Metagenome Family F082667

Basic Information
Family ID	F082667
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	68 residues
Representative Sequence	MYQTTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Number of Associated Samples	91
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.54 %
% of genes near scaffold ends (potentially truncated)	36.28 %
% of genes from short scaffolds (< 2000 bps)	75.22 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (95.575 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (24.779 % of family members)
Environment Ontology (ENVO)	Unclassified (52.212 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.097 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1B570J40625_1000640174 2JGI25920J50251_100579242 3Ga0068876_105212952 4Ga0049081_101238752 5Ga0049081_102180361 6Ga0049080_101406162 7Ga0049082_100010593 8Ga0049084_103304722 9Ga0078894_104666283 10Ga0079957_10943032 11Ga0070743_101311211 12Ga0070744_102482442 13Ga0102861_10017772 14Ga0102861_10037173 15Ga0102861_10099002 16Ga0102874_11167942 17Ga0102875_10710311 18Ga0102875_12259831 19Ga0102879_11593941 20Ga0102828_10051063 21Ga0102915_12801151 22Ga0102919_10666852 23Ga0102923_10190372 24Ga0102896_11674801 25Ga0102863_10565321 26Ga0102863_12585861 27Ga0102878_11101552 28Ga0102865_10303411 29Ga0102876_12131701 30Ga0102902_10221041 31Ga0102859_12567381 32Ga0104988_1049312 33Ga0105745_10196623 34Ga0114363_10225441 35Ga0102829_11912152 36Ga0102830_11347701 37Ga0102812_108309341 38Ga0114977_100678692 39Ga0114970_102908842 40Ga0114979_102302531 41Ga0114969_101477422 42Ga0114974_105211171 43Ga0114976_103309162 44Ga0129333_100215407 45Ga0129333_103527983 46Ga0129333_108338432 47Ga0139557_10664782 48Ga0177922_111976881 49Ga0181362_10038163 50Ga0181365_10109991 51Ga0181358_11011411 52Ga0181346_10426251 53Ga0181348_12455452 54Ga0181359_10677382 55Ga0181359_11390352 56Ga0211732_11775011 57Ga0211732_12513794 58Ga0211736_1055523111 59Ga0211736_106616262 60Ga0211736_109837952 61Ga0211734_109672191 62Ga0211735_108346071 63Ga0208235_10131392 64Ga0214168_10800861 65Ga0213922_10785082 66Ga0222714_101522592 67Ga0222714_104533441 68Ga0222712_100644613 69Ga0222712_101407954 70Ga0222712_103823771 71Ga0181354_11505811 72Ga0181351_10612092 73Ga0214921_1000348724 74Ga0214921_102443883 75Ga0214921_104497712 76Ga0214923_101368994 77Ga0244775_100833403 78Ga0244775_101282392 79Ga0255074_10037761 80Ga0255090_10246271 81Ga0255067_10043635 82Ga0255066_10594532 83Ga0255081_10936711 84Ga0208926_10144071 85Ga0208307_10002016 86Ga0208307_10004411 87Ga0208306_100008418 88Ga0208164_10104822 89Ga0255096_10477231 90Ga0208923_10376842 91Ga0255094_10736222 92Ga0208966_10008196 93Ga0208975_11311881 94Ga0208975_12083031 95Ga0209297_10179477 96Ga0209297_11177103 97Ga0209596_11260972 98Ga0209088_104141201 99Ga0209770_102261871 100Ga0209768_102143831 101Ga0209500_102639361 102Ga0315293_105251002 103Ga0315294_114673912 104Ga0334982_0206125_293_502 105Ga0334982_0426280_194_403 106Ga0334992_0244402_637_846 107Ga0335004_0435122_563_733 108Ga0335004_0674457_1_204 109Ga0334987_0694058_36_248 110Ga0335019_0853067_290_508 111Ga0335028_0051258_844_1086 112Ga0335031_0031755_619_828 113Ga0335036_0417522_3_188
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1B570J40625_1000640174 2Ga0068876_105212952 3Ga0079957_10943032 4Ga0070744_102482442 5Ga0102896_11674801 6Ga0335004_0435122_563_733
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1B570J40625_1000640174 2Ga0068876_105212952 3Ga0079957_10943032 4Ga0070744_102482442 5Ga0102896_11674801 6Ga0335004_0435122_563_733
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.70% β-sheet: 20.29% Coil/Unstructured: 71.01%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF06067	DUF932	8.85
PF00850	Hist_deacetyl	1.77
PF11171	DUF2958	0.88
PF02562	PhoH	0.88
PF02732	ERCC4	0.88
PF01464	SLT	0.88
PF04542	Sigma70_r2	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.54
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.88
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.88
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.88
COG1948	ERCC4-type crossover junction endonuclease	Replication, recombination and repair [L]	0.88
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	4.42 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	3.54 %
Unclassified	root	N/A	95.58 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.77 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %
Unclassified	root	N/A	95.58 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	1.77 %

Name	Rank	Taxonomy	Distribution
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.77 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.77 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.77 %
Unclassified	root	N/A	95.58 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.77 %
Unclassified	root	N/A	95.58 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100064017	Not Available	4982	Open in IMG/M
3300003404\|JGI25920J50251_10057924	Not Available	995	Open in IMG/M
3300005527\|Ga0068876_10521295	Not Available	651	Open in IMG/M
3300005581\|Ga0049081_10123875	Not Available	955	Open in IMG/M
3300005581\|Ga0049081_10218036	Not Available	679	Open in IMG/M
3300005582\|Ga0049080_10140616	Not Available	811	Open in IMG/M
3300005584\|Ga0049082_10001059	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	8462	Open in IMG/M
3300005585\|Ga0049084_10330472	Not Available	503	Open in IMG/M
3300005662\|Ga0078894_10466628	Not Available	1136	Open in IMG/M
3300005805\|Ga0079957_1094303	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M

Showing 1 to 10 of 113 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.72%
Marine	Environmental → Aquatic → Marine	36.28%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	3.54%
Creek	Environmental → Aquatic → Freshwater → Creek	0.89%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	24.78%
Lake	Environmental → Aquatic → Freshwater → Lake	33.63%
Lentic	Environmental → Aquatic → Freshwater → Lentic	22.12%
River	Environmental → Aquatic → Freshwater → River	6.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.96%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.65%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	24.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.86%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.47%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.96%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	6.19%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	24.78%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.54%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.42%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.39%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.96%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	6.19%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.65%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	12.39%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.73%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.08%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.65%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.89%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.77%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1000640174	3300002835	Freshwater	MYKTTPEQSKTEAALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
JGI25920J50251_100579242	3300003404	Freshwater Lake	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGTIN*
Ga0068876_105212952	3300005527	Freshwater Lake	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPD
Ga0049081_101238752	3300005581	Freshwater Lentic	MYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0049081_102180361	3300005581	Freshwater Lentic	MYITTPEQSKTEAALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0049080_101406162	3300005582	Freshwater Lentic	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGSIN*
Ga0049082_100010593	3300005584	Freshwater Lentic	MYQTTPAQSKTETALAKKGFRFSSWLPFSPDANNQPSEGTESLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0049084_103304722	3300005585	Freshwater Lentic	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0078894_104666283	3300005662	Freshwater Lake	MYKTTPEQSKTETALAKKGFRFSRWLPFSPDANNQPSEGTEHLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0079957_10943032	3300005805	Lake	MYAPTEAQLAAEKRLEKKGFSFSNWLPHEPDGEGQPVKGTEHLGTMMMVKRTHRFSKEWREIEPDGTIN*
Ga0070743_101311211	3300005941	Estuarine	YITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH*
Ga0070744_102482442	3300006484	Estuarine	KKQQKITMYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0102861_10017772	3300007544	Estuarine	MYQTTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH*
Ga0102861_10037173	3300007544	Estuarine	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN*
Ga0102861_10099002	3300007544	Estuarine	VRDGKKQQKITMYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0102874_11167942	3300007546	Estuarine	MYQTTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH*
Ga0102875_10710311	3300007547	Estuarine	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFYTEYREIEPDGSIN*
Ga0102875_12259831	3300007547	Estuarine	VRDGKKQQKITMYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRVTRFSTEYREINPDGFIN*
Ga0102879_11593941	3300007549	Estuarine	MYETTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0102828_10051063	3300007559	Estuarine	MYQTTPAQSKSEAALVKKGFRFSRWLPFSPDANNEPSEGTEHLGTIVMVKRVSSFSAERLEIEPDGSIN*
Ga0102915_12801151	3300007562	Estuarine	MYQTTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0102919_10666852	3300007597	Estuarine	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTENLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0102923_10190372	3300007606	Estuarine	VRDGKKQQKNTMYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0102896_11674801	3300007618	Estuarine	MYQTTPAQSKSEAALVKKGFRFSRWLPFSPDANNEPAEGTEHLGTIVMVKRVSSFSAERLEIEPDGSIN*
Ga0102863_10565321	3300007622	Estuarine	RDGKKQQKITMYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0102863_12585861	3300007622	Estuarine	IAMYQTTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH*
Ga0102878_11101552	3300007624	Estuarine	MYQTTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0102865_10303411	3300007639	Estuarine	MYITTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH*
Ga0102876_12131701	3300007642	Estuarine	MYQTTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSQGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0102902_10221041	3300007644	Estuarine	AQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0102859_12567381	3300007708	Estuarine	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTE
Ga0104988_1049312	3300007735	Freshwater	MYQTTPEQAKTEASLAKKGFRFSSWIPFQPNAHGQPSEGTEHMGTIVMVKRVTRFSTEYREIEPDGSIN*
Ga0105745_10196623	3300007972	Estuary Water	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDAKNQPAQGTEHLGKIVMGKRITRFSTEYREIEPDGSIN*
Ga0114363_10225441	3300008266	Freshwater, Plankton	AAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN*
Ga0102829_11912152	3300009026	Estuarine	MYQTTPAQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTESLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0102830_11347701	3300009059	Estuarine	TTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0102812_108309341	3300009086	Estuarine	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH*
Ga0114977_100678692	3300009158	Freshwater Lake	MYQTTPAQSKSEAALVKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0114970_102908842	3300009163	Freshwater Lake	MYQTTPAQAKSETALSKKGFRFSNWIPFQPDANNQPSEGTESLGTIVMVKRATRFSTEYREINPDGTIN*
Ga0114979_102302531	3300009180	Freshwater Lake	TALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGSIN*
Ga0114969_101477422	3300009181	Freshwater Lake	MYQTTPAQSKSEAALAKKGFCFSRWLPFSPDANNEPSEGTEHLGTIVMVKRISSFSVERLEIEPDGSIN*
Ga0114974_105211171	3300009183	Freshwater Lake	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTEHLGTIVVVKRTTRFSTEYREIEPDGSIN*
Ga0114976_103309162	3300009184	Freshwater Lake	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHPGTIVMVKRVTRFSTEYREIEPDGSIN*
Ga0129333_100215407	3300010354	Freshwater To Marine Saline Gradient	MYKTTPEQSKTEAALAKKGFRFSSWLPFSPDANNQPSEGTEHLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0129333_103527983	3300010354	Freshwater To Marine Saline Gradient	YQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN*
Ga0129333_108338432	3300010354	Freshwater To Marine Saline Gradient	MCATVKTIKKTMYQTTAAQSKAETALNKKGFRFSTWLPFEPDANNQPAQGTEHLGIIVMVKRATRFSTEYREINPDGSIN*
Ga0139557_10664782	3300011010	Freshwater	QSKTETALAKKGFRFSSWLPFSPDANNQPSEGTESLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0177922_111976881	3300013372	Freshwater	MYITTPEQSKTEAALAKKGFRFSSWIPFQPNAENQPSEGTEHLGTIVMVKRATRFSTEYREIEPDGSIN*
Ga0181362_10038163	3300017723	Freshwater Lake	MYQTTPEQSKTETALAKKGFRFSSWIPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH
Ga0181365_10109991	3300017736	Freshwater Lake	TALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH
Ga0181358_11011411	3300017774	Freshwater Lake	TTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH
Ga0181346_10426251	3300017780	Freshwater Lake	MYITTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0181348_12455452	3300017784	Freshwater Lake	MYQTTPEQSKTETALAKKGFRFSSWIPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDG
Ga0181359_10677382	3300019784	Freshwater Lake	MYQTTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH
Ga0181359_11390352	3300019784	Freshwater Lake	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGTIN
Ga0211732_11775011	3300020141	Freshwater	MYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0211732_12513794	3300020141	Freshwater	MYQTTPEQAKTEASLAKKGFRFSSWIPFQPNAHGQPSEGTEHLGTIVMVKRVTRFSTEYREIEPDGSIN
Ga0211736_1055523111	3300020151	Freshwater	ETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGIIVMVKRATRFSTEYREINPDGFIN
Ga0211736_106616262	3300020151	Freshwater	ETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0211736_109837952	3300020151	Freshwater	MYQTTPEQAKTEASLAKKGFRFSSWIPFQPNAHGQPSEGTEHLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0211734_109672191	3300020159	Freshwater	SKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGIIVMVKRATRFSTEYREINPDGFI
Ga0211735_108346071	3300020162	Freshwater	MYQTTSAQAKSETALSKKGFRFSSWVPFQPDANNQPAQGTEHLGTIVMVKRATRFSTEYREINPDGFIN
Ga0208235_10131392	3300020530	Freshwater	MYKTTPEQSKTEAALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0214168_10800861	3300021140	Freshwater	MYITTPEQSKTEAALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0213922_10785082	3300021956	Freshwater	MYKTTPEQSKTEAALAKKGFRFSSWLPFSPDANNQPSEGTEHLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0222714_101522592	3300021961	Estuarine Water	MYQTTEAQSKSEAALRKRGFRFSAWLPFEPDAENQPAEGTEHLGTIVMVKRVTRFSTEYREINPDGFIN
Ga0222714_104533441	3300021961	Estuarine Water	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSQGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0222712_100644613	3300021963	Estuarine Water	MCATVKTIKKTMYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGIIVMVKRATRFSTEYREINPDGSIN
Ga0222712_101407954	3300021963	Estuarine Water	MYQTTEAQSKSEAALKKKGFRFSAWLPFEPDAENQPAEGTEHLGTIVMVKRVTRFSTEYREINPDGFIN
Ga0222712_103823771	3300021963	Estuarine Water	MYQTTAAQSKAETALNKKGFRFSTWLPFEPDANNQPAQGTEHLGIIVMVKRATRFSTEYREINPDGSIN
Ga0181354_11505811	3300022190	Freshwater Lake	MYITTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTD
Ga0181351_10612092	3300022407	Freshwater Lake	MYQTTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFST
Ga0214921_1000348724	3300023174	Freshwater	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREINPDGSIN
Ga0214921_102443883	3300023174	Freshwater	MYKTTPEQSKTEAALAKKGFRFSSWLPFSPDANNQPSEGTEHLGTIVMVKRATRFSSEYREIEPDGSIN
Ga0214921_104497712	3300023174	Freshwater	MYQTTPAQAKSETALSKKGFRFSSWVPFQPDANNQPSEGTESLGTIVMVKRATRFSTEYREINPDGTIN
Ga0214923_101368994	3300023179	Freshwater	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREINPDGS
Ga0244775_100833403	3300024346	Estuarine	MYQTTPAQSKSEAALVKKGFRFSRWLPFSPDANNEPSEGTEHLGTIVMVKRVSSFSAERLEIEPDGSIN
Ga0244775_101282392	3300024346	Estuarine	MYITTPEQSKTETALAKKGFRFSSWVPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIH
Ga0255074_10037761	3300027121	Freshwater	MYQTTEAQSKSETALKKKGFRFSSWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0255090_10246271	3300027123	Freshwater	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN
Ga0255067_10043635	3300027129	Freshwater	YQTTEAQSKSETALKKKGFRFSSWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0255066_10594532	3300027131	Freshwater	TAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN
Ga0255081_10936711	3300027155	Freshwater	QSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN
Ga0208926_10144071	3300027205	Estuarine	MYQTTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTE
Ga0208307_10002016	3300027211	Estuarine	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0208307_10004411	3300027211	Estuarine	RDGKKQQKITMYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0208306_100008418	3300027214	Estuarine	VRDGKKQQKITMYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0208164_10104822	3300027224	Estuarine	MYQTTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0255096_10477231	3300027302	Freshwater	TMYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN
Ga0208923_10376842	3300027320	Estuarine	MYQTTPAQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTESLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0255094_10736222	3300027494	Freshwater	YQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN
Ga0208966_10008196	3300027586	Freshwater Lentic	MYQTTPAQSKTETALAKKGFRFSSWLPFSPDANNQPSEGTESLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0208975_11311881	3300027659	Freshwater Lentic	AMYITTPEQSKTEAALAKKGFRFSSWIPFQPNAENQPSEGTEHLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0208975_12083031	3300027659	Freshwater Lentic	YQTTPAQAKSETALSKKGFRFSNWIPFQPDANNQPSEGTESLGTIVMVKRATRFSTEYREINPDGSIN
Ga0209297_10179477	3300027733	Freshwater Lake	MYQTTPAQSKSEAALVKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0209297_11177103	3300027733	Freshwater Lake	ETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGSIN
Ga0209596_11260972	3300027754	Freshwater Lake	MYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYR
Ga0209088_104141201	3300027763	Freshwater Lake	TALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGSIN
Ga0209770_102261871	3300027769	Freshwater Lake	IDIAMYKTTPEQSKTETALAKKGFRFSRWLPFSPDANNQPSEGTEHLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0209768_102143831	3300027772	Freshwater Lake	MYQTTPEQSKTETALAKKGFRFSSWIPFQPTAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0209500_102639361	3300027782	Freshwater Lake	IGIAMYITTPEQSKTETALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0315293_105251002	3300031746	Sediment	MYQTTPQQSKTETALAKKGFRFSSWIPFQPNAENQPSQGTETLGTIVMVKRATRFSTEYREIQPDGSIN
Ga0315294_114673912	3300031952	Sediment	MYQTTPQQSKTETALAKKGFRFSSWVPFQPNAENQPSQGTETLGTIVMVKRATRFSTEYREIEPDGSIN
Ga0334982_0206125_293_502	3300033981	Freshwater	MYQTTPAQAKSETALSKKGFRFSNWIPFQPDANNQPSEGTESLGTIVMVKRATRFSTEYREINPDGTIN
Ga0334982_0426280_194_403	3300033981	Freshwater	MYQTTEAQSKSETALKKKGFRFSAWLPFEPDANNQPAQGTEHLGTIVMVKRITRFSTEYREIEPDGSIN
Ga0334992_0244402_637_846	3300033992	Freshwater	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRATRFSTEYREINPDGSIN
Ga0335004_0435122_563_733	3300034021	Freshwater	ALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGSIN
Ga0335004_0674457_1_204	3300034021	Freshwater	MYQTTAAQSKAETALGKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGSI
Ga0334987_0694058_36_248	3300034061	Freshwater	MYQTTPAQAKSETALSKKGFRFSNWIPFQPDANNQPSEGTESLGTIVMVKRATRFSAERLEIEPDGSVLY
Ga0335019_0853067_290_508	3300034066	Freshwater	KITLYQTTEAQSKSETALKKKGFRFSAWLPFEPDAENQPAEGTEHLGVIVMVKRATRFSTEYREINPDGFIN
Ga0335028_0051258_844_1086	3300034071	Freshwater	MCATVKTIKKTMYQTTAAQSKAETALNKKGFRFSTWLPFEPDANNQPAQGTEHLGIIVMVKRATRFSTEYREINPDGSIN
Ga0335031_0031755_619_828	3300034104	Freshwater	MYQTTPAQAKSETALSKKGFRFSTWLPFEPDANNQPAQGTEHLGTIVMVKRVTRFSTEYREIEPDGSIN
Ga0335036_0417522_3_188	3300034106	Freshwater	SKTEAALAKKGFRFSSWIPFQPNAENQPSEGTETLGTIVMVKRATRFSTEYREIEPDGSI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082667

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences