NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F082230

Metagenome Family F082230

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F082230
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 63 residues
Representative Sequence MDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISGRSVLPL
Number of Associated Samples 35
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 90.00 %
% of genes near scaffold ends (potentially truncated) 18.58 %
% of genes from short scaffolds (< 2000 bps) 82.30 %
Associated GOLD sequencing projects 33
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (53.097 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(68.142 % of family members)
Environment Ontology (ENVO) Unclassified
(69.912 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(74.336 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.55%    β-sheet: 0.00%    Coil/Unstructured: 49.45%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00111Fer2 7.08
PF06150ChaB 2.65
PF05067Mn_catalase 2.65
PF01872RibD_C 2.65
PF00106adh_short 1.77
PF00719Pyrophosphatase 1.77
PF12728HTH_17 1.77
PF00296Bac_luciferase 1.77
PF11387DUF2795 1.77
PF09335SNARE_assoc 0.88
PF13419HAD_2 0.88
PF02979NHase_alpha 0.88
PF13517FG-GAP_3 0.88
PF01850PIN 0.88
PF04909Amidohydro_2 0.88
PF02796HTH_7 0.88
PF13560HTH_31 0.88
PF13649Methyltransf_25 0.88
PF08241Methyltransf_11 0.88
PF13669Glyoxalase_4 0.88
PF00657Lipase_GDSL 0.88
PF03404Mo-co_dimer 0.88
PF02371Transposase_20 0.88
PF08818DUF1801 0.88
PF00805Pentapeptide 0.88
PF13545HTH_Crp_2 0.88
PF17115Toast_rack_N 0.88
PF13472Lipase_GDSL_2 0.88
PF13493DUF4118 0.88
PF01520Amidase_3 0.88
PF00196GerE 0.88
PF10025DUF2267 0.88
PF00294PfkB 0.88
PF00072Response_reg 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 2.65
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 2.65
COG3546Mn-containing catalase (includes spore coat protein CotJC)Inorganic ion transport and metabolism [P] 2.65
COG4572Cation transport regulator ChaBInorganic ion transport and metabolism [P] 2.65
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 1.77
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.77
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.88
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.88
COG0860N-acetylmuramoyl-L-alanine amidaseCell wall/membrane/envelope biogenesis [M] 0.88
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.88
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 0.88
COG3547TransposaseMobilome: prophages, transposons [X] 0.88
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.88
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.88
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.88


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.10 %
UnclassifiedrootN/A46.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2119805011|FNTS010_GJ857YP01B7PZMNot Available541Open in IMG/M
3300000956|JGI10216J12902_101927702All Organisms → cellular organisms → Bacteria1972Open in IMG/M
3300002568|C688J35102_119930455Not Available817Open in IMG/M
3300002568|C688J35102_120276943All Organisms → cellular organisms → Bacteria → Terrabacteria group963Open in IMG/M
3300005562|Ga0058697_10013854Not Available2721Open in IMG/M
3300005562|Ga0058697_10029390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1989Open in IMG/M
3300005562|Ga0058697_10103170All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300005562|Ga0058697_10135789Not Available1059Open in IMG/M
3300005562|Ga0058697_10229217Not Available856Open in IMG/M
3300005562|Ga0058697_10369618Not Available703Open in IMG/M
3300005985|Ga0081539_10001362All Organisms → cellular organisms → Bacteria42356Open in IMG/M
3300006918|Ga0079216_10438373All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300007790|Ga0105679_10073403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus1094Open in IMG/M
3300007790|Ga0105679_10527579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1108Open in IMG/M
3300009789|Ga0126307_10008939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7213Open in IMG/M
3300009789|Ga0126307_10069645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium2767Open in IMG/M
3300009789|Ga0126307_10109085All Organisms → cellular organisms → Bacteria2198Open in IMG/M
3300009789|Ga0126307_10123378All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2064Open in IMG/M
3300009789|Ga0126307_10148761All Organisms → cellular organisms → Bacteria1873Open in IMG/M
3300009789|Ga0126307_10159273All Organisms → cellular organisms → Bacteria1808Open in IMG/M
3300009789|Ga0126307_10183658All Organisms → cellular organisms → Bacteria1677Open in IMG/M
3300009789|Ga0126307_10222629Not Available1515Open in IMG/M
3300009789|Ga0126307_10577715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium908Open in IMG/M
3300009789|Ga0126307_11465483Not Available553Open in IMG/M
3300009789|Ga0126307_11577994Not Available533Open in IMG/M
3300009840|Ga0126313_10038495All Organisms → cellular organisms → Bacteria3321Open in IMG/M
3300009840|Ga0126313_10103568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae2097Open in IMG/M
3300009840|Ga0126313_10143809Not Available1795Open in IMG/M
3300009840|Ga0126313_10350506Not Available1163Open in IMG/M
3300009840|Ga0126313_10578898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium903Open in IMG/M
3300009840|Ga0126313_10963421Not Available698Open in IMG/M
3300009840|Ga0126313_11135196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcales incertae sedis → Luteimicrobium → Luteimicrobium xylanilyticum643Open in IMG/M
3300009840|Ga0126313_11154388Not Available638Open in IMG/M
3300010036|Ga0126305_10063947All Organisms → cellular organisms → Bacteria2126Open in IMG/M
3300010036|Ga0126305_10503567Not Available808Open in IMG/M
3300010036|Ga0126305_10529939Not Available788Open in IMG/M
3300010036|Ga0126305_10618445All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300010036|Ga0126305_10746004Not Available664Open in IMG/M
3300010037|Ga0126304_10016548All Organisms → cellular organisms → Bacteria4133Open in IMG/M
3300010037|Ga0126304_10098849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1843Open in IMG/M
3300010037|Ga0126304_10306332All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300010037|Ga0126304_10342075Not Available994Open in IMG/M
3300010037|Ga0126304_10560971Not Available769Open in IMG/M
3300010037|Ga0126304_10649307Not Available712Open in IMG/M
3300010037|Ga0126304_10960565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria582Open in IMG/M
3300010038|Ga0126315_10012011All Organisms → cellular organisms → Bacteria4136Open in IMG/M
3300010038|Ga0126315_10221199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1147Open in IMG/M
3300010038|Ga0126315_10529289Not Available754Open in IMG/M
3300010038|Ga0126315_10958360Not Available571Open in IMG/M
3300010038|Ga0126315_11077053Not Available542Open in IMG/M
3300010039|Ga0126309_10403575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria819Open in IMG/M
3300010039|Ga0126309_10430039Not Available797Open in IMG/M
3300010039|Ga0126309_11027506Not Available555Open in IMG/M
3300010040|Ga0126308_10034998All Organisms → cellular organisms → Bacteria2833Open in IMG/M
3300010040|Ga0126308_10101336All Organisms → cellular organisms → Bacteria1765Open in IMG/M
3300010040|Ga0126308_10255683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium1140Open in IMG/M
3300010040|Ga0126308_10751892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium673Open in IMG/M
3300010040|Ga0126308_10925195Not Available608Open in IMG/M
3300010040|Ga0126308_11191544Not Available539Open in IMG/M
3300010040|Ga0126308_11347599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium507Open in IMG/M
3300010041|Ga0126312_10196017Not Available1411Open in IMG/M
3300010041|Ga0126312_10391409All Organisms → cellular organisms → Bacteria → Terrabacteria group988Open in IMG/M
3300010041|Ga0126312_10666221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria750Open in IMG/M
3300010042|Ga0126314_10184041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1467Open in IMG/M
3300010042|Ga0126314_10388980All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300010042|Ga0126314_10676424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium755Open in IMG/M
3300010042|Ga0126314_10844593Not Available675Open in IMG/M
3300010042|Ga0126314_10941131Not Available640Open in IMG/M
3300010042|Ga0126314_11507113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae505Open in IMG/M
3300010044|Ga0126310_10055992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2213Open in IMG/M
3300010044|Ga0126310_10276537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1145Open in IMG/M
3300010044|Ga0126310_10430642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia947Open in IMG/M
3300010044|Ga0126310_10836275Not Available711Open in IMG/M
3300010044|Ga0126310_11045660Not Available646Open in IMG/M
3300010044|Ga0126310_11279098Not Available592Open in IMG/M
3300010045|Ga0126311_10044699All Organisms → cellular organisms → Bacteria2814Open in IMG/M
3300010045|Ga0126311_10101980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans1971Open in IMG/M
3300010045|Ga0126311_10434724Not Available1016Open in IMG/M
3300010045|Ga0126311_10641689Not Available844Open in IMG/M
3300010045|Ga0126311_10713544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium802Open in IMG/M
3300010045|Ga0126311_10724273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium797Open in IMG/M
3300010045|Ga0126311_11074908Not Available661Open in IMG/M
3300010045|Ga0126311_11636786Not Available542Open in IMG/M
3300010045|Ga0126311_11890824Not Available507Open in IMG/M
3300010166|Ga0126306_10111624Not Available1990Open in IMG/M
3300010166|Ga0126306_10212891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium1463Open in IMG/M
3300010166|Ga0126306_10499745All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300010166|Ga0126306_11114738Not Available646Open in IMG/M
3300014488|Ga0182001_10108014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium877Open in IMG/M
3300018432|Ga0190275_10078089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2863Open in IMG/M
3300018432|Ga0190275_10317095Not Available1536Open in IMG/M
3300018432|Ga0190275_11126059Not Available859Open in IMG/M
3300018466|Ga0190268_10216298Not Available1064Open in IMG/M
3300018466|Ga0190268_11568023Not Available577Open in IMG/M
3300018466|Ga0190268_12107312Not Available523Open in IMG/M
3300018481|Ga0190271_10849885Not Available1037Open in IMG/M
3300018915|Ga0193591_1058370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae1320Open in IMG/M
3300019767|Ga0190267_10666271Not Available661Open in IMG/M
3300019767|Ga0190267_10857630Not Available614Open in IMG/M
3300028705|Ga0307276_10132443Not Available624Open in IMG/M
3300030513|Ga0268242_1069592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium691Open in IMG/M
3300031548|Ga0307408_100142117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium1885Open in IMG/M
3300031548|Ga0307408_101878563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium574Open in IMG/M
3300031824|Ga0307413_11860570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria540Open in IMG/M
3300031903|Ga0307407_10826007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria707Open in IMG/M
3300031995|Ga0307409_100153857Not Available2001Open in IMG/M
3300032002|Ga0307416_100191037All Organisms → cellular organisms → Bacteria1931Open in IMG/M
3300032005|Ga0307411_11748538Not Available576Open in IMG/M
3300032159|Ga0268251_10029015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium1702Open in IMG/M
3300034221|Ga0334937_004884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3138Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil68.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere6.19%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave6.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.77%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.89%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust0.89%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2119805011Soil microbial communities from sample at Multiple FACE and OTC sitesEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018915Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 0 min after wetting v1EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300030513Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300034221Biocrust microbial communities from Mojave Desert, California, United States - 33SMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FNTS010_011159502119805011SoilMDVERRKILERLNTLDPGPTEDDRRAERQATLLRAIEAEQDLKWGRLAAGIAGGSFRASGPHPVTGQ
JGI10216J12902_10192770233300000956SoilMDARRHQILRRLNAFDAGPTEEDRRAERRAEIGRAIRTEEDLKWGRLSAGIAGGVPGRSMLPL*
C688J35102_11993045523300002568SoilMDAQRHEILRRLNAFDAGPTEEDRRAERQAEIGRAIQTERDLKWGRLSAGIAGGVPGRSVLPL*
C688J35102_12027694313300002568SoilMDTRRHEILKRLNAFDAGPTEDVRRAERRAKIQRAIETEQDLKWGRLSAGIA
Ga0058697_1001385423300005562AgaveMDARRHEILRRLNAFDAGPTEENRRAERRAEIGRAIRTEEDLKWGRLSAGIAGGVSGRSVLPL*
Ga0058697_1002939013300005562AgaveMDAQRRKILQRLNAFDAGPTEDDRRAERQATIRRAIEAEEDLKWGRLSAGSAGGIEGRSVLSL*
Ga0058697_1010317023300005562AgaveMAARRHQILRRLNAFDAGPTEEERRAERRAEIGRAIETERDLKWGRLSAGNAGGVPGRSVLPL*
Ga0058697_1013578913300005562AgaveAQRRKILQRLNAFDAGPTEDDRRAERQATIRMAREAEEDLKWGRLSAGTAGGIGGRSVLPL*
Ga0058697_1022921713300005562AgaveMDAQRREILKRLDAFDAGPTEDARRAERQATIRRAMETEEDLKWRRLSAGNAGGILGRSVFPL*
Ga0058697_1036961823300005562AgaveVDARRHEILKRLNAFDAGPIEDLRRAERQAEIRRAIETEQGLKWGRLAAGIAGGVSGRSVLPL*
Ga0081539_1000136263300005985Tabebuia Heterophylla RhizosphereMSAERRRLILERLNTFDTGPTEDDRRAELRDIIERAIATERELRWGRLSAGIAGGIFGRSAASR*
Ga0079216_1043837313300006918Agricultural SoilMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEEDLKWGRLSAGIAGGISGRSVLPL*
Ga0105679_1007340323300007790SoilMDAERRRRILERLNALDAGPTEEDRRDERRAEIGRAIETERELRWGRLSVGIAGGIFGRSAAPP*
Ga0105679_1052757923300007790SoilVDARRHEILKRLNAFDAGPTEDLRRAERQAEIRRVIETEQGLKWGRLSAGIAGGVSGRSVLPL*
Ga0126307_1000893963300009789Serpentine SoilMDAQRRKILERLDAFDAGPTEDDRRAERQDKIRRAIEAEQDLKWGRYSAGIAGGISGRSVLPI*
Ga0126307_1006964513300009789Serpentine SoilMDAQRRQILKRLNAFDAGPTEDDRRAERQAATQRAIEAEQDLKWGRISAGIAGGISGRS
Ga0126307_1010908513300009789Serpentine SoilMDARRHEILKRLNAFDAGPTEDLRRAKRQAKIQRAIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126307_1012337823300009789Serpentine SoilMDAQRHEILRRLNAFDAGPTEDDRRAERRAEIGRAIQTERDLKWGRLSAGIAGGVPGRSVLPL*
Ga0126307_1014876123300009789Serpentine SoilMDARRRKILERLDALEAGPTEDDRRTERRATIRRAIEAEEDLKWGRLSAGNVGA*
Ga0126307_1015927333300009789Serpentine SoilMDAQRRKILKRLDAFDAGLTEDDRRAERQAKIRRAIEAEQDLKWGRYSAGIAGGISGPSVLPI*
Ga0126307_1018365823300009789Serpentine SoilMDARRHEILRRLNAFDAGPTEDARRAERSAEIRKAIQTEQDLMWGRLSAGIAGGVPGRSALPL*
Ga0126307_1022262923300009789Serpentine SoilMDAQRRKILERLNAFDTGPTEDDRRVERQATIRRAIEAEQDLKWGRLLAGSAGGIGGRSVLPL*
Ga0126307_1057771523300009789Serpentine SoilMDARRRKILERLDAFDTGPTQDERRAGRRAMIRRAIEAEEDLKWGRLSAGNAGGISGRSVLSL*
Ga0126307_1146548313300009789Serpentine SoilMGSDQRRQILVRLDTLNAGPTEDDRRAGRQATIEKAVETEQALRWGRLSAGIAGGIFGRSAASR*
Ga0126307_1157799413300009789Serpentine SoilRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRISAGIAGGISGRSVLPL*
Ga0126313_1003849523300009840Serpentine SoilMNAQRRQILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISGRSVLATSS*
Ga0126313_1010356823300009840Serpentine SoilMDARRRKILERLNAFDAGPTEDDRRAERQAIIRRAIEAEQVLKWGRLSAGNTGDISGRSIRSL*
Ga0126313_1014380933300009840Serpentine SoilMDPQRRKILERLNAFDAGPTEDNRRAERQATILRAIDAEEGLKWGRLSAGTAGGIGGRSVLPL*
Ga0126313_1035050623300009840Serpentine SoilMDAQRRQILKRLDAFDAGPTEDDRRAERQAAIQRALEAEEDLKWGRLSAGIAGGI
Ga0126313_1057889813300009840Serpentine SoilMDAQRHEILRRLNAFDAGPTEDDRRAERRAEIGRAIQTERDLKWGRLSAGIAGGVPGRWVLPL*
Ga0126313_1096342113300009840Serpentine SoilRAVMDAQRRKILERLNAFDTGPTEDDRRAERQATIRRAIEAEQDLKWGRLLAGSAGGIGGRSVLPL*
Ga0126313_1113519613300009840Serpentine SoilMDSRRHEILKRLNAFDAGPTEDDRRAERQAKIRRAIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126313_1115438813300009840Serpentine SoilQKARRSAMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRALEAEEDLKWGRLSAGIAGGISGRSVFPL*
Ga0126305_1006394753300010036Serpentine SoilMDAERRQILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGMAGGISGRSVLPL*
Ga0126305_1050356713300010036Serpentine SoilMDAQRRRILKRLNAFDAGPTEDDRRVERQAATQRAVEAEQDLKWGRFSAGIAGGISGRSVLPL*
Ga0126305_1052993923300010036Serpentine SoilMDAQRRKILERLNAFDTGPTEDDRRAERQATIRRAIEAEQDLKWGRLLAGSAGGIGGRSVLPL*
Ga0126305_1061844513300010036Serpentine SoilMDAQRRKILKRLDAFDAGLTEDDRRAERQAKIRRAIESEQDLKWGRYSAGIAGGISGPSVLPI*
Ga0126305_1074600413300010036Serpentine SoilMDARRHEIPRRLDAFGAGPNEDERRAERRAEIRRAIKAEQDLKWGRLSAGIAGGIPGRSFLSL*
Ga0126304_1001654863300010037Serpentine SoilMDAQRRQILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGIPGRSVLPL*
Ga0126304_1009884923300010037Serpentine SoilMDAQRRQILKRLNAFDAGPTEDDRRAERQAATQRAIEAEQDLKWGRLSAGMAGGISGRSVLPL*
Ga0126304_1030633223300010037Serpentine SoilMDARRRKILQRLDALEAGPTEDDRRAERRTMIRRAIEAEEDLKWGRLSAGNAGGIAGRSVLPL*
Ga0126304_1034207513300010037Serpentine SoilMDAQRRRILKRLNAFDAGPTEDDRRAERQAATQRAIEAEQDLKWGRFSAGMAGGISGRSILPL*
Ga0126304_1056097113300010037Serpentine SoilRRAAMDARRHEILKRLNAFDAGPTEDLRRAKRQAKIQRAIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126304_1064930713300010037Serpentine SoilMDAQRHEILRRLNAFDAGPTEDDRRAERQAEIGRAIQTERDLKWGRLSAGIAGGVPGRSVLPL*
Ga0126304_1096056513300010037Serpentine SoilMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISGRSVLLL*
Ga0126315_1001201123300010038Serpentine SoilMDAQRRRILKRLNAFDAGPTEDDRRAERQAATQRAIEAEQDLKWGRFSAGMAGGISGRSVLPL*
Ga0126315_1022119913300010038Serpentine SoilMDARRHEILKRLNAFDAGPTEDLRRAERRAKIQRAIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126315_1052928913300010038Serpentine SoilMDAQRRKILQRLNAFDAGPTENNRRAERQATILRAIEAEEGLKWGRLSAGTAGGIGGRSVLPL*
Ga0126315_1095836013300010038Serpentine SoilSEYQSARRSAMDAQRRKILNRLDAFDAGLTEDDRRAERQAKIRRAIEAEQDLKWGRYSACIAGGISGPSVLPI*
Ga0126315_1107705313300010038Serpentine SoilRSAMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISGRSVLPL*
Ga0126309_1040357523300010039Serpentine SoilMDAQRRRILKRLDAFDASPTEDARRAERQAAIQRAIEAEEDLKWGRLSAGIAGGMWGISGRSGLPL*
Ga0126309_1043003923300010039Serpentine SoilMDARRRKILQRLDALEAGPTEDDRRALRRATIRRTIEAEEDLKWGRLSAGNAGA*
Ga0126309_1102750613300010039Serpentine SoilMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRALEAEEDLKWGRLSAGIAGGISGRSVFPL*
Ga0126308_1003499833300010040Serpentine SoilMDAQRRRILKRLNAFDAGPTEDDRRAERQAATQRAIEAEQDLKWGRFSASMAGGISGRSVLPL*
Ga0126308_1010133613300010040Serpentine SoilMDAERRQILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGIPGRSVLPL*
Ga0126308_1025568323300010040Serpentine SoilMDAQRRKILERLNAFDTGPTEDDRRVERQATIRWAIEAEQDLKWGRLLAGSAGGIGGRSVLPL*
Ga0126308_1075189213300010040Serpentine SoilMDAQRRKILQRLNAFDAGPTENNRRAERQATILRAIEAEEGLKWGRLSAGTAGGIEGRSV
Ga0126308_1092519523300010040Serpentine SoilSAMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEEDLKWGRLSAGIAGGISGRSVLLL*
Ga0126308_1119154423300010040Serpentine SoilMDARRHEILRRLNAFDVGPTEDARRAERRAEIRRAIQTEQNLKWGRLSAGMAGG
Ga0126308_1128465513300010040Serpentine SoilMDARRHEILKRLNAFDAGPTEDPRRAERRAKIQRAIETEQDLKWG
Ga0126308_1134759923300010040Serpentine SoilMDAQRRKILERLNAFDAGPTEDDRRAERQATILRAIEAEEDLKWGRLSAGTAG
Ga0126312_1019601713300010041Serpentine SoilMDAQRRKILERLNAFDAGPTEDDRRAERQATTRRAIEAEQDLKWGRLSAGIAGGILGRSVLPL*
Ga0126312_1039140923300010041Serpentine SoilMDARRHEILKRLNAFDAGPTEDLRRAERQAKIQRAIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126312_1066622113300010041Serpentine SoilMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEHDLKWGRLSAGIAGGISGRSALPL*
Ga0126314_1018404123300010042Serpentine SoilMDAQRRRILKRLDAFDASPTEDARRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISGRSVLPL*
Ga0126314_1038898013300010042Serpentine SoilMDAQRRKILQRLNAFDAGPTEDDRRAERQATIRRAIEAEEDLKWGRLSAGSAGGIGGRSVLPL*
Ga0126314_1067642413300010042Serpentine SoilAQRHEILRRLNAFDAGPTEDDRRAERRAEIGRAIQTERDLKWGRLSAGIAGGVPGRSVLPL*
Ga0126314_1084459313300010042Serpentine SoilMDAQRRKILNRLDAFDAGLTEDDRRAERQAKIRRAIEAEQDLKWGRYSACIAGGISGPSVLPI*
Ga0126314_1094113113300010042Serpentine SoilMDARRHEILKRLNAFDAGPTEDLRRAERQAKIRRAIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126314_1150711323300010042Serpentine SoilMDARRRKILERLNAFDAGPTEDDRRAERQAIIRRAIEAEQVLKWGRLSAGNT
Ga0126310_1005599223300010044Serpentine SoilMDAPRHEILRRLNAFDAGPTEDERRAERSAEIRRAIEAERHLKWGRLSAGNAGGIPGRSVLPL*
Ga0126310_1027653723300010044Serpentine SoilMDARRHEILKRLNAFDAGPTEDDRRAERQAKIKRVIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126310_1043064223300010044Serpentine SoilMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISGRSVLPL*
Ga0126310_1083627513300010044Serpentine SoilMDTRRHEILKRLNAFDAGPTEDLRRAERQAKIKRVIETEQDLKWGRLSAGIAGGVSGRSVLPL*
Ga0126310_1104566023300010044Serpentine SoilMDAQRREILKRLDAFDAGPTEDDRRAERQATIWRAMETEEDLKWGSLSAGKAGGILGRSVLPL*
Ga0126310_1127909813300010044Serpentine SoilMDAERRKILKRLDAFDAGPTEDDRRAERQAKIRRALEAEQDLKWGRYSAGIAGGISGRSVLPI*
Ga0126311_1004469913300010045Serpentine SoilMDAQRRKILERLNAFDAGPTEDDRRAERQATILRAIEAEEDLKWGRLSAGTAGGIEGRSVLPL*
Ga0126311_1010198023300010045Serpentine SoilMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISGRSVLSL*
Ga0126311_1022966523300010045Serpentine SoilMDAQRRRILKRLDAFDASPTEDARRAERQAAIQRAIEAEQDLKWGRLSAGI
Ga0126311_1043472423300010045Serpentine SoilMDARRRKILERLNTLDTNPTEDERRAERRATIRRAIEADEDLKWGRLSAGNAGGTAGRSVLPL*
Ga0126311_1064168923300010045Serpentine SoilMDARRHEILKRLNALDMGPTEDARRAERQAEIRRAIQTEQDLKWGRLSAGIAGGVPGRSVLPL*
Ga0126311_1071354423300010045Serpentine SoilMDARRHEILRRLNAFDVGPTEDARRAERRAEIRRAIQTEQDLKWGRLSAGMAGGVPGRSYPCSVMRAQ
Ga0126311_1072427323300010045Serpentine SoilMDAQRRKILQRLNAFDAGPTENNRRAERQATIRRAREAEEDLKWGRLSAGTAGGIGGRSVLPL*
Ga0126311_1074898213300010045Serpentine SoilMDARRHEILKRLNAFDAGPTEDLRRAERRAKIQRAIETEQDLKWGRLSA
Ga0126311_1107490813300010045Serpentine SoilMDAQRGRILKRLNAFDAGPTEDDRRAERQAATQRAIEAEQDLKWGRFSAGMAGGISGRSVLTL*
Ga0126311_1163678613300010045Serpentine SoilMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEEDLKWGRLSAGIAGGISGRSVLLL*
Ga0126311_1189082413300010045Serpentine SoilMDARRHQILRRLNAFDAGPTEEDRRAERRAEIGRAIRTEEDLKWGRLSAGIAGGVPGRSVLPL*
Ga0126306_1011162423300010166Serpentine SoilMDAQRRKILERLNAFDTGPTEDDRGVERQATIRRAIVAEQDLKWGRLLAGSAGGIGGRSVLPL*
Ga0126306_1021289133300010166Serpentine SoilMDAQQCKILERLNAFDAGPTEDDRRAERQATIRRAIEAEQDLKWGRLSAGSAGGIGDRSVLPL*
Ga0126306_1049974533300010166Serpentine SoilMDARRRKILERLDALEAGPTEDDRRTERRATIRRAIEAEEDLKWGRLSAGNVGGIAGRSVLPL*
Ga0126306_1111473823300010166Serpentine SoilMDAQRRRILKRLDAFDTGPTEDDRRAERQAAIQRAIEAEQDLKWGRLSAGIAGGISG
Ga0182001_1010801413300014488SoilMEAQRRNILERLNAFDAGPTEDDRRAERQATIRRAREAEENLKWGRLSAGTAGGIGGRSVLPL*
Ga0190275_1007808963300018432SoilMDAQRRRRILQRLNTLDAGPTEDERRAERRAAIGRAIETEQELRWGRLSAGIAGGIFGRWTVNH
Ga0190275_1031709523300018432SoilMDARRRKILQRLDALEAGPTEDDRRAERRAEIRRAIQAEEDLKWGRVSAGNAGGIAGRSVLPL
Ga0190275_1112605913300018432SoilMDAQRRRILKRLDALDAGPTEDERRAERQAAIQRAIEAEQDLKWGRLSAGIAGGIPGGSVLPQ
Ga0190268_1021629823300018466SoilMDAQRRRRILERLNTFDAGPTEDERRAERRAAIGRAIETEQELRWGRLSAGIVGGMFGGSTVNH
Ga0190268_1156802313300018466SoilMDAQRRKIIERLNAFDAGPTEDNRRAERQATIRMAREAEEDLKWGRLSAGTAGGIGGRSVLPL
Ga0190268_1210731213300018466SoilMDARQRKILERLDALEAGPTEHDRRAERRTMIRRAIEAEEDLKWGRLSAGNAGGIAGRSILPL
Ga0190271_1084988523300018481SoilMDAQRHEILRRLNAFDAGPTEDDRRAERQAEIGRAIQTERDLKWGRLSAGIAGGVPGRSVLPL
Ga0193591_105837023300018915SoilMDAQRHKILNRLNAFDSGPTEDDRRAQRQATIRMAIAAEENLKWGRLSAGNAGGIPGRSVLLR
Ga0190267_1066627123300019767SoilMDAQRHEILRRLNAFDAGPTEEDRRAERRAEIGRAIETERDLKWGRLSAGIAGGVPGRSVLPL
Ga0190267_1085763023300019767SoilMDARRHEILRRLNTFDAGPTEDARRAERRAEIRRAIRTEQDLKWGRLSAGIAGGVPGRSVLPL
Ga0307276_1013244313300028705SoilMDARRHQILRRLNAFDAGPTEDDRRAERRAEIVRAIETELGLKWGRLSAGIAGGVPGRSVLPL
Ga0268242_106959223300030513SoilMEAQRRNILERLNAFDAGPTEDDRRAERQATIRRAREAEENLKWGRLSAGTAGGIGGRSVLPL
Ga0307408_10014211733300031548RhizosphereMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEEDLKWGRLSAGIAGGISGRSVLPL
Ga0307408_10187856323300031548RhizosphereMNAERRSLILERLNTLDAGPTEDDRRAERRDIIERAIDTERELRWGRLSAGIAGGIFGRSAATR
Ga0307413_1186057013300031824RhizosphereMDAQRRRILKRLDAFDAGPTEDDRRAERQAAIQRAIEAEEDLKWGRLSAGIAGGISGRSVLLL
Ga0307407_1082600723300031903RhizosphereMDAQRRRILKRLDAFDAGPTEDDRRAERQATIQRAIEAEEDLKWGRLSAGIAGGISGRSVLPL
Ga0307409_10015385723300031995RhizosphereMDAQRRKILERLNAFDTGPTEDDRRVERQATIRWAIEAEQDLKWGRLLAGSAGGIGGRSVLPL
Ga0307416_10019103753300032002RhizosphereSATMSAERRRLILERLKTLDAGPTEDDRIAERRDMIERAIDTERELRWGRLSAGIAGGIFGRSAATR
Ga0307411_1174853823300032005RhizosphereRAVMDAQRRKILERLNAFDTGPTEDDRRVERQATIRWAIEAEQDLKWGRLLAGSAGGIGGRSVLPL
Ga0268251_1002901543300032159AgaveMDAQRRKILQRLNAFAAGPTEDDRRAERQATIRRAIEAEEDLKWGRLSAGSAGGIEGRSVLSL
Ga0334937_004884_31_2223300034221BiocrustMDARRHEILRRLNAFDAGPTEDDRRAERRAEIKRVKETERDLKGGRLSAGIAGGVPGRSTLPL


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