTKGEAVEMCRLIDVKLRSLPTRHPVDSADTLQ*
Ga0068865_1000115911	3300006881	Miscanthus Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEEEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0079218_137544691	3300007004	Agricultural Soil	NGMFVVEWNRRQKHFHIQALGEILKGNLLAAVNGRNSGYVPVAIAQTKGEALEMSKLIEVKLRSLRRLHRVASSDTLQ*
Ga0111539_104528992	3300009094	Populus Rhizosphere	LAEAFSGKVVIVAVDINEMNGMFVVEWNRRQKHFQIQALGEILKSNLLAAINKRDRGYVPVAIANTEGEALKMSKLIEAKLKKLRQTHREDSSDTLH*
Ga0075418_107599362	3300009100	Populus Rhizosphere	MALDINEMNGMFVVEWNRKAKHFQIQTLGEILKNNLLAAVNRQASGYVPVAIAHTEREALEMAKLIEAKLKKLRRAHRVDSADTLH*
Ga0075418_108719682	3300009100	Populus Rhizosphere	MAVDINEMNGMFVVEWHRRKKHFHIQTLGEILKGNLLAAVNGRDSGYSPVAIAQTQGEALAMSKLIEVRLTSLPRVHRVESSDTLQ*
Ga0114129_107423483	3300009147	Populus Rhizosphere	MAVDINEMNGMFVVEWHRRKKHFHIQTLGEILKGNLLAAVNGRDSGYSPVAIAQTQGEALAMSKLIEVKLRSLPRVHRVESSDTLQ*
Ga0111538_103287602	3300009156	Populus Rhizosphere	MAVDINEMNKMFVVEWNRRKKHFHIQALGEILKANLLAAVNGRDSGYLPVAIAQTEREAAEMSKLIEAKLKSLPRRHRVDSSDTLDT*
Ga0105249_104891072	3300009553	Switchgrass Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALEIAKLIGAKLKKLSRAHSGR*
Ga0105239_106122333	3300010375	Corn Rhizosphere	IRDPSIVRKGSIMAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVSVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0134124_103054861	3300010397	Terrestrial Soil	NLVVKRPLIVRKDSIMAVRINEMNGMFVVEWNRRRKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0134127_107236842	3300010399	Terrestrial Soil	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRGSGYVPVAIAHTEREALEIAKLIGAKLKKLSQAHRADSVDTLH*
Ga0134127_111750991	3300010399	Terrestrial Soil	MAVDINEMNGMFVVEWNRMQRHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0134122_104528871	3300010400	Terrestrial Soil	PSIVRKGCIMAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0157331_10131622	3300012486	Soil	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0157351_10065781	3300012501	Unplanted Soil	NRRQKHFHIQALGEILKGNLLAAVNGRDSGYVPVAIALTEGEAVEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0157352_10025862	3300012519	Unplanted Soil	MAVKINEMNGLFVVEWNRRQKHFHIRALGEILKSNLSAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRSLRRVHRRASADTLQ*
Ga0157303_102758581	3300012896	Soil	MAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALGMSKLIQVKLRSLRRTHRVDSSDTLQ*
Ga0164300_104223421	3300012951	Soil	VFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALEIAKLIGAKLKKLSRAHRADSVDTLH*
Ga0164303_113331932	3300012957	Soil	MAVKINEMNGMFVVEWNRRQKHFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELSLRRVHRRASADTLQ*
Ga0164299_102643731	3300012958	Soil	IMALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALEIAKLIGAKLKKLSRAHRADSVDTLH*
Ga0164302_102936142	3300012961	Soil	MYVLTSKSCREKTFDYSESSIMAVKINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVSVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0157371_104663321	3300013102	Corn Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHKEREALEIAKLIGAKLKKLSRAHRADSVDTLH*
Ga0157374_118452301	3300013296	Miscanthus Rhizosphere	NGMFVVEWNRMHKHFHIQTLGEILKDNLLAAVNGRDSGYVPVAIAQTEEEALEMSKLIQVKLRSLRRAHRIDSSDTLQ*
Ga0163162_116390981	3300013306	Switchgrass Rhizosphere	MALDINEMNAVFVVEWNRKKKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEKEALEITKLIGAKLKKLSRAHRADSVDTLH*
Ga0163162_118474211	3300013306	Switchgrass Rhizosphere	MAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRV
Ga0157377_107405321	3300014745	Miscanthus Rhizosphere	MAVKMNEMNGMFVVEWNRRRKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0157379_112386561	3300014968	Switchgrass Rhizosphere	GSIMAVKINEMNGMFVVEWNRRQKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0132258_104778145	3300015371	Arabidopsis Rhizosphere	MAVDINEMNGMFVVEWNRRQKHFHIQVLGKILKDNLLAAVNGRDTGYVPVAVARTKGEAVEMSKLIEVELRNLRRLHRVASSDTLQ*
Ga0132256_1016191391	3300015372	Arabidopsis Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRGSGYVPVAIAHTEREALEIAKLIGAKLKKLSRAQRADSVDTLH*
Ga0132257_1011972222	3300015373	Arabidopsis Rhizosphere	FVVEWNRRQKHFHIRALGEILKSNLSAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRSLRRVHRRASADTLQ*
Ga0132257_1030254682	3300015373	Arabidopsis Rhizosphere	ALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALEIAKLIGAKLKKLSRAHRADSVDTLH*
Ga0132255_1021052171	3300015374	Arabidopsis Rhizosphere	KSCREKTFDYSESSIMAVKINEMNGMFVVEWNRRQKHFHIRALGEILKSNLSAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRSLRRVHRRASADTLQ*
Ga0163161_109533111	3300017792	Switchgrass Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDTLQ
Ga0207697_104909162	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQXNLLLTF
Ga0207642_105564232	3300025899	Miscanthus Rhizosphere	MAVKINEMNGMFVVEWNRRRKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ
Ga0207680_101509082	3300025903	Switchgrass Rhizosphere	MAVKINEMNGMFVVEWSRRQKDFHILALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ
Ga0207645_102202191	3300025907	Miscanthus Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRAHRIDSSDT
Ga0207684_112427261	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAIDINEMNEMFVVEWSSSQKQFHIHALGEMLKSNLRAVINGRDSGYVPVAIARTEVEALKMSKLIEVKLKKLRQPHRLDSSDTLH
Ga0207646_105685691	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAIDINEMNEMFVVEWSSSQKQFHIHALGEMLKSNLRAAVNGRDSGYVPVAIARTEVEALKMSNLIEVKLKKLRQPHRLDSSDTLH
Ga0207681_103440431	3300025923	Switchgrass Rhizosphere	MAVDINEMNGMFVVEWNRMQRHFHIQALGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ
Ga0207681_108086032	3300025923	Switchgrass Rhizosphere	VVKDRLIIREGSVMAVNINEMNGMFVVEWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDTLE
Ga0207659_102953081	3300025926	Miscanthus Rhizosphere	EWNRRQKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ
Ga0207701_116134041	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VVKDRLIIREGSVMAVNINEMNGMFVVEWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDT
Ga0207644_101395312	3300025931	Switchgrass Rhizosphere	MAVKINEMNGMFVVEWNRRQKHFHIRALGEILKSNLSAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ
Ga0207704_104307051	3300025938	Miscanthus Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEEEALEMSKLIQVKLRSLRRAHRIDSSDTLQ
Ga0207711_106276032	3300025941	Switchgrass Rhizosphere	MAVKINEMNGMFVVEWNRRQKHFHIRALGEILKSNLSAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRSLRRVHRRASADTLQ
Ga0207711_109072501	3300025941	Switchgrass Rhizosphere	MAVDINEMNGMFVVEWNRMHKHFHIQTLGEILKGNLLAAVNGRDSGYVPVAIAQTEGEALEMSKLIQVKLRSLRRTHRVDSSDTLQ
Ga0207651_100985552	3300025960	Switchgrass Rhizosphere	MAVKINEMNGMFVVEWNRRQKHFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTRGEALEMSKLIEVELRSLRRVHRRASADTLQ
Ga0207651_108923702	3300025960	Switchgrass Rhizosphere	EWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDTLE
Ga0207712_103636192	3300025961	Switchgrass Rhizosphere	MALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALEIAKLIGAKLKKLSRAHSGR
Ga0207640_106572202	3300025981	Corn Rhizosphere	MAVKINEMNGMFVVEWNRRQKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ
Ga0207641_118049652	3300026088	Switchgrass Rhizosphere	NLVVKRPLIVRKDSIMAVKINEMNGMFVVEWNRRRKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ
Ga0207648_105924211	3300026089	Miscanthus Rhizosphere	MAVKINEMNGMFVVEWNRRQKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRR
Ga0207683_116935012	3300026121	Miscanthus Rhizosphere	GMFVVEWNRRQKDFHIQALGEILKGNLRAAVNGRDSGYVPVAIAQTKGEALEMSKLIEVELRNLRRLHRVASSDTLQ
Ga0208475_10120661	3300027018	Soil	IVRKGSIMSVDRTEMNGMFVVEWNRRQKHFHIQALGEILRANLLAAVNGRDSGYVPLAIAQTKEAALEMSNLIEVKLKSLRPLHRVDGSDTLQ
Ga0209818_10492682	3300027637	Agricultural Soil	MAVDINELNGMFVVEWNRRQKHLHIQALGEILKGNLRAVVNGRDSGYVPVAIARTKGEAVEMCRLIDVKLRSLPTRHPVDSADTLQ
Ga0209814_104105251	3300027873	Populus Rhizosphere	MAVDINEINKMFVVEWNAKQKKFHIQTLGEILKSNLLAAVNGRASGYVPVAIAHTEREALEMVKLIEAKLKKLRRAPRVDSSDTLH
Ga0207428_108354622	3300027907	Populus Rhizosphere	VAVDINEMNGMFVVEWNRRQKHFQIQALGEILKSNLLAAINKRDRGYVPVAIANTEGEALKMSKLIEAKLKKLRQTHREDSSDTLH
Ga0209382_114674241	3300027909	Populus Rhizosphere	MAVDINEINKMFVVEWNAKQKKFHIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALKMEKLIEAKLKKLRQAHPVDSSDTLH
Ga0268264_100219593	3300028381	Switchgrass Rhizosphere	MAVNINEMNGMFVVEWNRRKNHFHIEPLGVILKSNLLAAVNGRDSGYVPVAVAETKGEALKMSKLIEVKLESLRPLRRVHSSDTLE
Ga0310884_106575092	3300031944	Soil	MAVDINEMNGMFVVEWNLRKKHFHIQALGEILKANLLAAVNGRDSGYLPFAIAQTEREAVEMSKLIEVKL
Ga0310810_105915191	3300033412	Soil	VALDINEMNAVFVVEWNRKQKHFQIQTLGEILKSNLLAAVNRRASGYVPVAIAHTEREALEIAKLIGAKLKKLSRTDSVDTLH
Ga0334932_004201_1308_1568	3300034174	Sub-Biocrust Soil	MAIDINEMNEMFVVEWSPSHKQFRIRTIRQMLKSNLNAAVHGQGVSQVPVAIAGTEEEALKMSNIIEVKLEKLRQAHRASSSDTLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082898

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences