Metagenome / Metatranscriptome Family F082277

Basic Information
Family ID	F082277
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	44 residues
Representative Sequence	MLIDGTDPFAAAKPDARLIKLLIRARRFNAALAGSDGVPFAALA
Number of Associated Samples	86
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.05 %
% of genes near scaffold ends (potentially truncated)	90.27 %
% of genes from short scaffolds (< 2000 bps)	86.73 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (87.611 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.327 % of family members)
Environment Ontology (ENVO)	Unclassified (60.177 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.788 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.94% β-sheet: 0.00% Coil/Unstructured: 68.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF07508	Recombinase	5.31
PF11149	DUF2924	5.31
PF13924	Lipocalin_5	2.65
PF13495	Phage_int_SAM_4	1.77
PF03466	LysR_substrate	0.88
PF04185	Phosphoesterase	0.88
PF11994	DUF3489	0.88
PF00171	Aldedh	0.88
PF13531	SBP_bac_11	0.88
PF10282	Lactonase	0.88
PF13358	DDE_3	0.88
PF01547	SBP_bac_1	0.88
PF04909	Amidohydro_2	0.88
PF03806	ABG_transport	0.88
PF01695	IstB_IS21	0.88
PF00248	Aldo_ket_red	0.88
PF13518	HTH_28	0.88
PF05401	NodS	0.88
PF00665	rve	0.88
PF00535	Glycos_transf_2	0.88
PF00892	EamA	0.88
PF13610	DDE_Tnp_IS240	0.88
PF00583	Acetyltransf_1	0.88
PF01979	Amidohydro_1	0.88
PF04392	ABC_sub_bind	0.88
PF00106	adh_short	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	5.31
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.88
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.88
COG1288	Predicted membrane transporter YfcC, affects glyoxylate shunt	General function prediction only [R]	0.88
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.88
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.88
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.88
COG2978	p-Aminobenzoyl-glutamate transporter AbgT	Coenzyme transport and metabolism [H]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.88
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.88
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.88
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.61 %
Unclassified	root	N/A	12.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.61 %
Unclassified	root	N/A	12.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.61 %
Unclassified	root	N/A	12.39 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.65 %
Unclassified	root	N/A	12.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76.11 %
Unclassified	root	N/A	12.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	61.06 %
Unclassified	root	N/A	12.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.31 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.06 %
Unclassified	root	N/A	12.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.31 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.06 %
Unclassified	root	N/A	12.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.31 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.88 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.88 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.06 %
Unclassified	root	N/A	12.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.31 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.88 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.88 %
Azospirillum lipoferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.06 %
Unclassified	root	N/A	12.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.31 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.88 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.88 %
Azospirillum lipoferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_103191210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300005559\|Ga0066700_10233557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1281	Open in IMG/M
3300005610\|Ga0070763_10559926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300005844\|Ga0068862_101320566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300005921\|Ga0070766_10155567	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300005921\|Ga0070766_10329023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300006854\|Ga0075425_102002072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300006954\|Ga0079219_12285616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300010046\|Ga0126384_10548817	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300010047\|Ga0126382_10488057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300010359\|Ga0126376_10398697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1239	Open in IMG/M
3300010361\|Ga0126378_12638955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300010361\|Ga0126378_12999976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300010366\|Ga0126379_10930674	Not Available	972	Open in IMG/M
3300010376\|Ga0126381_101418004	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300010376\|Ga0126381_103634596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300010376\|Ga0126381_104471211	Not Available	540	Open in IMG/M
3300010398\|Ga0126383_10076061	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300012285\|Ga0137370_10537416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300012363\|Ga0137390_10404477	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300012922\|Ga0137394_10734365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300012925\|Ga0137419_11767582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300015241\|Ga0137418_10075544	All Organisms → cellular organisms → Bacteria	3062	Open in IMG/M
3300016270\|Ga0182036_11004488	Not Available	688	Open in IMG/M
3300016270\|Ga0182036_11324278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300016294\|Ga0182041_11224207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300016404\|Ga0182037_10059719	Not Available	2590	Open in IMG/M
3300016404\|Ga0182037_11307754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300016404\|Ga0182037_11722500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M
3300016422\|Ga0182039_11190830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300018468\|Ga0066662_10897122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300020580\|Ga0210403_10047916	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300020580\|Ga0210403_10431509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300020582\|Ga0210395_11274144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300021171\|Ga0210405_11039449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300021180\|Ga0210396_11229958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300021402\|Ga0210385_11516900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300021405\|Ga0210387_11238138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300021405\|Ga0210387_11726932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300021432\|Ga0210384_11329732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300021432\|Ga0210384_11641374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300021479\|Ga0210410_11287295	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300021560\|Ga0126371_11195334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300022726\|Ga0242654_10237421	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300024347\|Ga0179591_1057249	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300025898\|Ga0207692_10831329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	605	Open in IMG/M
3300025906\|Ga0207699_11453112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300025923\|Ga0207681_10475104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum lipoferum	1020	Open in IMG/M
3300026523\|Ga0209808_1135208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	984	Open in IMG/M
3300027071\|Ga0209214_1026851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300027903\|Ga0209488_10912477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300031564\|Ga0318573_10305005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031573\|Ga0310915_10943457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300031640\|Ga0318555_10641955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300031640\|Ga0318555_10708174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031668\|Ga0318542_10600423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300031679\|Ga0318561_10158536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1217	Open in IMG/M
3300031681\|Ga0318572_10614346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300031682\|Ga0318560_10508695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300031718\|Ga0307474_10831277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300031719\|Ga0306917_10913821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300031719\|Ga0306917_11213721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300031719\|Ga0306917_11513036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300031723\|Ga0318493_10382391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300031723\|Ga0318493_10742076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031748\|Ga0318492_10159295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1142	Open in IMG/M
3300031763\|Ga0318537_10262267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300031764\|Ga0318535_10144127	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300031769\|Ga0318526_10374633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300031769\|Ga0318526_10410624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031771\|Ga0318546_11191058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031777\|Ga0318543_10218924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300031793\|Ga0318548_10651187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031797\|Ga0318550_10131812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1194	Open in IMG/M
3300031832\|Ga0318499_10306168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300031833\|Ga0310917_10107307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1804	Open in IMG/M
3300031833\|Ga0310917_10206484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1314	Open in IMG/M
3300031835\|Ga0318517_10095882	Not Available	1298	Open in IMG/M
3300031835\|Ga0318517_10430958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300031835\|Ga0318517_10520454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031845\|Ga0318511_10362928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300031879\|Ga0306919_10476004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	962	Open in IMG/M
3300031890\|Ga0306925_10548102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1226	Open in IMG/M
3300031896\|Ga0318551_10496489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300031897\|Ga0318520_10811071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300031910\|Ga0306923_10181361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2405	Open in IMG/M
3300031910\|Ga0306923_10479169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300031912\|Ga0306921_10139247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2834	Open in IMG/M
3300031941\|Ga0310912_10218932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300031942\|Ga0310916_11246108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300031945\|Ga0310913_10712483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300031946\|Ga0310910_10187111	Not Available	1601	Open in IMG/M
3300031946\|Ga0310910_10398439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300031947\|Ga0310909_11040260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031954\|Ga0306926_10415957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1658	Open in IMG/M
3300031954\|Ga0306926_10954516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1023	Open in IMG/M
3300032001\|Ga0306922_11759699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300032010\|Ga0318569_10084005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1422	Open in IMG/M
3300032044\|Ga0318558_10132357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1190	Open in IMG/M
3300032052\|Ga0318506_10062716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1527	Open in IMG/M
3300032052\|Ga0318506_10410314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300032063\|Ga0318504_10149402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1075	Open in IMG/M
3300032091\|Ga0318577_10283784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300032261\|Ga0306920_100756353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1429	Open in IMG/M
3300032261\|Ga0306920_102488781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.46%
Plants	Host-Associated → Plants	2.65%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.15%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1031912101	3300004092	Bog Forest Soil	MLIDGTDPFAAAKPDARLIKLLIRARRFNAALAGSDGVPFAALA
Ga0066700_102335573	3300005559	Soil	MVIDGSDPFATAKPNARLVKLLLRARRFNAALTQG
Ga0070763_105599261	3300005610	Soil	VRIDGTDPFATAKSDAWLVKLLIKARRFNAALVRSDGVPFAVLAER
Ga0068862_1013205661	3300005844	Switchgrass Rhizosphere	MVIDGTDPLATAKPDARLIKLLLRARRFNTTLTRGEGVAFAALAQQEGVS
Ga0070766_101555671	3300005921	Soil	MVINGTDSFAAKPDARLIKLLLRARRFNATLAQGEGVPFAALADREGV
Ga0070766_103290233	3300005921	Soil	MGIDGTDPFAAKPDPPITLLLRARRFNATLADGEGVPFAALAQRKG*
Ga0075425_1020020721	3300006854	Populus Rhizosphere	MVIDGTDPFATAKPNARLVKLLLRARRFNAALTQGE
Ga0079219_122856162	3300006954	Agricultural Soil	MGIDGTDPFAAKPDPRITLLLRARRFNATLADGEG
Ga0126384_105488173	3300010046	Tropical Forest Soil	MVIDGTDPFAAAQPDMRLIKLLLRARQFNATLAHS
Ga0126382_104880571	3300010047	Tropical Forest Soil	MVIDGTDPFAASKPDARLIKLLLKARRFNATLVGSDEVPF
Ga0126376_103986972	3300010359	Tropical Forest Soil	MVIDGTDPFAASKPDARLIKLLLKARRFNATLVGSDEVPFAALAD
Ga0126378_126389552	3300010361	Tropical Forest Soil	MLIDGTDPFAAARPDARLIKLLLNARRFNATLVGNE
Ga0126378_129999761	3300010361	Tropical Forest Soil	MLIDRTDPFATAKPDARLIKLLIRAHRFNATLAGSGG
Ga0126379_109306744	3300010366	Tropical Forest Soil	IDGTDWFATAKPDARLIKLLIRARRFNAALAGSDGVPFAPWPSKKV*
Ga0126381_1014180041	3300010376	Tropical Forest Soil	MVIDGSDSFARTQPDMRLIKLLLRARRFNATLAHSEGVAFAALAE
Ga0126381_1036345962	3300010376	Tropical Forest Soil	FATAKPDVRLIKLLIRARRFNVALVGNDGVPFAALVKREA*
Ga0126381_1044712112	3300010376	Tropical Forest Soil	MRIDGTDPFATTKPDARLVKLLIRAHRFHAALLNSNGMPYAAMPLGFFG*
Ga0126383_100760615	3300010398	Tropical Forest Soil	MVIDGTDPFAASKPDARLIKLLLKARRFNATLVGSDEVPFAALAEREG
Ga0137370_105374162	3300012285	Vadose Zone Soil	MVIDGTDPFATAKPNARLIKLLLRARRFNAALTQGEGIAF
Ga0137390_104044773	3300012363	Vadose Zone Soil	MVIDGTDPFAAAKPDARLIKLLLRARRFNATLAEGEGVPFAALAQ
Ga0137394_107343651	3300012922	Vadose Zone Soil	MDGTDPFATAKPNARLIKLLLRARRFNAALTQGEGIAFAAL
Ga0137419_117675822	3300012925	Vadose Zone Soil	MVIDGTDPFSTAKPNARLVKLLLRARRFNAALTQGEGIAFA
Ga0137418_100755445	3300015241	Vadose Zone Soil	MEIRMLIDGTDPFAAAKPDARLIKLLVRARRFNATLVQSDGI
Ga0182036_110044883	3300016270	Soil	MMVIDGADPFATAKPDPPLSKLLTRARRFNTTLIGSDGVPFAA
Ga0182036_113242782	3300016270	Soil	MLIEGTDPFATAKPDARLVKLLIRARRFNATLLDSD
Ga0182041_112242071	3300016294	Soil	MVIDGTDSFAASKPDARLIKLLLRARRFNATLVGSDDVPFAAL
Ga0182040_114441531	3300016387	Soil	IGMGIRMLIDGADPFAATKPDARLIKLPIRAGRFDAALIHSDGLPFAALA
Ga0182037_100597195	3300016404	Soil	MLITGTDPFATAKPDARLVKLLIRARRFNATLRDSDGVPFAALA
Ga0182037_102550383	3300016404	Soil	MLIDGADPFAATKPDARLIKLPIRAGRFYAALIHSDGLPFAALA
Ga0182037_113077543	3300016404	Soil	MRIDGTDPFATAKPDARLVKLLIRACQFNAALLDSDGVPFAALAKRH
Ga0182037_117225001	3300016404	Soil	MRIDGTDPFATAKPDARLVKLLIRARRFNATLGDSD
Ga0182039_111908301	3300016422	Soil	LIAGTDAFAAAKPDARLVKLLIRARRFNAILLDSDGVPFAALAKREG
Ga0066662_108971222	3300018468	Grasslands Soil	MRIDATDPFATVKPDARLIKLLIKARRFNAALVRSEGVPFAALAEREGV
Ga0210403_100479168	3300020580	Soil	MEISMRIDGADPFTAVKPDARLIKLLVRAHGFNTTLVQSDGVAFAALALR
Ga0210403_104315092	3300020580	Soil	MVINGKDSFAAKPDARLIKLLLRARRFNATLAQSEGVPFAALAEREGV
Ga0210395_112741442	3300020582	Soil	MVINGTDPLDAAKPDARLIKLLLRARRFHATLAQSEGVPSAALAEREGVSRS
Ga0210405_110394492	3300021171	Soil	MVINGKDSFAAKPDARLIKLLLRARRFNATLAQSEGVPFAA
Ga0210396_112299582	3300021180	Soil	MEINMRIDGADPFTAVKPDARLIKLLVRAHGFNTTLVQSDGSPLRHL
Ga0210385_115169001	3300021402	Soil	MVIYGTDSFAAKPDARLIKLLLRARRFNATLAQGECVPFAVLAEREGVSRS
Ga0210387_112381381	3300021405	Soil	MVINGTDPLDAAKPDARLIKLLLRARRFNATLAQGEGVPFVAL
Ga0210387_117269322	3300021405	Soil	MRIDGTAPFATAKPDAQLIKLLIRAHRFNATLVGG
Ga0210384_113297322	3300021432	Soil	MVINGKDSFAAKPDARLIKLLLRARRFNATLAQSEGVPFAALAERE
Ga0210384_116413742	3300021432	Soil	MVIDGTDPFAAAKSNARLIKLLLRARRFNAALTQGEGIAFAAL
Ga0210410_112872951	3300021479	Soil	MVTNGTDSFVAKPDARLIKLLLRARRFNATLAQGEGVPFAALAEREGVSRSYFTRLV
Ga0126371_111953342	3300021560	Tropical Forest Soil	ARSRCGSTGSARFAAAKPDARLIKLLIRARRFNAVLIDSDAVPFAELPSDNV
Ga0242654_102374211	3300022726	Soil	LRIDRTDPFATAKPDARLIKLLVRARRFNTALVGSDGVPFVALA
Ga0179591_10572493	3300024347	Vadose Zone Soil	VIDGTDPFVAAKPDGRLIKLLVRARRFNATLVHSDGVPVAALAKA
Ga0207692_108313292	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLIDGTDPFATAKPDARLVKLLIRARRFNATLLDS
Ga0207699_114531121	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MVINGNDPFGTTKPDARLVNLLIKARRFNAALLNSDGVP
Ga0207681_104751043	3300025923	Switchgrass Rhizosphere	MVIDGTDPFAASKPDARLIKLLLKARRFNATLVGS
Ga0209808_11352082	3300026523	Soil	MRIEGTGPFATAKPDARLVKLLIRARRFNATLLDSD
Ga0209214_10268512	3300027071	Forest Soil	MVINGTDSFAAKPDARLIKLLLRARRFNATLAQGEGVPFAAL
Ga0209488_109124772	3300027903	Vadose Zone Soil	MVIDSTDPFAAAKPDARLIKLLLRARRFNATLAEGEG
Ga0318573_103050051	3300031564	Soil	MRIEGTDPFARAKPDARLVKLLIKARRFNATLLDSDGVPF
Ga0310915_103055482	3300031573	Soil	MLIDGADPFAATKPDARLIKLPIRAGRFDAALIHGDGLPFAALAQREG
Ga0310915_108173691	3300031573	Soil	RRIGMGIRMLIDGADPFAATKPDARLIKLPIRAGRFDAALIHSDGLPFAALA
Ga0310915_109434571	3300031573	Soil	MLVGTDPFATTKPDRRLIKLLIRAHRFNAALASSDGVPF
Ga0318555_106419551	3300031640	Soil	TDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318555_107081741	3300031640	Soil	MRIDGTDPFATAKPAARLIKLLIRAHRFNTTLVDGGSMPF
Ga0318542_106004231	3300031668	Soil	TMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318561_101585362	3300031679	Soil	MLIEGTDPFATAKPDARLVKLLIRARRFNATLLDSDGVPFAAL
Ga0318574_102495041	3300031680	Soil	FATAKPDARLIKLLIRARRFNATLLDSDGVPFAALA
Ga0318572_106143462	3300031681	Soil	MRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318560_105086951	3300031682	Soil	MLITGTDPFATAKPDARLVKLLIRAHRLNATLLDSDGVPFAALAKR
Ga0318560_106027471	3300031682	Soil	MIIDGADPFAATKPDARLIKLPIRAGRFDAALIHGDGLPFAALAQREGV
Ga0307474_108312771	3300031718	Hardwood Forest Soil	MVINGTGSFAAQPDARLIKLLLKARRFNATLADSEGVPFAALAEREGVSRSYFTRLVR
Ga0306917_109138211	3300031719	Soil	EPIRLRRTGREITMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0306917_112137212	3300031719	Soil	MLIAGTDPFATAKPDARLVKLLIRARQFNATLVGGDGVPFAA
Ga0306917_115130362	3300031719	Soil	MRIDGTDPFATAKPDARLIKLLIRAHRFNTTLVDGGS
Ga0318493_103823911	3300031723	Soil	DPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318493_107420762	3300031723	Soil	MLVGTDPFATAKPDRRLIKLLIRARRFNAALAGSDGVP
Ga0318500_106077921	3300031724	Soil	MGIRMLIDGADPFAATKPDARLIKLPIRAGRFYAALI
Ga0318502_109941571	3300031747	Soil	MLIDGADPFAATKPDARLIKLPIRAGRFDAALIHSDGLPFA
Ga0318492_101592953	3300031748	Soil	MRIDGADPFATAKPDARLIKLLIRARRFNAALVCSDGVPFAALAK
Ga0318537_102622671	3300031763	Soil	GREITMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318535_101441272	3300031764	Soil	ARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318526_103746331	3300031769	Soil	MRIDGADPFATAKPDARLIKRLIRARRFNAALVCSDGVPFAALAKQEGVSPSY
Ga0318526_104106242	3300031769	Soil	MLERPDPFATAKPDMRLIKLLIRARRFNAALAGSDGVMFAALARRE
Ga0318546_111910581	3300031771	Soil	PFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318543_102189241	3300031777	Soil	IRLRRTGREITMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAG
Ga0318548_106511871	3300031793	Soil	MLIEGPDPFATAKPDARLIKLQIRARRFNAALVDSDGM
Ga0318550_101318121	3300031797	Soil	FATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318499_103061681	3300031832	Soil	MLIAGTDPFATAKPDARLVKQLIKARRFNTTLLESDSVPFAAL
Ga0310917_101073073	3300031833	Soil	MRIDGTDPFATAKPDARLVKLLIRARRFNATLLDSDG
Ga0310917_102064841	3300031833	Soil	TGREITMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318517_100958825	3300031835	Soil	MRIDGADPFATAKPDARLIKRLIRARRFNAALVCSDGVPFAA
Ga0318517_104309581	3300031835	Soil	MRIDSTDPFATAKPDARLIKLLIRARRFNAALLDGDGMPFAALAKRE
Ga0318517_105204542	3300031835	Soil	MLIEGPDPFATAKPDARLIKLQIRARRFNAALVDSDGMPFVALVK
Ga0318511_103629281	3300031845	Soil	MRIDSTDPFATAKPDARLIKLLIRARRFNAALLDGDGMPFAALAKQE
Ga0306919_104760043	3300031879	Soil	MLERPDPFATAKPDMRLIKLLIRARRFNAALAGSDG
Ga0306925_105481023	3300031890	Soil	MLIDGTDPFATAKPDARLVKLLIRARRFNATLVDSDGVPFA
Ga0318551_104964891	3300031896	Soil	DGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318520_108110711	3300031897	Soil	MRIDGTDPFATAKPDARLIKLLIRAHRFNTTLVDGGSVPFAALAKR
Ga0306923_101813611	3300031910	Soil	MLIEGTDPFATAKPDARLVKLLIRARRFNATLLDSDGVPFA
Ga0306923_104791693	3300031910	Soil	MRIDDTSPFATAKPDARLIKLLIRARRFNTALVSSD
Ga0306921_101392474	3300031912	Soil	MRIDGTDPFATAKPDARLIKLLIRARRFNATLLDSDG
Ga0310912_102189321	3300031941	Soil	MLIDRADPFSTAKPDARLIKLLIRAHRFNATLAGSGGTPFA
Ga0310916_112461082	3300031942	Soil	MVIDGTDPFATAKPNARLIKLLLRARRFNTALTQGEGIAF
Ga0310913_107124831	3300031945	Soil	RTGREITMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0310910_101871112	3300031946	Soil	MLVGTDPFATTKPDRRLIKLLIRAHRFNAALASSDGVPFAALAK
Ga0310910_103984391	3300031946	Soil	MLIEGPDPFATAKPDARLIKLLIRARRFNTTLATAMAWRL
Ga0310909_110402601	3300031947	Soil	LIAGTNPFATAKPDARLVKLLIKARRFNAALVGRD
Ga0306926_104159573	3300031954	Soil	MLIDRADPFSTAKPDARLIKLLIRAHRFNATLAGSG
Ga0306926_109545163	3300031954	Soil	MLIAGTDPFATAKPDARLVKLLIRARQFNATLLGSDGVPFAALAK
Ga0306922_117596991	3300032001	Soil	RLRRTGREITMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0318569_100840052	3300032010	Soil	MRIDGTDPFATAKPDARLVKLLIRARRFNAALVGSDGVPFAA
Ga0318558_101323572	3300032044	Soil	MLIAGTDPFATAKPDARLVKLLIKARRFNTTLLESDSVPFA
Ga0318506_100627161	3300032052	Soil	MRIDGADPFATAKPDARLIKRLIRARRFNAALVCSDGVPFAALAK
Ga0318506_104103141	3300032052	Soil	MLIAGTDPFATAKPDARLVKLLIKARRFNATLLDS
Ga0318504_101494021	3300032063	Soil	MRIDGADPFATAKPDARLIKLLIRARRFNAALVCSDGVPFAALAKQ
Ga0318577_102837841	3300032091	Soil	REITMRIDGTDPFATAKPDARLIKLLIRARRFNAALVGSDGVPFAALAELRAGL
Ga0306920_1007563531	3300032261	Soil	MAAHARRSLRRAGREITMRIDGTDPFATAKPDTRLTKLLIRARRFNATLEGGDGVPFAALAKREER
Ga0306920_1024887811	3300032261	Soil	MRIDGTDPFATAKPAARLIKLLIRAHRFNTTLVDGGSMP

Hidden Markov Model


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