Metagenome / Metatranscriptome Family F082827

Basic Information
Family ID	F082827
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	85 residues
Representative Sequence	MKATRYLLAAMVLGTAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIADAGPSFT
Number of Associated Samples	105
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.86 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	88.50 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (79.646 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.354 % of family members)
Environment Ontology (ENVO)	Unclassified (31.858 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150 1Perma_A_C_01836080 2P3_CLC_01620460 3A_all_C_02569230 4AL20A1W_12661542 5JGI12654J13325_10131631 6A21PFW6_13225802 7JGI12635J15846_106536991 8JGI12053J15887_102434592 9Ga0063454_1003785582 10Ga0063455_1001837161 11Ga0062594_1001854571 12Ga0062594_1016053721 13Ga0066690_106776361 14Ga0066676_107558291 15Ga0066676_110292191 16Ga0065705_104033583 17Ga0070676_103838931 18Ga0070676_109064201 19Ga0070690_1001265573 20Ga0070682_1007025461 21Ga0070687_1006812632 22Ga0070671_1003538942 23Ga0070667_1010912541 24Ga0066686_101328622 25Ga0070662_1011429081 26Ga0070681_112964411 27Ga0070697_1003172071 28Ga0070697_1010843951 29Ga0070686_1000476651 30Ga0070695_1004294141 31Ga0070695_1015552981 32Ga0070696_1002058731 33Ga0066705_103688582 34Ga0068856_1018928781 35Ga0068861_1003469141 36Ga0097621_1020947542 37Ga0079222_101176073 38Ga0066660_113280231 39Ga0099794_104587811 40Ga0105242_120575342 41Ga0099796_101866921 42Ga0134084_101613181 43Ga0134125_124170711 44Ga0134122_125526341 45Ga0134123_126923251 46Ga0120134_10037691 47Ga0137382_107199631 48Ga0137363_117317771 49Ga0137399_111354741 50Ga0137362_107250912 51Ga0137379_102324513 52Ga0137377_107098542 53Ga0157354_10880151 54Ga0157308_103127541 55Ga0137394_112385801 56Ga0137407_123325061 57Ga0164298_114786991 58Ga0164303_114399511 59Ga0164302_104625591 60Ga0157373_108956922 61Ga0120158_101129021 62Ga0120135_10121303 63Ga0134079_100194962 64Ga0182000_103735671 65Ga0137420_13963452 66Ga0134072_102162262 67Ga0134072_103068651 68Ga0134074_13699481 69Ga0180121_102011231 70Ga0184604_102308491 71Ga0190272_102059882 72Ga0190275_110896132 73Ga0066662_121197111 74Ga0066669_100292563 75Ga0193705_10091491 76Ga0193712_10818481 77Ga0193729_10534064 78Ga0193751_10343562 79Ga0193731_10145914 80Ga0193755_10291761 81Ga0193755_11834901 82Ga0193721_10050462 83Ga0210381_102597071 84Ga0210382_102569281 85Ga0193709_10905162 86Ga0222622_103259481 87Ga0207929_10007448 88Ga0207699_112791751 89Ga0207645_103396611 90Ga0207654_108365551 91Ga0207652_105437882 92Ga0207687_112770871 93Ga0207651_119544041 94Ga0207675_1018956011 95Ga0209470_13345801 96Ga0209805_11257621 97Ga0209220_11788021 98Ga0209117_10396222 99Ga0209011_10447681 100Ga0209073_101321402 101Ga0209180_102992112 102Ga0209590_105947831 103Ga0209526_101280034 104Ga0209526_102761271 105Ga0307276_101110101 106Ga0307313_102421441 107Ga0307305_100221682 108Ga0307294_102629601 109Ga0307302_104059121 110Ga0307312_100104095 111Ga0307278_100333671 112Ga0308197_104471411 113Ga0307471_1023479112
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150 1Perma_A_C_01836080 2A_all_C_02569230 3JGI12654J13325_10131631 4A21PFW6_13225802 5JGI12635J15846_106536991 6JGI12053J15887_102434592 7Ga0063454_1003785582 8Ga0062594_1001854571 9Ga0062594_1016053721 10Ga0066690_106776361 11Ga0066676_107558291 12Ga0065705_104033583 13Ga0066686_101328622 14Ga0070686_1000476651 15Ga0070696_1002058731 16Ga0105242_120575342 17Ga0099796_101866921 18Ga0120134_10037691 19Ga0137399_111354741 20Ga0164302_104625591 21Ga0180121_102011231 22Ga0190272_102059882 23Ga0190275_110896132 24Ga0193755_11834901 25Ga0209220_11788021
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1Ga0070682_1007025461 2Perma_A_C_01836080 3A_all_C_02569230 4A21PFW6_13225802 5JGI12635J15846_106536991 6JGI12053J15887_102434592 7Ga0063454_1003785582 8Ga0063455_1001837161 9Ga0062594_1016053721 10Ga0066690_106776361 11Ga0066676_107558291 12Ga0070662_1011429081 13Ga0070697_1003172071 14Ga0070696_1002058731 15Ga0099796_101866921 16Ga0134122_125526341 17Ga0120134_10037691 18Ga0137382_107199631 19Ga0137363_117317771 20Ga0137399_111354741 21Ga0137377_107098542 22Ga0137394_112385801 23Ga0164298_114786991 24Ga0164303_114399511 25Ga0164302_104625591 26Ga0120135_10121303 27Ga0182000_103735671 28Ga0180121_102011231 29Ga0184604_102308491 30Ga0190272_102059882 31Ga0190275_110896132 32Ga0193712_10818481 33Ga0193731_10145914 34Ga0193755_11834901 35Ga0210381_102597071 36Ga0209805_11257621 37Ga0209220_11788021 38Ga0209011_10447681 39Ga0209526_101280034 40Ga0209526_102761271 41Ga0307276_101110101 42Ga0307312_100104095 43Ga0308197_104471411
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.52% β-sheet: 5.56% Coil/Unstructured: 75.93%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13193	AMP-binding_C	19.47
PF00535	Glycos_transf_2	2.65
PF04191	PEMT	2.65
PF03379	CcmB	1.77
PF13715	CarbopepD_reg_2	1.77
PF12697	Abhydrolase_6	1.77
PF00593	TonB_dep_Rec	1.77
PF16177	ACAS_N	0.88
PF07715	Plug	0.88
PF00005	ABC_tran	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	1.77

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	69.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	69.03 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.88 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.88 %
Unclassified	root	N/A	20.35 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	63.72 %

Name	Rank	Taxonomy	Distribution
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.88 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.88 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.88 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.88 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.88 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.88 %
Unclassified	root	N/A	20.35 %
unclassified Brevundimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas	0.88 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.88 %

Name	Rank	Taxonomy	Distribution
Brevundimonas sp. BAL3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. BAL3	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.88 %
Pseudomonas sp. GM60	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM60	0.88 %
Segetibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter	0.88 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Brevundimonas sp. BAL3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. BAL3	0.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.88 %
Pseudomonas sp. GM60	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM60	0.88 %
Segetibacter koreensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter → Segetibacter koreensis	0.88 %
Unclassified	root	N/A	20.35 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig140472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1102	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig12605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
2140918007\|ConsensusfromContig151752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	739	Open in IMG/M
3300000880\|AL20A1W_1266154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
3300001160\|JGI12654J13325_1013163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300001593\|JGI12635J15846_10653699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M
3300001661\|JGI12053J15887_10243459	Not Available	897	Open in IMG/M
3300004081\|Ga0063454_100378558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300004153\|Ga0063455_100183716	Not Available	1011	Open in IMG/M
3300005093\|Ga0062594_100185457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1426	Open in IMG/M

Showing 1 to 10 of 112 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.73%
Host-Associated	Host-Associated	13.27%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.42%
Plants	Host-Associated → Plants	13.27%
Terrestrial	Environmental → Terrestrial	82.30%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.73%
Roots	Host-Associated → Plants → Roots	0.89%
Sediment	Environmental → Aquatic → Sediment	1.77%
Soil	Environmental → Terrestrial → Soil	82.30%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Loam	Environmental → Terrestrial → Soil → Loam	19.47%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.42%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.50%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M

Showing 1 to 10 of 105 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_01836080	2124908032	Soil	MSATRYLLAAMVLGSAISVTQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTSTLSSPTADQVEIGATLADAGPSFTIKANRSWTLNIPISRQPSEYFARDQNPSTFSL
P3_CLC_01620460	2124908041	Soil	MVLGTALGASQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTSTLSSPTADQVEIGATLADAGPSFTIKANRSWTLNIPISRQPSEYFARDQNPSTFSL
A_all_C_02569230	2140918007	Soil	MRATRSLLAAMVLGTAIGASQANAQCSSNTGSCNTTNTASVTVGALVKLDMSANTTALTNPSVSDVETGNILANAGPTFTIKANRSWNLK
AL20A1W_12661542	3300000880	Permafrost	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTSTLSSPTADQVEIGATLADAGPTFTIKANRSWTLNIRTSN
JGI12654J13325_10131631	3300001160	Forest Soil	MKATRLLLAAMVFGTVIGASQANAQGCSGANSCAGTNTAQVIVPALVKLAMTSNTTSLTAPTADQVDLGATVGPDAGPTFTIKANRSWTLNIRSGNPTNWTYTGANSGV
A21PFW6_13225802	3300001333	Permafrost	MKATRSLLAAMVLGTAICAGQANAQGCSGNAGTCNTTHTASVTVGSLVKLIMSSATTTLTAPLADDINTGAVIPDNGPTFTIKSNRAWDLKIKAQPAVAGLWDYSGTDAGQXXXXLQRSPRVT*
JGI12635J15846_106536991	3300001593	Forest Soil	MNATRFLLPAVVVASVFGANQAEAQCSGSGSCNTTNTASVIVNALVKLGMGSTTTSLTSPTADQVEIGAVVPDNGPTFTIKANRSWTLNIKTTNA
JGI12053J15887_102434592	3300001661	Forest Soil	MKATRILLAAMVFGTVIGANKANAQNCGGIGSCNLTNTASVAVGALVKLTMSSATTTLTPPSASDL
Ga0063454_1003785582	3300004081	Soil	MKATRSLLAAMVVATAIRATQVNAQCSGNAGSCNTTNTASVTVGALVKLGMSSNTTALTNPTADQVDAGTALDNVGPVFSVKANRSWTL
Ga0063455_1001837161	3300004153	Soil	MKATRSILAAMVLATAIGATQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSNTTALTNPTADDVDAGNVIADAGPTFSV
Ga0062594_1001854571	3300005093	Soil	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSFTI
Ga0062594_1016053721	3300005093	Soil	MNATRFILAAMVIGSAICVNQASAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTSLSSPTADQVETGVTLADNGPSFTIKANRSWTLNIK
Ga0066690_106776361	3300005177	Soil	MNATRIMLAAMVLGAAISVEKAGAQNCSGNAGSCNTTNTASVSVNALVKLGMNSAATTLTAPTADQVEIGANIADVGPNFTIKANRSWTLNIKTTN
Ga0066676_107558291	3300005186	Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGMGATATTLSSPTADQIDIGATLADAGPTFTIKANRSWTLNIRTSNASNWTYVGSNGGTK
Ga0066676_110292191	3300005186	Soil	VAGTIKFLGEKITMKATRSLLAAMVLATAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSFT
Ga0065705_104033583	3300005294	Switchgrass Rhizosphere	MKATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSGTTTALTAPTADDIDAGAI
Ga0070676_103838931	3300005328	Miscanthus Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKAN
Ga0070676_109064201	3300005328	Miscanthus Rhizosphere	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSFTIKANRSWTLKIKSQN
Ga0070690_1001265573	3300005330	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIPNAGPTFTIKANRSW
Ga0070682_1007025461	3300005337	Corn Rhizosphere	MKATRYLLAAMVLGTAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIADAGPSFT
Ga0070687_1006812632	3300005343	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTTLTNPTADDVDAGNTIADAGPSFTVKSNR
Ga0070671_1003538942	3300005355	Switchgrass Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKANRSWTL
Ga0070667_1010912541	3300005367	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIPNAGPTFTIKANRS
Ga0066686_101328622	3300005446	Soil	MNATRSFLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLGMSATATTLSSPTADQVDIGATLAD
Ga0070662_1011429081	3300005457	Corn Rhizosphere	MTATRSILAAMVLGAAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTTLTSPTADQIEVGANIADNGPTFTVKANRSWSL
Ga0070681_112964411	3300005458	Corn Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKANRSWTLKIKSQ
Ga0070697_1003172071	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRNLLAAMVLGTIITASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTSLTSPTADDIDVGAVLANAGPSFTIKAN
Ga0070697_1010843951	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRYLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAGPSFTIKANRSWTLKIKSQNA
Ga0070686_1000476651	3300005544	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIANAGPTFTIKANRSWTLKIKSQNATNWTYVGSDAGVKPIG
Ga0070695_1004294141	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSF
Ga0070695_1015552981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNANRFLLAALVLGSLAGANQANAQCSGNAGGCLTINTASATVNALVKLGMSATTTTISSPTADQVDIGATIA
Ga0070696_1002058731	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNATRYVLAAMVFGAAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTSLTSPTADQVEVGANIADAGPSF
Ga0066705_103688582	3300005569	Soil	MKATRSLLAAMVLATAIGARTANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAG
Ga0068856_1018928781	3300005614	Corn Rhizosphere	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTTTLTSPTADQVEVGA
Ga0068861_1003469141	3300005719	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIPNAGPTFTIKANRSWTLKIKSQ
Ga0097621_1020947542	3300006237	Miscanthus Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTDPTANDVDA
Ga0079222_101176073	3300006755	Agricultural Soil	MNATRYVLAAMVLGTAIGANQANAQCSGNAGSCNSTNTVSATVNALVKLGMSAATTTLTSPTADQVEVGANIADAGPTFTIKA
Ga0066660_113280231	3300006800	Soil	MNATRIMLAAMVLGAAISVNKAGAQNCSGNAGSCNTTNTASVSVNALVKLGMNSAATTLTAPTADQVEIGANIADVGPNFTIKANRSWTLNIKTTNPSTW
Ga0099794_104587811	3300007265	Vadose Zone Soil	MKATRFLLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTTTLSSPTADQVEVGALLADVGPTFTVKANRSWTLNVRTSNPAN
Ga0105242_120575342	3300009176	Miscanthus Rhizosphere	MNATRFILAAMVIGSAICVNQAEAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTTLSSPTADQVET
Ga0099796_101866921	3300010159	Vadose Zone Soil	MNATRLLMAALVLGTAIAGNKASAQCSGNAGSCNTTNTASATVNALVKLGMSGTATTLTSPTADQIEIGASIPDNGPTFTIKANRSWSLNVKTTAV
Ga0134084_101613181	3300010322	Grasslands Soil	MKATRFLLAAMVLATAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAGPSFTIKAN
Ga0134125_124170711	3300010371	Terrestrial Soil	MNATRFLLAAMVLGSAISVNQAGAQCSGNAGSCNTTNTASVSVNNLVKLGMGSATTSLTSPTADQVEVGATI
Ga0134122_125526341	3300010400	Terrestrial Soil	MNATRFVLAAMVLGTAISANQAGAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVDVGATLAD
Ga0134123_126923251	3300010403	Terrestrial Soil	MNATRFVLAAMVLGTAISANQAGAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVDVG
Ga0120134_10037691	3300012004	Permafrost	MKATRLLLAAMVLGTAIGASQANAQCSSVGATGTCSTTNTAQVVIPSLVKLGMGATTTSLTAPSADDVDAGTPIDDAGPALSIK
Ga0137382_107199631	3300012200	Vadose Zone Soil	MRATRSLLAAMVLGTATGASQANAQCSGNAGTCNTTNVASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIANDGPSFTIKANRSWTL
Ga0137363_117317771	3300012202	Vadose Zone Soil	MNATRLILAAMVLGSAIGVNQANAQCSGNAGGCLTVNTASATVNALVKLGMSAATTTLSSPTADQFEIGATLADAGP
Ga0137399_111354741	3300012203	Vadose Zone Soil	MVLATAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSATTSLTNPTADQVDAGTAIDN
Ga0137362_107250912	3300012205	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNVASVTVGALVKLGMSSATTSLTNPTADDVDAGNVISDAGPSFTIKANRSWTLKIK
Ga0137379_102324513	3300012209	Vadose Zone Soil	MNATRFLLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKFGMSATTSTLSSPTADQVDIGATLADAGP
Ga0137377_107098542	3300012211	Vadose Zone Soil	MKATRLLAAMVLGTAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMTSATTALTNPSADQVDAGLALDNAGPSFTIKANRSWTLKIKASPAVAGF
Ga0157354_10880151	3300012517	Unplanted Soil	LEQKKMNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTVTASVNALVKLGMSSAATTLASPTADQVEIGATLADAGPSFTIKANRSWSLNIK
Ga0157308_103127541	3300012910	Soil	MKATRNLLAAMVLGIAICASQASAQCSGNAGSCNTTSTASVTVGALVKLGMSSATTSLTNPTADDVDAGN
Ga0137394_112385801	3300012922	Vadose Zone Soil	MKATRFLLAAMVLGSAISVSQASAQCSGNAGGCLTVNTASATVNALVKLGMSATTTTLSSPTADQVEVGALLADVGPTFTVKA
Ga0137407_123325061	3300012930	Vadose Zone Soil	LEQKEMNATRLILAAMVLGSAIGVNQADAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTTLTSPTADQVEVGANIADGGP
Ga0164298_114786991	3300012955	Soil	MKATRSLLAAMVLATALGAIQANAQCSGNAGSCNTTNTASVTGGTLVKLGMSSSATALTNPTADDVDAGNVLADAGPIFSI
Ga0164303_114399511	3300012957	Soil	LEQKTMNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTVTASVNALVKLGMSSAATTLASPTADQVEIGATLADAGPSFTI
Ga0164302_104625591	3300012961	Soil	MNATRIVLAAMVLGTAIGANQANAQCSGNAGSCNSTNTVSATVNALVKLGMSAATTTLSSPTADQVEIGANLADAGPTFTIKANR
Ga0157373_108956922	3300013100	Corn Rhizosphere	MNATRFILAAMVIGSAICVNQAEAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTTLSSPTADQVETGV
Ga0120158_101129021	3300013772	Permafrost	MVLGTAIGASQANAQCSGSAGTCNTTNTASVTVGALVKLGMSSAATALTNPTADDVDAGNVIAD
Ga0120135_10121303	3300014054	Permafrost	MNANRFLIAALVLGSLAGANQANAQCSGNAGGCLTINTASATVNALVKLGMSGTTTALSSPTADQVDIGATLADGGPTFTIKANR
Ga0134079_100194962	3300014166	Grasslands Soil	MKATRSLLAAMVLATAIGARTANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAGPSFTIKANRSWTLKIKSQ
Ga0182000_103735671	3300014487	Soil	MNATRFLLAAMVLGTAIGVNQANAQCSGNAGSCNSTNTVSATVNPLVKLGMSAVTTTLSSPTADQIDVGATLADAGPTFTIK
Ga0137420_13963452	3300015054	Vadose Zone Soil	MKATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATALTNPTADDVDAGNVLADAGPSFTVKVNRSWTLKI
Ga0134072_102162262	3300015357	Grasslands Soil	MNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTTLTSPTADQVEV
Ga0134072_103068651	3300015357	Grasslands Soil	MKATRFLLAAMVLATAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATSLTNPTADDVDAGNVIANDGPS
Ga0134074_13699481	3300017657	Grasslands Soil	MVLGTAIGVSQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSAATSLTNPTADDVDAGNVIANDGPS
Ga0180121_102011231	3300017695	Polar Desert Sand	MTSTRFVLAAMVLGTALVSNQANAQCSSNVGSCNTTNTASVSVGALVKLGMSSATTSLTAPTADDIDAGAVLQKAGPIFTIK
Ga0184604_102308491	3300018000	Groundwater Sediment	MKATRILAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSGTTTALTAPTADDIDVGAVIPNAGPTF
Ga0190272_102059882	3300018429	Soil	MNSTRFILAAMVLGTALGSKQANAQGCIGLGACSATNTASVSVGALVKLDMSSATTSLTSPDADDIDAGATLQDAGPTFTIKANRSWSLKIKSGNA
Ga0190275_110896132	3300018432	Soil	MNSTRFVLAAMVLGTALGSTKAYAQGCIGTGSCSATNTASVTVGALVKLGMSSATTTLSNPTADDIDAGATRQDAGPTFTIKAN
Ga0066662_121197111	3300018468	Grasslands Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGMSATATTLSSPTADQVDIGAT
Ga0066669_100292563	3300018482	Grasslands Soil	MKATRSLLAAMVLATAIGARTANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIAD
Ga0193705_10091491	3300019869	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSWTLNIKT
Ga0193712_10818481	3300019880	Soil	MNTTRILLAAMVLGSAIGATQANAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVEIGALLADAGPTFTVKANRSW
Ga0193729_10534064	3300019887	Soil	MKATRFLLAAMVLGSAISVSQANAQLQCSGNAGGCLVVNTASATVNALVKLTMSATTTTLSSPTADQIET
Ga0193751_10343562	3300019888	Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATTLTNPTADDVDAGNVLANDGPSFTVKANRSWTLKIKSQN
Ga0193731_10145914	3300020001	Soil	MKATRFLLAAMVLGSAISASQANAQLQCSGNAGGCLVVNTASATVNALVKLTMSATTTTLSSPTADQIETGAVLADLGPT
Ga0193755_10291761	3300020004	Soil	MNATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSNATALTNPTADNVDAG
Ga0193755_11834901	3300020004	Soil	MNATRFLLAAMVLGTAIAGNQANAQCSGNAGSCFTTNTASATVNALVKLGMGGVATTLTSPTADQIEIGASIANDGPTFTIKANRSWTLNIKTTAVSNWVYVGSFSGTKPISD
Ga0193721_10050462	3300020018	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGAL
Ga0210381_102597071	3300021078	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSATTTALTAPTADDIDAG
Ga0210382_102569281	3300021080	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSW
Ga0193709_10905162	3300021411	Soil	MNTTRILLAAMVLGSAIGATQANAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVEIGALLADAGPTFTVKANRS
Ga0222622_103259481	3300022756	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQVSAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGAVIADAGPTFTIKANRSWTLNLKTTNPTIWT
Ga0207929_10007448	3300025505	Arctic Peat Soil	MSATRYLLAAMVLGSAISVTQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTSTLSSPIADQVEIGTTLADAGPSFTIKANRSWTLNIPISRQPSEYFARDQNPSTFSL
Ga0207699_112791751	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRYLLAAMALGTAIGASEANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIADAGPT
Ga0207645_103396611	3300025907	Miscanthus Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKANRSWTLKIK
Ga0207654_108365551	3300025911	Corn Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIANAGPSFTI
Ga0207652_105437882	3300025921	Corn Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIANAGPSFTIKANRSWTLKIKSQNAANW
Ga0207687_112770871	3300025927	Miscanthus Rhizosphere	MNATRFILAAMVIGSAICVNQAEAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTTLSSPTADQVETGVTLADNGPSFTIKANR
Ga0207651_119544041	3300025960	Switchgrass Rhizosphere	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTTTLTSPTADQVEVGATLADAGPS
Ga0207675_1018956011	3300026118	Switchgrass Rhizosphere	MNATRYVLAAMVFGAAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTSLTSPTADQVEV
Ga0209470_13345801	3300026324	Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGMGATATTLSSPTADQIDIGATLADAGPTFTIKANRSWTLNIRTSNASNWTYVGS
Ga0209805_11257621	3300026542	Soil	MNATRFLLAAMVLGSAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMGSAATTLTSPTADQVEVGANLAD
Ga0209220_11788021	3300027587	Forest Soil	MRSTCFTIALCGVFVGAAPARAQCSGNAGTCNTTNTASLLIPALVKLGMSATTTSLTAPTADQVDLGAIIADAGPTFTVKANRSWTLNIKSGNPSNWTYA
Ga0209117_10396222	3300027645	Forest Soil	MNATRFLLPAVVVASVFGANQAEAQCSGSGSCNTTNTASVIVNALVKLGMGSTTTSLTSPTADQVEIGAVVPDNGPTFTIKANRSWTLNIK
Ga0209011_10447681	3300027678	Forest Soil	MKATRLLLAAMVLGTVIGASQSNAQGCSGANSCAGTNTAQVVVPALVKLAMTATTTSLTAPTADQVDLGATVGPDAGPTFTIKANRSWTLNIRSQNLTS
Ga0209073_101321402	3300027765	Agricultural Soil	MNATRFLAAMVLGTAIGVNQANAQCSGNAGSCNSTNTVSATVNALVKLGMSAATTTLSSPTADQVDVGANLADAGPTFTIKANRSWTLNIK
Ga0209180_102992112	3300027846	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATTLTNPTADDVDAGNVLANDGPSFTIKANRSWTLKIKS
Ga0209590_105947831	3300027882	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATTLTNPTADDVDAG
Ga0209526_101280034	3300028047	Forest Soil	MKATRILLAAMVFGTVISASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSGVATTLTSPTADDIEAGN
Ga0209526_102761271	3300028047	Forest Soil	MNATRYLLAAVVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLGMSAPATTLSSPTADQVEVGATLSDA
Ga0307276_101110101	3300028705	Soil	MNATRPFLAAMVLVSAIGVTQANAQCSGNAGSCNTTNTASVSVNALVKLGMGSATTSLTSPTADQVEVGANIADAGPNFTIKANRSW
Ga0307313_102421441	3300028715	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSWTLNI
Ga0307305_100221682	3300028807	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGIATSLTSPTADQIEAGALIADNGPTFTIKANRS
Ga0307294_102629601	3300028810	Soil	MNATRFLLAAMVLGTAIAGNQAYAQTCSGNAGSCNLTNTASATVNALVKLGISGAATTLTSPTADQIETGASIANDGPTFTIKANRSWSLNIKTSAVSNWGYVGSFS
Ga0307302_104059121	3300028814	Soil	MTATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGIATSLTSPTADQIEAGAVIADNGPSFTIKANRSWTLNIKTTNPT
Ga0307312_100104095	3300028828	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSWTLNIKTTNAT
Ga0307278_100333671	3300028878	Soil	MNATRFLLAAMVLGTAIGVEQVNAQCSGNAGSCNTTNTASVSVNALVKLGMGGVATSLTSPTADQIEAGALIADNGPSFTIKANR
Ga0308197_104471411	3300031093	Soil	MKATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSNATALTNPTADNVDAGNTLQNSGPTFSVKSNRSWTLKIKSNVATNWDYVGSD
Ga0307471_1023479112	3300032180	Hardwood Forest Soil	MNATRFILAAMVLGSAIGVNQASAQCSGNAGSCNTTNTVSASVNALVKLGMSTAATTLSSPTADQVEVGANLADAGPSFTIKANR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082827

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences