Metagenome / Metatranscriptome Family F082506

Overview

Basic Information

• Family ID: F082506
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 113
• Average Sequence Length: 47 residues
• Representative Sequence: GVLILLGRAFAATVRESGHPRMIVGGLVALLGVIVLLTYLGVELPRE
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 113

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 4.55 %
• % of genes near scaffold ends (potentially truncated): 92.04 %
• % of genes from short scaffolds (< 2000 bps): 91.15 %
• Associated GOLD sequencing projects: 94
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (87.611 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (7.965 % of family members)
• Environment Ontology (ENVO): Unclassified (31.858 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (46.018 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 48.00%
  β-sheet: 0.00%
  Coil/Unstructured: 52.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF03734	YkuD	60.18
PF12229	PG_binding_4	16.81
PF01368	DHH	4.42
PF02272	DHHA1	2.65
PF08241	Methyltransf_11	0.88
PF05425	CopD	0.88
PF04392	ABC_sub_bind	0.88
PF01145	Band_7	0.88
PF13328	HD_4	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	60.18
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	60.18
COG1276	Putative copper export protein	Inorganic ion transport and metabolism [P]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.61 %
Unclassified	root	N/A	12.39 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.61 %
Unclassified	root	N/A	12.39 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.61 %
Unclassified	root	N/A	12.39 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.42 %
Unclassified	root	N/A	12.39 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Unclassified	root	N/A	12.39 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7.96 %
Unclassified	root	N/A	12.39 %

Level 7

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.31 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.88 %
Unclassified	root	N/A	12.39 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.54 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.31 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.88 %
Unclassified	root	N/A	12.39 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.31 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.88 %
Unclassified	root	N/A	12.39 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.31 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.88 %
Unclassified	root	N/A	12.39 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.88 %

Level 11

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.31 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.88 %
Unclassified	root	N/A	12.39 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000955|JGI1027J12803_105677846	All Organisms → cellular organisms → Bacteria	963
3300000956|JGI10216J12902_103096115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	824
3300000956|JGI10216J12902_110582325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1299
3300000956|JGI10216J12902_113851222	All Organisms → cellular organisms → Bacteria	1372
3300002568|C688J35102_117984788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520
3300002568|C688J35102_120303103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	978
3300003990|Ga0055455_10022026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1573
3300004081|Ga0063454_100757886	Not Available	742
3300004081|Ga0063454_101993940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513
3300004081|Ga0063454_102047464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.22%
Host-Associated	Host-Associated	24.78%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	0.89%
Plants	Host-Associated → Plants	24.78%
Terrestrial	Environmental → Terrestrial	74.34%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.58%
Roots	Host-Associated → Plants → Roots	0.89%
Soil	Environmental → Terrestrial → Soil	74.34%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.54%
Loam	Environmental → Terrestrial → Soil → Loam	17.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.08%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.31%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.65%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.77%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1056778462	3300000955	Soil	GRAFAATVRESGHPRLILGGLAALVGVIVLLTYLGVELPRE*
JGI10216J12902_1030961152	3300000956	Soil	MAPLIVIAVGVVGAVFILLARGFVETVRESGHPRLIVGGLAALVGLIVLLTYLGVELPREGG*
JGI10216J12902_1105823252	3300000956	Soil	MAPLIVVAVGVVAAVFILLGRGLVETVRESGHPRLIVGGLAALVGLIVLLTYLGVELPREGG*
JGI10216J12902_1138512222	3300000956	Soil	MAPLIVFAVGIAAGVFILLGRGFAQTVRESGHPRLIVGGLVALVGAIVLLTYLGVELPREGG*
C688J35102_1179847881	3300002568	Soil	VLILLGRAFAVTVRESGHPRLIVAGLVGLGCAIAVLTYLGVELPRE*
C688J35102_1203031033	3300002568	Soil	LIVIAVGVTAAIFILLGRGLAQSIRESPHPRLIVGSLVALAGLIVVLTYLGVELPREGG*
Ga0055455_100220263	3300003990	Natural And Restored Wetlands	AGVLILLGRAFAATVRESGHPRWILGGLLAVVGAVVVLTWLGVQLPRE*
Ga0063454_1007578861	3300004081	Soil	GLVGAVVILLGRAFAATVREAGHPKWIYGGLAALVAAVFVLTWLGVELPRE*
Ga0063454_1019939402	3300004081	Soil	IAVGVTAAIFILLGRGLAQSIRESPHPRLIVGSLVALAGLIVVLTYLGVELPREGG*
Ga0063454_1020474642	3300004081	Soil	LILLGRAFAVTVRESGHPRWILAGLAALFGAVVVLTYLGVELPRE*
Ga0062589_1003635742	3300004156	Soil	GRAFATNVRESGHKRAIVAGLVALAGAVVVLTYLGVELPRE*
Ga0066677_108493381	3300005171	Soil	AQNVRESGHRRLIYAGFVALLGIVALLTYLGVQLPREGG*
Ga0066684_106874121	3300005179	Soil	VLGVLILLGRAFVNSVRESGHKRAIVAGLVVLAGAVVVLTYLGVQLPRE*
Ga0070682_1016695061	3300005337	Corn Rhizosphere	ALVVGAGLVAGVLILLGRAFVVTVRESGHPRLIYAGLVGLAAVIVLLTYLGIELPREG*
Ga0068868_1013118732	3300005338	Miscanthus Rhizosphere	GLIAAVFILLGRALAVTIRESGHPRWILGGLVALAGAIVLLTYLGVELPRE*
Ga0070708_1000352055	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LLGRAFAETVRDARHPRWIVGGLLALAGAIVLLTYLGVQLPRE*
Ga0070681_106519502	3300005458	Corn Rhizosphere	GLVAGVLILLGRAFVVTVRESGHPRLIYLGLAGLAVAIVVLTYLGVELPREG*
Ga0070739_100204411	3300005532	Surface Soil	GVLILLGRAFAESVRSWGHPRLLAAGLVALLGVVVLLTWLGISLPRE*
Ga0070734_106568432	3300005533	Surface Soil	VLGTGLVLGVMILLGRAFAATVREAQHPRVIMGGLVLVVGAVVLMTWLGVTLPRE*
Ga0068853_1001345411	3300005539	Corn Rhizosphere	FADSVRQSGHPRLIVGGLVALAGLIVLLTYLGVSLPKEG*
Ga0066670_109956161	3300005560	Soil	VVGAGLVGGVLILLGRAFAVTVRESGHPRLIYLGLLGLAAAIVVLTYLGVELPREG*
Ga0068855_1001120684	3300005563	Corn Rhizosphere	LLGRAFVVTVRESGHPRLIYAGLVGLAAVIVLLTYLGIELPREG*
Ga0070664_1007347202	3300005564	Corn Rhizosphere	ALVVGAGLVGGVLILLGRAFAVTVRESGHPRLIYLGLLGLAAAIVVLTYLGVELPREG*
Ga0070664_1013005381	3300005564	Corn Rhizosphere	LLGRGFVVTVRESGHPRLIYIGLIAMAGAIVVLTYLGVELPRE*
Ga0066903_1010556773	3300005764	Tropical Forest Soil	LLGRAFMATVRESGHPRWIWGGVAVVVALVCLLTWLGVQLPRE*
Ga0066903_1014547203	3300005764	Tropical Forest Soil	VLLPALVLGIGLILGVLILLGRAFADTVRESAHPRWIVAGLVALAGAVILLT
Ga0066903_1027103842	3300005764	Tropical Forest Soil	AIVGAGLVAGIFILLGRAFMETVRESGHPRWILGGLVALLGAIVLLTYLGVELPRE*
Ga0066903_1056264712	3300005764	Tropical Forest Soil	VGLVAGVAILLGRAFMATVRESGHPRWVWGGVAVVVVLVCVLTWLGVDLPKE*
Ga0068851_104073441	3300005834	Corn Rhizosphere	IVGAGLVGAVFILLGRAFADSVRQSGHPRLIVGGLVALAGLIVLLTYLGVSLPKEG*
Ga0070717_110477282	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LGRAFAETVRESSHPRLILGGLVALVGVIVLLTYLGVSLPRE*
Ga0066656_110761091	3300006034	Soil	SVRESGHKRAIVAGLVVLAGAVVVLTYLGVQLPRE*
Ga0066652_1002031931	3300006046	Soil	LARGLVETIRESGHPRWIVAALVAVVGLVVLLTYLGVELPREGG*
Ga0075432_103211371	3300006058	Populus Rhizosphere	LGRAFVYSARESGHKRLIYAGLAALAVLIVFMTYLGVELPREGG*
Ga0079222_114524312	3300006755	Agricultural Soil	VRESGHKRVIVAGLAALAAAVVVLTYLGVQLPRE*
Ga0079221_113112801	3300006804	Agricultural Soil	AGVLIVLGRAFASSVRDSGHKRLIVAGLVALAGAVVLLTYLGVQLPRE*
Ga0079220_115419831	3300006806	Agricultural Soil	TVRESGHPRLVYLGLLGLAGAIVLLTYLGVELPRE*
Ga0075424_1012509001	3300006904	Populus Rhizosphere	FVHSVRESGHKRAIIAGLFVLAGAVVVLTYLGVELPRE*
Ga0105243_110544392	3300009148	Miscanthus Rhizosphere	VLGVLILLGRAFADSVRSAEHPRWIVGGLVALAGAIVLLTYLGVELPRE*
Ga0075423_130116211	3300009162	Populus Rhizosphere	VFILLGRAFAQSVRESGHKRAILAGLALVVAAVVVLTYLGVELPKE*
Ga0105238_127622922	3300009551	Corn Rhizosphere	AFAVTVRESGHPRLIYLGLAGLAVAIVVLTYLGVELPREG*
Ga0126304_111099603	3300010037	Serpentine Soil	IFILLGRGLVQSIRESPHPRLIVGSLVALAGLIVVLTYLGVELPREGG*
Ga0126309_105697621	3300010039	Serpentine Soil	TIRESPHPRLIVGSLVALAGLIVVLTYLGVELPREGG*
Ga0126310_115042091	3300010044	Serpentine Soil	LVQSIRESPHPRLIVGSLVALAGLIVVLTYLGVELPREGG*
Ga0126373_120608171	3300010048	Tropical Forest Soil	GVAILLGRAFMATVRESGHPRWVWGGVAVVVVLVCVLTWLGVDLPRE*
Ga0134109_101156713	3300010320	Grasslands Soil	VLGVLILLGRAFAHSVRESGHKRAIIAGLVAVVAAVVVLTYLG
Ga0134125_120446941	3300010371	Terrestrial Soil	AGLVAGVLILLGRAFVVTVRESGHPRLIYLGLVGLAAAIVILTYLGVELPREG*
Ga0105239_112418062	3300010375	Corn Rhizosphere	GAGLVGAVFILLGRAFADSVRQSGHPRLIVGGLVALAGLIVLLTYLGVSLPKEG*
Ga0126383_115388002	3300010398	Tropical Forest Soil	VVGAGLVAGVAILLGRAFMATVRESGHPRWIWGGVAVVVALVCLLTWLGVELPRE*
Ga0126383_125588672	3300010398	Tropical Forest Soil	GGGLILGVLILLGRAFASNVRESGHKRVIVAGLVVLAGAVVVLTYLGVELPRE*
Ga0134121_104567422	3300010401	Terrestrial Soil	VGGGLVLGVLILLGRAFADSVRSAEHPRWIVGGLVALAGAIVLLTYLGVELPRE*
Ga0134121_128403382	3300010401	Terrestrial Soil	GVLILLGRAFAATVRESGHPRMIVGGLVALLGVIVLLTYLGVELPRE*
Ga0120163_10354243	3300012003	Permafrost	AGLVGAVFILLGRAFAASVRESGHPRLIIGGLVALCGLIVLLTYLGVSLPKEG*
Ga0120152_10411191	3300012011	Permafrost	IGAGLVFGVLILLGRAFAVTVRESGHPRLIVAGLLGLAGVIVLLTYLGVQLPRE*
Ga0137375_101187075	3300012360	Vadose Zone Soil	VIAVGVTAAIFILLGRGLVQSVRESGHPRIIVGALVALAGVIVLLTYLGVELPREGG*
Ga0137361_118298231	3300012362	Vadose Zone Soil	VVVLLGRAFADSVRESGHPRLIVGGLVALAGVIVLLTYLGVSLPKEG*
Ga0157332_10357731	3300012511	Soil	IVFAVGIAIGVFILLGRGFVQTVRESGHPRLIVGGLVALAGVIVLLTYLGVELPREGG*
Ga0137359_112033452	3300012923	Vadose Zone Soil	AVFILLGCAFAASVRESGHPRLIVGGLVALAGLIVLLTFLGVTLPKEG*
Ga0164299_105783623	3300012958	Soil	FATLIVLGRALAHSVRESGHRRVIYVGFVALAGVVALLTYLGVELPRE*
Ga0134087_102969692	3300012977	Grasslands Soil	GRAFVNSVRESGHKRAIVAGLVVLAGAVVVLTYLGVQLPRE*
Ga0164304_109603852	3300012986	Soil	FASTVRESGHPRWVWGGVAVLVGLVVLLTWLGVQLPRE*
Ga0164307_105591013	3300012987	Soil	VLGVMILLGRAFAATVRESGHPRLILGGLVAVFGAVVLLTWLGIELPRE*
Ga0157373_108676961	3300013100	Corn Rhizosphere	GTGLVAGVLILLGRAFAVTVRESGHPRLIYIGLLGLAAAIVILTYLGIELPREG*
Ga0157370_111308111	3300013104	Corn Rhizosphere	LILLGRAFADTVRESGHPRWIVGAMAALVGAILVLTWLGVSLPRE*
Ga0157375_103471101	3300013308	Miscanthus Rhizosphere	AGLIGAVLILLGRALAVTIRESGHPRWILGGLVALAGAIVLLTYLGVELPRE*
Ga0120158_103881661	3300013772	Permafrost	FILLGRAFATSVRESGHPRLVIGGLVALGVVIGILTWLGVTLPREG*
Ga0134078_102765552	3300014157	Grasslands Soil	ATVRESNHPRLILGAVAAVFGAVLLLTWLGIELPRE*
Ga0132257_1018047701	3300015373	Arabidopsis Rhizosphere	VLILLGRAFVESVRESGHQRLIYAGLAVLAVFIGVLTYLGVELPREGG*
Ga0187785_106269982	3300017947	Tropical Peatland	VLGAGLVLGVLILLWRAFLVTVRESGHPRLIWGGVAVVVGLVVLLTWLGVDLPRE
Ga0187777_105643472	3300017974	Tropical Peatland	FMATVRESTHPRWILGAVAALAGVIALLTWLGVQLPRE
Ga0187787_101216491	3300018029	Tropical Peatland	IGGGIALGILILLGRAFADNVRESGHKRVVIAALVGLVAAVVVLTYLGVQLPKE
Ga0187773_110132332	3300018064	Tropical Peatland	AAVLILLGRALAQSVRESGHPRVIFAGFVALAGAVALLTYLGVELPRE
Ga0206352_105275552	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	LVVGVGLVGGVLILLGRAFADTVRESGHPRWIVGAMAALVGAILVLTWLGVSLPRE
Ga0193719_100228593	3300021344	Soil	LGRAFAHSLRESGHKRLILASLGVLVGAVVVLTYLGVELPKE
Ga0193699_101197771	3300021363	Soil	VRESGHPRLIVGGLIALAGVIVLLTFLGVTLPKEG
Ga0213874_104381181	3300021377	Plant Roots	VAGVLILLGRGFVYSIRESGHPRWIYVGLVGLAAAIGFLTYLGVSLPRE
Ga0193694_10420941	3300021415	Soil	GAVLILLGRALGVTIRESGHPRWIVGGLIALAGAIVVLTYLGVELPRE
Ga0224712_101217632	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	GGGLVAGVLIILGRAFANSVRESGHKRLIVAGLVVLAGAVVVLTYLGVQLPRE
Ga0247677_10383082	3300024245	Soil	AVLILLGRAFADSVRESGHPRLIAGGAVALVGVVVLLTWLGVQLPRE
Ga0247692_10525561	3300024279	Soil	GRAFAASVRESGHPRVIIGGLVALAALIVLLTYLGVSLPKEG
Ga0207699_112771422	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	NSVRESGHKRLIVAGLVVLAGAIVVLTYLGVQLPRE
Ga0207705_105818902	3300025909	Corn Rhizosphere	QTVRESGHPRWILAGLAAMVGAIVVLTYLGVELPRE
Ga0207707_100157125	3300025912	Corn Rhizosphere	VRESGHPRLIYAGLVGLAAVIVLLTYLGIELPREG
Ga0207693_109008261	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LLGRAFAATVRESGHPRLILGGLVAVFGAVVLLTWLGIELPRE
Ga0207660_107713371	3300025917	Corn Rhizosphere	VLILLGRAFAVTVRESGHPRLIVAAVVGLAGAIVLLTFLGVELPRE
Ga0207694_116799122	3300025924	Corn Rhizosphere	AFAVTVRESGHPRLIYLGLAGLAVAIVVLTYLGVELPREG
Ga0207664_102889493	3300025929	Agricultural Soil	VLILLGRAFAATVRESGHPRLILGGVVAVLGAVVLLTWLGINLPRE
Ga0207664_109953422	3300025929	Agricultural Soil	ILLGRAFAVTVRESGHPRLIYLGLLGLVGAIALLTYLGVELPRE
Ga0207709_115118542	3300025935	Miscanthus Rhizosphere	GIGVIAAVLILLGRAFVESVRESGHQRLIYAGLAVLAVFIGVLTYLGVELPREGG
Ga0207678_114614951	3300026067	Corn Rhizosphere	LILLGRAFAVTVRESGHPRLIYVGLLGLAAAIVILTYLGIELPREG
Ga0207683_100773431	3300026121	Miscanthus Rhizosphere	VVGIGLVGGVLILLGRALAVTIRESGHPRWIVSGLVALAGAIVLLTYLGVELPRE
Ga0209801_10650651	3300026326	Soil	GLGLVGGMLILLGRAFVETMREARHPRWIVGGLIALAGAIVLLTYLGVELPRE
Ga0247823_113426652	3300028590	Soil	IGLIAAVLILLGRAFVESVRESGHQRLIYAGLAVVAVFIAVLTYLGVELPREGG
Ga0307322_101892262	3300028710	Soil	LAVTIRESGHPRWILGGLVALAGAIVLLTYLGVELPRE
Ga0265338_104471732	3300028800	Rhizosphere	FVVGGGLVLAVLILLGRAFADSIRGLKHKRLWLLGSVALLGVIVLLTYLGVSLPKEE
Ga0265338_107622912	3300028800	Rhizosphere	SAFAASVRESGHPRWVWAGLAGLVGAVIVLTYLGVSLPRE
Ga0265331_105101261	3300031250	Rhizosphere	VLAVLILLGRAFADSIRGLKHKRLWLLGSVALLGVIVLLTYLGVSLPKEE
Ga0265316_109395862	3300031344	Rhizosphere	GLILGVLILLGRAFAESVRESGHKRLLMAGLVALTGVVVILTYLGVSLPRE
Ga0307408_1020312761	3300031548	Rhizosphere	VRESGHPRLIVGGLVALAGLIVVLTYLGVELPREGG
Ga0318528_103736292	3300031561	Soil	ILLGRAFMATVRESGHPRILWGGVAVVVGLVVLLTWLGVELPRE
Ga0318572_104407812	3300031681	Soil	AFADTVRESTHPRWIVAGLVALAGAVILLTWLGVSLPRE
Ga0310813_116838542	3300031716	Soil	GVVILLGRAFAQTLRESGHKRAILAGLAAVVAAVVVLTYLGVELPRE
Ga0307469_122319441	3300031720	Hardwood Forest Soil	VRESGHKRLIVSGLVVITIAVIVLTYLGVQLPREGG
Ga0307405_107235653	3300031731	Rhizosphere	VMAPLIVIAVGVSAAVLILLGRGLVQSVRESGHPRLIVGGLVALAGLIVVLTYLGVELPREGG
Ga0318552_107260462	3300031782	Soil	VGIVLATGIVLVRAMAQTVRESGHPRWFYAGFVALAGAIALLTYLGVQLPREGG
Ga0318527_104249182	3300031859	Soil	GAGLVLGVMILLGRAFMATVRESGHPRILWGGVAVVVGLVVLLTWLGVELPRE
Ga0308176_112890101	3300031996	Soil	LGRAFAVTVRESGHPRLIYAGLLGLAVAIVILTYLGIELPREG
Ga0308176_115877252	3300031996	Soil	AHSVRESGHKRAIVAGLVVVAGAVVVLTYLGVELPRE
Ga0308176_129754351	3300031996	Soil	LLGRALAVTIRESGHPRWIVSGLVALAGAIVLLTYLGVELPRE
Ga0306922_104238841	3300032001	Soil	GAVLILLGRAFADSVRDWGHPRLLAAGAVTLVAVVVVLTWLGVSLPRE
Ga0318563_102717691	3300032009	Soil	VLGTGLILGVLILLGRAFADTVRESTHPRWIVAGLVALAGAVILLTWLGVSLPRE
Ga0335085_106730272	3300032770	Soil	GVMILLGRAFMATVRESGHPRALWGGVAVIVGLVVLLTWLGVQLPRE
Ga0335078_122662512	3300032805	Soil	DSVRDSAHPRWILGGVVALVGAVVLLTWLGIQLPRE
Ga0335083_108271402	3300032954	Soil	QTVRESGHPRWFYAGFVVLAGAIALLTYLGVELPREGG