Metagenome Family F082119

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Overview

Basic Information
Family ID	F082119
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	81 residues
Representative Sequence	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHAMVLALFYHKKKDNSFSQNMRVSIFQMFLYLLLIHQN
Number of Associated Samples	20
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	20.35 %
% of genes from short scaffolds (< 2000 bps)	93.81 %
Associated GOLD sequencing projects	17
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (48.673 % of family members)
Environment Ontology (ENVO)	Unclassified (50.442 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (98.230 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110. 1Ga0068877_100626554 2Ga0068877_101637902 3Ga0068877_101913793 4Ga0068877_103455291 5Ga0068877_103514471 6Ga0068877_103670113 7Ga0068877_104179201 8Ga0068877_104534351 9Ga0068877_105214481 10Ga0068877_105408252 11Ga0068877_105528151 12Ga0068877_106065311 13Ga0068877_106997781 14Ga0068877_107247822 15Ga0068877_107337322 16Ga0068877_107464391 17Ga0068876_100558332 18Ga0068876_100586033 19Ga0068876_100785412 20Ga0068876_101746522 21Ga0068876_102333071 22Ga0068876_102400971 23Ga0068876_102841602 24Ga0068876_103529801 25Ga0068876_103942951 26Ga0068876_104073121 27Ga0068876_104372011 28Ga0068876_104617061 29Ga0068876_105417561 30Ga0068876_105885321 31Ga0068876_106571551 32Ga0068876_107275151 33Ga0068876_107297962 34Ga0068876_107524701 35Ga0068876_107738011 36Ga0068872_102392231 37Ga0114338_10251892 38Ga0114338_10333234 39Ga0114338_10619293 40Ga0114338_10697282 41Ga0114338_10711151 42Ga0114338_10712823 43Ga0114338_10719732 44Ga0114338_10723342 45Ga0114338_10737582 46Ga0114338_10829741 47Ga0114338_10902062 48Ga0114338_11541311 49Ga0114338_11591132 50Ga0114338_11847261 51Ga0114338_11857002 52Ga0114338_12262751 53Ga0114339_10465102 54Ga0114339_10528172 55Ga0114339_10681543 56Ga0114339_10712791 57Ga0114339_10777832 58Ga0114339_10835681 59Ga0114339_10955341 60Ga0114339_11080501 61Ga0114339_11233191 62Ga0114339_12241262 63Ga0114339_12264761 64Ga0114339_12508772 65Ga0114342_10934211 66Ga0114345_10581742 67Ga0114348_10247592 68Ga0114348_10378581 69Ga0114348_10609862 70Ga0114348_10698593 71Ga0114348_11381721 72Ga0114356_12039072 73Ga0114356_12987494 74Ga0114356_13222031 75Ga0114356_14130551 76Ga0114359_11174891 77Ga0114359_11224661 78Ga0114359_11283501 79Ga0114359_12451181 80Ga0114349_10562541 81Ga0114349_10625221 82Ga0114349_10869911 83Ga0114349_11073281 84Ga0114349_11089121 85Ga0114349_11177711 86Ga0114349_12712312 87Ga0114349_12760651 88Ga0114361_10373904 89Ga0114361_11073041 90Ga0114357_11508381 91Ga0102814_103687721 92Ga0102812_106727661 93Ga0211726_104919322 94Ga0211735_114790841 95Ga0209972_104122451 96Ga0209985_100520841 97Ga0209985_101124412 98Ga0209985_101925071 99Ga0209985_102291002 100Ga0209985_102986071 101Ga0209985_102987022 102Ga0209985_103583491 103Ga0209985_103804221 104Ga0209985_104066081 105Ga0209985_104171621 106Ga0209990_100778311 107Ga0209990_101506542 108Ga0209990_102038711 109Ga0209990_102256652 110Ga0209990_102265823 111Ga0209990_103369241 112Ga0209990_104483361 113Ga0209990_104885251
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110. 1Ga0068877_100626554 2Ga0068877_101913793 3Ga0068877_103455291 4Ga0068877_104179201 5Ga0068877_105528151 6Ga0068877_107464391 7Ga0068876_101746522 8Ga0068876_107297962 9Ga0114338_11541311 10Ga0114338_11847261 11Ga0114349_10562541
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1Ga0114338_12262751 2Ga0068877_100626554 3Ga0068877_101913793 4Ga0068877_103670113 5Ga0068877_104179201 6Ga0068877_104534351 7Ga0068877_105408252 8Ga0068877_105528151 9Ga0068877_106065311 10Ga0068877_106997781 11Ga0068877_107247822 12Ga0068876_100558332 13Ga0068876_100785412 14Ga0068876_104617061 15Ga0068876_107275151 16Ga0068876_107297962 17Ga0114338_10251892 18Ga0114338_10697282 19Ga0114338_10829741 20Ga0114339_10465102 21Ga0114339_10777832 22Ga0114339_10835681 23Ga0114339_12264761 24Ga0114342_10934211 25Ga0114359_12451181 26Ga0114349_10562541 27Ga0114349_10869911 28Ga0114349_12760651 29Ga0114361_10373904 30Ga0102812_106727661 31Ga0211735_114790841
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.48% β-sheet: 0.00% Coil/Unstructured: 43.52%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005525\|Ga0068877_10062655	Not Available	2413	Open in IMG/M
3300005525\|Ga0068877_10163790	Not Available	1351	Open in IMG/M
3300005525\|Ga0068877_10191379	Not Available	1229	Open in IMG/M
3300005525\|Ga0068877_10345529	Not Available	850	Open in IMG/M
3300005525\|Ga0068877_10351447	Not Available	841	Open in IMG/M
3300005525\|Ga0068877_10367011	Not Available	818	Open in IMG/M
3300005525\|Ga0068877_10417920	Not Available	753	Open in IMG/M
3300005525\|Ga0068877_10453435	Not Available	715	Open in IMG/M
3300005525\|Ga0068877_10521448	Not Available	654	Open in IMG/M
3300005525\|Ga0068877_10540825	Not Available	639	Open in IMG/M

Showing 1 to 10 of 113 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.23%
Marine	Environmental → Aquatic → Marine	1.77%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.77%
Lake	Environmental → Aquatic → Freshwater → Lake	49.56%
Lentic	Environmental → Aquatic → Freshwater → Lentic	48.67%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	49.56%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	48.67%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	48.67%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	47.79%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300008105	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, sample E2014-0046-100-LTR	Environmental	Open in IMG/M
3300008106	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTR	Environmental	Open in IMG/M
3300008109	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-53-LTR	Environmental	Open in IMG/M
3300008112	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-100-LTR	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008121	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-100-LTR	Environmental	Open in IMG/M
3300008122	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTR	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068877_100626554	3300005525	Freshwater Lake	MTTPKKNFLLEFTDVTEAETNGIIKHVRDPYDREQTNSNNNFHAVVLALFYRKKKDNTFTQNMRVSIFQMFLYLLFIHQH*
Ga0068877_101637902	3300005525	Freshwater Lake	MTTPKKNFLLEFTDVTEVKTKAIINHIRDPHHRDQANTNNNFHAVVLALFYRKRKDQSFSQNMRVSIFQMFLYLLIIHQN*
Ga0068877_101913793	3300005525	Freshwater Lake	MTTSKKNFLLEFTDVTDIETKAIINHLRDPEHKDQANTNNNFHAIVLALFYHKNKDKSFSRNMRVSILQMFLYLLLIHQN*
Ga0068877_103455291	3300005525	Freshwater Lake	TATSNIIMATPKKNFLLEFSDVTEAETNGIIKLIRDPHDKEQANVNNNFDCVVLSLFYRKKKDNSFSQNMRVSIFQMFP*
Ga0068877_103514471	3300005525	Freshwater Lake	MTTPKKNFLLEFTDVTEAETNGIIKQVRDPHDKEQANSNNNFHAVVLASFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH*
Ga0068877_103670113	3300005525	Freshwater Lake	MTTPKKNFLLEFTDVTEAETSGNIKHVRDPHDREQANSNNNFHAVLLALFYHKNKDNSFTQNMRVSIFQIFLYLLFIHQH*
Ga0068877_104179201	3300005525	Freshwater Lake	MATPKKNFLLEFLDVTETEINGIIKLIRDPQDKEQANSNNNFHCVVLSLFYHKKKDNSFSQNMRVSILKCFHIYYLLIHTNI*
Ga0068877_104534351	3300005525	Freshwater Lake	MTTSKKNFLLEFTDVTEAEARGIIKHDRDPHDREQANSNNNFHAVVLALFYRTKKDNSFTQNMRVSIFQMFLYLLFIHQH*
Ga0068877_105214481	3300005525	Freshwater Lake	MATPNKNILLEFSDVTEAETNGIIKLIRDPHDEELANSNNNFHCMVLSLFYCEKKDHSFSQNKRVSIFQMFPYLLFIHQH*
Ga0068877_105408252	3300005525	Freshwater Lake	MATPKKNFLLEFTDVTEAETNGIIKHIRDPHDKEQANTNNNFHCMVISLFYRKKKDNSFSQNMRVSIFQKFPCFLFIHQH*
Ga0068877_105528151	3300005525	Freshwater Lake	MTTSKKNFLLEFTDVTQDKTKAIINLIRHPHHKDQANTNNNFHAMVLAFFYRKKKDDSDSFSQNMRVSIFKMFLFIINSSKLIFYTFFFF*
Ga0068877_106065311	3300005525	Freshwater Lake	MTTANKNFLLEFTDVTNIKTKAIIDHIKDPEHKDQANTNNNFHAVVLALFYCKKKDKSFSLNMRVSILQMFLYLLLIHQN*
Ga0068877_106997781	3300005525	Freshwater Lake	MTTPKKNFLLEFTDVTEAERNVIINHVRDPYDKEHANSNNNFHAMVLALFYCKKKDNLFTQNIRVSIFQMFLYLLFIHQH*
Ga0068877_107247822	3300005525	Freshwater Lake	NIIMATPKKNFLLEFSDVTEAETNGIIKLIRDPHDKEQANVNNNFHCAVLSLFYRKKKDNSFSQNMMVSIFQMFPYLLFIHQH*
Ga0068877_107337322	3300005525	Freshwater Lake	MTTSKKNFLLEFTDVTQDKTKTIINHIRHPHHKDQANTNNNFHAVVLSLFYRKKKDDSDSFSQNMRVSIFKMFLYLLLIHHN*
Ga0068877_107464391	3300005525	Freshwater Lake	MTTSKKTFLLEFTDVTQDKTKAIINLIRHPHHKDQANTNNNFHAMVLVFFYHKKKDDSDSFSQNMRVSI
Ga0068876_100558332	3300005527	Freshwater Lake	MTTPKKNFLLEFTDVTEAETSGIIEHVRDPHDREQANSNNNFHAMVLASFYHKKKDNSFTQNMRVSILQMFLYLLFIHQH*
Ga0068876_100586033	3300005527	Freshwater Lake	MTTPKKNFLLEFTDVTEAETSGNIKHVRDPHDREQANSNNNFHAVLLALFYHKNKDNSFTQNMRVSIFQMFLYLLYIHQHLYLILFFYF*
Ga0068876_100785412	3300005527	Freshwater Lake	MTTAKKNFLLEFTDVTNLETKAIIDHIRDPEHKDQSNTSNNFHAVVLALFYRKKKDDSDSFSQNMRVSILQMFLYLLLIHQN*
Ga0068876_101746522	3300005527	Freshwater Lake	MATPNKNILLEFSDVTEAETNGIIKLIRDPHDEELANSNNNFHCMVLSLFYCEKKDHSFSQNKRVSIFQMFPYLFFIHQH*
Ga0068876_102333071	3300005527	Freshwater Lake	MTTSKKNFLLEFTDVTQDKTKAIMNHIRHPHHKDQANTSNNFHAIVLAFFYHKKKDDSDSFSQNMRVSIFKMILYLLLIHQN*
Ga0068876_102400971	3300005527	Freshwater Lake	MTTPKKNFLLEFTDVTEVKTKAIINHIRDPHHRDQANTNNNFHAVVLALFYRKRKDQSFSQNMRVSIFQMFLYLL
Ga0068876_102841602	3300005527	Freshwater Lake	MTTPKKKFLLEFTDVTEAETSGIIKHVRDPHDREQANSNNNFHAMVLALFCHKKKDNSFIQNMRVSIFQMFLDLLFIHQH*
Ga0068876_103529801	3300005527	Freshwater Lake	MTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHKDQANTNNSFHAMVLAFLYHKKKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0068876_103942951	3300005527	Freshwater Lake	MATPKKNFLLEFSDVTEAETNRIIKLIRDPQGKEQANINNNFHCVVVSLFYHNKKDNSFSQNMRVSILKFLHIYYLFINTNI*
Ga0068876_104073121	3300005527	Freshwater Lake	MTTPKKNFLLEFTDVTEAETNGIIKHVRDPHDKEQANSNNNFHAVVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIH
Ga0068876_104372011	3300005527	Freshwater Lake	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHSVVLALFYRKKKDNSFSQNMRVSIFQMFLYLLLIHQN*
Ga0068876_104617061	3300005527	Freshwater Lake	MTSPKKNFLLEFTDVTEAETNGIIKHVRDPHDRDQANSNNNFHAMVLALFYCKKKDISFTQNMRVSIFQMFLYLLFIHQH*
Ga0068876_105417561	3300005527	Freshwater Lake	MTTSKKNFLLEFTDVTEAETSGIVNHDRDQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH*
Ga0068876_105885321	3300005527	Freshwater Lake	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHAVVLALFYCKKKDNSFSQNMRVSIFQMFLYLLLIHQN*
Ga0068876_106571551	3300005527	Freshwater Lake	MTTSKKNFLLEFTDVTQDETKAIINHKRHPHHKDQANTNNNFHAMVLAFFYHKKKDGSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0068876_107275151	3300005527	Freshwater Lake	SKIIMTTAKKNFLLEFTDVTSVETKAIIDHIRDPKHKDQANTNNNFHAVVLALFYRKNKDKSFSQNMRVSILQMFLHLLLIHQN*
Ga0068876_107297962	3300005527	Freshwater Lake	FTATSKIIMTTPKKNFLLEFKDVTEVERKVIINHIRDPHHRDQANTNNNFHAVVLALFYCKRKDQSFSQNMRVSIFQMFLYLLFIHQN*
Ga0068876_107524701	3300005527	Freshwater Lake	MTTAKKNFLLEFTDVTNVETKAIIDHIRDPEHKDQANTSNNFHAVMLAFFYRKNKGKSFSQNIRVSILQMFLYLFLIHQN*
Ga0068876_107738011	3300005527	Freshwater Lake	MTTPKKNFLLEFTDVTEAERNAIIKHVRGPHDKEQANSNNNFHAMVLALFYCQKKDDLFTQNMRVSIFQMFLYIYYLFINTNI*
Ga0068872_102392231	3300005528	Freshwater Lake	MTTPKKNFLLEFTDLTEAETNGIIKHVRDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH*
Ga0114338_10251892	3300008105	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAETNGIIKHVGDPHDKEQANNNNNFHCVVLALFYHKKKDNSFSQNMRLSIFQMFQYLLFIHQH*
Ga0114338_10333234	3300008105	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINLIRHPHHKDQANTNNNFHAVVLAFFYCKKKDDSDSFSQNMRVSIFKMFLYLLFIHQN*
Ga0114338_10619293	3300008105	Freshwater, Plankton	HNFTATSKIIMTTSKKNFLLEFTDVTQDKTKAIINHIRYPHHKDQANTNNNFHAMVLAFFYPKEKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114338_10697282	3300008105	Freshwater, Plankton	MATPKKNFLIEFSDVTEAETNGIIKLIRDPHDKEQANSNNNFHCMVLSLFYCKKKDNSFSQNMRVSIFKMFPYYLFILQH*
Ga0114338_10711151	3300008105	Freshwater, Plankton	MTTSKKNFLLEFTDVTDVETKAIVNHIRDPEHKDQANTNNNFHAIVLALFYRKNKDKSFSQNMRVSILQMFLYLLLIHQN*
Ga0114338_10712823	3300008105	Freshwater, Plankton	MATPKKNFLLEFSDVTEAETNGIIKLIRDPHDKEQANVNNNFHCAVLSLFYRKKKDNSFSQNMMVSIFQMFPYLLFIHQH*
Ga0114338_10719732	3300008105	Freshwater, Plankton	MTPSKKNFLLEFTDVTEVKAKATINHIRDPHHRDQANTNNNFHAMVLALFYRKKKDNTFNQNMRVSIFQMLLYLLSIHQN*
Ga0114338_10723342	3300008105	Freshwater, Plankton	MTTSKKTFLLEFTDVTQDKTKAIINLIRHPHHKDQANTNNNFHAMVLVFFYHKKKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114338_10737582	3300008105	Freshwater, Plankton	MTTPKKIFLLEFADVTEAETSGIIKHVRDPHDREQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQ
Ga0114338_10829741	3300008105	Freshwater, Plankton	MTAPKKNFLLEFTDATEVETNAIITHVRDPHDRDQANSNNNFHAVVLALFYRKKKDNSFTQNMRVSIFQMSLYLLFIYQN*
Ga0114338_10902062	3300008105	Freshwater, Plankton	MATPKKNFLLEFLDVTETEINGIIKLIRDPQDKEQANSNNNFHCVVLSLFYHKKKDNSFSQNMRVSILKCFHIY*
Ga0114338_11541311	3300008105	Freshwater, Plankton	HNFTATSKIIMTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHKDQANTNNNFHAVVLAFFYHKKKDDSDSFSQNMRVSIYKMFLHLL*
Ga0114338_11591132	3300008105	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAERNAIIKHVRGPHDKEQANSNNNFHAMVLALFYCQKKDDLFTQNMRVSIFQMFLYIYYLFI
Ga0114338_11847261	3300008105	Freshwater, Plankton	LEFTDVTQDKTKTIINHIRHPHHKDQANTNNNFHAVVLSLFYRKKKDDSDSFSQNMRVSIFKMFLYLLLIHHN*
Ga0114338_11857002	3300008105	Freshwater, Plankton	MTTANKNFLLEFTDVTNVKTKAIINHIRDPEHKDQANTNNNFHAVALALFYCKNKDKSFSTNMRVSILQVFLYLLLIHQN*
Ga0114338_12262751	3300008105	Freshwater, Plankton	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHAMVLALFYHKKKDNSFSQNMRVSIFQMFLYLLLIHQN*
Ga0114339_10465102	3300008106	Freshwater, Plankton	MTTPKKKFLLEFTDVTEAETSGIIKHDRDPHDREQANSNNNFHAMVLALFCHKKKDNSFIQNMRVSIFQMFLDLLFIHQH*
Ga0114339_10528172	3300008106	Freshwater, Plankton	MATPKKNFLLEFSDVTEAETNGIIKVIRDPHDKEQANSNNNFHCMVLSLFYCKKKDNSFSQNMRVSIFKMFPYYLFILQH*
Ga0114339_10681543	3300008106	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINHIRYPHHKDQANTNNNFHAMVLAFFYPKEKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114339_10712791	3300008106	Freshwater, Plankton	MTTPKKNFLLEFKDVTEVERKVIINHIRDPHHRDQANTNNNFHAVVLALFYCKRKDQSFSQNMRVSIFQMFLYLLFIHQN*
Ga0114339_10777832	3300008106	Freshwater, Plankton	MTPSKKNFLLEFTDVTEVKAKATINHIRDPHHRDQANTNNNFHAMVLALFYRKKKDNTFNQNMRVSIFQMFLYLLSIHQN*
Ga0114339_10835681	3300008106	Freshwater, Plankton	MATPNKNILLEFSDVTEAETNGIIKLIRDPHDEKLANSNNNFHCMVLSLFYCEKKDHSFSQNKRVSIFQMFPYLLFIHQH*
Ga0114339_10955341	3300008106	Freshwater, Plankton	IHNFTATSKIIMTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHKDQANTNNNFHAVVLAFFYRKKKDDSDSFSQNMRVSIYKMFLHLL*
Ga0114339_11080501	3300008106	Freshwater, Plankton	MATPKKNFLLEFLDVTETEINGIIKLIRDPQDKEQANSNNNFHCVVLSLFYRKKKDNSFSQNMRVSILKCFHIY*
Ga0114339_11233191	3300008106	Freshwater, Plankton	MTTSKKNFLLEFTDVTDIKTKAIINHIRDPEHKDQANTNNNFHAVALALFYCKNKDKSFSTNMRVSILQVFLYLLLIHQN*
Ga0114339_12241262	3300008106	Freshwater, Plankton	MTTAKKNFLLEFTDVTSVETKAIIDHIRDPKHKDQANTNNNFHAVVLALFYRKNKDKSFSQNMRVSILQMFL
Ga0114339_12264761	3300008106	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHKDQANTNNNFHAMVLAFFYCKKKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114339_12508772	3300008106	Freshwater, Plankton	MTTPKKNFLLEFTDLTEAETNGIIKHVRDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQQ*
Ga0114342_10934211	3300008109	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAETNGIIKHVRDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYIYYLFINTNI*
Ga0114345_10581742	3300008112	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAETNGIIKQVRDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH*
Ga0114348_10247592	3300008115	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHEDQANTNNNFHAMVLAFFYHKKKDGSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114348_10378581	3300008115	Freshwater, Plankton	MTTSKKNFLLEFTDVTNIKTKAIIDHIKDPEHKDQANTNNNFHAVVLALFYCKKKDKSFSLNMRVSILQMFLYLLLIHQN*
Ga0114348_10609862	3300008115	Freshwater, Plankton	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHAMVLALFYHKKKDNSFSQNMRVSIFQMFLYLLFIHQH*
Ga0114348_10698593	3300008115	Freshwater, Plankton	MTTLKKNFLLEFTDVTEVKTKAIINHIRDPHHKDQANTNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLLIHQI*
Ga0114348_11381721	3300008115	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINLIRHPHHKDQANTNNNFHAMVLAFFYHKKKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114356_12039072	3300008121	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAETSGIIKHVRDPHDREQANSNNNFHAMVLALFYRKKKDNSFTQNMRVIFFQMFLYLLFIHQH*
Ga0114356_12987494	3300008121	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDETKAIINHIRHPHNKDQTNTNNNFHVMVLAFFYRKKKDDSDSFSQNMRVSIFKMFLYLLLIHHN*
Ga0114356_13222031	3300008121	Freshwater, Plankton	MTTSKKNFLLEFTDVTEVKTKAIINHIRDPHHKDQANTNNNFHAVVLALFYRKKKDNSFSQNMRVSIFQMFLYLLLIHQN*
Ga0114356_14130551	3300008121	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHKDQANTNNNFHTMVLAFFYHKKKDDSDSFSQNLRISIFKMFLYLLLIHQN*
Ga0114359_11174891	3300008122	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAETNGIIKHVRDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH*
Ga0114359_11224661	3300008122	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDETKAIINHIRHPHHKDQANTNNNFHAMVLAFFYRKKKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114359_11283501	3300008122	Freshwater, Plankton	MTPSKKNFLLEFTDVTEVKAKATINHIRDPHHRDQANTNNNFHAMVLALFYRKKKDNSFSQNMRVSIFQMFLYLLLIHQN*
Ga0114359_12451181	3300008122	Freshwater, Plankton	MATQKKNFLLEFSDVTEAETNGIIKLIRDPEDKEQANSNNNFHCVVLSLFYHKKKDNSFSQNIRVSILKCFHIYYLLINTDI*
Ga0114349_10562541	3300008263	Freshwater, Plankton	MATPKKTFLLEFSDVTETETNGIIKLIRNPKDKEQANSDNNFHCVVLLLFYCKKRDNSYSQNMRVSIFKMFPCLLFMTGQVKMTKIAV*
Ga0114349_10625221	3300008263	Freshwater, Plankton	MTTPKKNFLLEFTDLTEAETNGIIKHVSDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH*
Ga0114349_10869911	3300008263	Freshwater, Plankton	MTTLKKNFLLEFTDVTDVKTKAIINHVRDPEHKDQANTNNNFHAMVLAFFYHKRKDENDRFSQNMRVSISKMFLYLLLIHQN*
Ga0114349_11073281	3300008263	Freshwater, Plankton	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHAMVLALFYRKKKDNTFNQNMRVSIFQMFLYLLSIHQN*
Ga0114349_11089121	3300008263	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAETNGIIKHVRDPHDRDQANSNNNFHAMVLALFYCKKKDISFTQNMRVSIFQMFLYLLYIHQHLYLILFFYF*
Ga0114349_11177711	3300008263	Freshwater, Plankton	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHAMVLALFYHKKKDTSFSQNMRVSIFQMFLYLLLIHQN*
Ga0114349_12712312	3300008263	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHKDQANTNNNFHAVVLAFFYRKKKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0114349_12760651	3300008263	Freshwater, Plankton	MTTAKKNFLLEFTDVTNVETKAIIDHIRDPEHKDQANTSNNFHAVMLAFFYRKNKGKSFSQNIRVSILQMFLYLLLIHQN*
Ga0114361_10373904	3300008265	Freshwater, Plankton	MTTPKKNFLLEFTDVTEAETSGIVNHDRDQANSNNNFHAMVLALFYRKKKDNSFSQNMRVSIFQMFLYLLLIHQI*
Ga0114361_11073041	3300008265	Freshwater, Plankton	LEFTDVTEAERNAIIKHVRGPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLLIHQN*
Ga0114357_11508381	3300008966	Freshwater, Plankton	MTTSKKNFLLEFTDVTQDKTKAIINHIRHPHHKDQANTNNNFHAMVLAFFYRKKKDDSDSFSQNMRVSIFKMFLYLLLIHQN*
Ga0102814_103687721	3300009079	Estuarine	MTTSKKNFLLEFTDVTQDETKAIINHIRHPHHKDQANTNNNFHAMVLAFFYCKKKDDSDSFSQNMRVSIFKMFLYLWPVRASI*
Ga0102812_106727661	3300009086	Estuarine	MATPKKNFLLEFSDVTEAETNRIIKLIRDPQGKEQANSNNNFQCVVVLLFYHKKKDNSGSFSQNMRVSIFKFLHIYYLFINTNI*
Ga0211726_104919322	3300020161	Freshwater	MTTPKKNFLLEFTDVTEAETNGIIKHVRDPYDREQTNSNNNFHAVVLALFYRKRKDQSFSQNMRVSIFQMFLYLLFIHQH
Ga0211735_114790841	3300020162	Freshwater	MATPKKNFLLEFTDVTEAETNGIIKHIRDPHHRDQANTNNNFHAVVLALFYCKKKDNSFSQNMRVSIFQKFPCFLFIHQH
Ga0209972_104122451	3300027793	Freshwater Lake	MTTPKKNFLLEFTDLTEAETNGIIKHVRDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQQ
Ga0209985_100520841	3300027806	Freshwater Lake	MTTPKKNFLLEFTDVTEAETNGIIKHVRDPYDREQTNSNNNFHAVVLALFYRKKKDNTFTQNMRVSIFQMFLYLLFIHQH
Ga0209985_101124412	3300027806	Freshwater Lake	MTTPKKNFLLEFTDVTEVKTKAIINHIRDPHHRDQANTNNNFHAVVLALFYRKRKDQSFSQNMRVSIFQMFLYLLIIHQN
Ga0209985_101925071	3300027806	Freshwater Lake	MTTPKKKFLLEFTDVTEAETSGIIKHVRDPHDREQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH
Ga0209985_102291002	3300027806	Freshwater Lake	MATPKKNFLLEFSDVTEAETNGIIKLIRDPHDKEQANVNNNFHCAVLSLFYRKKKDNSFSQNMMVSIFQMFPYLLFIHQH
Ga0209985_102986071	3300027806	Freshwater Lake	MTTANKNFLLEFTDVTNIKTKAIIDHIKDPEHKDQANTNNNFHAVVLALFYCKKKDKSFSLNMRVSILQMFLYL
Ga0209985_102987022	3300027806	Freshwater Lake	MATPNKNILLEFSDVTEAETNGIIKLIRDPHDEELANSNNNFHCMVLSLFYCEKKDHSFSQNKRVSIFQMFPYLLFIHQH
Ga0209985_103583491	3300027806	Freshwater Lake	MTSPKKNFLLEFTDVTEAETNGIIKHVRDPHDRDQANSNNNFHAMVLALFYCKKKDISFTQNMRVSIFQMFLYLLFIHQH
Ga0209985_103804221	3300027806	Freshwater Lake	MTTPKKNFLLEFTDVTDVETKAIVNHIRDPEHKDQANTNNNFHAIVSALFYCKNKDKSFSQNMRVSILQMFLYLLLIHQN
Ga0209985_104066081	3300027806	Freshwater Lake	MATPKKNFLLEFLDVTETEINGIIKLIRDPQDKEQANSNNNFHCVVLSLFYHKKKDNSFSQNMRVSILKCFHIYYLLIHTNI
Ga0209985_104171621	3300027806	Freshwater Lake	MTTPKKNFLLEFTDVTEAERNVIINHVRDPYDKEHANSNNNFHAMVLALFYCKKKDNLFTQNIRVSIFQMFLYLLFIHQH
Ga0209990_100778311	3300027816	Freshwater Lake	MTTAKKNFLLEFTDVTNLETKAIIDHIRDPEHKDQSNTSNNFHAVVLALFYRKKKDDSDSFSQNMRVSILQMFLYLLLIHQN
Ga0209990_101506542	3300027816	Freshwater Lake	KKNFLLEFTDLTEAETNGIIKHVRDPHDKEQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQQ
Ga0209990_102038711	3300027816	Freshwater Lake	PTSKIIMTTPKKNFLLEFTDVTEAETNGIIKHVRDPYDREQTNSNNNFHAVVLALFYRKKKDNTFTQNMRVSIFQMFLYLLFIHQH
Ga0209990_102256652	3300027816	Freshwater Lake	MATPNKNILLEFSDVTEAETNGIIKLIRDPHDEELANSNNNFHCMVLSLFYCEKKDHSFSQNKRVSIFQMFPYLFFIHQH
Ga0209990_102265823	3300027816	Freshwater Lake	MTTSKKNFLLEFTDVTQDETKAIINHKRHPHHKDQANTNNNFHAMVLAFFYHKKKDGSDSFSQNMRVSIFKMFLYLLLIHQN
Ga0209990_103369241	3300027816	Freshwater Lake	MTTSKKNFLLEFTDVTEVETKAIINHIRDPHHRDQANTNNNFHSVVLALFYRKKKDNSFSQNMRVSIFQMFLYLLLIHQN
Ga0209990_104483361	3300027816	Freshwater Lake	KKKFLLEFTDVTEAETSGIIKHVRDPHDREQANSNNNFHAMVLALFCHKKKDNSFIQNMRVSIFQMFLDLLFIHQH
Ga0209990_104885251	3300027816	Freshwater Lake	MTTSKKNFLLEFTDVTEAETSGIVNHDRDQANSNNNFHAMVLALFYRKKKDNSFTQNMRVSIFQMFLYLLFIHQH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences