Metagenome Family F082307

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082307
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	62 residues
Representative Sequence	VREARAEYYTLTGKGVGATLAGSEVGFDQRNTRYKHGYRSFECWPDTVDPRGVKGK
Number of Associated Samples	87
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	85.84 %
% of genes from short scaffolds (< 2000 bps)	84.07 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.841 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.159 % of family members)
Environment Ontology (ENVO)	Unclassified (26.549 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.76% β-sheet: 11.90% Coil/Unstructured: 83.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF03739	LptF_LptG	19.47
PF12867	DinB_2	3.54
PF12535	Nudix_N	2.65
PF04392	ABC_sub_bind	2.65
PF02566	OsmC	1.77
PF00512	HisKA	0.88
PF01041	DegT_DnrJ_EryC1	0.88
PF13472	Lipase_GDSL_2	0.88
PF00005	ABC_tran	0.88
PF01527	HTH_Tnp_1	0.88
PF14417	MEDS	0.88
PF13683	rve_3	0.88
PF13565	HTH_32	0.88
PF00496	SBP_bac_5	0.88
PF06441	EHN	0.88
PF12697	Abhydrolase_6	0.88
PF07883	Cupin_2	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	19.47
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.65
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.77
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.77
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.88
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.88
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.88
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.88
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.88
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.84 %
Unclassified	root	N/A	13.27 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.84 %
Unclassified	root	N/A	13.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	68.14 %
Unclassified	root	N/A	13.27 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	68.14 %
Unclassified	root	N/A	13.27 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	68.14 %
Unclassified	root	N/A	13.27 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.88 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	54.87 %
Unclassified	root	N/A	13.27 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.88 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	50.44 %
Unclassified	root	N/A	13.27 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	4.42 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.88 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	50.44 %
Unclassified	root	N/A	13.27 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	4.42 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.88 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	50.44 %
Unclassified	root	N/A	13.27 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	4.42 %
Caulobacter sp. 17J80-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. 17J80-11	0.88 %
Nitrospira sp. CG24D	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. CG24D	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0521370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1065858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300000890\|JGI11643J12802_12327531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1059	Open in IMG/M
3300000955\|JGI1027J12803_109160159	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1496	Open in IMG/M
3300002908\|JGI25382J43887_10141782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1230	Open in IMG/M
3300002908\|JGI25382J43887_10362982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300004268\|Ga0066398_10204410	Not Available	523	Open in IMG/M
3300005172\|Ga0066683_10527299	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	721	Open in IMG/M
3300005174\|Ga0066680_10637760	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300005440\|Ga0070705_100655392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	819	Open in IMG/M
3300005445\|Ga0070708_100437036	Not Available	1234	Open in IMG/M
3300005467\|Ga0070706_102009773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300005468\|Ga0070707_100290546	Not Available	1588	Open in IMG/M
3300005468\|Ga0070707_101724722	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300005518\|Ga0070699_100194310	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1803	Open in IMG/M
3300005518\|Ga0070699_100942300	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005536\|Ga0070697_100496612	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300005536\|Ga0070697_100512509	Not Available	1050	Open in IMG/M
3300005536\|Ga0070697_102142482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300005553\|Ga0066695_10253999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1110	Open in IMG/M
3300005561\|Ga0066699_10780846	Not Available	674	Open in IMG/M
3300005561\|Ga0066699_11026129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300005586\|Ga0066691_10341266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	886	Open in IMG/M
3300005713\|Ga0066905_100164182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1618	Open in IMG/M
3300005713\|Ga0066905_100473448	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300005764\|Ga0066903_100636832	All Organisms → Viruses → Predicted Viral	1860	Open in IMG/M
3300005764\|Ga0066903_100893357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1606	Open in IMG/M
3300005764\|Ga0066903_101448322	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300005764\|Ga0066903_103508169	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005841\|Ga0068863_102432292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300006845\|Ga0075421_100689922	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300006847\|Ga0075431_100821939	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. CG24D	902	Open in IMG/M
3300006847\|Ga0075431_101510723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	630	Open in IMG/M
3300006852\|Ga0075433_10319093	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1375	Open in IMG/M
3300006852\|Ga0075433_10406102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	1202	Open in IMG/M
3300006854\|Ga0075425_100127536	All Organisms → cellular organisms → Bacteria	2907	Open in IMG/M
3300009038\|Ga0099829_11310433	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300009143\|Ga0099792_11124178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300009792\|Ga0126374_10045274	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300010358\|Ga0126370_10187507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1549	Open in IMG/M
3300010358\|Ga0126370_11791993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300010358\|Ga0126370_12635979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300010360\|Ga0126372_11254049	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	768	Open in IMG/M
3300010361\|Ga0126378_10358546	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	1568	Open in IMG/M
3300010361\|Ga0126378_11577727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
3300010361\|Ga0126378_13090650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300010362\|Ga0126377_10527135	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300010362\|Ga0126377_13340911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300010366\|Ga0126379_12416602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	625	Open in IMG/M
3300011269\|Ga0137392_10923114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300012199\|Ga0137383_10587152	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300012202\|Ga0137363_10276566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1372	Open in IMG/M
3300012361\|Ga0137360_11605750	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300012685\|Ga0137397_10123848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1905	Open in IMG/M
3300012922\|Ga0137394_10726390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	835	Open in IMG/M
3300012929\|Ga0137404_11796015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300012944\|Ga0137410_12098124	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300012948\|Ga0126375_11256429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	620	Open in IMG/M
3300012975\|Ga0134110_10464202	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300015245\|Ga0137409_10022647	All Organisms → cellular organisms → Bacteria	6162	Open in IMG/M
3300015245\|Ga0137409_10605038	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	926	Open in IMG/M
3300015374\|Ga0132255_100473784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	1836	Open in IMG/M
3300016319\|Ga0182033_10930759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	771	Open in IMG/M
3300016371\|Ga0182034_10032646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3269	Open in IMG/M
3300016371\|Ga0182034_10701907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	860	Open in IMG/M
3300016404\|Ga0182037_10717396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	857	Open in IMG/M
3300016422\|Ga0182039_10113814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2026	Open in IMG/M
3300016422\|Ga0182039_11288807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300017944\|Ga0187786_10107015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	951	Open in IMG/M
3300018064\|Ga0187773_10153663	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	1189	Open in IMG/M
3300018468\|Ga0066662_12826633	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300025910\|Ga0207684_10011331	All Organisms → cellular organisms → Bacteria	7804	Open in IMG/M
3300026296\|Ga0209235_1165980	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300026313\|Ga0209761_1017355	All Organisms → cellular organisms → Bacteria	4563	Open in IMG/M
3300026326\|Ga0209801_1175376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	885	Open in IMG/M
3300026335\|Ga0209804_1252145	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300026542\|Ga0209805_1116779	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1263	Open in IMG/M
3300027874\|Ga0209465_10068314	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300031226\|Ga0307497_10289887	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	746	Open in IMG/M
3300031545\|Ga0318541_10718944	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	558	Open in IMG/M
3300031573\|Ga0310915_10692661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	719	Open in IMG/M
3300031720\|Ga0307469_10957537	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300031720\|Ga0307469_12403720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300031736\|Ga0318501_10733811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300031740\|Ga0307468_101024932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. 17J80-11	728	Open in IMG/M
3300031744\|Ga0306918_11414241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300031751\|Ga0318494_10769603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300031782\|Ga0318552_10216226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	971	Open in IMG/M
3300031805\|Ga0318497_10814420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	524	Open in IMG/M
3300031820\|Ga0307473_10821375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	665	Open in IMG/M
3300031835\|Ga0318517_10241886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	814	Open in IMG/M
3300031845\|Ga0318511_10443731	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300031879\|Ga0306919_11237352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	566	Open in IMG/M
3300031890\|Ga0306925_10768455	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1003	Open in IMG/M
3300031954\|Ga0306926_12542442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300031959\|Ga0318530_10118502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1062	Open in IMG/M
3300031981\|Ga0318531_10557780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300032035\|Ga0310911_10057185	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2048	Open in IMG/M
3300032055\|Ga0318575_10185557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1042	Open in IMG/M
3300032059\|Ga0318533_10811050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300032180\|Ga0307471_101764963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	771	Open in IMG/M
3300032205\|Ga0307472_100147097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	1714	Open in IMG/M
3300033290\|Ga0318519_10895849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.92%
Host-Associated	Host-Associated	7.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.92%
Plants	Host-Associated → Plants	7.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.80%
Loam	Environmental → Terrestrial → Soil → Loam	20.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_05213701	3300000033	Soil	REAHAEYHTLTGKGIGATLAGSKVGFDQRNTRFKLGYRNFECWPESVDPRGPKRK*
AF_2010_repII_A01DRAFT_10658581	3300000580	Forest Soil	SWKKVTAMAAKSDCDDHRMRDARAEYSTLTGNGVRATLTGSEVGFDQKNTRFKRGYRRFECWPDTVDPRGAKGK*
JGI11643J12802_123275313	3300000890	Soil	AAKSDCEQRGVSEARAEYHTLTGKGIRATLSGSKVGFHQPHKRFTHGYRNFECWPD
JGI1027J12803_1091601594	3300000955	Soil	LEEFTVTVAKSDCDDRRVREARAEYYELTGKGVWATLAGSEVGFDQSNTRYKRGYHSFECWPDTVDPRGPKTK*
JGI25382J43887_101417822	3300002908	Grasslands Soil	EYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
JGI25382J43887_103629821	3300002908	Grasslands Soil	DGYWKKVTATAAKSDCDDRTVREARAEYYTLTGQGVGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGPKGK*
Ga0066398_102044101	3300004268	Tropical Forest Soil	AAKSDCEDRSVNEARAEYDALTGRGIRAILAGSKVGFNQRNTRFTQGYRNFACYPDSVDPRGSTER*
Ga0066683_105272991	3300005172	Soil	CDDRTVREARAEYYALTGKGVGATLAGVGFDQRNTRYKHGYRRFECWPDTVDPRGPKGK*
Ga0066680_106377601	3300005174	Soil	YTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGPKGK*
Ga0070705_1006553922	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DRTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
Ga0070708_1004370361	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GIGATLAGSQVGFDQSNTRYRRGYHSFECWPDTLDPRGPKVK*
Ga0070706_1019625181	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGPKGK*
Ga0070706_1020097731	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EYYTLSGKGIGATLAGSEVGFDQKNTRFKRGYRSFECWSGTADPRRARGNER*
Ga0070707_1002905464	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	CDDRTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYRRGYHSFECWPDTVDPRGPKVK*
Ga0070707_1017247221	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	CDDRTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGPKGK*
Ga0070698_1002427611	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WEHSYEVWVDSNKESHRRDGYWKKVTATAAKADCDDLTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
Ga0070699_1001943101	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ESHRRDGYWKKVTATAAKADCDDRTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
Ga0070699_1009423002	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GKGIRVTLADSEVGFDQRNTRFTHGYHRFECWPDTVDPSGPKRK*
Ga0070697_1004966121	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SDCDDRRVREARAEYDTLTGQGVGATLAGSEVGFDQKNTRFKRGYRSFECWPGTADPRRARANER*
Ga0070697_1005125091	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AEYYTLTGQGIGATLAGSQVGFDQSNTRYRRGYHSFECWPDTLDPRGPKVK*
Ga0070697_1021424821	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
Ga0066695_102539994	3300005553	Soil	VTATAAKSDCDDRTVREARAEYYTLTGKGVGATLAGSEVGFDQRNTRYKHGYRSFECWPDTVDPRGVKGRAR*
Ga0066699_107808463	3300005561	Soil	AKSDCDDRTVREARAEYYTLTGRGVGATLTGSKVGFDQSNTTYKRGYHSFECLPDTVDPRGVKGK*
Ga0066699_110261292	3300005561	Soil	HRRDGYWKKVTATAAKADCDDRTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
Ga0066691_103412662	3300005586	Soil	VREARAEYYELTGKGVGATLAGSEVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
Ga0066905_1001641821	3300005713	Tropical Forest Soil	DRAASEARVEYDTLTGKGARATLMGSQVAFDQQKTRFTHGYRRFECWPDTVDPRGPKAK*
Ga0066905_1004734482	3300005713	Tropical Forest Soil	TPAKSDCDSRTLNEARAEYYALIGKGVRAILAGSEVGFDQRNTRFRQGYRKFECLPDTVDPREPRAK*
Ga0066903_1006368321	3300005764	Tropical Forest Soil	VNEARAEYDGLTGEGIRAILAGSKVGFNQRNTRFTQGYRSFECYPDTVDPRGPKGK*
Ga0066903_1008933575	3300005764	Tropical Forest Soil	ATTATKADCKDRSVNEARAEYDALTGQGIRATLAGSTVGFHQRNTRFTQGYRNFACYPDTVDPREPKGK*
Ga0066903_1014483221	3300005764	Tropical Forest Soil	VNEARAEYDALAGQGIRATLARSTVGFNQRNTRFMQGYRSFECWPDAVDLRGPKGK*
Ga0066903_1035081692	3300005764	Tropical Forest Soil	ALTGQGIRATLAGSTVGFDQRNTRFTHGYRNFACYPDTVDPRRPKEK*
Ga0068863_1024322921	3300005841	Switchgrass Rhizosphere	KVATTGAKSDCESRGAREARAEYDTLTGKGVRATLAGSKVAFDQRKTRFTRGYRTFECWPDTVDPRAPKGK*
Ga0075421_1006899222	3300006845	Populus Rhizosphere	TLAGKGIRVSLAGSKVGFEQRNTRFRHAYRNFECRPDTADPRGPKGK*
Ga0075431_1008219392	3300006847	Populus Rhizosphere	NATTAKSDCDDRRVREARAEYYALTGQGVRATLTGSQVGFDQRNTRYKRGYRSFECWPDTVDPRRPKGK*
Ga0075431_1015107233	3300006847	Populus Rhizosphere	VRESRAEYYTLSGKGIGATLAGSEVGFDQKSTRFKRGYRSFECWPGTADPRRARGK*
Ga0075433_103190933	3300006852	Populus Rhizosphere	VSEARAEYYTLSGKGIGATLAGSEVGFDQKNTRFKRGYRSFECWPGTADPRRARGK*
Ga0075433_104061022	3300006852	Populus Rhizosphere	REARAEFDTLTGKGIGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPVGAKGK*
Ga0075425_1001275361	3300006854	Populus Rhizosphere	WKRVASTSAKSDCESRGLREARAEYDTLTGKGIRATLAGSKVAFDQRKTRFTRGYRNFECWPATVDPRTPKGK*
Ga0099829_113104331	3300009038	Vadose Zone Soil	RVREARAEYYTLTGNGVGATLAGSEVGFDQKNTRFKRGYRSFECWPGTADPRRARANER*
Ga0099792_111241782	3300009143	Vadose Zone Soil	LTAAKADCDDRTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHRFECWPDTVDPRGPKGK*
Ga0126374_100452741	3300009792	Tropical Forest Soil	TGKGVRATLTGSEVGFNQRNTRFTHGYRRFECYPATVDPRGPKGK*
Ga0126382_113215561	3300010047	Tropical Forest Soil	DTYRRDVTWKKVALIVAKADCNDRATREARAEYDTLTGKGVRATLSGSEVGFDQKNTRFRKGYRKFECWPDTVDPRGAKAKER*
Ga0126370_101875073	3300010358	Tropical Forest Soil	VAWKKVAATAAKSDCEDRSVNEARAEYDALTGRGIRAILVGSKVGFNQRNTRFTQGYRNFACYPDTVDPRGPKGK*
Ga0126370_117919931	3300010358	Tropical Forest Soil	NQQRRTVSWKRVTVMAARTDCDDGRMREARAEFDLLTGKGVGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPRKAKRK*
Ga0126370_126359791	3300010358	Tropical Forest Soil	KKVAAMPAKSGCEERALSEARAEYDALAGTSTRATLTGAQVGFDQRNTRFTRGYRRFECWPDTVDPRGAKGK*
Ga0126372_112540491	3300010360	Tropical Forest Soil	CEDRSVNEARAEYDALTGQGIRATLAGSTVGFNQRNTRFTQGYRNFACYPDTMDPRGPKGGAR*
Ga0126378_103585462	3300010361	Tropical Forest Soil	RAEFDLLTGKGVGATLTGSEVGFNQRNTRFKRGYRSFECWPDTIDPKRAKGK*
Ga0126378_115777272	3300010361	Tropical Forest Soil	LIVAKADCNDRATREARAEYDTLTGKGVRATLSGSEVGFDQKNTRFRKGYRKFECWPDTVDPRGPKAKP*
Ga0126378_130906501	3300010361	Tropical Forest Soil	RAEYYTLIGRGMRATLSGSEVGFDQINKRFKQGYRKFECWPDTVDPRGPKGK*
Ga0126377_105271352	3300010362	Tropical Forest Soil	TAAKADCKDRAAQEARADYDALTGKGVRATLTGSEVGFNQRNTRFTHGYRRFECYPATVDPRGPKGK*
Ga0126377_133409111	3300010362	Tropical Forest Soil	SDCEDRSVNEARAEYDALAGQGIRATLAGSTVGFNQRNTRFTHGYRNFACYPDTVDPRGVKGK*
Ga0126379_100531146	3300010366	Tropical Forest Soil	WKKIAATAAKSDCQDRSVNEARAEYDGLTGEGIRAILTGSTVGFDQRTTRFTQGYRSFECYPDTVDPRRAKER*
Ga0126379_124166021	3300010366	Tropical Forest Soil	RAEFDLLTGKGVGATLTGSEVGFDQRNTRFKRGYRSFECWPGAVDPTKTKGK*
Ga0137392_109231141	3300011269	Vadose Zone Soil	DCDDRTVREARAEYYTLTGKGVGATLAGSEVGFDQRNTRYKHGYRSFECWPDTVDPRGGKGK*
Ga0137383_105871522	3300012199	Vadose Zone Soil	SIGYGFLSDRTVREARAEYYDLTGRGVGATLAGSEVGFDQSNTRYKRGYHSFECWPDTVDPRGPTGK*
Ga0137363_102765661	3300012202	Vadose Zone Soil	VAWKKVTATAAKSDCDDRTVREARAEYYTLTGRGVGATLTGSKVGFDQSNTRYKRGYHSFECLPDTVDPRGVKGK*
Ga0137360_116057501	3300012361	Vadose Zone Soil	RDGAWKKVKATTAKSDCDDRRVREARAEYYTLTGQGVRATLAGSQVGFDQKNRRYKRGYRSFECWPDTVDPRGVKGK*
Ga0137397_101238481	3300012685	Vadose Zone Soil	DVAWKKVNAATAKSDCDDRRVREARAEYYTLTGQGIGATLTGSEVGFDQSNTRYKHGYRSFECWPATVDPRGVKGAPR*
Ga0137394_107263903	3300012922	Vadose Zone Soil	QGIGATLAGSEVGFNQSNTRYKHGYRSFECWPATVDPRGVKRAPR*
Ga0137404_117960151	3300012929	Vadose Zone Soil	CDDRRVREARAEYYELTGKGVGATLAGSEVGFDQSNTRYKRGYHRFECFPDTVDPRGPKGAPR*
Ga0137410_120981241	3300012944	Vadose Zone Soil	RDVAWKKVNAATAKSDCDDRRVREARAEYYTLTGQGIGATLAGSEVGFNQSNTRYKHGYRSFECWPATVDPRGVKRAPR*
Ga0126375_112564291	3300012948	Tropical Forest Soil	AVATRTDCDDRRMREARAEFDLLTGKGVGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPTKAKRE*
Ga0134110_104642021	3300012975	Grasslands Soil	EYYTLTGKGVRATLVGSKVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK*
Ga0137409_1002264710	3300015245	Vadose Zone Soil	RDVAWKKVNAATAKSDCDDRRVREARAEYYTLTGQGIGATLAGSEVGFDQSNTRYKHGYRSFECWPATVDPRGVKGK*
Ga0137409_106050381	3300015245	Vadose Zone Soil	KSDCDDRRVREARAEYYTLTGQGIGATLAGSEVGFNQSNTRYKHGYRSFECWPATVDPRGVKRAPR*
Ga0132255_1004737841	3300015374	Arabidopsis Rhizosphere	TVLAARADCDDRRVREARAEFDTLTGKGIGATLTGSEVGFDQHNTRFKRGYRSFECWPDTVDPIGAKGK*
Ga0182033_109307591	3300016319	Soil	NKNQQRRTVSWKRVTVMAARTDCDDRRMREARAEFDLLTGKGIGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPMRAKGK
Ga0182034_100326461	3300016371	Soil	RVTVVPARPDCDDRRMREARAEFDLLTGKGIGAKLKGSEVGFDQRNTRFKRGYRSFECWPDTVDPMRAKGK
Ga0182034_107019072	3300016371	Soil	DRRMREARTEFDLLTGRGVGATLTGSEVGFNQRNTRFKRGYRSFECWPDTVDPKGAKGK
Ga0182037_107173961	3300016404	Soil	EFDLLTGKGVGATLTGSEVGFNQRNTRFKRGYRSFECWPDTIDPIRAKGK
Ga0182039_101138145	3300016422	Soil	EYYTLIGRGMRVTLSGSEVGFDQINKRFKQGYRKFECWPDTVDPRGRKGK
Ga0182039_112888072	3300016422	Soil	EYYTLIGRGMRVTLSGSEVGFDQINKRFKQGYRKFECWPDTEDPRGAKGK
Ga0187786_101070151	3300017944	Tropical Peatland	NLSWKRVTVLASPSDCDDRKLREARAEFDLLTGKGVAAALTDSEVAFDQRNTRFKRGYRSFECWPATMDPTRAKHK
Ga0187773_101536631	3300018064	Tropical Peatland	VLASPSDCDDRKLREARAEFDLLTGKGVAAALTDSEVAFDQRNTRFKRGYRSFECWPDTMDPTRAKHK
Ga0066662_128266331	3300018468	Grasslands Soil	VREARAEYYTLTGKGVGATLAGSEVGFDQRNTRYKHGYRSFECWPDTVDPRGVKGK
Ga0207684_100113311	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGPKGK
Ga0207646_114643823	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGPKGK
Ga0207646_119298692	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK
Ga0209235_11659802	3300026296	Grasslands Soil	EARAEYYTLTGKGVGATLAGSEVGFDQRNTRYKHGYRSFECWPDTVDPRGVKGK
Ga0209761_10173551	3300026313	Grasslands Soil	YTLTGKGVGATLAGSEVGFDQRNTRYKHGYRSFECWPDTVDPRGVKGK
Ga0209801_11753761	3300026326	Soil	DCDDRTVREARAEYYTLTGQGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK
Ga0209804_12521451	3300026335	Soil	TLTGRGIGATLAGSQVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK
Ga0209805_11167793	3300026542	Soil	HRRDVAWKKVTATAAKSDCDDRTVREARAEYYTLTGRGVGATLTGSKVGFDQSNTTYKRGYHSFECLPDTVDPRGVKGK
Ga0209388_12002522	3300027655	Vadose Zone Soil	YEVWIDTNKDSHRRDVAWKKVNAATAKSDCDDRRVREARAEYYTLTGQGIGATLAGSEVGFDQSNTRYKHGYRSFECWPATVDPRGVKGK
Ga0209465_100683141	3300027874	Tropical Forest Soil	SAKSDCDERRVRDARAEYHTLTGKGVRATLAGSEVGFDQKNTRFKRGYRRFECWPDTVDPRGPKGK
Ga0307497_102898871	3300031226	Soil	TGKRVGATLTGSEVGFDQTNTRYTRGYRSFECWPDTVDPRGVKGK
Ga0318541_107189442	3300031545	Soil	LLTGKGIGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPMRAKGK
Ga0310915_106926611	3300031573	Soil	MREARAEFDLLTGKGIGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPMRAKGK
Ga0307469_109575372	3300031720	Hardwood Forest Soil	AEYYTMTGRGVGATLTGSKVGFDQSNTRYKRGYHSFECLPDTVDPRGEKGK
Ga0307469_120767732	3300031720	Hardwood Forest Soil	INKVSHRRDVAWKKISTMTAKTDCDDRRVHEARAEYDSLTGKLVGATLTSSEVGFDQSNTRYKRGYRRFECWPDTVDPRRK
Ga0307469_124037201	3300031720	Hardwood Forest Soil	EYYELTGKGAGATLAGSEVGFDQSNTRYKRGYHSFECWPDTVDPRGAKGK
Ga0318501_107338111	3300031736	Soil	YDTLTGKEVRANLAGSEVGFDQRNTRFTHGYRKFECWPDTVDPRGAKGK
Ga0307468_1010249321	3300031740	Hardwood Forest Soil	RVREARAEYYELTGKGVGATLADSEVGFDQSNTRYKRGYHSFQCWPDTVDPRGPKGK
Ga0306918_114142412	3300031744	Soil	KADCNGRAVSEARAEYSTLTGKGVAATLSGSEVGFNQKNTRFNRGYRRFDCYPDSVDPRGPKGT
Ga0318494_107696031	3300031751	Soil	VTWKKVAATPAKSDCDARTLSEARAEYYTLIGRGMRATLSGSEVGFDQINKRFKQGYRKFECWPDTVDPRGPKGK
Ga0318552_102162261	3300031782	Soil	REARAEFDLLTGKGIGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPMRAKGK
Ga0318497_108144201	3300031805	Soil	RRMREARAEFDLLTGKGVGATLTGSEVGFNQRNTRFKRGYRSFECWPDTVDPKGAKGK
Ga0307473_108213752	3300031820	Hardwood Forest Soil	ATKSDCDDRRVREARAEYYELTGKGAGATLAGSEVGFDQSNTRYKRGYHSFECWPDSVDPRGSKGK
Ga0318517_102418862	3300031835	Soil	DDRRMREARAEFDLLTGKGIGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPMRAKGK
Ga0318511_104437311	3300031845	Soil	ADCNNRAVSEARAEYDTLTGKEVRANLAGSEVGFDQRNTRFTHGYRKFECWPDTVDPRGAKGK
Ga0306919_112373522	3300031879	Soil	VPARTDCDDRRMREARAEFDLLTGKGVGATLTGSEVGFNQRNTRFKRGYRSFECWPDTIDPIRAKGK
Ga0306925_107684551	3300031890	Soil	DVAWKKVAATVAKADCNGRAVSEARAEYSTLTGKGVAATLSGSEVGFNQKNTRFNRGYRRFDCYPDSVDPRGPKGT
Ga0318536_101806453	3300031893	Soil	WVDKNKENHRRDVTWKKVAATPAKSDCDARTLSEARAEYYTLIGRGMRATLSGSEVGFDQINKRFKQGYRKFECWPDTEDPRGAKGK
Ga0306926_125424421	3300031954	Soil	WTKVAAMAAKADCNNRAVSEARAEYDTLTGKEVRANLAGSEVGFDQRNTRFTHGYRKFECWPDTVDPRGAKGK
Ga0318530_101185021	3300031959	Soil	YSTLTGKGVAATLSGSEVGFNQKNTRFNRGYRRFDCYPDSVDPRGPKGK
Ga0318531_105577801	3300031981	Soil	EARAEFDLLTGKGIGATLTGSEVGFDQRNTRFKRGYRSFECWSDTVDPMRAKGK
Ga0310911_100571851	3300032035	Soil	KRVTVVPARTDCDDRRMREARAEFDLLTGKGVGATLTGSEVGFNQRNTRFKRGYRSFECWPDTIDPIRAKGK
Ga0318575_101855572	3300032055	Soil	REARTEFDLLTGKGVGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPKRAKGK
Ga0318575_105902972	3300032055	Soil	NKENHRRDVTWKKVAATPAKSDCDARTLSEARAEYYTLIGRGMRATLSGSEVGFDQINKRFKQGYRKFECWPDTEDPRGAKGK
Ga0318533_108110502	3300032059	Soil	EYYTLIGRGMRVTLSGSEVGFDQINKRFKQGYRKFECWPDTVDPRGPKGK
Ga0307471_1017649633	3300032180	Hardwood Forest Soil	ATTAKSDCDNRTVDEAQAEYSILTGTGIGATLAGSKVGFHQSNTRYTYGYRSFECWPDTVDPRRPKGK
Ga0307472_1001470972	3300032205	Hardwood Forest Soil	TLTGTRVGATLTGSEVGFDQRNTRFKRGYRSFECWPDTVDPIGAKGK
Ga0318519_108958491	3300033290	Soil	RDVAWKKVAATVAKADCNGRAVSEARAEYSTLTGKGVAATLSGSEVGFNQKNTRFNRGYRRFDCYPDSVDPRGPKGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082307

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences