Metagenome / Metatranscriptome Family F082240

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082240
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	67 residues
Representative Sequence	VQGLLLDCDAATLTVWVNGERKGVMVRPGMTNNRGEPVGRLEGPLRWAVDVVDASVAIAGPLPPPA
Number of Associated Samples	27
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.11 %
% of genes near scaffold ends (potentially truncated)	37.17 %
% of genes from short scaffolds (< 2000 bps)	85.84 %
Associated GOLD sequencing projects	26
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (95.575 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater (30.973 % of family members)
Environment Ontology (ENVO)	Unclassified (53.097 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (56.637 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130 1GOS2216_100977492 2GOS2216_101143053 3Ga0066841_100370872 4Ga0066379_101155302 5Ga0066372_103926802 6Ga0066366_104044421 7Ga0105020_12860551 8Ga0115663_10780411 9Ga0118716_12694211 10Ga0115013_103384842 11Ga0115011_108520022 12Ga0115011_113376181 13Ga0115011_113901251 14Ga0115011_116818481 15Ga0115011_118042671 16Ga0115011_118287931 17Ga0115011_122954631 18Ga0115012_104205292 19Ga0115012_110893782 20Ga0115012_111315821 21Ga0115012_115017131 22Ga0115012_117757611 23Ga0115012_119600412 24Ga0163110_114581571 25Ga0163108_110200111 26Ga0163180_101519783 27Ga0163180_103525141 28Ga0163180_105627661 29Ga0163180_106002273 30Ga0163180_108220861 31Ga0163180_109180161 32Ga0163180_109979661 33Ga0163180_110523661 34Ga0163180_111231793 35Ga0163180_112372052 36Ga0163180_112524041 37Ga0163180_113476081 38Ga0163180_113798663 39Ga0163180_114365722 40Ga0163180_115678872 41Ga0163180_116921662 42Ga0163179_102039962 43Ga0163179_102135932 44Ga0163179_102142572 45Ga0163179_102473512 46Ga0163179_103720222 47Ga0163179_106619081 48Ga0163179_108170072 49Ga0163179_108941901 50Ga0163179_110323042 51Ga0163179_111539852 52Ga0163179_113277431 53Ga0163179_113866301 54Ga0163179_114544882 55Ga0163179_115067082 56Ga0163179_117578451 57Ga0163179_118426431 58Ga0163179_119736602 59Ga0163179_120331441 60Ga0163179_120639851 61Ga0193025_10029651 62Ga0193025_10089501 63Ga0211590_102651032 64Ga0209404_110628411 65Ga0315328_105002471 66Ga0315331_105932712 67Ga0315331_108558981 68Ga0315331_109902862 69Ga0315331_110956041 70Ga0315318_107304961 71Ga0310344_100870615 72Ga0310344_101342293 73Ga0310344_102327474 74Ga0310344_103324692 75Ga0310344_103344262 76Ga0310344_105834641 77Ga0310344_106313081 78Ga0310344_106404311 79Ga0310344_108954803 80Ga0310344_110694102 81Ga0310344_110734091 82Ga0310344_110900432 83Ga0310344_111353841 84Ga0310344_112422892 85Ga0310344_112425722 86Ga0310344_113016332 87Ga0310344_114058461 88Ga0310344_114497301 89Ga0310344_114915801 90Ga0310344_115335431 91Ga0310344_116462201 92Ga0315316_107995971 93Ga0315315_106186551 94Ga0315315_114097921 95Ga0315315_115507051 96Ga0315315_115660682 97Ga0315315_117315111 98Ga0315315_118454011 99Ga0315321_104084691 100Ga0310345_107184131 101Ga0310345_118081691 102Ga0310345_119899902 103Ga0310345_121425851 104Ga0310345_121455942 105Ga0310345_123339221 106Ga0310342_1007778011 107Ga0310342_1012734182 108Ga0310342_1020194623 109Ga0310342_1023300341 110Ga0310342_1026389961 111Ga0310342_1033823321 112Ga0310342_1035615281 113Ga0310342_1037270561
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130 1GOS2216_100977492 2GOS2216_101143053 3Ga0066841_100370872 4Ga0066366_104044421 5Ga0115663_10780411 6Ga0115013_103384842 7Ga0115011_108520022 8Ga0115011_113376181 9Ga0115011_113901251 10Ga0115011_118042671 11Ga0115012_110893782 12Ga0115012_111315821 13Ga0115012_115017131 14Ga0115012_117757611 15Ga0115012_119600412 16Ga0163180_103525141 17Ga0163180_105627661 18Ga0163180_108220861 19Ga0163180_109180161 20Ga0163180_109979661 21Ga0163180_110523661 22Ga0163180_114365722 23Ga0163179_102135932 24Ga0163179_102142572 25Ga0163179_102473512 26Ga0163179_103720222 27Ga0163179_108170072 28Ga0163179_108941901 29Ga0163179_110323042 30Ga0163179_113277431 31Ga0163179_117578451 32Ga0163179_119736602 33Ga0163179_120331441 34Ga0315331_110956041 35Ga0310344_101342293 36Ga0310344_102327474 37Ga0310344_103324692 38Ga0310344_103344262 39Ga0310344_106313081 40Ga0310344_106404311 41Ga0310344_108954803 42Ga0310344_110694102 43Ga0310344_110734091 44Ga0310344_111353841 45Ga0310344_112425722 46Ga0310344_113016332 47Ga0310344_114497301 48Ga0310344_115335431 49Ga0310344_116462201 50Ga0315316_107995971 51Ga0315315_114097921 52Ga0315315_115507051 53Ga0315315_115660682 54Ga0310345_119899902 55Ga0310345_121455942 56Ga0310342_1012734182 57Ga0310342_1020194623 58Ga0310342_1023300341 59Ga0310342_1026389961 60Ga0310342_1033823321 61Ga0310342_1035615281 62Ga0310342_1037270561
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 1Ga0315331_109902862 2GOS2216_100977492 3GOS2216_101143053 4Ga0066372_103926802 5Ga0066366_104044421 6Ga0115663_10780411 7Ga0115013_103384842 8Ga0115011_108520022 9Ga0115011_113376181 10Ga0115011_113901251 11Ga0115011_118042671 12Ga0115011_118287931 13Ga0115011_122954631 14Ga0115012_110893782 15Ga0115012_111315821 16Ga0115012_119600412 17Ga0163110_114581571 18Ga0163108_110200111 19Ga0163180_101519783 20Ga0163180_103525141 21Ga0163180_105627661 22Ga0163180_106002273 23Ga0163180_108220861 24Ga0163180_109180161 25Ga0163180_109979661 26Ga0163180_110523661 27Ga0163180_111231793 28Ga0163180_112372052 29Ga0163180_113476081 30Ga0163180_113798663 31Ga0163180_114365722 32Ga0163180_115678872 33Ga0163180_116921662 34Ga0163179_102142572 35Ga0163179_102473512 36Ga0163179_106619081 37Ga0163179_108170072 38Ga0163179_108941901 39Ga0163179_110323042 40Ga0163179_111539852 41Ga0163179_113866301 42Ga0163179_114544882 43Ga0163179_117578451 44Ga0163179_118426431 45Ga0163179_119736602 46Ga0163179_120331441 47Ga0163179_120639851 48Ga0211590_102651032 49Ga0209404_110628411 50Ga0315331_108558981 51Ga0315331_110956041 52Ga0310344_101342293 53Ga0310344_102327474 54Ga0310344_103324692 55Ga0310344_103344262 56Ga0310344_105834641 57Ga0310344_106313081 58Ga0310344_106404311 59Ga0310344_108954803 60Ga0310344_110694102 61Ga0310344_110900432 62Ga0310344_111353841 63Ga0310344_112422892 64Ga0310344_112425722 65Ga0310344_113016332 66Ga0310344_114058461 67Ga0310344_114497301 68Ga0310344_114915801 69Ga0310344_115335431 70Ga0310344_116462201 71Ga0315316_107995971 72Ga0315315_114097921 73Ga0315315_115507051 74Ga0315315_115660682 75Ga0315315_117315111 76Ga0315315_118454011 77Ga0310345_118081691 78Ga0310345_119899902 79Ga0310345_121425851 80Ga0310345_121455942 81Ga0310345_123339221 82Ga0310342_1012734182 83Ga0310342_1023300341 84Ga0310342_1033823321 85Ga0310342_1035615281 86Ga0310342_1037270561
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.02% Coil/Unstructured: 82.98%
Feature Viewer
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF12796	Ank_2	1.77
PF13639	zf-RING_2	0.88
PF00481	PP2C	0.88
PF13088	BNR_2	0.88
PF00645	zf-PARP	0.88
PF00153	Mito_carr	0.88
PF03028	Dynein_heavy	0.88
PF03798	TRAM_LAG1_CLN8	0.88
PF02668	TauD	0.88

Showing 1 to 9 of 9 entries

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COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0631	Serine/threonine protein phosphatase PrpC	Signal transduction mechanisms [T]	0.88
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	4.42 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	4.42 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.77 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.65 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %
Unclassified	root	N/A	95.58 %

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %
Unclassified	root	N/A	95.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.88 %
Unclassified	root	N/A	95.58 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001972\|GOS2216_10097749	All Organisms → cellular organisms → Eukaryota	1838	Open in IMG/M
3300001972\|GOS2216_10114305	Not Available	1528	Open in IMG/M
3300005599\|Ga0066841_10037087	Not Available	776	Open in IMG/M
3300005951\|Ga0066379_10115530	Not Available	844	Open in IMG/M
3300006902\|Ga0066372_10392680	Not Available	800	Open in IMG/M
3300007283\|Ga0066366_10404442	Not Available	594	Open in IMG/M
3300007514\|Ga0105020_1286055	Not Available	1070	Open in IMG/M
3300008740\|Ga0115663_1078041	Not Available	992	Open in IMG/M
3300009370\|Ga0118716_1269421	Not Available	701	Open in IMG/M
3300009550\|Ga0115013_10338484	Not Available	942	Open in IMG/M

Showing 1 to 10 of 99 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.39%
Oceanic	Environmental → Aquatic → Marine → Oceanic	82.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.65%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.77%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	80.53%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.65%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.58%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.65%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.65%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	30.97%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	30.97%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	12.39%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.89%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.89%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001972	Marine microbial communities from the Sargasso Sea - GS000d	Environmental	Open in IMG/M
3300005599	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91A	Environmental	Open in IMG/M
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300008740	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M

Showing 1 to 10 of 27 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2216_100977492	3300001972	Marine	VQGLLLDLDAATLTVWVNGERKGVMARPGMTNVDADPVGRLEGPLRWAVDVIESSAAIAGPLPLPE*
GOS2216_101143053	3300001972	Marine	MLLDLDAATLTVWVNGERKGVMAHPGMTDDDGALVGRLEGPLRWAADLCAASVAIEGPLPPPA*
Ga0066841_100370872	3300005599	Marine	VAQGLLLDLDAATMTVWVNGERKGVMVRPGMTVDSEDDSHGEPVARLDGPLRWAVEMASTSTRPWSVTIGGPLPPPA*
Ga0066379_101155302	3300005951	Marine	MTVWVNGERKGVMVRPGMTVDSEDDSHGEPVARLDGPLRWAVEMASTSTRPWSVTIGGPLPPPA*
Ga0066372_103926802	3300006902	Marine	VAQGLLLDLDAATLTVWVNGQRKGVMVRPGMTDSHGQPVGRLEGPLRWAVDLWGGSSVAIAGPLPLPD*
Ga0066366_104044421	3300007283	Marine	VLQGLLLDLDAAIVTVWVNGVRKGVMVRPGMTDVDGEPVGRLEGPLRWAVALGPNASVEIAGALSPPA*
Ga0105020_12860551	3300007514	Marine	VAQGLLLDLDAATMTVWVNGERKGVMVRPGMTVDSEDDSHGEPVARLDGPLRWAVEMASTSTRPWSVTIGGPLPPPT*
Ga0115663_10780411	3300008740	Marine	MLLDVDAATLTVSVNGVPQGVMVRPGMTMSSDGDPVHRLEGSLYWTVRLSAGASVAIGGGGLII*
Ga0118716_12694211	3300009370	Marine	MRVSQGLLLDLDAATVWVNGVRKGVMVRPSMTDVDGEPVGRLEGPLRWAVALGPNASVEIAGALSPPA*
Ga0115013_103384842	3300009550	Marine	VVQGLLLDLDAATLTVWVNGERKGVMARPGMTDEEQPVPRLEGPLRWAAVDLEGVVKIDGPLPPPEDP*
Ga0115011_108520022	3300009593	Marine	LQGLLLDLDAATLMVWVNGERKGVMVRPSTTNSDGQPVGRLEGPLRWAVDMDGGVKVDGPLPLPEDE*
Ga0115011_113376181	3300009593	Marine	DCDAATLTVWVNGERKGVMVRPGMTCDWAAAGQEYEPVGRLEGPLRWATDLYVAPNASVAISGPLPPPPAAV*
Ga0115011_113901251	3300009593	Marine	VCAVQGLLLDCDVATLTVYVNGERKGVMVRPGMTDNDGEPVARLVGPLRWAVELGYHSSVAIGGPLPPPDCATPEATQ*
Ga0115011_116818481	3300009593	Marine	MRVSQGLLLDLDAATLTVWVNGERKGVMVRPGMTDVDGEPVGRLEGPLRWAVALGPNASVEIAGALS
Ga0115011_118042671	3300009593	Marine	SSLPAPVPCSRWLCVLQGLLLDLDAATLTVWVNGERKGVMARPGMTNNAGQPVGRLEGPLRWAVDLRYAASVAIAGSSPPPA*
Ga0115011_118287931	3300009593	Marine	VGSQGLLLDCDAATLTVWVNGERKGVMARPGMTDVGGQPVGRPEGPLRWAVDLDNSSVAIAGPLPPPAA*
Ga0115011_122954631	3300009593	Marine	VLLTTRAVQGLLLDLDAATLTVWVNGERKGVMARPGMTNVDGEPVGRLEGPLRWVVDLYGPASVAIAGPLPPPT*
Ga0115012_104205292	3300009790	Marine	MRVSQGLLLDLDAATVWVNGVRKGVMVRPSMTDVDGEPVGRLEGPLRWAVALGPNALVEIAGALSPPA*
Ga0115012_110893782	3300009790	Marine	MLLDCDAATLTVWVNGERKGVMVQPGMTNDRGDVRRLVGPLRWVVDLTGGASVEIDWGTLPPD
Ga0115012_111315821	3300009790	Marine	VQGLLLDLDAATLTVWVNGERKGVMVRPGMTNVYGQPVARLEGPLRWAVDLRSSTVAIAGPLPPPLGATAAAAAQ*
Ga0115012_115017131	3300009790	Marine	ERKGIMARPGMTDSSGRLVGRLEGPLRWAVDLRASTSVAIAGPLPLPV*
Ga0115012_117757611	3300009790	Marine	NAERKGAMARPGMTNVDGIAVGRIEGPLCWAIDLADASVAIAGPLPLPPS*
Ga0115012_119600412	3300009790	Marine	VQGLLLDLDAATLTVWVNGARKGVVARPGMTYDFPDEDHHGEPVPRLEGPLCWAVVLSETSVAIDADPSSLPG*
Ga0163110_114581571	3300012928	Surface Seawater	VQGLLLDLDVATLTVWVNGERKGVMVRPGMTDKDGQPVARLEGPLRWAVDLFQAEVAIAGPLPPPA*
Ga0163108_110200111	3300012950	Seawater	VQGLLLDCDAATLTVWVNGERRGVMVRPGMIIRGEPVGRLEGPLRWAVDVGNSSSAAIAGPLPPPE*
Ga0163180_101519783	3300012952	Seawater	MQGLLLDLDAATLTVWGNGERKGVMARPGMTDNSGEPVARLEGPLRWAVDLRSSTSVAIDGPLPLPTA*
Ga0163180_103525141	3300012952	Seawater	MVLDCDAATLTVWVNGERKGVMVRPAMTDADGQPVGRPVGRLEGPVRWVVDLYDASVAVAGPLPPPS*
Ga0163180_105627661	3300012952	Seawater	TLTVWVNGERKGVMVRPGMTDEHGAPVGRLEGPLRWTVDLEGSSVGIAGPLPPPEGATLAAAAQQ*
Ga0163180_106002273	3300012952	Seawater	VAQGLLLDCDAATLTVWVNGERKGVMARPGMTNVRGEPVGRLEGPLRWAVDVGLSSSVAIAGPLPPPE*
Ga0163180_108220861	3300012952	Seawater	SPPPVTAPPLTVPAQGLLLDLDAATLTVWVNGQRKGVMLRPGMTDDYAEPVSRLEGPLRWAVDLYDDSVAIAGPLPPPS*
Ga0163180_109180161	3300012952	Seawater	MLLDLDVATLTVNGEQKGVMVRYADGGPVARLEGPLRWAVGLADTSVAIAGPLPSEPRRNMCLCLGG*
Ga0163180_109979661	3300012952	Seawater	PSALFVALLTLLCVVQGLLLDLDAATLTVWVNGERKGVMVRPGMTDIHGDPVARLEGPLRWAVDVSHGASVAIAGPLPPPA*
Ga0163180_110523661	3300012952	Seawater	MRVVQGLLLDLDAATVTVWVNGERTGVMARPGMTDRHGQPVGRLEGPLRWAVDLGNAPVAVAGPLPPPTSPSNQ*
Ga0163180_111231793	3300012952	Seawater	LDLDAATLTVWVNGERKGVMARPGMTDQDGQPVPRLEGPLRWAVDLNRASVAIAGPLQPPE*
Ga0163180_112372052	3300012952	Seawater	MLLDLDAATLTVWVNGVRKGVMVRPGMTNRTFGEPVGRLEGPLRWAVDLEMASVAINGPLPTPADA*
Ga0163180_112524041	3300012952	Seawater	GLLLDLDAATLTVWVNGERKGVMVRPGMADNDGQPVGRLEGPLRWAVDLCGASVAIAGPLPPPAAA*
Ga0163180_113476081	3300012952	Seawater	VAQGLLLDLDAATMTVWVNGERKGVMVRPGMAVDSEDDSHGEPVARLDGPLRWAVEMASTSTRPWSVTIGGPLPPPA*
Ga0163180_113798663	3300012952	Seawater	MLLDIDAATLTVYVNGERKGVMVQPGMTDRSGRPVARLEGPLRWAVDLGRSSVAIEGPLPPPE*
Ga0163180_114365722	3300012952	Seawater	LDCDAATLTVWVNGERKGVMVRPGLGSEDGQVMARLEGPLRWAITMIGACVAIAGPLPLPA*
Ga0163180_115678872	3300012952	Seawater	VYVNAERKGAMARPGMTNVDGIAVGRIEGPLCWAIDLADASVAIAGPLPLPPS*
Ga0163180_116921662	3300012952	Seawater	VQGLLLDLDAATLTVWVNGERKGGVMARPGMTDSGGQPVGRLEGPLRWAVDLFDDASVTIAGPLPPPA*
Ga0163179_102039962	3300012953	Seawater	MLLDCDAATLTVYVNGERKGVMVQPGMTNDRGDVRRLVGPLRWVVDLTGGASVEIDWGTLPPDA*
Ga0163179_102135932	3300012953	Seawater	MRLTLVCAAQGLLLDLDAATLTVWVNGERKGVMVRPGMTNLDGEPVARLEGPLRWAVDMDGEVKIDGPLPPPTV*
Ga0163179_102142572	3300012953	Seawater	VWVNGARKSVMVRPGMTSQYGGQPVGRLEGPLRWAVDVWSASVAIAGPLPLPA*
Ga0163179_102473512	3300012953	Seawater	AAAPLVTRGCGSLLVVAQGMLLDCDAATLTVWVNGERTGVMARPGMTDFEGQPVGRLEGPLRWAVDLAGSDVAIEGPLPPPA*
Ga0163179_103720222	3300012953	Seawater	ARPGMTNDEDHELVGRLEGPLRWAVDLSRASVAIAGPLPPPESATQP*
Ga0163179_106619081	3300012953	Seawater	MLLNLDAATLTVWVNGERKGVMVRPGMTNVDGEPVARLEGPLRWAVDVATSSVAIAGPLPLPTA*
Ga0163179_108170072	3300012953	Seawater	DCDAATLTVWVNGERKGVMVRPGMTDDTGNSVGRLEGPLRWAVSMSEANITIQGPLPPPS
Ga0163179_108941901	3300012953	Seawater	VWVNGERKGVMARPGMANWHGEPVGRLEGPLRWAVDLGRSTSVAITGPLPPPA*
Ga0163179_110323042	3300012953	Seawater	VWVNGEWKGVMVRPGMTSNSGHEVARLEGPLRWAVDMDAGTSVAIAGPLPPP*
Ga0163179_111539852	3300012953	Seawater	VSLPELTLLCGLQGLLLDCDAATLTVWVNGERKGVMVRPGMTNMRGEPVARLEGPLRWAVDLSQASVAITGPLPPPS*
Ga0163179_113277431	3300012953	Seawater	KGVMARPGMTDDEDGLPVPRLEGPLRWAVDLYEASVAIAGPLPPPE*
Ga0163179_113866301	3300012953	Seawater	TLTVWVNGERKGVMARPGMTNRGGQPVGRLQGPLRWAVDVQWASVAITGPLPPPE*
Ga0163179_114544882	3300012953	Seawater	VVQGLLLDLDAATLTVWVNGERKGVMARPGMTNDQGLPVARLEGPLRWAVDLSAASVAIAGPLPPPS*
Ga0163179_115067082	3300012953	Seawater	VQGLLLDCDAATLTVWVNGERKGVMARPGMTNVYGEPVGRLEGPLRWAVDLYASSVAIAGPLPPP*
Ga0163179_117578451	3300012953	Seawater	SHCWVSQGLLLDLDAATLTVWVNGERKGVMVRPGMTLDDGAGPVARLEGPLRWSVDLRHVSVSIEGPLPPPA*
Ga0163179_118426431	3300012953	Seawater	MTVWVNGERKGVMARPGMTNNYGQPVGRLEGPLRWAVDLYGASVGIAGPLPPPAAA*
Ga0163179_119736602	3300012953	Seawater	LAQGLLLNLDAATLTVWVNGERKGVMARSGMTDDGWGQPVGRLEGPLRWAADLCYGSSVAIGGP
Ga0163179_120331441	3300012953	Seawater	VTVWLNGERKGGMALPGMANRHGGPVARLEGPLRWVVDLFCGVSVAIGGPSPPPA*
Ga0163179_120639851	3300012953	Seawater	TVWINGERKGVMARPGMTAINGQPVGRLEGPLRWAVDLSGASVAIGGPLPPPA*
Ga0193025_10029651	3300018606	Marine	VAQGLLLDLDAATMTVWVNGERKGVMVRPGMTVDSEDDSHGEPVARLDGPLRWAVEMASTSTRPWSVTIGGPLPPPA
Ga0193025_10089501	3300018606	Marine	MRVSQGLLLDLDAATVWVNGVRKGVMVRPSMTDVDGEPVGRLEGPLRWAVALGPNASVEIAGALSPPA
Ga0211590_102651032	3300020387	Marine	LDCDAATLTVWVNGERKGVMVRPGMIDRGGRPVGRLEGPLRWAVDLSATSVAIAGPLPPP
Ga0209404_110628411	3300027906	Marine	VQGLLLDLDAATLTVWVNGERKGVMARPGMTDEDGDAVGRLEGPLRWAVDLYGGASVAIAGPLPPPRFHLGAA
Ga0315328_105002471	3300031757	Seawater	MRVSQGLLLDLDAATVWVNGVRKGVMVRPSMTDVDGEPVGRLEGPLRWAVALGPNASVEIAGALSPPT
Ga0315331_105932712	3300031774	Seawater	RVVQGLLLDLDAATLTVWVNGERKGVMARPGMVDEHGEPVARLEGPLRWAVDLNGASVAIAGPLPPPAAA
Ga0315331_108558981	3300031774	Seawater	TVWVNGERKGVMARPGMTNSAGEPVGRLEGSLLRWAVDLHDSSVAIEGPLPLPA
Ga0315331_109902862	3300031774	Seawater	VQGLLLDCDAATLTVWVNGERKGVMVRPGMTNNRGEPVGRLEGPLRWAVDVVDASVAIAGPLPPPA
Ga0315331_110956041	3300031774	Seawater	LRPLPSSPRGLTLPVPQGLLLDLDAATLTVWVNGERKGVMVRPGMARNDGEPVARLEGPLRWVVDLCDASVAIAGPLPPPT
Ga0315318_107304961	3300031886	Seawater	MRVSQGLPLDLDAATVWVNGVRKGVMVRPGMTDVDGEPVGRLEGPLRWAVALGPNASVEIAGALSPPA
Ga0310344_100870615	3300032006	Seawater	VAQGLLLDLDAATMTVWVNGERKGVMVRPGMTVDSEDDSHGEPVARLDGPLRWAVEMASTSTRPWSVTIGGPLPPP
Ga0310344_101342293	3300032006	Seawater	VVQGLLLDLDAATLTVWVNGERKGVMARPGITTNNGQLVGRLEGPLRWAVDLFGDASVAVAGPLPPPSCAM
Ga0310344_102327474	3300032006	Seawater	MVLDCDAATLTVWVNGERKGVMARPDMTYENPEKGYHGEPVSRLEGPLRWAVDLNGASVVIEGSLPPPPE
Ga0310344_103324692	3300032006	Seawater	MLLDLDAATLTVYVNGERKGVMVQPGMTNDKRDVGRLEGPLRWAVDLSGGAS
Ga0310344_103344262	3300032006	Seawater	MLLDLDVATLTVWVNGELEGVMVRPGMTRYNAQRDSDQPLPRLEGPLRWAADLNGAVEIAHGQPPAGS
Ga0310344_105834641	3300032006	Seawater	MRLTLVCAAQGLLLDLDAATLTVWVNGERKGVMVRPGMTNLDGEPVARLEGPLRWAVDLDGELKIDGPLPPPNV
Ga0310344_106313081	3300032006	Seawater	MLVQGLLLDLDAATLEVWVNGQRKGVMVQPGLTDQAGQPVDRLEGPLLWMVELGLGTPVAIGGPLPPPS
Ga0310344_106404311	3300032006	Seawater	VPLVQGLLLDLDAATLTVYVNGERKGVMVHPSMTDHLGDSVGRLEGPLRWAVDVHAGVSVAVAGPLSPPS
Ga0310344_108954803	3300032006	Seawater	AATCAVQGLLLDCDAATLTVWVNGERKGVMVRPGMTDELGEPVGRLEGPLRWALDLALLSSVAIAGPLPPPA
Ga0310344_110694102	3300032006	Seawater	VAAPAPLAPCGSLLSAVCVAQGLLLDLDAATLTVWVNGERKGVMAHPGMTDRQGEPVARLEGPLRWAVDLEHSSMAIDGPLPPPA
Ga0310344_110734091	3300032006	Seawater	NGERKGAMVRPGMTNTDGQPVGRLEGPLRWAADLLDASVAIAGPSPPPA
Ga0310344_110900432	3300032006	Seawater	MCAMQGLLLDCDAATLTVWVNGERKGVATRPGMTNNLGRRVGRLEGPLRWAADVNGASVAIAGPLPSPA
Ga0310344_111353841	3300032006	Seawater	LLLDLDAATLTVYVNGERKGVMVRPGMSCLSEHEELQPVARLEGPLRWAVDMYRSSVAITGPLPLPA
Ga0310344_112422892	3300032006	Seawater	VYINGERKGVMARPGMTLGNGKPVGRLEGPLRWAVDLSDTSVAIAGPLPLPA
Ga0310344_112425722	3300032006	Seawater	RGAGSAARLRRGTLTVWVNGERKGVMVRPGMLDRSYTEVGRLEGPLRWAVDLDNSSVAVAGPLPPPAA
Ga0310344_113016332	3300032006	Seawater	ATLSVRVNGERKGVMARPGMTDDQGDPVGRLEGPLRWAVDLAMGDSVAVGGPLPPPA
Ga0310344_114058461	3300032006	Seawater	VQGLLLDCDAATLTVWVNGERKGVMARPGMTNRDGEPVGRLEGPLRWAVDLSNGASVAIAGPLPLPAV
Ga0310344_114497301	3300032006	Seawater	DCDAATLTVWVNGERKGVMVRPGTTDELGEPVPRLEGPLRWAVDLYNTSVVIAGPLPLPE
Ga0310344_114915801	3300032006	Seawater	GLLLDLDAATLTVWVDGERKGVMARPGMTDREGEPVGRLEGPLRWAVDVYCEASVAIDGALPPPA
Ga0310344_115335431	3300032006	Seawater	VPLTLCVVQGLLLDCDAATLTVYVNGERMGVALRPGMTDDITGQPIPRLQGPLRWAVDVEVASVEIDGPLPPPARHGLWATSG
Ga0310344_116462201	3300032006	Seawater	TLTLWVNGERKGVMVRPGMFLDDGGGPVARLEGPLRWVADLHNTSVAIAGPLPPPA
Ga0315316_107995971	3300032011	Seawater	VPPTHAVYAVQGLLLDLDAATLTVWVNGERKGVMVRPGIIDEEGEPVARLEGPLRWAVDLSATSVAIAGPLPPPEGATLAAGAAQ
Ga0315315_106186551	3300032073	Seawater	MLLDCDAATLTVYVNGERKGVMVQPGMTNDRGDVRRLVGPLRWVVDLTGGASVE
Ga0315315_114097921	3300032073	Seawater	ATLTVWVNGERKGVMVRPSMTDRHGDPVGRLEGPLRWATDLGRNGSVAIAGPLPLPV
Ga0315315_115507051	3300032073	Seawater	MLLDCDAATLTVWVNGERKGVAVRPGMTREGSSLNEDGELVPRLEGPLRWAVDLHGEKSSVAIDTPLPPPA
Ga0315315_115660682	3300032073	Seawater	MLLDLDAATLTVWVNGERKGVMVRPDMTDSHGRTVARLEGPLRWAVDLYQFSSVAISTWQGPPPD
Ga0315315_117315111	3300032073	Seawater	MRSVQGLLLDLDAATLTVWVNGERKGVMVRPGMTALGGQPVGRLEGPLRWAVDLYGASASVEIAAPLPPPA
Ga0315315_118454011	3300032073	Seawater	SVCAVQGMLLDLDAATLTVWVNGERKGVMVRAGMTDEEGAPVGRLEGPLRWAIDGWDCCVAIEGPLPPPA
Ga0315321_104084691	3300032088	Seawater	MRVSQGLLLDLDAATVWVNGVWKGVMVRPSMTDVDGEPVGRLEGPLRWAVALGPNASVEIAGALSPPA
Ga0310345_107184131	3300032278	Seawater	MMLDLDAATLTVWVNGERKGVMVRPGMTIDSEDDSHGEPVARLDGPLRWAVEMAHASVTIGGPLPPP
Ga0310345_118081691	3300032278	Seawater	DLDAATLTVWVNGERKGVMVRSGITDDRGQPVGRLEGPLRWAVDLAGASVAITGPLTPPA
Ga0310345_119899902	3300032278	Seawater	RRGGAPARPLRLPLPRSVLTLPVMQGMLLDLDAATLTVWVNGERRGVMVRIGMADEAGRQVNRLAGPLRWAVDFFSDASMKVAGPLPPPA
Ga0310345_121425851	3300032278	Seawater	LDLNAATLTVWVNGERKGVMVRPGMTNEHGEPVARLEGPLRWAVDLAGASVAIDGPLPPP
Ga0310345_121455942	3300032278	Seawater	QLTLLAAQGLLLDLDAATLTVWLNGERKGVAVGPGMSNMLGQPLGRLEGPLRWAVDLNIASVAIATRPFP
Ga0310345_123339221	3300032278	Seawater	MLLDCDAATLTVWVNGERKGVMVRPGMTSSTGWPVARLEGPLRWAVDLVDGGSVAIQGPLPPPA
Ga0310342_1007778011	3300032820	Seawater	LCVAQGMMLDLDAATLTVWVNGERKGVMVRPGMTIDSEDDSHGEPVARLDGPLRWAVEMAHASVTIGGPLPPP
Ga0310342_1012734182	3300032820	Seawater	MVQGLLLDLDAATLTVWVNGERRGIAIRPGMTSNHVGHVSFGEPVPRMEGPLRWAVDVYENTSVAIAGPLPPPPV
Ga0310342_1020194623	3300032820	Seawater	NGERKGVMARPGMTDSRRGEPVARLEGPLRWAVDLSGEASVAIEGPLPPAQ
Ga0310342_1023300341	3300032820	Seawater	LPFDTVCVVQGLLLDLDAATLTVWVNGERRGVMARPGMTSLDGEPVGRLEGPLRWAVEISRSSVAIAAPLPLPAA
Ga0310342_1026389961	3300032820	Seawater	VWVNGERKGVMVRPGMTNHRGEPVGRLEGPLRWAVDVYGGASVAIGGPLPPPAVPAAAAGAVVQ
Ga0310342_1033823321	3300032820	Seawater	PLHACPRPARLTLRAAQGLLLDCDAATLTVWVNGERKGVMARPGMTNRRGDAVGRLEGPLRWAVDVYGDASVAIGGPLPAPA
Ga0310342_1035615281	3300032820	Seawater	VTLRVVQGLLLDLDAATLTVWVNGERKGVMARPGMTDYDGDPVPRLEGPLRWAVDLGEFTSVVIGGPLPPPEGDLEAD
Ga0310342_1037270561	3300032820	Seawater	LTVWVNGERKGVMARPGMTDSWGRPVGRLVGPLRWAVEVGEEASVAIAGPLPPPSNA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters