Metagenome Family F082835

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082835
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	115 residues
Representative Sequence	MKTVNALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Number of Associated Samples	92
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.24 %
% of genes near scaffold ends (potentially truncated)	36.28 %
% of genes from short scaffolds (< 2000 bps)	82.30 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (72.566 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.699 % of family members)
Environment Ontology (ENVO)	Unclassified (53.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.24% β-sheet: 19.72% Coil/Unstructured: 57.04%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04268	SoxG	7.96
PF06441	EHN	1.77
PF08669	GCV_T_C	1.77
PF01261	AP_endonuc_2	1.77
PF02518	HATPase_c	1.77
PF00141	peroxidase	0.88
PF07366	SnoaL	0.88
PF01266	DAO	0.88
PF03682	UPF0158	0.88
PF08241	Methyltransf_11	0.88
PF12704	MacB_PCD	0.88
PF14534	DUF4440	0.88
PF02321	OEP	0.88
PF03631	Virul_fac_BrkB	0.88
PF08327	AHSA1	0.88
PF04087	DUF389	0.88
PF05199	GMC_oxred_C	0.88
PF01609	DDE_Tnp_1	0.88
PF04434	SWIM	0.88
PF00156	Pribosyltran	0.88
PF00903	Glyoxalase	0.88
PF12680	SnoaL_2	0.88
PF05532	CsbD	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG4583	Sarcosine oxidase gamma subunit	Amino acid transport and metabolism [E]	7.96
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.77
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.77
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.88
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.88
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.88
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.88
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.88
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.88
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.88
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.88
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.88
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.88
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.88
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.88
COG1808	Uncharacterized membrane protein AF0785, contains DUF389 domain	Function unknown [S]	0.88
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.57 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.57 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.57 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	56.64 %
Unclassified	root	N/A	27.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	55.75 %
Unclassified	root	N/A	27.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	55.75 %
Unclassified	root	N/A	27.43 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	5.31 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	5.31 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	2.65 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.77 %
Neisseriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae	0.88 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.88 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	5.31 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	5.31 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	2.65 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.77 %
Neisseria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria	0.88 %
Pseudooceanicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola	0.88 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	5.31 %
Spirosomaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	3.54 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2.65 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.77 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.88 %
unclassified Neisseria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → unclassified Neisseria	0.88 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	5.31 %
Pseudarcicella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Pseudarcicella	3.54 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2.65 %
Neisseria sp. GT4A_CT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → unclassified Neisseria → Neisseria sp. GT4A_CT1	0.88 %
Mucilaginibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	0.88 %
Myroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Myroides	0.88 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	5.31 %
Pseudarcicella hirudinis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Pseudarcicella → Pseudarcicella hirudinis	3.54 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2.65 %
Myroides odoratimimus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Myroides → Myroides odoratimimus	0.88 %
Mucilaginibacter mallensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter mallensis	0.88 %
Neisseria sp. GT4A_CT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → unclassified Neisseria → Neisseria sp. GT4A_CT1	0.88 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1072272	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	988	Open in IMG/M
3300000891\|JGI10214J12806_12857869	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	603	Open in IMG/M
3300002089\|JGI24810J26611_10023	All Organisms → cellular organisms → Bacteria	9029	Open in IMG/M
3300002099\|JGI24808J26613_1041798	Not Available	630	Open in IMG/M
3300002100\|JGI24809J26612_1005722	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	3247	Open in IMG/M
3300003278\|U2draft_1000528	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	45520	Open in IMG/M
3300004047\|Ga0055499_10082836	Not Available	569	Open in IMG/M
3300004156\|Ga0062589_101798797	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	615	Open in IMG/M
3300004463\|Ga0063356_100001665	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	17475	Open in IMG/M
3300004463\|Ga0063356_103212214	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	704	Open in IMG/M
3300004480\|Ga0062592_100972791	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	773	Open in IMG/M
3300005093\|Ga0062594_100287656	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1238	Open in IMG/M
3300005290\|Ga0065712_10247442	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	962	Open in IMG/M
3300005295\|Ga0065707_11029183	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	532	Open in IMG/M
3300005328\|Ga0070676_11563646	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Myroides → Myroides odoratimimus	509	Open in IMG/M
3300005331\|Ga0070670_100552850	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005334\|Ga0068869_100079694	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300005334\|Ga0068869_100173809	Not Available	1685	Open in IMG/M
3300005340\|Ga0070689_100135257	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1979	Open in IMG/M
3300005340\|Ga0070689_102006079	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005347\|Ga0070668_100399951	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Pseudarcicella → Pseudarcicella hirudinis	1172	Open in IMG/M
3300005347\|Ga0070668_101213551	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005367\|Ga0070667_100095435	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2564	Open in IMG/M
3300005440\|Ga0070705_101883759	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	509	Open in IMG/M
3300005457\|Ga0070662_100780460	Not Available	812	Open in IMG/M
3300005459\|Ga0068867_100403280	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1154	Open in IMG/M
3300005471\|Ga0070698_100209629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	1884	Open in IMG/M
3300005543\|Ga0070672_101169095	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005543\|Ga0070672_101642353	Not Available	577	Open in IMG/M
3300005577\|Ga0068857_101008730	Not Available	801	Open in IMG/M
3300005617\|Ga0068859_100216790	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2001	Open in IMG/M
3300005718\|Ga0068866_10801295	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	655	Open in IMG/M
3300005719\|Ga0068861_100076269	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Pseudarcicella → Pseudarcicella hirudinis	2612	Open in IMG/M
3300005843\|Ga0068860_101860287	Not Available	624	Open in IMG/M
3300006237\|Ga0097621_101546442	Not Available	630	Open in IMG/M
3300006358\|Ga0068871_102004252	Not Available	551	Open in IMG/M
3300006791\|Ga0066653_10316433	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	786	Open in IMG/M
3300006844\|Ga0075428_101152611	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	818	Open in IMG/M
3300006844\|Ga0075428_102227096	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	565	Open in IMG/M
3300006876\|Ga0079217_10427395	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	794	Open in IMG/M
3300006894\|Ga0079215_10911101	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	632	Open in IMG/M
3300006918\|Ga0079216_10358719	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	894	Open in IMG/M
3300009100\|Ga0075418_11126074	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	850	Open in IMG/M
3300009101\|Ga0105247_11041838	Not Available	642	Open in IMG/M
3300009176\|Ga0105242_10194317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1798	Open in IMG/M
3300009553\|Ga0105249_10189345	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300009553\|Ga0105249_11024879	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	894	Open in IMG/M
3300009553\|Ga0105249_11059355	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300009678\|Ga0105252_10323578	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	693	Open in IMG/M
3300010400\|Ga0134122_11074826	Not Available	795	Open in IMG/M
3300010400\|Ga0134122_12582964	Not Available	558	Open in IMG/M
3300011440\|Ga0137433_1115270	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	848	Open in IMG/M
3300012172\|Ga0137320_1010801	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1768	Open in IMG/M
3300012226\|Ga0137447_1128568	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	515	Open in IMG/M
3300012893\|Ga0157284_10041949	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1007	Open in IMG/M
3300012906\|Ga0157295_10201401	Not Available	635	Open in IMG/M
3300014326\|Ga0157380_10512242	Not Available	1168	Open in IMG/M
3300015200\|Ga0173480_10527898	Not Available	712	Open in IMG/M
3300015371\|Ga0132258_12119614	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1413	Open in IMG/M
3300017792\|Ga0163161_11118672	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	678	Open in IMG/M
3300018067\|Ga0184611_1139978	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter mallensis	855	Open in IMG/M
3300018084\|Ga0184629_10346318	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	782	Open in IMG/M
3300018429\|Ga0190272_10064627	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300018429\|Ga0190272_10079662	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2022	Open in IMG/M
3300018429\|Ga0190272_10182084	Not Available	1494	Open in IMG/M
3300018429\|Ga0190272_12788773	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	538	Open in IMG/M
3300018429\|Ga0190272_13110992	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	515	Open in IMG/M
3300018469\|Ga0190270_11765746	Not Available	673	Open in IMG/M
3300018476\|Ga0190274_11167488	Not Available	852	Open in IMG/M
3300018476\|Ga0190274_12931349	Not Available	572	Open in IMG/M
3300019458\|Ga0187892_10008396	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	14162	Open in IMG/M
3300019487\|Ga0187893_10019166	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8685	Open in IMG/M
3300019874\|Ga0193744_1007317	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2020	Open in IMG/M
3300020000\|Ga0193692_1127262	Not Available	509	Open in IMG/M
3300022880\|Ga0247792_1073245	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	672	Open in IMG/M
3300022892\|Ga0247753_1028276	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	658	Open in IMG/M
3300025119\|Ga0209126_1062828	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1077	Open in IMG/M
3300025899\|Ga0207642_10654203	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	659	Open in IMG/M
3300025907\|Ga0207645_10438267	Not Available	881	Open in IMG/M
3300025923\|Ga0207681_10022474	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4023	Open in IMG/M
3300025925\|Ga0207650_10229423	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300025933\|Ga0207706_11163770	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	642	Open in IMG/M
3300025934\|Ga0207686_10401936	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1044	Open in IMG/M
3300025937\|Ga0207669_10610213	Not Available	888	Open in IMG/M
3300025940\|Ga0207691_10270064	Not Available	1464	Open in IMG/M
3300025942\|Ga0207689_10004825	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	12161	Open in IMG/M
3300025942\|Ga0207689_10028527	All Organisms → cellular organisms → Bacteria	4670	Open in IMG/M
3300025961\|Ga0207712_10460502	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300025961\|Ga0207712_10610729	Not Available	944	Open in IMG/M
3300025961\|Ga0207712_10980267	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	749	Open in IMG/M
3300025972\|Ga0207668_11013406	Not Available	742	Open in IMG/M
3300025981\|Ga0207640_11081548	Not Available	709	Open in IMG/M
3300026035\|Ga0207703_10428074	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300026075\|Ga0207708_10088607	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2384	Open in IMG/M
3300026089\|Ga0207648_10429400	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Pseudarcicella → Pseudarcicella hirudinis	1201	Open in IMG/M
3300026116\|Ga0207674_10995622	Not Available	807	Open in IMG/M
3300026118\|Ga0207675_100201024	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Pseudarcicella → Pseudarcicella hirudinis	1914	Open in IMG/M
3300027870\|Ga0209023_10594361	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	651	Open in IMG/M
3300028381\|Ga0268264_12172434	Not Available	563	Open in IMG/M
3300031716\|Ga0310813_10681405	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	916	Open in IMG/M
3300031740\|Ga0307468_100926796	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	758	Open in IMG/M
3300031854\|Ga0310904_10421026	Not Available	879	Open in IMG/M
3300031892\|Ga0310893_10209073	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	791	Open in IMG/M
3300031908\|Ga0310900_10460342	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	980	Open in IMG/M
3300031908\|Ga0310900_11738867	Not Available	530	Open in IMG/M
3300032004\|Ga0307414_10178138	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1707	Open in IMG/M
3300032144\|Ga0315910_10082517	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300032144\|Ga0315910_10193750	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1523	Open in IMG/M
3300032157\|Ga0315912_10136333	All Organisms → cellular organisms → Bacteria → FCB group	1923	Open in IMG/M
3300032157\|Ga0315912_10389442	Not Available	1103	Open in IMG/M
3300032157\|Ga0315912_11311107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → Neisseria → unclassified Neisseria → Neisseria sp. GT4A_CT1	572	Open in IMG/M
3300033412\|Ga0310810_10105666	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3351	Open in IMG/M
3300034257\|Ga0370495_0045762	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.21%
Host-Associated	Host-Associated	46.90%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	46.90%
Terrestrial	Environmental → Terrestrial	45.13%
Aquatic	Environmental → Aquatic	7.08%
Bioreactor	Engineered → Bioreactor	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.47%
Sediment	Environmental → Aquatic → Sediment	5.31%
Cave	Environmental → Terrestrial → Cave	1.77%
Roots	Host-Associated → Plants → Roots	1.77%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Marine	Environmental → Aquatic → Marine	0.89%
Unclassified	Engineered → Bioreactor → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.31%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.77%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.89%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Down-Flow Hanging Sponge Reactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002089	Soil microbial communities from Manhattan, Kansas, USA - Sample 100um emPCR	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300003278	Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - U2-648F-DHS	Engineered	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025119	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_10722722	3300000881	Soil	MKTVSALFLAIMVAVACSSPKKTTTKADLPTVTRADKLVGGTSFSDPVVIMVQDERTGLDEEYKWLSINYPGYSLVRKTQVTRSSKHYDIVRIKTKQGHLKDIYFDSTRFSGKK*
JGI10214J12806_128578692	3300000891	Soil	KTSTKADSPTVTRADVLVGGTSFSNPIVIMVQDERTGLDEEYKWLSINYPGYSLVRRTQVSKSSRHYDIVRIKTKQGHLKDIYFDSTRFWGKN*
JGI24810J26611_100232	3300002089	Soil	MKTVNTLFVVIILLGSCSSPKKTAPKRNLPTVTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPGYSLMRRTHKLRLSKHYDIVRIKTNQGRLRDIYFDSTHFWGKK*
JGI24808J26613_10417982	3300002099	Soil	MKTVSLLFVFISLIGACSTPKKTTVKDASPTVSSTDLLIGGTSFSDAVVIMVESERAGLDEEYKWLSINYPGYALIFMKWEE*
JGI24809J26612_10057223	3300002100	Soil	MSFEAARSKLTPGIGDAFIAPYFCLNTSDYLAWLKSIFRNTYFMKTVNLLFVVITLICACSTPKKTTEKKDEPTVSSTDLLIGGTSFSSAVVIMVESERAGLDEEYKWLSINYPGYALIRRSHVKRSSRHYDIVRIKTKQGQLKDIYFDSTRFWGKT*
U2draft_10005288	3300003278	Down-Flow Hanging Sponge Reactor	MKAILALFIACLLLTACSSPKKTVTKNDAPKVSREDMLAGGTSFSNPVVIMVQKERAGLDEEYKWLANNYPGYSLIRRRHVSRAAKQYDIVRIKTKQGHLKDIYFDSTRYWGKN*
Ga0055499_100828361	3300004047	Natural And Restored Wetlands	PFFRPVKNFYLPRRNTIFCNIYFMKTVNLLFVVIILFGACSSPKKTTTKNAPPAETPADKLRGGTSFSNAVAIMVENERAGLDEEYKWLASNFPGYALIRRTHVKRSSRHYDIVRIKTTQGQIKDIYFDSTSFWGKS*
Ga0062589_1017987972	3300004156	Soil	IVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0063356_10000166510	3300004463	Arabidopsis Thaliana Rhizosphere	MFAVACSSPKKTSTKSDVPTITRADKLVGGTSFSDPVVIMVQTERAGLDEEYKWLSIDYPGYSLIRRTHEIRSSRHYDIVRIKTKQGQLKDIYFDSTCFSGKN*
Ga0063356_1032122141	3300004463	Arabidopsis Thaliana Rhizosphere	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGK
Ga0062592_1009727912	3300004480	Soil	FIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSISNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0062594_1002876562	3300005093	Soil	MKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0065712_102474422	3300005290	Miscanthus Rhizosphere	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVILAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0065707_110291831	3300005295	Switchgrass Rhizosphere	IVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0070676_115636461	3300005328	Miscanthus Rhizosphere	VAIFVNIYFMKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN*
Ga0070670_1005528502	3300005331	Switchgrass Rhizosphere	MKTVNALFVVIMLLGACSTPKRTAPKRDRPTITHADVLKGGTSFGNPIVIMKQSEREVLDEEYKWLSINYPGYSLVRRTHKVRAAKHYDIVRIKTNQGHLRDIYFDSTRFWGKN*
Ga0068869_1000796942	3300005334	Miscanthus Rhizosphere	MKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN*
Ga0068869_1001738092	3300005334	Miscanthus Rhizosphere	MKTVNALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN*
Ga0070689_1001352573	3300005340	Switchgrass Rhizosphere	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0070689_1020060792	3300005340	Switchgrass Rhizosphere	LGIFVNLYFMKTVYTLLTVIILLGACSSPKKTTPKRNLPIATHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN*
Ga0070668_1003999511	3300005347	Switchgrass Rhizosphere	MKTVYALFVVSMFLGACSTPKKTAPKRNLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRVRDIYFDSTRFWGKN*
Ga0070668_1012135512	3300005347	Switchgrass Rhizosphere	MKTVNTLFVVIILLGSCSSPKKTAPKRNLPTVTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDSTHFWGKN*
Ga0070667_1000954351	3300005367	Switchgrass Rhizosphere	MKTVSVLFVGIMLLGACSTPKKTAPKRDRPAVTHADVLKGGTSFSNPVVIKMQSEREVLDSEYKWLSVNYPGYSLVRRTHTLRSSKHYDIVRIKTNQEQLRDIYFDSTQFWGKN*
Ga0070705_1018837591	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0070662_1007804601	3300005457	Corn Rhizosphere	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDI
Ga0068867_1004032801	3300005459	Miscanthus Rhizosphere	MKTVYALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN*
Ga0070698_1002096292	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKTINLLFVVIILLGACSSPKKTTTKGVSPTVTRTDVLRGGTSFSNAVVIMLENERAGLDEEYKWLANNFPGYALIRRTHVKRSPRHYDIVRIKTKQGQVKDIYFDSTRFWGKI*
Ga0070672_1011690952	3300005543	Miscanthus Rhizosphere	VGIFVNIYFMKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN*
Ga0070672_1016423532	3300005543	Miscanthus Rhizosphere	YFMKTVYALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN*
Ga0068857_1010087302	3300005577	Corn Rhizosphere	MKIVNALFVVIMFLGACSTPKKTAPKRDLPTITHTDILKGGTSYSNPIVILMQSEREVLDEEYRWLSINYPGYSLMRRSHKIRSSRHYDIVRIKTNQGRLRVIYFDSTHFWGKH*
Ga0068859_1002167904	3300005617	Switchgrass Rhizosphere	FTVNSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0068866_108012952	3300005718	Miscanthus Rhizosphere	MKTAGALFIVIIVAVACSSPKKTATKADLPTVTRADKLVGGTSFSDPVVIMVQNESAGLDEEYKWLSINYPGYSLVRRTHEIRTSRHYDIVRIKTKQGHLKDIYFDSTRFWGKN*
Ga0068861_1000762693	3300005719	Switchgrass Rhizosphere	MKTVNVLFVVSMFLGACSTPKKTAPKRNLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN*
Ga0068860_1018602871	3300005843	Switchgrass Rhizosphere	MKTVNALFVVSMFLGACSTPKKTAPKRNLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN*
Ga0097621_1015464422	3300006237	Miscanthus Rhizosphere	LSINNVNIYFMKTVYALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQ
Ga0068871_1020042522	3300006358	Miscanthus Rhizosphere	LFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN*
Ga0066653_103164331	3300006791	Soil	MTHGFEFSNSYSSVRILLFILPAKSSFFPYTYFMKTVNLLFVVVIIFVGACSSPKKTTAKGASPTATHDDILRGGTSFSNAVVIMVENESAGLNEEYKWLANNYPGYALVRRTEVKRSSK
Ga0075428_1011526112	3300006844	Populus Rhizosphere	MKTASALFLAIMVAVACSSPKKTTTKADLPTVTRADKLVGGTSFSDPVVIMVQDERTGLDEEYKWLSINYPGYSLVRKTQVTRSSKHYDIVRIKTKQGHLKDIYFDSTRFSGKK*
Ga0075428_1022270962	3300006844	Populus Rhizosphere	MKTANLLFLLIILLEACSSPKKTPVKADSPVVTRTDVLRGGTSFSNAVVIKVESERAGLDEEYKWLSNNYPGYSLIRRTHVSRLSRHYDIIRIKT
Ga0079217_104273951	3300006876	Agricultural Soil	MKTINLLFVVIILLGACSSPKKTTTKGVSPTVTRTDVLRGGTSFSNAVVILLENERAGLDEEYKWLANNFPGYALIRRTHVMRSSRHYDIVRIKTKQGQVKDIYFDSTRFWGKI*
Ga0079215_109111013	3300006894	Agricultural Soil	FMKTINLLFVVIILLGACSSPKKTTTKGPSPVVTRTDVLRGGTSFSNAVVILLENERAGLDEEYKWLANNFPGYALIRRTHVIRSSRHYDIVRIKTKQGQVKDIYFDSTRFWGKI*
Ga0079216_103587191	3300006918	Agricultural Soil	MKTINLLFVVIILFGACSSPKKTTTKGPSPTVTRTDVLRGGTSFSNAVVILLENERAGLDEEYKWLANNFPGYALIRRTHVMRSSRHYDIVRIKTKQGQVKDIYFDSTRFWGKI*
Ga0075418_111260742	3300009100	Populus Rhizosphere	MKPACVLIIVIIVDVACSPPKKTSTKSDLSTVTRSDKLIGGTSFSDPIVIMVENERTGLDEEYKWLSINYPGYSLIRRTQVTRSSKHYDIVRIKTKQGILRI
Ga0105247_110418381	3300009101	Switchgrass Rhizosphere	MKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDSTHFWGKN*
Ga0105242_101943171	3300009176	Miscanthus Rhizosphere	MKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSVVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN*
Ga0105249_101893454	3300009553	Switchgrass Rhizosphere	MKTVSVLFVGIMLLGACSTPKKTAPKRDRPAVTHADVLKGGTSFSNPVVIKMQSEREVLDSEYKWLSVNYPGYSLVRRTHTLRSSKHYDIVRIKTNQGQLRDIYFDSTQFWGKN*
Ga0105249_110248791	3300009553	Switchgrass Rhizosphere	MKTVNTLFVVIILLGSCSSPKKTAPKRNLPTVTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPGYSLMRRTHKLRLSKHYDIVRIKTNQGRPRDIYFDSTHFWGKK*
Ga0105249_110593552	3300009553	Switchgrass Rhizosphere	MKTVYTLLTVIILLGACSSPKKTTPKRNLPIATHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDSTHFWGKN*
Ga0105252_103235782	3300009678	Soil	MKTVNLLFVFISLIGACSTPKKTTVKGASPTVSPTDVLIGGTSFSNAVVIMVESERAGLDEEYKWLSINYPGYALIRRSHVKRSSRHYDIIRIKTKQGQVKDIYFDSTRFWGKI*
Ga0134122_110748262	3300010400	Terrestrial Soil	MKTVIALFVVIMLAGACSTPKKTAPKRNGPTVTHADLLKGGTSFSNPVVIMMQSEREVLDAEYKWLSINYPGYSLVRRSHKRSSSKHFDIVRIRTNQGQLRDVYFDSTHFWGKK*
Ga0134122_125829641	3300010400	Terrestrial Soil	MKTVNALFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN*
Ga0137433_11152702	3300011440	Soil	FFRNTYFMKTVNLLFVFISLIGACSTPKKTTVKGASPTVSPTDVLIGGTSFSNAVVIMVESERAGLDEEYKWLSINYPGYALIRRSHVKRSSRHYDIIRIKTKQGQVKDIYFDSTRFWGKI*
Ga0137320_10108012	3300012172	Soil	MKTVNLLFVFISLIGACSTPKKTTVKGASPTVSPTDVLIGGTSFSNAVVIMVESERAGLDEEYKWLSINYPGYALIRRSHVKRSSRHYDIIR
Ga0137447_11285682	3300012226	Soil	LGACASHKKTTTKDASPAVTHTDLLKGGTSFSNAVVIMVDSEREGLKEEYKWLSNNYPGYGLIRRTHVKRSSRHYDIIRIKTQDGQVKDIYFDSTRFWGKF*
Ga0157284_100419491	3300012893	Soil	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSISNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN*
Ga0157295_102014011	3300012906	Soil	MDDLSLNFTVNSLFFLNANFMKSVFVLFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTR
Ga0157380_105122423	3300014326	Switchgrass Rhizosphere	MKRLFVLLIPIMLLAACSSPKKTSTKAEPPKVTRADVLNGGTSFNNPVVIMVQTERAGLDEEYKWLSNNYQGYALIRRKQVSKSSKHYDVIRIKTKQGQLKDIYFDSTHFWGKN*
Ga0173480_105278981	3300015200	Soil	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVILAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKD
Ga0132258_121196142	3300015371	Arabidopsis Rhizosphere	MKTAGALFIVIIVAVACSSPKKTATKADLPTVTRADKLVGGTSFSDPVVIMVQTESAGLDEEYKWLSINYPGYSLVRRTHEIRTSRHYDIVRIKTKQGHLKDIYFDSTRFWGKN*
Ga0163161_111186722	3300017792	Switchgrass Rhizosphere	IVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN
Ga0184611_11399781	3300018067	Groundwater Sediment	EYFCLPCLTKVHFFPYTYIMKTVNFLFVVIIIFLGACSSPKKTTTKGDTPTATHDDILRGGTSFSNAVVIMVESESAGLNEEYKWLANNYPGYALVRRTHVKRSSRNYDIVRIKTKQGQVKDIYFDSTRFWGKT
Ga0184629_103463182	3300018084	Groundwater Sediment	MKTVNLLFVVIILLGACASPKKTTTKDASPAVTHTDLLKGGTSFSNAVVIMVESEREGLNEEYKWLSNNYPGYGLIRRTHVKRSSGQYDIIRIKTQHGQVKDIYFDSTRFLGKF
Ga0190272_100646272	3300018429	Soil	MKTVNLLFVVMIIFLGACSSPKKTTAKAALPKATRAEILRGGTSFSNAIVIMVESERAGLNEEYKWLANNYPGYGLVRRTHVERSARHYDIIRIKTKQGQVKDIYFDSTRFWGKS
Ga0190272_100796621	3300018429	Soil	MKAVNLLFVVIIIFLGGCSSPKKTTNNVALPKATKAEMLRGGTSFSNAVVIMVESESAGLNEEYKWLANNYPGYGLVRRTHVKRSSRHYDIVRIKTQQGQVKDIYFDSTRFWGKN
Ga0190272_101820843	3300018429	Soil	MKTVNLLFVVIIFIGGCSSPKKTTTKGALPTATHADILRGGTSFSNAVVIMVESERAGLNEEYKWLANNYPGYALVRKTHVKRSSRHYDIIRIKTQQGQVK
Ga0190272_127887731	3300018429	Soil	LLKYFCLSCLTKVHFFPYTYFMKTANLLFVVIIIFLGACSSPKKTTTKGALPTATHTDILRGGTSFSNAVVIMVESERAGLNEEYKWLANNYPGYALVRRTHVKRSSRHYDIIRIKTQQGQVKDIYFDSTRFWGKI
Ga0190272_131109922	3300018429	Soil	GACSSPKKTTTKAALPKATRAEILRGGTSYSNAVVIMVESEGAGLNEEYKWLANNYPGYGLVRRTHVKRSSRHYDIVRIKTQQGQVKDIYFDSTRFWGKI
Ga0190270_117657462	3300018469	Soil	SPEKTTTKGALPRATHEDLLRGGTSFSNAVVIMVQSEKVGLNEEYKWLANNYPGHALVRRTHVKRLSRHYDIVRIKTKQGQVKDIYFDSTRFRGKT
Ga0190274_111674881	3300018476	Soil	LPGNSSFPAYTYFMKTVNLLLVVVISFLGACSSPKKTTTKPASPAPTHDDILRGGTSFSNAVVIMVESESAGLKEEYKWLANNYPGYALVRRTHVKKSSRNYDIIRIKTQQGQI
Ga0190274_129313491	3300018476	Soil	MKTVNFLFVVIIILLGACSSPKKTTTKGDTPTATHDDILRGGTSFSNAVVIMVESESAGLNEEYKWLANNYPGYALVRRTHVKRSSRNYDIIRIKTK
Ga0187892_100083961	3300019458	Bio-Ooze	VTIRLSQPGKKLLFIFPNETLYLKTIHLLFVVFILVGACSSPKKTTTKSVPPAETPADKLRGGGSFSNAVVIMVENERAGLDEEYKWLANYFPGYALIRRTHVKRSSRHYDVVRIKTKQGQVKDVYFDSTRFWGKN
Ga0187893_1001916612	3300019487	Microbial Mat On Rocks	MKTIHLLFVVFILVGACSSPKKTTTKSVPPAETPADKLRGGGSFSNAVVIMVENERAGLDEEYKWLANYFPGYALIRRTHVKRSSRHYDVVRIKTKQGQVKDVYFDSTRFWGKN
Ga0193744_10073172	3300019874	Soil	MIMKPVNALFVVIMFLGACSTPKKTAPKRNSPAVTQADIMRGGTSFSNPIVITMQSEREVLDEEYKWLSINYPGYSLVRKTHKVRSSKFYDIVRIKTREGRLRDIYFDSTNFWGKSKR
Ga0193692_11272621	3300020000	Soil	FLNLSIHIIVVLLEYFCLSCLAKFIFSLYTYFMKTVNLLFVVVIIFLGACSSPKKTTTKGPSPTATHDDILRGGTSFSNAVVIMVESESAGLNEEYKWLANNYPGYALVRRTEVKRSSKHYDIIRIKTQQGQVKDIYFDSTRFWGKT
Ga0247792_10732452	3300022880	Soil	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN
Ga0247753_10282761	3300022892	Soil	MDDLSLNFTVNSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFW
Ga0209126_10628281	3300025119	Soil	MKTINLLFAVIILFGACSSPKKTTTKSASPAVTRTDVLRGGTSFSNAVVIMLENERAGLDEEYKWLANNFPGYALIRRTHVKRSSRHYDIVRIKTKQGQVKDIYFDSTRFWGKI
Ga0207642_106542032	3300025899	Miscanthus Rhizosphere	MKTAGALFIVIIVAVACSSPKKTATKADLPTVTRADKLVGGTSFSDPVVIMVQNESAGLDEEYKWLSINYPGYSLVRRTHEIRTSRHYDIVRIKTKQGHLKDIYFDSTRFWGKN
Ga0207645_104382672	3300025907	Miscanthus Rhizosphere	MKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRVRDIYFDSTRFWGKN
Ga0207681_100224744	3300025923	Switchgrass Rhizosphere	MKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN
Ga0207650_102294232	3300025925	Switchgrass Rhizosphere	MKTVNALFVVIMLLGACSTPKRTAPKRDRPTITHADVLKGGTSFGNPIVIMKQSEREVLDEEYKWLSINYPGYSLVRRTHKVRATKHYDIVRIKTNQGHLRDIYFDSTRFWGKN
Ga0207706_111637701	3300025933	Corn Rhizosphere	MKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTHFWGKN
Ga0207686_104019362	3300025934	Miscanthus Rhizosphere	VGIFVNIYFMKTVNALFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN
Ga0207669_106102131	3300025937	Miscanthus Rhizosphere	VYALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSHPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Ga0207691_102700642	3300025940	Miscanthus Rhizosphere	MKTVYALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Ga0207689_100048254	3300025942	Miscanthus Rhizosphere	MKTVNALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Ga0207689_100285273	3300025942	Miscanthus Rhizosphere	MKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDCTHFWGKN
Ga0207712_104605022	3300025961	Switchgrass Rhizosphere	LSISNNVNIYFMKTVSVLFVGIMLLGACSTPKKTAPKRDRPAVTHADVLKGGTSFSNPVVIKMQSEREVLDSEYKWLSVNYPGYSLVRRTHTLRSSKHYDIVRIKTNQGQLRDIYFDSTQFWGKN
Ga0207712_106107291	3300025961	Switchgrass Rhizosphere	INNVNIYFMKTVNVLFVVSMFLGACSTPKKTAPKRNLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Ga0207712_109802671	3300025961	Switchgrass Rhizosphere	MKTVNTLFVVIILLGSCSSPKKTAPKRNLPTVTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPGYSLMRRTHKLRLSKHYDIVRIKTNQGRPRDIYFDSTHFWGKK
Ga0207668_110134061	3300025972	Switchgrass Rhizosphere	MKTVYALFVVSMFLGACSTPKKTAPKRNLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRVRDIYFDSTRFWGKN
Ga0207640_110815482	3300025981	Corn Rhizosphere	YFMKTVYALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKLRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Ga0207703_104280743	3300026035	Switchgrass Rhizosphere	VGIFVNIYFMKTVNTLFVVIILLGACSSPKKTAPKRDLPITTHADELKGGTSFSNPIVIMMQSEREVLDEEYKWLSINYPRYSLVRRTHKLRSSKHYDIVRIKTSQGRLRDIYFDCTHFWGKK
Ga0207708_100886073	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFHSTRFWGKN
Ga0207648_104294002	3300026089	Miscanthus Rhizosphere	LSINNVNIYFMKTVYALFVVSMFLGACSTPKKTAPKRDLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Ga0207674_109956222	3300026116	Corn Rhizosphere	MKIVNALFVVIMFLGACSTPKKTAPKRDLPTITHTDILKGGTSYSNPIVILMQSEREVLDEEYRWLSINYPGYSLMRRSHKIRSSRHYDIVRIKTNQGRLRVIYFDSTHFWGKH
Ga0207675_1002010243	3300026118	Switchgrass Rhizosphere	MKTVNVLFVVSMFLGACSTPKKTAPKRNLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRVRDIYFDSTRFWGKN
Ga0209023_105943611	3300027870	Freshwater And Sediment	MKTAIFLLTAILLLAACSSPKKTPAKSDSPKVTRADILLGGTSFNNPVIIMVQAESAGMDEEYKWLSNSYPGYALIRRTHTSRSNRQYDIVRIKTKQGQLKDIYFDSTRFWGKN
Ga0268264_121724341	3300028381	Switchgrass Rhizosphere	MKTVNALFVVSMFLGACSTPKKTAPKRNLPAVTHADVLKGGTSFSNPVVIMMQSEREVLDDEYKWLSVNYPGYSLVRRTHKVRSSKHYDIVRIKTNQGRLRDIYFDSTRFWGKN
Ga0310813_106814051	3300031716	Soil	NFTVNSLFFLNAFFMKSVFVFFIVVILAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN
Ga0307468_1009267961	3300031740	Hardwood Forest Soil	TVNLLFVFITLICACSTPKKTTVKEPSPTVSPADVLNGGTSFNNAVVIMVESERAGLDEEYKWLSINYPGYALIRRSHVKRSSRHYDVIRIKTKQGQVKDIYFDSTRFWGKT
Ga0310904_104210262	3300031854	Soil	MKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGH
Ga0310893_102090732	3300031892	Soil	NSLFFLNANFMKSVFVFFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN
Ga0310900_104603422	3300031908	Soil	FIVVTVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN
Ga0310900_117388672	3300031908	Soil	YCMKRLFVLLIPIMLLAACSSPKKTSTKAEPPKVTRADVLNGGTSFNNPVVIMVQTERAGLDEEYKWLSNNYQGYALIRRKQVSKSSKHYDVIRIKTKQGQLKDIYFDSTHFWGKN
Ga0307414_101781381	3300032004	Rhizosphere	MKTVNFLFVVIIIFLGACSSPKKTTTKVASPKPTRTDILRGGTSFSNAVIIMVENERAGLNEEYKWLANNYPGYALVRRTHVERSEKHYDIIRIKTQQGQVKDIYFDSTRFWGKI
Ga0315910_100825174	3300032144	Soil	MKTAIVLLITIMLFTDCSTPKKTSTKEDTPKVSGTDVLKGGTSFNNPVVIMVESERAGLDEEYKWLSNNYQGYALIRRRHVSRSSRHYDVVRIKTKQGQVKDIYFDSTRFWGKN
Ga0315910_101937503	3300032144	Soil	MKTTSALVIAIMLLTACSSPKKTPTRDDVPKASRTDVLRGGTSFSNAIVIMVENESAGLNEEYKWLANNYPGYSLVRRNSVKKSSKHYDIIRIKTQGQVKDIYFDSTHFWGKN
Ga0315912_101363332	3300032157	Soil	MKTSVVLFITIVFAVACSAPKKTPAKTEAPKVSRSDMLKGGTSFSAPVVIMVQDEKTGLEEEYKWLSINYPGYSLIRRTEVSRPPKHFDVVRIKTKQGQLKDIHFDSTRFSGKN
Ga0315912_103894421	3300032157	Soil	MKTAIVLLITIMLFTDCSTPKKTSTKEDTPKVSGTDVLKGGTSFNNPVVIMVESERAGLDEEYKWLSKNYQGYALIRRRHVSRSSRHYDVVRIK
Ga0315912_113111071	3300032157	Soil	MKTVNFLFVIIIIFLGACSSPKKISNKGALPTATHDDILRGGTTFSNAVVIMVENESSGLKEEYKWLANNYPGYALVRRTHVKKSSRHYDIIRIKTQGQVKDIYFDSTRFWGKI
Ga0310810_101056664	3300033412	Soil	MDDLSLNFTVNSLFFLNANFMKSVFVLFIVVIVAVACSSPKKTPPKADSPTVTHSDVLNGGTSFSNPVVIMVQDERTGLDEEYKWLSINYPGYSLVRRTHVTRSSKQYDIVRIKTRQGHLKDIYFDSTRFWGKN
Ga0370495_0045762_1_351	3300034257	Untreated Peat Soil	MPKKSSFFSYTYFMKTVNLLFVVVIIFLGACSSPKKTTTKVASPKPTHAELLRGGTSFSNAVVIMVQNESAGLNEEYKWLANNYPGYGLVRRTHVKRSSRQYDIIRIKTQHGQLKDI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082835

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences