Metagenome Family F082851

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082851
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	125 residues
Representative Sequence	VSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAELPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMADRLGLRTVDMPREHQSLTSLLHELVS
Number of Associated Samples	90
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.25 %
% of genes near scaffold ends (potentially truncated)	42.48 %
% of genes from short scaffolds (< 2000 bps)	76.99 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (9.735 % of family members)
Environment Ontology (ENVO)	Unclassified (44.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.982 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.56% β-sheet: 15.75% Coil/Unstructured: 50.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
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SCOP family	SCOP domain	Representative PDB	TM-score
c.23.1.0: CheY-like	d2rjna_	2rjn	0.78
c.23.1.0: CheY-like	d2rjna_	2rjn	0.78
c.23.1.1: CheY-like	d1m5ta_	1m5t	0.77
c.23.1.0: CheY-like	d2qv0a_	2qv0	0.77
c.23.1.0: CheY-like	d3hv2a_	3hv2	0.77
c.23.1.0: CheY-like	d6ekgy_	6ekg	0.77
c.23.1.1: CheY-like	d1m5ta_	1m5t	0.77
c.23.1.0: CheY-like	d2qv0a_	2qv0	0.77
c.23.1.0: CheY-like	d3hv2a_	3hv2	0.77
c.23.1.0: CheY-like	d6ekgy_	6ekg	0.77

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF16124	RecQ_Zn_bind	46.02
PF09594	GT87	9.73
PF00271	Helicase_C	3.54
PF02657	SufE	2.65
PF01553	Acyltransferase	1.77
PF00011	HSP20	0.88
PF02566	OsmC	0.88
PF13185	GAF_2	0.88
PF02082	Rrf2	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	2.65
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.88
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.88
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.88
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.88
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.88
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.88
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.88
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.88
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.88
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	84.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	84.07 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	13.27 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	7.08 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	13.27 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.08 %
Perlucidibacaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Perlucidibacaceae	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	13.27 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.08 %
Perlucidibaca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Perlucidibacaceae → Perlucidibaca	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	11.50 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.08 %
Perlucidibaca piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Perlucidibacaceae → Perlucidibaca → Perlucidibaca piscinae	0.88 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	11.50 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.08 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.88 %
Perlucidibaca piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Perlucidibacaceae → Perlucidibaca → Perlucidibaca piscinae	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003324\|soilH2_10093169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1961	Open in IMG/M
3300004156\|Ga0062589_100849858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	833	Open in IMG/M
3300004463\|Ga0063356_100010761	All Organisms → cellular organisms → Bacteria	8213	Open in IMG/M
3300004463\|Ga0063356_100377879	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300004480\|Ga0062592_100026649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2765	Open in IMG/M
3300005327\|Ga0070658_10233844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1557	Open in IMG/M
3300005328\|Ga0070676_10252952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1176	Open in IMG/M
3300005328\|Ga0070676_10912473	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005331\|Ga0070670_101704957	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	580	Open in IMG/M
3300005337\|Ga0070682_101488302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	582	Open in IMG/M
3300005337\|Ga0070682_101596378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	564	Open in IMG/M
3300005345\|Ga0070692_10523836	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	772	Open in IMG/M
3300005347\|Ga0070668_100128723	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300005353\|Ga0070669_100824943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	789	Open in IMG/M
3300005354\|Ga0070675_100103312	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300005354\|Ga0070675_101926135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300005356\|Ga0070674_100053210	All Organisms → cellular organisms → Bacteria	2794	Open in IMG/M
3300005364\|Ga0070673_100716531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	920	Open in IMG/M
3300005455\|Ga0070663_101743062	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005518\|Ga0070699_100493403	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300005535\|Ga0070684_100157610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2059	Open in IMG/M
3300005547\|Ga0070693_101075674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	612	Open in IMG/M
3300005564\|Ga0070664_100094480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2593	Open in IMG/M
3300005564\|Ga0070664_101113357	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005616\|Ga0068852_100022491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5056	Open in IMG/M
3300005616\|Ga0068852_100204909	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300005618\|Ga0068864_102582802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	514	Open in IMG/M
3300005843\|Ga0068860_101182733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	785	Open in IMG/M
3300006028\|Ga0070717_11861697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300006031\|Ga0066651_10081413	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300006046\|Ga0066652_100713973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	955	Open in IMG/M
3300006237\|Ga0097621_100571226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1031	Open in IMG/M
3300006755\|Ga0079222_11862328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Perlucidibacaceae → Perlucidibaca → Perlucidibaca piscinae	585	Open in IMG/M
3300006845\|Ga0075421_101900943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300006876\|Ga0079217_10069669	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300007004\|Ga0079218_10057353	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2457	Open in IMG/M
3300009148\|Ga0105243_10058753	All Organisms → cellular organisms → Bacteria	3066	Open in IMG/M
3300009177\|Ga0105248_11282450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	828	Open in IMG/M
3300009551\|Ga0105238_10770996	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	976	Open in IMG/M
3300009789\|Ga0126307_11528443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300010039\|Ga0126309_10143302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1277	Open in IMG/M
3300010041\|Ga0126312_10657460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	755	Open in IMG/M
3300010041\|Ga0126312_11469897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300010044\|Ga0126310_10654891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	790	Open in IMG/M
3300010045\|Ga0126311_10454617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	995	Open in IMG/M
3300010045\|Ga0126311_11590521	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300010166\|Ga0126306_10075806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2387	Open in IMG/M
3300010166\|Ga0126306_10092405	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2173	Open in IMG/M
3300010166\|Ga0126306_10669956	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	830	Open in IMG/M
3300010397\|Ga0134124_10272030	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1567	Open in IMG/M
3300011431\|Ga0137438_1166594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	676	Open in IMG/M
3300011994\|Ga0120157_1099150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	572	Open in IMG/M
3300012212\|Ga0150985_103802867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300012900\|Ga0157292_10167421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	712	Open in IMG/M
3300012958\|Ga0164299_10123986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1386	Open in IMG/M
3300012986\|Ga0164304_10696080	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	771	Open in IMG/M
3300013100\|Ga0157373_10106470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1972	Open in IMG/M
3300013308\|Ga0157375_10989163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	981	Open in IMG/M
3300015371\|Ga0132258_12696790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1240	Open in IMG/M
3300015371\|Ga0132258_13019653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1166	Open in IMG/M
3300015372\|Ga0132256_100285727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1729	Open in IMG/M
3300015374\|Ga0132255_101269815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1110	Open in IMG/M
3300015374\|Ga0132255_102437267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	799	Open in IMG/M
3300018476\|Ga0190274_10350742	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1403	Open in IMG/M
3300018476\|Ga0190274_12397852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	625	Open in IMG/M
3300019356\|Ga0173481_10454014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	641	Open in IMG/M
3300021445\|Ga0182009_10027194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2244	Open in IMG/M
3300022756\|Ga0222622_10040168	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2571	Open in IMG/M
3300022756\|Ga0222622_10317396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1077	Open in IMG/M
3300023057\|Ga0247797_1075640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300025321\|Ga0207656_10001897	All Organisms → cellular organisms → Bacteria	6955	Open in IMG/M
3300025893\|Ga0207682_10034159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2049	Open in IMG/M
3300025901\|Ga0207688_10796185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300025907\|Ga0207645_10102579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1846	Open in IMG/M
3300025923\|Ga0207681_10226303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1450	Open in IMG/M
3300025925\|Ga0207650_10789500	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	804	Open in IMG/M
3300025930\|Ga0207701_10219535	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1665	Open in IMG/M
3300025931\|Ga0207644_11241523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	626	Open in IMG/M
3300025935\|Ga0207709_10086973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2031	Open in IMG/M
3300025941\|Ga0207711_10295084	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1494	Open in IMG/M
3300025945\|Ga0207679_10091009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2360	Open in IMG/M
3300025960\|Ga0207651_11641228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	579	Open in IMG/M
3300025961\|Ga0207712_11985319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	521	Open in IMG/M
3300026067\|Ga0207678_11378502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	623	Open in IMG/M
3300026067\|Ga0207678_12017315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	502	Open in IMG/M
3300026142\|Ga0207698_10174646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1896	Open in IMG/M
3300026142\|Ga0207698_11594776	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	668	Open in IMG/M
3300027639\|Ga0209387_1039856	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	997	Open in IMG/M
3300028380\|Ga0268265_11578792	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	661	Open in IMG/M
3300028381\|Ga0268264_10354147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1398	Open in IMG/M
3300028768\|Ga0307280_10052075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1281	Open in IMG/M
3300028778\|Ga0307288_10148034	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	882	Open in IMG/M
3300030496\|Ga0268240_10025764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1148	Open in IMG/M
3300031548\|Ga0307408_100087863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2340	Open in IMG/M
3300031731\|Ga0307405_10532460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	947	Open in IMG/M
3300031824\|Ga0307413_10133693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1702	Open in IMG/M
3300031892\|Ga0310893_10400459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300031911\|Ga0307412_11983794	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	538	Open in IMG/M
3300031938\|Ga0308175_100009559	All Organisms → cellular organisms → Bacteria	7203	Open in IMG/M
3300031938\|Ga0308175_100100040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2668	Open in IMG/M
3300031938\|Ga0308175_100139811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2305	Open in IMG/M
3300031938\|Ga0308175_100238633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1817	Open in IMG/M
3300031938\|Ga0308175_101476098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	759	Open in IMG/M
3300031939\|Ga0308174_10011772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5080	Open in IMG/M
3300031995\|Ga0307409_102849989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300031996\|Ga0308176_10011817	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6164	Open in IMG/M
3300031996\|Ga0308176_10858029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	952	Open in IMG/M
3300032002\|Ga0307416_101186244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	869	Open in IMG/M
3300032002\|Ga0307416_101745274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	727	Open in IMG/M
3300032004\|Ga0307414_10748722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	888	Open in IMG/M
3300032075\|Ga0310890_11282485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300033412\|Ga0310810_10001228	All Organisms → cellular organisms → Bacteria	26617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.33%
Environmental	Environmental	48.67%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.33%
Terrestrial	Environmental → Terrestrial	46.02%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.04%
Sediment	Environmental → Aquatic → Sediment	2.65%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.62%
Loam	Environmental → Terrestrial → Soil → Loam	6.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH2_100931694	3300003324	Sugarcane Root And Bulk Soil	VSRDAVLVLSDDPLAAALLGAATELAGYSPRFPLQNEKARTALRRVRPGLVLVDCDHPEACTDEFVGPALMTGSRVLLFRSRRTARDPGEFAGRLGLRVLELPVEHEPLRQLLREVLD*
Ga0062589_1008498582	3300004156	Soil	VSRQAVLVLSSDPLAAALLGAAIELAGHSPRFAQSDETARAALLRVRPRLVLVDCDHEDACSDAFIGPALMTGSRLLLFRSRRTRRDVSELSDRLGLR
Ga0063356_1000107614	3300004463	Arabidopsis Thaliana Rhizosphere	VSRQAVLVLSSDPLAAALLGAAIELAGHSPRFAQSDETARAALLRVRPRLVLVDCDHEDACSDAFIGPALMTGSRLLLFRSRRTRRDVSELSDRLGLRVVDMPMEHEPLTRLLHQMLA*
Ga0063356_1003778793	3300004463	Arabidopsis Thaliana Rhizosphere	MLSLSDDDVRRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVSELSRRLGLRVVEMPMEHEPLTRLLHQMLA*
Ga0062592_1000266495	3300004480	Soil	VSRQAVLVLSSDPLAAALLGAAIELAGHSPRFAQSDETARAALLRVRPRLVLVDCDHEDACSDAFIGPALMTGSRLLLFRSRRTRRDVSELSDRLGLRVVDMPMEHEPLTRLLHQM
Ga0070658_102338442	3300005327	Corn Rhizosphere	MLPPAHGDDGSRNPVLVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTKRDMSELAGRLGLRTVEMPEEHHDLTALLRELVH*
Ga0070676_102529521	3300005328	Miscanthus Rhizosphere	MQPPTHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS*
Ga0070676_109124731	3300005328	Miscanthus Rhizosphere	PLAPPGRYTRHLPRRMLSRTDDDLTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVQELSERLGLRVVEMPMEHEPLTRLLHQMLA*
Ga0070670_1017049571	3300005331	Switchgrass Rhizosphere	VGDARNADPRRDATYVVPLLPDRGSTLVITHDAMLPPAHGDDGSRNPVLVLSSDPLAAALLGAAIELSGLAPRFPQSAESPRNALLRVRPRLVVIDCDHEGACTEAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHDSLKSLLQELVS*
Ga0070682_1014883021	3300005337	Corn Rhizosphere	VVPLLPDRGPTPVPTQDAMQPLAHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQPAESPRNALLRVRPRLVLIDCDHEDACTEGFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS*
Ga0070682_1015963782	3300005337	Corn Rhizosphere	LVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTKRDMSELAGRLGLRTVEMPEEHHDLTALLRELVH*
Ga0070692_105238362	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RNPVLVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHGSLTELLHELVP*
Ga0070668_1001287231	3300005347	Switchgrass Rhizosphere	VSRHAVLVFSSDPLAAALLGAAIELSGYSPLFPRDAEPARDALLRVRPRLTVIDCDHTETCTEAFIGPALMTGSKVLLFRSRRTENDATDLAERLATGGRDAGAARDAHAA
Ga0070669_1008249431	3300005353	Switchgrass Rhizosphere	LAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSGRLGLRVVEMPMEHEPLTRLLHQMLA*
Ga0070675_1001033123	3300005354	Miscanthus Rhizosphere	MLCPSDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVQELSERLGLRVVEMPMEHEPLTRLLHQMLA*
Ga0070675_1019261352	3300005354	Miscanthus Rhizosphere	TPVITHAMQPPAQGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVFIDCDHEDGCSEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS*
Ga0070674_1000532101	3300005356	Miscanthus Rhizosphere	MLSHTDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSARLGLRVVEMPMEHEPLTRLLHQMLA*
Ga0070673_1007165311	3300005364	Switchgrass Rhizosphere	VSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAELPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMADRLGLRTVDMPREHQSLTSLLHELVS*
Ga0070663_1017430622	3300005455	Corn Rhizosphere	AALLGAAIELAGHAPRFAQSGEAARAALLRVRPRIVVIDCDHEDGCSEAFVGPAIMTGSRVLLFRSRRTRRDVSELCERLGLHVMDVPIDLDPLARLLHQVIA*
Ga0070699_1004934032	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSRAAVLVLSSDPLSAALLGAAIELAGHAPRFQQPDEQPRAALLRVRPRLVVVDCDHEDACSEAFVGPALMTGSRVLLFRSRRTRRDMSELAERLGLRIVEMPMEHESLARLLDELIA*
Ga0070684_1001576101	3300005535	Corn Rhizosphere	HRRSPGCNKCGPPLACPGPTLVITLDAMLPPAHGDDGSRNPVLVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTKRDMSELAGRLGLRTVEMPEEHHDLTALLRELVH*
Ga0070693_1010756742	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	KGEPSACRVVPLLLRPGPTPVISLDAMLPPVPDDVPSRLPVLVLSPDPLSAALLGAAIELAGHAPRFAQSGEAARAALLRVRPRIVVIDCDHEDGCSEAFVGPAIMTGSRVLLFRSRRTRRDVSELCERLGLHVMDVPIDLDPLARLLHQVIA*
Ga0070664_1000944803	3300005564	Corn Rhizosphere	MAASLTGPLRGARYVVPVLPNRAPTPVITHAMQPPAQGDDVSRSPVLVLSSDPLAAALLGAAIELSGLAPRFPQSAESPRNALLRVRPRLVVIDCDHEDACTEAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHDSLKSLLQELVS*
Ga0070664_1011133572	3300005564	Corn Rhizosphere	YTRHLPRRMLSHTDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSARLGLRVVEMPMEHEPLTRLLHQMLA*
Ga0068852_1000224912	3300005616	Corn Rhizosphere	VVPLLPDRGPTPVPTQDAMQPLAHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS*
Ga0068852_1002049092	3300005616	Corn Rhizosphere	MRHAVLVLSSDPLAAALLGAAIELAGHSPHFPQPDESARNALLRVRPRLVVVDCDHEEACAEGFIGPALMTGSQVLLFRSRRTRRDTGDLGARLGVKTMEMPAEQETLTRLLSELMA*
Ga0068864_1025828021	3300005618	Switchgrass Rhizosphere	RNPVLVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTKRDMSELAGRLGLRTVEMPEEHHDLTALLRELVH*
Ga0068860_1011827331	3300005843	Switchgrass Rhizosphere	SRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS*
Ga0070717_118616971	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AAALLGAAIELTGLAPRFPNSGESPRSALLRARPRLVVIDCDHEDGCSEAFIGPALMTGSQVVLFRSRRTRRDVSEMAGRLGLRTVEMPQEHRELTSLLQELVS*
Ga0066651_100814132	3300006031	Soil	MVPLLRRPGSAPVISPHACCPAPDDDVSREPVLVLSSDPLAAALLGAAIELAGHAPRFPQSDEAARDALLRLRPRLVLVDCDHDACSDEFIGPALTEGSRVLLFRSRRTRRDVRELTERLGLRVVEMPTEHETLTPLLDEMLH*
Ga0066652_1007139732	3300006046	Soil	VSSSAVLVLSSDPLAAALLGAVIELQGRTPQFPQADESPRAALLRVRPHMVVVDCDHEDGCSESFIGPALMTGSQVILFRSRRTRRDVSEMAHRFGLRTIGMPDEHESLMSLLHDLVP*
Ga0097621_1005712261	3300006237	Miscanthus Rhizosphere	VLVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTKRDMSELAGRLGLRTVEMPEEHHDLTALLRELVH*
Ga0079222_118623281	3300006755	Agricultural Soil	EARADGGASSAGNECLSAPLLSQGARIARERRWVVLLLRPSRPHPSSPNDVMLPPVHDDDVRRVPVLVLSSDPLAAALLGAAIELAGYEPRFPDSSESARTALLRARPRLVVVDCDHEEGCSDAFIGPALMTGSRVLLFRSTRTKRDVSELSARIGLRVAEMPMAHEPLTRLLRQMLA*
Ga0075421_1019009432	3300006845	Populus Rhizosphere	AAIELAGHAPRFPHAEEAARAALRRVRPRLVIIDCDHEDACSESFIGPALMTGSRVLLVRSRRTRRDVSELTGRLGLRVAEMPMEHEPLTRLLNQMLA*
Ga0079217_100696692	3300006876	Agricultural Soil	VSRHAVLVLSSDPLAAALLGAAIELAGHVPRFPQSDEAARMALLRIRPRLVVIDCDHEDGCSDAFIGPALMTGSRVLLFRSRRTQRDVTELTGRLGLRVMDMPMEHESLTRELHRSLA*
Ga0079218_100573532	3300007004	Agricultural Soil	VRAASRLVPLLLRPGPIPVISHDAMLSRLDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHADEAPRAALLRVRPRLVVIDCDHVDACSDSFIGPALMTGSRVLLVRSRRTRRDVSELSRRLELRVAEMPMEHEPLTRLLHQMLV*
Ga0105243_100587534	3300009148	Miscanthus Rhizosphere	MQPPAQGNDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAGSPRNALLRVRPRLVFIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHGSLTELLHELVP*
Ga0105248_112824501	3300009177	Switchgrass Rhizosphere	SDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS*
Ga0105238_107709962	3300009551	Corn Rhizosphere	AALLGAAIELAGLAPRFAQFGESARNALLRTRPRLVLVDCDHEDACSDAFVGPALMTGSQVVLFRSRRTRRDVTDLADRLGLRTVEMPQEHGSLTSLLHELVQ*
Ga0126307_115284431	3300009789	Serpentine Soil	VSRHSILVLSSDPLAAALLGAAIELSGHAPRFAQADEAARAALLRVRPRLVVIDCDEEDACSEAFIGPALMTGSRVMLFRSRRTRRDPSELVTRMGLRVVEMPIEHDSLSAVLHEMLV
Ga0126309_101433023	3300010039	Serpentine Soil	VSRQTILVLSSDPLAAALLGAAIELSGQAPRFPRSEEAARDALLRVRPRLVVIDCDHADACSESFIGPALMTGSRVILFRSRRSRNDVSELSTRLGLRVVEMPVEHESLSELFRELLD*
Ga0126312_106574601	3300010041	Serpentine Soil	VSRHAILVLSSDPLAAALLGAAIELSGHAPRYPQPEEAARASLLRVRPALVIIDCDHEDACSEAFIGPALMTGSRVMLFRSRRTRRDVSELSTRLGLRVLEMPMEHDSLSSLLREMLV*
Ga0126312_114698972	3300010041	Serpentine Soil	ASGLDDDVSRQTILVLSSDPLAAALLGAAIELSGQAPRFPRSEEAARDALLRVRPRLVVIDCDHADACSESFIGPALMTGSRVILFRSRRSRNDVSELSTRLGLRVVEMPVEHESLSELFRELLD*
Ga0126310_106548911	3300010044	Serpentine Soil	SDPLTAALLGAAIELSGHAPRFVQSDEGARAALLRVRPRLVVVDCDHEEACSEAFIGPALMSGSRVMLFHSRRSHRDVSELSMRLGLRVVEMPVEHDSLTALLGEMLD*
Ga0126311_104546172	3300010045	Serpentine Soil	VNRHPVLVLSSDPLAAALLGAAIELAGHAPRFAQSNEAARAALLRVRPRLVVIDCDHEDACSESFIGPALMTGSRVMLFRSRRTRRDVTELTGRLDLTVVDMPMEHDSLTGVLHRLLM*
Ga0126311_115905212	3300010045	Serpentine Soil	HSILVLSSDPLTAALLGAAIELSGHAPRFVQSDEGARAALLRVRPRLVVVDCDHEEACSEAFIGPALMSGSRVMLFHSRRSHRDVSELSMRLGLRVVEMPVEHDSLTALLGEMLD*
Ga0126306_100758062	3300010166	Serpentine Soil	VSRHSILVLSSDPLAAALVGAAIELSGHSPRFAQSEEAARAALLRVRPSLVVIDCDHVEACSEEFIGPALMTNSRVMLIRSRRTRHDVSGLATRLGLRVVEMPIEHDSLSDVLREMLV*
Ga0126306_100924053	3300010166	Serpentine Soil	MLPPGLDDDVSRHSILVLSSDPLAAALLGAAIELSGHAPRFAQADEAARAALLRVRPTLVVIDCDDEDTCCDAFIGPALMTGSRVMLFRSRRTRRDPSELATRLELRVVEMPIEHDSLSAVLREMLV*
Ga0126306_106699561	3300010166	Serpentine Soil	MDPLSAALLAAAIELAGHVPSFLHGDETPRDALRRVRPRLVVVDCDHVDACSDAFIGPALMTGSKVLLFKSRRTQHDASELAERLGLTVVDMPSKHETLTQVLRE
Ga0134124_102720302	3300010397	Terrestrial Soil	MQPPAHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS*
Ga0137438_11665942	3300011431	Soil	VSRQPVLVLSPDPLSAALLGAAIELAGHSPRFPQSDEPPRSALMRTRPRLVVVDCDHEDACSEGFVGPALMTGSRVLLFRSRRTRRDMGELSQRLGLTVVDMPMAHESLTRLLQEMIA*
Ga0120157_10991501	3300011994	Permafrost	VTRHAVLVFSSDALAAALIGAAIELAGHAPHFSQTDESARNALLRVRPRLVVVDCDHEEACSEAFVGPALMTGSELLLFRSRRTRRDIGDLAERLGVRVVELPGEHERLMRILQELLA*
Ga0150985_1038028671	3300012212	Avena Fatua Rhizosphere	PRRNAASGLDDDVSRHAVLVLSSDPLAAALLGASIELAGYSPMFPQDSEAAREALLRVRPRLTVIDCDHAEACSESFIGPAIMTGSRVLLFRSRRTENDASELATRLSLQIVDMPTRHEALTLLLRELVA*
Ga0157292_101674212	3300012900	Soil	LSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSGRLGLRVVEMPMEHEPLTQLLHQMLA*
Ga0164299_101239861	3300012958	Soil	MQPPAQGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVFIDCDHEDGCSDAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHGSLTELLHELVP*
Ga0164304_106960801	3300012986	Soil	MLPPAHGDDGSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVFIDCDHEDGCSDAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHGSLTELLHELVP*
Ga0157373_101064703	3300013100	Corn Rhizosphere	MLPPAHGDDGSRNPVLVLSSDPLAAALLGAAIELAGLAPRFAQSAETPRNALMRVRPRLVLIGCEHEEACAEAFVGPALMTGSQVVLFRSRRTRRDVSEMAGRLGVRTVEMPHEHGSLTALLHELVS*
Ga0157375_109891631	3300013308	Miscanthus Rhizosphere	MLSPTDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIACDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSARLGLRVVEMPMEHEPLTRLLHQMLA*
Ga0132258_126967903	3300015371	Arabidopsis Rhizosphere	MLSPAHGDDGSRKPVLVLSSDPLAAALLGAAIELAGLAPRFPKLGESPRSALMRMRPSLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTQRDMSEMAGRLGLRTVEMPQEHHELTALLRELVRQ*
Ga0132258_130196533	3300015371	Arabidopsis Rhizosphere	MQPPAQGDDVSRSPVLVLSSDPLAAALLGAAIELSGLAPRFPQSAESPRNALLRVRPRLVVIDCDHEDACTEAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHDSLKSLLQELVS*
Ga0132256_1002857272	3300015372	Arabidopsis Rhizosphere	MQPQAFGGDVSGSAVLVLSSDPLAAALLGAMVELQGHTPAFLQADESPRTALLRVRPQMVVVDCDDENGCSESFIGPAMMTGSRGVLFRSQRTRRDVSEMADRFGLRTVGMPHEQESLTSLLHDLAS*
Ga0132255_1012698151	3300015374	Arabidopsis Rhizosphere	VSRHAVLVFSSDPLAAALLGAAIELAGYSPLFPQGSEAAREALLRVRPRLTVIDCDHAEACTEAFIGPALMTGSRVLLFRSRRTENDATEMAERLGLQIVDMPTRHETLTQILRELVA*
Ga0132255_1024372671	3300015374	Arabidopsis Rhizosphere	MLSPAHGDDGSRKPVLVLSSDPLAAALLGAAIELAGLAPRFPKLGESPRSALMRMRPSLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTQRDMSEMAGRLGLRTVEMPQEHHELTALLQELVS*
Ga0190274_103507422	3300018476	Soil	LVSLLLRGGPTPVISYDAMLSRPDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHADEAPRNALLRVRPRLVIIDCDHADACSDSFIGPALMTGSRVLLVRSRRTRRDVSELSKRLDLRVVEMPMEHEPLTRLLHQMLA
Ga0190274_123978521	3300018476	Soil	LVGAAIELAGHAPRFPKADEAARSALLRVRPRLVIIDCDHEDACSDSFIGPALMTGSRVLLIRSRRTRRDASELSGRLGLRVLEMPMEHEPLTRLLHQMLA
Ga0173481_104540142	3300019356	Soil	MLSPTDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSGRLGLRVVEMPMEHEPLTRLLHQMLA
Ga0182009_100271942	3300021445	Soil	MLPPVQDDDQRRAPVLVLSSDPLAAALLGAAIELAGYAPRFPQTKEAARTALLRARPRLVVIDCDHEEACSDAFIGPALMTGSRVLLFRSRRTTRDVSELSGRLGLRIAEMPMDHEPLSQLLRQMFD
Ga0222622_100401681	3300022756	Groundwater Sediment	MLSHTDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSARLGLRVVEMPMEHEPLTRLLHQMLA
Ga0222622_103173961	3300022756	Groundwater Sediment	DDVTRLPVLVLSSDPLAAALVGAAIELAGHAPRFPKSDEAARSALLRVRPRLVIIDCDHEDACTDSFIGPALMTGSRVLLIRSRRTRRDASELSGRLGLRVLEMPMEHEPLTRLLHQMLA
Ga0247797_10756401	3300023057	Soil	APPGRYTRHLPRRMLSRTDDDLTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSGRLGLRVVEMPMEHEPLTRLLHQMLA
Ga0207656_100018972	3300025321	Corn Rhizosphere	MLPPAHGDDGSRNPVLVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTKRDMSELAGRLGLRTVEMPEEHHDLTALLRELVH
Ga0207682_100341592	3300025893	Miscanthus Rhizosphere	MLCPSDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVQELSERLGLRVVEMPMEHEPLTRLLHQMLA
Ga0207688_107961852	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	PPLAAPGRYTRHLPRRMLCPSDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVQELSERLGLRVVEMPMEHEPLTRLLHQMLA
Ga0207645_101025792	3300025907	Miscanthus Rhizosphere	MQPPTHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS
Ga0207681_102263032	3300025923	Switchgrass Rhizosphere	MLSHTDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSGRLGLRVVEMPMEHEPLTRLLHQMLA
Ga0207650_107895001	3300025925	Switchgrass Rhizosphere	MRDTWSSSCSHECHTRHPRPDAASGLDDDVSRHAVLVFSSDPLAAALLGAAIELAGYSPMFPHDAEAAREALLRVRPRLTVIDCDHAETCSEGFIGPALMTGSRVLLFRSRRTENDASELADRLGLQVVEMPARHEALTLLLRELVA
Ga0207701_102195352	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLSDDDVRRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSGRLGLRVVEMPMEHEPLTRLLHQMLA
Ga0207644_112415232	3300025931	Switchgrass Rhizosphere	PGPTLVITLDAMLPPAHGDDGSRNPVLVLSSDPLAAALLGAAIELAGLAPRYPKLGELPRNALMRVRPRLVVIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTKRDMSELAGRLGLRTVEMPEEHHDLTALLRELVH
Ga0207709_100869732	3300025935	Miscanthus Rhizosphere	MTGPLPVARYVVPLLPNRAPTPVITHAMQPPAQGNDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAGSPRNALLRVRPRLVFIDCDHEDGCSEAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHGSLTELLHELVP
Ga0207711_102950842	3300025941	Switchgrass Rhizosphere	MQPPTHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREYQSLTSLLHELVS
Ga0207679_100910091	3300025945	Corn Rhizosphere	MAASLTGPLRGARYVVPVLPNRAPTPVITHAMQPPAQGDDVSRSPVLVLSSDPLAAALLGAAIELSGLAPRFPQSAESPRNALLRVRPRLVVIDCDHEDACTEAFVGPALMTGSQVVLFRSRRTQRDVSEMADRLGLRTVDMPREHDSLKSLLQELVS
Ga0207651_116412282	3300025960	Switchgrass Rhizosphere	AAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVGELSARLGLRVVEMPMEHEPLTRLLHQMLA
Ga0207712_119853192	3300025961	Switchgrass Rhizosphere	LGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS
Ga0207678_113785022	3300026067	Corn Rhizosphere	VLSPDPLSAALLGAAIELAGHAPRFAQSGEAARAALLRVRPRIVVIDCDHEDGCSEAFVGPAIMTGSRVLLFRSRRTRRDVSELCERLGLHVMDVPIDLDPLARLLHQVIA
Ga0207678_120173151	3300026067	Corn Rhizosphere	GPTPVPTQDAMQPLAHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEGFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS
Ga0207698_101746462	3300026142	Corn Rhizosphere	MRHAVLVLSSDPLAAALLGAAIELAGHSPHFPQPDESARNALLRVRPRLVVVDCDHEEACAEGFIGPALMTGSQVLLFRSRRTRRDTGDLGARLGVKTMEMPAEQETLTRLLSELMA
Ga0207698_115947762	3300026142	Corn Rhizosphere	DRGPTPVPTQDAMQPLAHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS
Ga0209387_10398562	3300027639	Agricultural Soil	VSRHAVLVLSSDPLAAALLGAAIELAGHVPRFPQSDEAARMALLRIRPRLVVIDCDHEDGCSDAFIGPALMTGSRVLLFRSRRTQRDVTELTGRLGLRVMDMPMEHESLTRELHRSLA
Ga0268265_115787922	3300028380	Switchgrass Rhizosphere	VYGLTPDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRAVDMPREHQSLTSLLHELVS
Ga0268264_103541472	3300028381	Switchgrass Rhizosphere	VVPLLPDRGPTPVPTQDAMQPPTHGDDVSRSPVLVLSSDPLAAALLGAAIELAGLAPRFPQSAESPRNALLRVRPRLVLIDCDHEDACTEAFVGPALMTGSQVLLFRSRRTRRDVSEMVDRLGLRTVDMPREHQSLTSLLHELVS
Ga0307280_100520752	3300028768	Soil	MLQPGLDEEARRQPVLVLSKDTLTAALIGAAIELAGFAPRFPQSDELPRAALLRVRPRLVVVDCDHEDACSDGFIGPAIMTGSRVLLFRSRRTRRDVSELTQRLGVQVMEMPIEHEPLTRLLRQMLD
Ga0307288_101480341	3300028778	Soil	AAALLGAAIELSGQAPRFPRSEEAARDALLRVRPRLVVIDCDHADACSESFIGPALMTGSRVILFRSRRSRNDVSELSTRLGLRVVEMPVEHESLSELFRELLD
Ga0268240_100257641	3300030496	Soil	LRRAPVLVLSSDPLAGALLGAAIELAGYAPRFPHSSEPARTALLRARPRLVVVDCDHDEACSDAFIGPALMTGSRVLLFRSRRTKRDVSELSTRLGLRIAEMPIDHEPLSQLLRQMFD
Ga0307408_1000878634	3300031548	Rhizosphere	VSRQPVLVLSSDPLAAALLGAAIELAGHAPRFPQPEEAARAALLRIRPRLVVIDCDHEEGCSDAFIGPALMTGSRVLLFRSRRTRRDVTELTGRLGLPVMHIPTEHESLAQVLHRVMA
Ga0307405_105324602	3300031731	Rhizosphere	VSRQPVLVLSSDPLAAALLGAAIELAGLAPRFPQSEEAARAALLRVRPRLVVIDCDHVEGCSDAFIGPALMTGSRVLLFRSRRTRRDVTDLTGRLGLPVMDIPMEHESLARVLHRVLA
Ga0307413_101336934	3300031824	Rhizosphere	VSRQPVLVLSSDPLAAALLGAAIELAGLAPRFPQSEEAARAALLRVRPRLVVIDCDHVEGCSDAFIGPALMTGSRVLLFRSRRTRRDVTELTGRLGLPVMDIPMEHESLARVLHRVLA
Ga0310893_104004591	3300031892	Soil	GPVSQGAGFAQTTGRLVPLLLRRGPTPVISYVAMLSRPDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAPRSALLRVRPRLVIIDCDHADACSDSFIGPALMTGSRVLLVRSRRTRRDVSELSGRLGLRVVEMPMEHEPLTRLLHQMLA
Ga0307412_119837942	3300031911	Rhizosphere	AAVLLGAAIDLAGYAPRFPTSSESPRTALLRARPRLVVVDCDHEEACSDAFIGAALMTGSRVLLFRSPRTSRDVSELSARIGLRVAEMPMGHEPLRELLRQMLA
Ga0308175_1000095599	3300031938	Soil	VNRRSVLVFSSDPLAAALLGAAIELAGQAPFFPQTDESARDALLRVRPRLAIIDCDHGEACSDTFIGPALMTGSRVLLLRSRRTQRDARELAQRLGLPVVDMSSGLEALTRMLRELTT
Ga0308175_1001000403	3300031938	Soil	MQPPAQGDDGSRTPVLVLSSDPLAAALLGAAVELAGLAPRFPQPAEPPRNALLRVRPRLVVVDCDHEEACTEAFVGPALMTGSRVVLFRSRRTRRDVSEMADRLGLRTVEMPQEHGSLTSLLHELVP
Ga0308175_1001398113	3300031938	Soil	MLQLGPDDEVRRQPVLVLSQDTLAAALIGAAIELAGFAPRFPHSDEAPRAALLRVRPRLVVVDCDHEDACSDAFIGPALMTGSRVLLFKSRRTRRDMSELTERLGLRVMEMPIEHESMTQLLHQMLV
Ga0308175_1002386332	3300031938	Soil	MLPPVKDDDPRSVRVLVLSSDPLASALLGAAIELAGYAPDFPHTSEPARVALLRARPRLVVVDCDHEEGCSDAFVGPALMTGSRVLLFRSRRTKRDATELSTRLGLRVAEMPMDHGALSRLLHGMLD
Ga0308175_1005539892	3300031938	Soil	IELAGYAPRFPYATEAPRTALLRARPRLVVVDCDHEEACSDAFIGPALMTGSRVLLFRSPRTKRDVTELSTRIGLRVAEMPMEHEPLSQLLRQMVD
Ga0308175_1014760982	3300031938	Soil	HLGQDDEVRRHPVLVLSQDPLAAALIGAAIELAGFAPRFPHSDETPRAALLRVRPRLVVVDCDHEDACSDGFIGPALMTGSRVLLFKSRRTRRDVSELTGRLGLRVMEMPIEHEPLTQLLHQMLD
Ga0308174_100117724	3300031939	Soil	MLQLGLEDEARRQPVLVLSTDPLAAALIGAAIELAGFAPRFPHSDEPPRAALLRVRPRLVVVDCDHEDACSDGFIGPALMTGSRVLLFRSRRTRRDVSELTKRLGLRVMEMPIEHEPLTRLLHQILD
Ga0307409_1028499892	3300031995	Rhizosphere	MLPHGPDDVKRVPVLVLSSDLLAAVLLGAAIDLAGYAPRFPTSSESPRTALLRARPRLVVVDCDHEEACSDAFIGAALMTGSRVLLFRSPRTSRDVSELSARIGLRVAEMPMGHEPLRELLRQMLA
Ga0308176_100118179	3300031996	Soil	VNRRSVLVFSSDPLAAALLGAAIELAGQAPFFPQTDESARDALLRVRPRLAIIDCDHGEACSDTFIGPALMTGSRVLLLRSRRTQRDARELAQRLGLPVVDMSSGLEALTR
Ga0308176_108580292	3300031996	Soil	MLQLGLEDEARRQPVLVLSTDPLAAALIGAAIELAGFAPRFPHSDEAPRAALLRVRPRLVVVDCDHEDACSDGFIGPALMTGSRVLLFKSRRTRRDVSELTGRLGLRVMEMPIEHEPLTQLLHQMLD
Ga0307416_1011862442	3300032002	Rhizosphere	VNRHPVLVLSSDPLASALLGAAIELAGHAPRFPESQEAARAALLRIRPRLVMIDCDHEDGCSDAFIGPALMAGSRVLLFKSRRTRRDVTELTGRLGVHVIDMPMEHGSLTHLL
Ga0307416_1017452741	3300032002	Rhizosphere	TCRGGDECLRDGRVSQGPGFARATGRLVPLLLRPGPTPVISYDAMLSRLDDDVTRVPVLVLSSDPLAAALVGAAIELAGHAPRFPHADEAPRSALLRVRPRLVVIDCDHADACSDSFIGPALMTGSRVLLVRSRRTRRDVSELSGRLGLRVAEMPMEHEPLTRLLHQMLA
Ga0307414_107487222	3300032004	Rhizosphere	VSRQPVLVLSSDPLAAALLGAAIELAGHAPRFPQPEEAARAALLRIRPRLVVIDCDHEEGCSDAFIGPALMTGSRVLLFKSRRTRRDVSELTGRLGLPVMHIPTEHESLAQVLHRVMA
Ga0310890_112824851	3300032075	Soil	VLVLSSDPLAAALVGAAIELAGHAPRFPHAEEAARAALLRVRPRLVVIDCDHEDACSDSFIGPALMTGSRVLLVRSRRTRRDVSELSRRLGLRVVEMPMEHEPLTRLLNQMLA
Ga0310810_100012287	3300033412	Soil	VSSEAILVLSDDPFSAALLGAATELAGYTPRFPLPDEPVRTALRRVRPRLVLVDCDHADACSDEFVGPAIMTGSRVLLFRSRRTARDPGEFAERLGLRVLDLPVEHEPLSRVLREMLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082851

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences