Basic Information | |
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Family ID | F082302 |
Family Type | Metagenome |
Number of Sequences | 113 |
Average Sequence Length | 50 residues |
Representative Sequence | AARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Number of Associated Samples | 89 |
Number of Associated Scaffolds | 113 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 83 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.327 % of family members) |
Environment Ontology (ENVO) | Unclassified (66.372 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (51.327 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 22.45% Coil/Unstructured: 77.55% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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Soil Vadose Zone Soil Tropical Forest Soil Soil Soil Soil Soil Tropical Forest Soil Tabebuia Heterophylla Rhizosphere Populus Endosphere Populus Rhizosphere Miscanthus Rhizosphere Switchgrass Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
INPhiseqgaiiFebDRAFT_1016018743 | 3300000364 | Soil | GVEYQHFEVSNQHAFCVNPGCAVPSIRDFDLNTRGDIARARLTIKTQGYGFLWSGPAATY |
Ga0063455_1015296352 | 3300004153 | Soil | VLGVEYQHFDVSAQGAFCVNPGCLPLAVRDFALSARGDLVRARLTIKTQGYGL* |
Ga0066395_106845152 | 3300004633 | Tropical Forest Soil | AARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG* |
Ga0066672_104380842 | 3300005167 | Soil | LGVEYQHFDVNGARAFCVHPGCAPPAVRDFDLSATGDLVRARLTVKTGGYSTVR* |
Ga0066388_1040715462 | 3300005332 | Tropical Forest Soil | DVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG* |
Ga0066388_1064303611 | 3300005332 | Tropical Forest Soil | ARAFCVNPGCAVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG* |
Ga0066388_1078626782 | 3300005332 | Tropical Forest Soil | QHFEVSEQAAFCVNPGCLPLSVRDFALSARGDLVRARLTMKTQGYGFLWGGPAAGN* |
Ga0066903_1006417281 | 3300005764 | Tropical Forest Soil | VEYQHFDLNGARAFCVRPGCNPPAVRDFDLSATGDLVRARLTFKTQGFFLVR* |
Ga0066903_1071844342 | 3300005764 | Tropical Forest Soil | ARAFCVNPGCVRPAVRDFDLSASGDIVRARLTIKTHGFGFGPPAGVGG* |
Ga0066903_1084456961 | 3300005764 | Tropical Forest Soil | AARAFCVNPGCAVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG* |
Ga0081455_108906292 | 3300005937 | Tabebuia Heterophylla Rhizosphere | VEYQHFEVSNQHAFCVNPGCAVPSIRDFDLNARGDIARARLTIKTQGYGFLWSGPAATY* |
Ga0075365_102903332 | 3300006038 | Populus Endosphere | LGVEYQHFELSGERAFCVNPGCVVPAVRDYDLSSRGDLVRARLTIKTQGYGFL* |
Ga0075421_1021613602 | 3300006845 | Populus Rhizosphere | QHFDVNGARAFCVHPGCAPPAVRDFDLSAAGDLVRARMTIKTQGYLLAAGRQ* |
Ga0075435_1016545331 | 3300007076 | Populus Rhizosphere | FCVNPGCVVPAVRDFDLSASGDIVRARLAVKTHGFGFSPPGGVGG* |
Ga0126374_109696311 | 3300009792 | Tropical Forest Soil | GCLVPAVRDFDLSASGDIVRARLTVKTHGFGFSPPGGVGG* |
Ga0126384_111665041 | 3300010046 | Tropical Forest Soil | YQHFDVGAARAFCVNPGCLVPAVRDFDLSASGDIVRARLTVKTHGFDFGPPGGTGG* |
Ga0126384_118713702 | 3300010046 | Tropical Forest Soil | GVEYQHFDVGAARAFCVNPGCLVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGAGG* |
Ga0126373_123356391 | 3300010048 | Tropical Forest Soil | YQHFDVGAARAFCVNPGCAVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG* |
Ga0126370_123091882 | 3300010358 | Tropical Forest Soil | FCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG* |
Ga0126376_108365702 | 3300010359 | Tropical Forest Soil | LVDVILGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG* |
Ga0126378_111730671 | 3300010361 | Tropical Forest Soil | AFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGHGFGPPAGAGG* |
Ga0126377_102455963 | 3300010362 | Tropical Forest Soil | YQHFDVAAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGAGG* |
Ga0126377_119206071 | 3300010362 | Tropical Forest Soil | PAVRDFDLSASGDIVRARLTIKTHGFGFGPSGGVGG* |
Ga0126383_115404512 | 3300010398 | Tropical Forest Soil | CAVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG* |
Ga0124850_11228892 | 3300010863 | Tropical Forest Soil | GVYYPHFDVGAARAFCVNPGCAVPAVRDFDPSASGDIVRARLTVKTHGFGFGPPGGAGG* |
Ga0137374_100286096 | 3300012204 | Vadose Zone Soil | GVEYQHFDVNGARAFCVHPGCAPPAVRDFDLSATGDLVRARLSIKTQGTQGYLLAAGRQ* |
Ga0137374_106537252 | 3300012204 | Vadose Zone Soil | GVEYQHFDVNGARAFCVHPGCAPPAVRDFDLSATGDLVRARVTVKTQGYLLAGGRQ* |
Ga0137362_101988923 | 3300012205 | Vadose Zone Soil | VNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPAGGVGG* |
Ga0137368_109687571 | 3300012358 | Vadose Zone Soil | YQHFDVNGARAFCVHPGCAPPAVRDFDLSATGDLVRARVTIKTQGYLLAAGRQ* |
Ga0137375_102727961 | 3300012360 | Vadose Zone Soil | PGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPARGVGG* |
Ga0157375_114979492 | 3300013308 | Miscanthus Rhizosphere | VEYQHFDVSGSPAFCVNPGCAVASVRDFDLSARGDLVRARLTIKTQGYRL* |
Ga0182036_103981251 | 3300016270 | Soil | ARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFAPPAGVGG |
Ga0182041_105722591 | 3300016294 | Soil | DVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0182035_118989612 | 3300016341 | Soil | ALVDVILGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0182032_120066232 | 3300016357 | Soil | LGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0182034_104367801 | 3300016371 | Soil | AARAFCVNPGCVVPAVRDFDLSASGDIVRARLTIKTHGFGFGPPGGVGG |
Ga0182040_102744713 | 3300016387 | Soil | VPAVRDFDLSATGDIVRARLTIKTHGYGFAPPAGVGG |
Ga0182039_104779402 | 3300016422 | Soil | VPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0182038_106304222 | 3300016445 | Soil | CVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0126371_108637663 | 3300021560 | Tropical Forest Soil | YQHFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGHGFGPPAGAGG |
Ga0207681_115394511 | 3300025923 | Switchgrass Rhizosphere | SATDPARVEYQHFDVSGSPAFCVNPGCAVASVRDFDLSARGDLVRARLTIKTQGYRL |
Ga0207651_113391902 | 3300025960 | Switchgrass Rhizosphere | VDVVLGVEYQHFDVSGSPAFCVNPGCAVASVRDFDLSARGDLVRARLTIKTQGYRL |
Ga0209466_10321511 | 3300027646 | Tropical Forest Soil | CVVPAVRDFDLSASGDIVRARLTIKTHGFGFGPSGGVGG |
Ga0209382_110421871 | 3300027909 | Populus Rhizosphere | QHFDVNGARAFCVHPGCAPPAVRDFDLSAAGDLVRARMTIKTQGYLLAAGRQ |
Ga0307282_104466751 | 3300028784 | Soil | FDVSGSPAFCVNPGCAVAAVRDFDLSARGDLVRARLTIKTQGYGLWGSSPTGTY |
Ga0307290_102699681 | 3300028791 | Soil | VLGVEYQHFDVSGSPAFCVNPGCAVAAVRDFDLSARGDLVRARLTIKTQGYGLWGSSPTGTY |
Ga0318516_100577134 | 3300031543 | Soil | GAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGLPAGVGG |
Ga0318516_100586081 | 3300031543 | Soil | GAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFAPPAGVGG |
Ga0318534_100478914 | 3300031544 | Soil | VEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0318541_101841661 | 3300031545 | Soil | GCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0318541_104395551 | 3300031545 | Soil | CVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318541_108746062 | 3300031545 | Soil | VPAVRDFDLSASGDIVRARLTVKTHGFGFSPPGGVGG |
Ga0318528_101802631 | 3300031561 | Soil | PAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318528_107135922 | 3300031561 | Soil | HFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318573_101067113 | 3300031564 | Soil | GCIVPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318555_100892913 | 3300031640 | Soil | VEYQHFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG |
Ga0318572_102582563 | 3300031681 | Soil | PGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG |
Ga0318560_108221601 | 3300031682 | Soil | VEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318496_105069671 | 3300031713 | Soil | DVILGVEYQHFDVGAAGAFCVNPGCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0306917_108548861 | 3300031719 | Soil | AARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0306917_115590462 | 3300031719 | Soil | AARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318493_100873041 | 3300031723 | Soil | RAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGLPAGVGG |
Ga0318500_100462701 | 3300031724 | Soil | GVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG |
Ga0318500_104359082 | 3300031724 | Soil | LGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0318500_104636882 | 3300031724 | Soil | FCVNPGCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0306918_100326021 | 3300031744 | Soil | VGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0306918_100445945 | 3300031744 | Soil | HFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG |
Ga0318502_100260055 | 3300031747 | Soil | AARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFAPPAGVGG |
Ga0318521_102404791 | 3300031770 | Soil | NPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGLPAGVGG |
Ga0318521_106431892 | 3300031770 | Soil | GVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTIKTHGFGFGPPGGVGG |
Ga0318546_101433773 | 3300031771 | Soil | AVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318546_110979772 | 3300031771 | Soil | LVDVILGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318498_101063223 | 3300031778 | Soil | PGCIVPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318529_103121031 | 3300031792 | Soil | GVEYQHFDVSAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTIKTHGFGFSPPGGVGG |
Ga0318557_100352041 | 3300031795 | Soil | VNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG |
Ga0318557_103832912 | 3300031795 | Soil | VLGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFSPPGGVG |
Ga0318576_104689452 | 3300031796 | Soil | NPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318550_101525013 | 3300031797 | Soil | LGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG |
Ga0318550_104104261 | 3300031797 | Soil | VEYQHFDVGAARAFYVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0318523_101120543 | 3300031798 | Soil | PGCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318565_101978291 | 3300031799 | Soil | VEYQHFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFAPPAGVGG |
Ga0318568_104421711 | 3300031819 | Soil | VPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318568_109463121 | 3300031819 | Soil | VILGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318567_103404961 | 3300031821 | Soil | ARAFCVNPGCIVPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318499_101313032 | 3300031832 | Soil | VEYQHFDVGAARAFCVNPGCIVPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0310917_102781812 | 3300031833 | Soil | AAGAFCVNPGCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318527_101624382 | 3300031859 | Soil | LGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTIKTHGFGFGPPGGVGG |
Ga0306919_101922361 | 3300031879 | Soil | AFCVNPGCIVPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318544_102086151 | 3300031880 | Soil | RAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0306925_110350902 | 3300031890 | Soil | VPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0306925_113210341 | 3300031890 | Soil | VVPAVRDFDLSASGDIVRARLTIKTHGFGFGPPGGVGG |
Ga0318536_101773172 | 3300031893 | Soil | GCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318536_102663651 | 3300031893 | Soil | VVPAVRDFDLSASGDIVRARLTIKTHGFGFGPSGGVGG |
Ga0318522_101111772 | 3300031894 | Soil | GALVDVILGVEYQHFDVGAAGAFCVNPGCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0310912_113764312 | 3300031941 | Soil | YQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0310913_111162122 | 3300031945 | Soil | GVEYQHFDVGAAGAFCVNPGCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0306926_102131824 | 3300031954 | Soil | GAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0306926_105732681 | 3300031954 | Soil | GAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVGG |
Ga0318531_100980163 | 3300031981 | Soil | VEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTIKTHGFGFGPPGGVGG |
Ga0318531_103634271 | 3300031981 | Soil | PAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318563_105325772 | 3300032009 | Soil | YQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0318569_104032811 | 3300032010 | Soil | EYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
Ga0310911_108717362 | 3300032035 | Soil | FCVNPGCIVPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318559_100640453 | 3300032039 | Soil | AARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGLPAGVGG |
Ga0318549_101410463 | 3300032041 | Soil | PGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGLPAGVGG |
Ga0318556_102653891 | 3300032043 | Soil | ILGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSASGDIVRARLTIKTHGFGFGPPGGVG |
Ga0318532_100762072 | 3300032051 | Soil | NPGCIVPAVRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318533_103641382 | 3300032059 | Soil | NPGCVVPAVRDFDLSASGDIVRARLTIKTHGFGFGPPGGVGG |
Ga0318510_101075961 | 3300032064 | Soil | RAFCVNPGCIVPAVRRDFDLSASGDIVRARLTVKTHGFGFGLPGGVGG |
Ga0318514_101210481 | 3300032066 | Soil | ILGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFGPPAGVG |
Ga0318525_103100402 | 3300032089 | Soil | LGVEYQHFDVGAARAFCVNPGCVVPAVRDFDLSATGDIVRARLTIKTHGYGFAPPAGVGG |
Ga0318518_102792832 | 3300032090 | Soil | AFCVNPGCVVPAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGVGG |
Ga0318577_103399271 | 3300032091 | Soil | PAVRDFDLSASGDIVRARLTVKTHGFGFGPPGGAGG |
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