Metagenome / Metatranscriptome Family F082064

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082064
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	97 residues
Representative Sequence	MQYTWEFPQFIVNPTSDGLTNVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYADITQEMAYQWVAGCISMPGVEAQIASQINLLSETTSQTQQPPF
Number of Associated Samples	74
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.72 %
% of genes near scaffold ends (potentially truncated)	43.36 %
% of genes from short scaffolds (< 2000 bps)	72.57 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.097 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (52.212 % of family members)
Environment Ontology (ENVO)	Unclassified (87.611 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.611 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.62% β-sheet: 30.00% Coil/Unstructured: 45.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.51.4.2: Maf-like	d2amha1	2amh	0.57201
d.33.1.2: SP1558-like	d2hnga1	2hng	0.55985
f.58.1.1: MetI-like	d3tuia_	3tui	0.55691
d.54.1.1: Enolase N-terminal domain-like	d1kkoa2	1kko	0.54224
e.43.1.2: Capz beta-1 subunit	d3aa7b_	3aa7	0.54162

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF09374	PG_binding_3	7.08
PF05838	Glyco_hydro_108	3.54
PF13759	2OG-FeII_Oxy_5	3.54
PF13884	Peptidase_S74	2.65
PF07460	NUMOD3	0.88
PF02945	Endonuclease_7	0.88
PF11351	GTA_holin_3TM	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3926	Lysozyme family protein	General function prediction only [R]	3.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
All Organisms	root	All Organisms	46.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
cellular organisms	root	All Organisms → cellular organisms	28.32 %
Viruses	superkingdom	All Organisms → Viruses	18.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.32 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.12 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	16.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	16.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16.81 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	7.08 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	3.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	13.27 %
unclassified Thiotrichales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales	7.08 %
unclassified Methylococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales	3.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.65 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13.27 %
Thiotrichales bacterium SG8_50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	7.08 %
Methylococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	3.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.65 %
Quisquiliibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium	1.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13.27 %
Thiotrichales bacterium SG8_50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	7.08 %
Methylococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	3.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.65 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	1.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000439\|TBL_comb48_EPIDRAFT_1011252	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4787	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10044833	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2787	Open in IMG/M
3300002091\|JGI24028J26656_1004167	Not Available	2314	Open in IMG/M
3300002092\|JGI24218J26658_1006270	Not Available	2306	Open in IMG/M
3300002092\|JGI24218J26658_1026884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	731	Open in IMG/M
3300002098\|JGI24219J26650_1006448	Not Available	2274	Open in IMG/M
3300003375\|JGI26470J50227_1001678	Not Available	7644	Open in IMG/M
3300003375\|JGI26470J50227_1001912	All Organisms → cellular organisms → Bacteria → Proteobacteria	7023	Open in IMG/M
3300003375\|JGI26470J50227_1007361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2918	Open in IMG/M
3300003375\|JGI26470J50227_1015066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1817	Open in IMG/M
3300003375\|JGI26470J50227_1035170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	965	Open in IMG/M
3300003375\|JGI26470J50227_1042478	Not Available	834	Open in IMG/M
3300003375\|JGI26470J50227_1080708	Not Available	502	Open in IMG/M
3300003785\|Ga0007851_107365	Not Available	562	Open in IMG/M
3300003820\|Ga0007863_1000274	Not Available	7840	Open in IMG/M
3300003852\|Ga0031655_10171124	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	836	Open in IMG/M
3300003852\|Ga0031655_10172131	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300003852\|Ga0031655_10391871	Not Available	516	Open in IMG/M
3300004685\|Ga0065177_1004428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	2566	Open in IMG/M
3300004689\|Ga0065172_1005146	Not Available	797	Open in IMG/M
3300004692\|Ga0065171_1009880	Not Available	1519	Open in IMG/M
3300004694\|Ga0065170_1014438	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300004694\|Ga0065170_1031092	Not Available	714	Open in IMG/M
3300004774\|Ga0007794_10109176	Not Available	825	Open in IMG/M
3300004804\|Ga0007796_10041210	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1554	Open in IMG/M
3300004807\|Ga0007809_10012343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3096	Open in IMG/M
3300004807\|Ga0007809_10023142	Not Available	2164	Open in IMG/M
3300004807\|Ga0007809_10026844	All Organisms → cellular organisms → Bacteria → Proteobacteria	1982	Open in IMG/M
3300004807\|Ga0007809_10032364	Not Available	1773	Open in IMG/M
3300006106\|Ga0007833_1081225	Not Available	579	Open in IMG/M
3300006108\|Ga0007862_1019885	Not Available	1497	Open in IMG/M
3300006108\|Ga0007862_1079112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300006115\|Ga0007816_1015787	All Organisms → cellular organisms → Bacteria → Proteobacteria	1780	Open in IMG/M
3300006118\|Ga0007859_1011012	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300006118\|Ga0007859_1103182	Not Available	567	Open in IMG/M
3300006119\|Ga0007866_1049061	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300006122\|Ga0007837_1009061	Not Available	1670	Open in IMG/M
3300006128\|Ga0007828_1061160	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300006129\|Ga0007834_1025654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300006129\|Ga0007834_1065522	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300009151\|Ga0114962_10088584	Not Available	1948	Open in IMG/M
3300009151\|Ga0114962_10320952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	858	Open in IMG/M
3300009151\|Ga0114962_10362222	Not Available	793	Open in IMG/M
3300010158\|Ga0114960_10251156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	903	Open in IMG/M
3300010885\|Ga0133913_10207187	All Organisms → cellular organisms → Bacteria → Proteobacteria	5225	Open in IMG/M
3300010885\|Ga0133913_12951525	Not Available	1137	Open in IMG/M
3300012006\|Ga0119955_1029778	Not Available	1821	Open in IMG/M
3300012694\|Ga0157559_1032901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	887	Open in IMG/M
3300012698\|Ga0157570_1055000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	571	Open in IMG/M
3300012749\|Ga0157566_1117113	Not Available	547	Open in IMG/M
3300013093\|Ga0164296_1053297	Not Available	1924	Open in IMG/M
3300013094\|Ga0164297_10125147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1054	Open in IMG/M
3300016688\|Ga0180039_1102753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1231	Open in IMG/M
3300020686\|Ga0214194_106765	Not Available	1060	Open in IMG/M
3300020688\|Ga0214239_105475	Not Available	1397	Open in IMG/M
3300020710\|Ga0214198_1001973	Not Available	3256	Open in IMG/M
3300020710\|Ga0214198_1019266	Not Available	855	Open in IMG/M
3300020710\|Ga0214198_1042454	Not Available	541	Open in IMG/M
3300020711\|Ga0214237_1003225	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2820	Open in IMG/M
3300020722\|Ga0214245_1033681	Not Available	721	Open in IMG/M
3300020727\|Ga0214246_1045879	Not Available	660	Open in IMG/M
3300021125\|Ga0214211_1004973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1450	Open in IMG/M
3300021127\|Ga0214193_1014796	Not Available	1004	Open in IMG/M
3300021131\|Ga0214206_1000739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8422	Open in IMG/M
3300021131\|Ga0214206_1011990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1201	Open in IMG/M
3300021138\|Ga0214164_1016823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2205	Open in IMG/M
3300021138\|Ga0214164_1094848	Not Available	569	Open in IMG/M
3300021142\|Ga0214192_1065411	Not Available	1076	Open in IMG/M
3300021354\|Ga0194047_10352540	Not Available	556	Open in IMG/M
3300023184\|Ga0214919_10291970	Not Available	1132	Open in IMG/M
3300025339\|Ga0208502_1002018	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1808	Open in IMG/M
3300025353\|Ga0208255_101421	All Organisms → cellular organisms → Bacteria → Proteobacteria	2764	Open in IMG/M
3300025366\|Ga0208505_1012698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	1206	Open in IMG/M
3300025372\|Ga0207957_1021347	Not Available	777	Open in IMG/M
3300025388\|Ga0208503_1002662	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2612	Open in IMG/M
3300025392\|Ga0208380_1028602	Not Available	882	Open in IMG/M
3300025396\|Ga0208874_1035495	Not Available	739	Open in IMG/M
3300025402\|Ga0208876_1038038	Not Available	758	Open in IMG/M
3300025418\|Ga0208253_1066298	Not Available	581	Open in IMG/M
3300025421\|Ga0207958_1053409	Not Available	582	Open in IMG/M
3300025421\|Ga0207958_1064980	Not Available	509	Open in IMG/M
3300025424\|Ga0208617_1006501	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2724	Open in IMG/M
3300025429\|Ga0208500_1045491	Not Available	516	Open in IMG/M
3300025430\|Ga0208622_1084549	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522	Open in IMG/M
3300025455\|Ga0208376_1100697	Not Available	535	Open in IMG/M
3300025578\|Ga0208864_1052896	Not Available	1056	Open in IMG/M
3300025598\|Ga0208379_1014711	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2287	Open in IMG/M
3300025598\|Ga0208379_1019603	Not Available	1925	Open in IMG/M
3300025598\|Ga0208379_1020134	Not Available	1895	Open in IMG/M
3300025598\|Ga0208379_1023800	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1712	Open in IMG/M
3300025598\|Ga0208379_1032646	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1417	Open in IMG/M
3300025598\|Ga0208379_1041681	Not Available	1221	Open in IMG/M
3300025598\|Ga0208379_1046342	All Organisms → Viruses → Predicted Viral	1142	Open in IMG/M
3300025598\|Ga0208379_1072167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	859	Open in IMG/M
3300025598\|Ga0208379_1088986	Not Available	748	Open in IMG/M
3300025598\|Ga0208379_1161959	Not Available	500	Open in IMG/M
3300025838\|Ga0208872_1001823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12725	Open in IMG/M
3300027708\|Ga0209188_1035499	Not Available	2340	Open in IMG/M
3300027741\|Ga0209085_1002920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9509	Open in IMG/M
3300027749\|Ga0209084_1212884	Not Available	771	Open in IMG/M
3300027896\|Ga0209777_10123620	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2169	Open in IMG/M
3300027896\|Ga0209777_10243926	Not Available	1417	Open in IMG/M
3300027896\|Ga0209777_10310761	Not Available	1215	Open in IMG/M
3300027896\|Ga0209777_10317425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1198	Open in IMG/M
3300027896\|Ga0209777_10401631	All Organisms → Viruses → Predicted Viral	1031	Open in IMG/M
3300027896\|Ga0209777_10568645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	825	Open in IMG/M
3300028392\|Ga0304729_1006374	Not Available	6015	Open in IMG/M
3300032117\|Ga0316218_1067613	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1470	Open in IMG/M
3300032561\|Ga0316222_1133568	Not Available	944	Open in IMG/M
3300032562\|Ga0316226_1036072	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300032665\|Ga0316221_1030704	All Organisms → cellular organisms → Bacteria → Proteobacteria	2387	Open in IMG/M
3300032677\|Ga0316227_1008387	Not Available	6308	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	83.19%
Lake	Environmental → Aquatic → Freshwater → Lake	16.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	55.75%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	16.81%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	10.62%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	8.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	7.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	52.21%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	10.62%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	8.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	7.96%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.19%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	3.54%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003785	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004689	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300006129	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012694	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES054 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012698	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES071 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012749	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES066 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300016688	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES053 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020688	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020711	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 hypolimnion	Environmental	Open in IMG/M
3300020722	Freshwater microbial communities from Trout Bog Lake, WI - 23OCT2008 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300021125	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025366	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025388	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025396	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025421	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025424	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025430	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025455	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M (SPAdes)	Environmental	Open in IMG/M
3300025578	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025838	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032561	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TBL_comb48_EPIDRAFT_10112527	3300000439	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQEMAYAWVSQCISMPGVEAQIASQINLLGETTSQTQQPPF*
TBL_comb47_HYPODRAFT_100448333	3300000553	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQTRQPPF*
JGI24028J26656_10041674	3300002091	Lentic	MXYKWSFPQFIVNPVSDGLPNVVTAINWVCSGTDGFISSSXSGTVQLGTPNPAQFTPYGDITQDMAYRWVAESISMNGVQDQIADQIRQLSKPTMLTQKPPF*
JGI24218J26658_10062704	3300002092	Lentic	MXYKWSFPQFIVNPVSDGLPNVVTAINWVCSGTDGFISSSNSGTVQLGTPNPAQFTPYGDITQDMAYRWVAESISMNGVQDQIADQIRQLSKPTMLTQKPPF*
JGI24218J26658_10268843	3300002092	Lentic	MQFTWTFPQFIVNPSSDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISVTGVEAAIAAQINQISTPQVQPQNPPF*
JGI24219J26650_10064484	3300002098	Lentic	MQYKWSFPQFIVNPVSDGLPNVVTAINWVCSGTDGFISSSSSGTVQLGTPNPAQFTPYGDITQDMAYRWVAESISMNGVQDQIADQIRQLSKPTMLTQKPPF*
JGI26470J50227_100131612	3300003375	Freshwater	VVTAINWVCTGTNGSVTSSASGTANLGSPNPAEFVPYADITQQMAYTWVSQCISMPGFEAQVGAQISALSQPVTQSQAPPFL*
JGI26470J50227_100167813	3300003375	Freshwater	VVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMPGVEELIAVQIGQLTKPISQSQTPPF*
JGI26470J50227_10019122	3300003375	Freshwater	MQYNWEFPQFIVAPISDGLPNVVTAINWVCTGTNGAVTSSASGTIKLGSPNPAEFVPYADITQEMAYTWVAGRISMSGVENQIAQQINALSNPPIQPQSPPFWAGD*
JGI26470J50227_10073615	3300003375	Freshwater	MQFIWSFPQFIVNPSYDGLQNVVTGINWVCTGSDGTYTSSASGTVILGSPNPAEFVPYADITQAMAYQWVAQSISMAGVESGISQQISVLSQPVIQT
JGI26470J50227_10150663	3300003375	Freshwater	MWFTWEFPQFIVTPYYDGLTNVVTAINWVCTGSNGTYTASNSGTAQLGTPNPAEFVPYADITQAMAYAWVSQTISMPAVEAQIAAQINQLSQPITQSQAPPF*
JGI26470J50227_10351701	3300003375	Freshwater	TGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQDMAFQWVSQNISTTGVEAGIAAQINQLSQPQLQPQNPPF*
JGI26470J50227_10424782	3300003375	Freshwater	MQFQWNFPQFIVTPYVDGLTNVVTAINWICTGSGNGITASNSGTVKLGMPNPAEFIPYADITQDMAYIWVSQNISMPGVEKAIAQQIENLSQPVAQSQSPPFS*
JGI26470J50227_10807081	3300003375	Freshwater	MITYAWSFPQFIVNPSSDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQNPPF*
Ga0007851_1073651	3300003785	Freshwater	MITFSWSFPQFIVNPISDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGSPNPAEFIPYSDITQGMAFQWVSQSISTTGVEAAIAAQIAQISKPQIQPQKPPF*
Ga0007863_10002749	3300003820	Freshwater	VVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMXGVEELIAVQIGQLTKPISQSQTPPF*
Ga0031655_101711242	3300003852	Freshwater Lake Sediment	SYLGIHLMQFTWTFPQFIVNPQYDGLQNVVTGINWVCTGSNGASTSSASGTVQLGTPNPAEFVPYADITQAMAYAWVAQSISMAGVESQIAAQINQLSQPVTQSQAPPF*
Ga0031655_101721311	3300003852	Freshwater Lake Sediment	QFIVNPYYDGLTNVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYADITQQMAYMWVSQCISMPGVEAQVGAQISALSQPVTQTQAPPFS*
Ga0031655_103918712	3300003852	Freshwater Lake Sediment	IVNPQYDGLQNVVTGINWVCTGSNGASTSSASGTVMLGTPNPAEFVPYADITQAMAYAWVAQSISMTGVESGISQQISVLSQPVIQTQSPPFN*
Ga0065177_10044283	3300004685	Freshwater	MTDFTWTFPQFIVSPTSDGLPNVVTAINWVCTGTNGSISSSASGTVQLGAPNPAEYIPYADITYAMAFAWVDQSINMRAVESGITSQLSQLTQPVVQTQAPPF*
Ga0065172_10051461	3300004689	Freshwater	MNFAWSFPQFIVNPLSNGLPNVVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMLGVEELIAVQIGQLTKPISQSQTPPF*
Ga0065171_10098802	3300004692	Freshwater	MQYTWEFPQFVVNPSSDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQKPPF*
Ga0065170_10144382	3300004694	Freshwater	MQYKWSFPQFIVNPLSDGLPNVVTAINWVCSGTDGFVSSSSSGTVKLGTPNPAQFIAYADITQDMAYRWVAESISMNGVQDQIAAQIKQLSQPVMLTQKPPF*
Ga0065170_10310921	3300004694	Freshwater	MQYTWEFPQFVVNPSSDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQIST
Ga0007794_101091761	3300004774	Freshwater	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGINTSSASGTANLGLPNPAEFVPYANITQQMAYAWVSQCISMPGVEKQIAYQIDLLTQSTPQTQQPPF*
Ga0007796_100412102	3300004804	Freshwater	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYAWVSGCISMPGVEAQIASQINLLSQTTSQTQNPPF*
Ga0007809_100123436	3300004807	Freshwater	MNFKWSFPQFIVSPYSDGLTNVVTAINWVCTGTNGIITSSSSGTAKLGSPNPAEFIPYADITQEMAYMWVAGCISMPGVESQIAQQITALSNPPTQPQNPPFWAGD*
Ga0007809_100231423	3300004807	Freshwater	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQYISMPSVEKQIAYQIDLLSQSTPQTQQPPF*
Ga0007809_100268444	3300004807	Freshwater	MQYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTSGTYTSSSSGTAKLGTPNPAEFTPYAEITQEMAYAWVSQCISMQGVESGIAAQIEHLSQPLIQTQNPPF*
Ga0007809_100323641	3300004807	Freshwater	MQYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQ
Ga0007833_10812251	3300006106	Freshwater	NVVTAINWVCTGTNGTVTSSASGTAKLGSPNPAEFIPYADITQEMAYMWVAGCISMPGVESQIAQQITALSNPPTQPQNPPFWAGD*
Ga0007862_10198854	3300006108	Freshwater	IVSPYSDGLTNVVTAINWVCTGTNGIITSSSSGTAKLGSPNPAEFIPYADITQEMAYMWVAGCISMPGVESQIAQQITALSNPPTQPQNPPFWAGD*
Ga0007862_10791121	3300006108	Freshwater	MQYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTSGTYTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQ
Ga0007816_10157875	3300006115	Freshwater	NVVTAINWVCTGTDGTVTSSASGTANLGSPNPAEFVPYADITQEMAYQWVAGCISMPGVEAQIASQINLLSETTSQTQQPPF*
Ga0007859_10110124	3300006118	Freshwater	VNPLYDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQKPPF*
Ga0007859_11031821	3300006118	Freshwater	RNLHHMNFAWEFPQFVVSPIYDGLPNVVTAINWVCTGTNGTVTSSASGTAKLGSPNPAEFIPYADITQEMAYMWVAGCISMPGVESQIAQQITALSNPPTQPQNPPFWAGD*
Ga0007866_10490612	3300006119	Freshwater	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPSVEKQIAYQIDLLSQSTPQTQQPPF*
Ga0007837_10090611	3300006122	Freshwater	MQYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQTQQPPF*
Ga0007828_10611601	3300006128	Freshwater	PQFIVNPYYDGLTNVVTAINWVCTGTNGTYTSSSSGTAKLGTPNPAEFVPYADITQAMAYNWVSQCISMPAVESQIAAQINQLSQPVTQSQAPPF*
Ga0007834_10256543	3300006129	Freshwater	MQFTWTYPQFIVKPQEGTLQNVVVGINWVCTGTDGTNTSSASGTVKLGSPNPAEFIPYQDITQEMAASWVASLISVPGVEAQIA
Ga0007834_10655223	3300006129	Freshwater	TNVVTAINWVCTGTNGLVTSSSSGTVQLGSPNPAEFIPYSDITQGMAFQWVSQSISTTGVEAAIAAQIAQISKPQIQPQKPPF*
Ga0114962_100885844	3300009151	Freshwater Lake	MKFTWEFPQFIVSPDYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYSWVSGCISMPGVEAQIASQINLLNQTTAQTQNPPF*
Ga0114962_103209521	3300009151	Freshwater Lake	WEFPQFIVNPSVDGLTDVVTAINWVCTGTNGLVTSSSSGTVQLGSPNPAEFVPYADITQAMAYQWVSQSISMPGVEAGIANQINQISTPQVQPQNPPF*
Ga0114962_103622222	3300009151	Freshwater Lake	MKFAWSFPQFVVNPSLDGLTNVVTAINWVCTGTNGNFTSSASGTANLGTPNPAEFIPYADITQQMAYAWVSGCISMPGVEAQIASQINLLGETTSQTQQPPF*
Ga0114960_102511561	3300010158	Freshwater Lake	NWICTGTDGLVTSSSSGTVQLGSPNPAEFVPYDQITQEMAFNWVSQSISVSGVESAIAAQIKQISAPQLQPQNPPF*
Ga0133913_102071876	3300010885	Freshwater Lake	MQYTWEFPQFIVNPSVDGLTDVVTAINWVCTGTNGLVTSSSSGTVQLGSPNPAEFVPYADITQAMAYQWVSQSISMPGVEAGIANQINQISTPQVQPQNPPF*
Ga0133913_129515252	3300010885	Freshwater Lake	MKFTWEFPQFIVSPDYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYAWVSGCISMPGVEAQIASQINLLNQTTAQTQNPPF*
Ga0119955_10297783	3300012006	Freshwater	MKFTWEFPQFVVNPASDGLTNVVTAINWVCTGTNGNFTSSASGTANLGTPNPAEFIPYADITQQMAYAWVSGCISMPGVEAQIASQINLLGETTSQTQQPPF*
Ga0157559_10329011	3300012694	Freshwater	NWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQNPPF*
Ga0157570_10550001	3300012698	Freshwater	SSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQNPPF*
Ga0157566_11171133	3300012749	Freshwater	INWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQNPPF*
Ga0164296_10532974	3300013093	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVNAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQEMAYAWVSQCISMPGVEAQIASQINLLGETTPQTQQPPF*
Ga0164297_101251472	3300013094	Freshwater	MNFTWTFPQFIVNPTSDGLTNVVTAINWVCTGSGNGITASNSGTVKLGMPNPAEFIPYADITQEMAYAWVSDCISMPAVETGIATQIAQLSQPVSQTQAPPF*
Ga0180039_11027533	3300016688	Freshwater	LTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQNPPF
Ga0214194_1067652	3300020686	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQEMAYAWVSQCISMPGVEAQIASQINLLGETTSQTQQPPF
Ga0214239_1054753	3300020688	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQEMAYAWVSQCISMPGVEAQIASQINLLGETTSQTQQP
Ga0214198_10019732	3300020710	Freshwater	MQYTWEFPQFIVNPTSDGLTNVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYADITQEMAYQWVAGCISMPGVEAQIASQINLLSETTSQTQQPPF
Ga0214198_10192662	3300020710	Freshwater	MQYNWEFPQFIVAPISDGLPNVVTAINWVCTGTNGAVTSSASGTIKLGSPNPAEFVPYADITQEMAYTWVAGRISMSGVENQIAQQINALSNPPIQPQSPPFWAGD
Ga0214198_10424542	3300020710	Freshwater	TWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQEMAYAWVSQCISMPGVEAQIASQINLLGETTPQTQQPPF
Ga0214237_10032253	3300020711	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQTRQPPF
Ga0214245_10336812	3300020722	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQEMAYAWVSQCISMPGVEAQIASQINLLGETTSQTRQPPF
Ga0214246_10458791	3300020727	Freshwater	RHDPHLGIHLMQYTWEFPQFIVNPTSDGLTNVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYADITQEMAYQWVAGCISMPGVEAQIASQINLLSETTSQTQQPPF
Ga0214211_10049731	3300021125	Freshwater	GLVTSSSSGTVQLGSPNPAEFVPYDQITQEMAFNWVSQSISVSGVESAIAAQIKQISAPQLQPQNPPF
Ga0214193_10147961	3300021127	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINL
Ga0214206_10007396	3300021131	Freshwater	MHYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTNGSVTSSASGTANLGSPNPAEFVPYADITQEMAYQWVAGCISMPGVEAQIASQINLLSETTSQTQQPPF
Ga0214206_10119903	3300021131	Freshwater	HLMQYTWEFPQFIVNPSVDGLTDVVTAINWVCTGTNGLVTSSSSGTVQLGSPNPAEFVPYADITQAMAYQWVSQSISMPGVEAGIANQINQISTPQVQPQNPPF
Ga0214164_10168231	3300021138	Freshwater	MQFTWTFPQFIVNPYYDGLTNVVTAINWVCTGTNGTITSSTSGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQTQQPPF
Ga0214164_10948482	3300021138	Freshwater	WEFPQFIVAPISDGLPNVVTAINWVCTGTNGAVTSSASGTIKLGSPNPAEFVPYADITQEMAYTWVAGRISMSGVENQIAQQINALSNPPIQPQSPPFWAGD
Ga0214192_10654112	3300021142	Freshwater	MQFTWSFPQFIVNPLSDSLPNVVTAINWVCTGTNGSITSSSSGTANLGQPNPAEFVPYNDITQSLAAQWVSQCISMSGVEELIAMQIGQLTKPISQSQTPPF
Ga0194047_103525401	3300021354	Anoxic Zone Freshwater	NGIHLMSYTWTFPQFVVDPYYDGLTNVVTAINWVCTGTNGIITSSASGTAQLGSPNPAEFVPYADITYNMAYEWVSQCISMPGVEAQIASQINLLSQTTSQTQQPPF
Ga0214919_102919703	3300023184	Freshwater	MKFTWEFPQFVVNPASDGLTNVVTAINWVCTGTNGNFTSSASGTANLGTPNPAEFIPYADITQQMAYAWVSGCISMPGVEAQIASQINLLGETTSQTQQPPF
Ga0208502_10020183	3300025339	Freshwater	VVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMPGVEELIAVQIGQLTKPISQSQTPPF
Ga0208255_1014215	3300025353	Freshwater	MITFSWSFPQFIVNPISDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGSPNPAEFIPYSDITQGMAFQWVSQSISTTGVEAAIAAQIAQISKPQIQPQKPPF
Ga0208505_10126983	3300025366	Freshwater	MTDFTWTFPQFIVSPTSDGLPNVVTAINWVCTGTNGSISSSASGTVQLGAPNPAEYIPYADITYAMAFAWVDQSINMRAVESGITSQLSQLTQPVVQTQAPPF
Ga0207957_10213471	3300025372	Freshwater	MQYTWEFPQFVVNPSSDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQIS
Ga0208503_10026624	3300025388	Freshwater	VVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMLGVEELIAVQIGQLTKPISQSQTPPF
Ga0208380_10286022	3300025392	Freshwater	MQYTWEFPQFVVNPSSDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQKPPF
Ga0208874_10354951	3300025396	Freshwater	SFPQFIVASVYDGLPNVVTAINWVCTGTNGTVTSSASGTAKLGSPNPAEFVPYADITQEMAYMWVAGCISMPGVENQIAQQINALSNPPIQPQNPPFWAGD
Ga0208876_10380381	3300025402	Freshwater	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQTQQPPF
Ga0208253_10662982	3300025418	Freshwater	MQFTWSFPQFIVASVYDGLPNVVTAINWVCTGTNGTVTSSASGTAKLGSPNPAEFVPYADITQEMAYMWVAGCISMPGVENQIAQQINALSNPPIQPQN
Ga0207958_10534091	3300025421	Freshwater	WVRNLHHMNFAWEFPQFVVSPIYDGLPNVVTAINWVCTGTNGTVTSSASGTAKLGSPNPAEFIPYADITQEMAYMWVAGCISMPGVESQIAQQITALSNPPTQPQNPPFWAGD
Ga0207958_10649802	3300025421	Freshwater	GRIGRVCLMQYTWEFPQFVVNPSSDGLTNVVTAINWVCTGTNGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAAIAAQINQISTPQVQPQKPPF
Ga0208617_10065014	3300025424	Freshwater	VVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAEQWVSQCISMLGVEELIAVQIGQLTKPISQSQTPPF
Ga0208500_10454911	3300025429	Freshwater	WWDRLSRCYPHNGIHLMSYTWTFPQFVVDPYYDGLTNVVTAINWVCTGTNGIITSSSSGTAKLGSPNPAEFIPYADITQEMAYMWVAGCISMPGVESQIAQQITALSNPPTQPQNPPFWAGD
Ga0208622_10845491	3300025430	Freshwater	FPQFIVNPYYDGLTNVVTAINWVCTGTNGTYTSSSSGTAKLGTPNPAEFVPYADITQAMAYNWVSQCISMPAVESQIAAQINQLSQPVTQSQAPPF
Ga0208376_11006971	3300025455	Freshwater	YIYRSGWISGICVMKFTWEFPQFVVNPASDGLTNVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYAWVSGCISMPGVEAQIASQINLLSQTTSQTQNPPF
Ga0208864_10528962	3300025578	Freshwater	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYAWVSGCISMPGVEAQIASQINLLSQTTSQTQNPPF
Ga0208379_10147116	3300025598	Freshwater	MNFKWSFPQFIVSPYSDGLTNVVTAINWVCTGTNGIITSSSSGTAKLGSPNPAEFIPYADITQEMAYMWVAGCISMPGVESQIAQQITAL
Ga0208379_10196032	3300025598	Freshwater	MQYKWSFPQFIVNPLSDGLPNVVTAINWVCSGTDGFVSSSSSGTVKLGTPNPAQFIAYADITQDMAYRWVAESISMNGVQDQIAAQIKQLSQPVMLTQKPPF
Ga0208379_10201344	3300025598	Freshwater	MQYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTNGTVTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQCISMPGVEAQIASQINLLGETTSQTQQPPF
Ga0208379_10238003	3300025598	Freshwater	MQYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTSGTYTSSSSGTAKLGTPNPAEFTPYAEITQEMAYAWVSQCISMQGVESGIAAQIEHLSQPLIQTQNPPF
Ga0208379_10326464	3300025598	Freshwater	MSYTWTFPQFVVDPYYDGLTNVVTAINWVCTGTNGIITSSASGTAQLGSPNPAEFVPYADITYNMAYEWVSQCISMPGVEAQIASQINLLSQTTSQTQQPPF
Ga0208379_10416812	3300025598	Freshwater	MNFAWSFPQFIVNPLSNGLPNVVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMLGVEELIAVQIGQLTKPISQSQTPPF
Ga0208379_10463422	3300025598	Freshwater	MQYTWEFPQFIVNPSSDGLTNVVTAINWVCTGTSGTYTSSASGTANLGSPNPAEFVPYANITQQMAYQWVAGCISMPGVEAQIASQINLLSETTSQTQQPPF
Ga0208379_10721671	3300025598	Freshwater	QAICTGTDGLVTSSSSGTVQLGSPNPAEFVPYDQITQEMAFNWVSQSISVSGVESAIAAQIKQISAPQLQPQNPPF
Ga0208379_10889862	3300025598	Freshwater	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYANITQQMAYAWVSQYISMPSVEKQIAYQIDLLSQSTPQTQQPPF
Ga0208379_11619591	3300025598	Freshwater	PRRNSHLGIHLMQFAWSFPQFIVSPEYDGLADVVTAINWVCTGTNGVNTSSASGTANLGSPNPAEFVPYAKITQEMAYAWVSSCISMPGVEKQIAYQINLLSQSTSQTQQPPF
Ga0208872_10018232	3300025838	Freshwater	MQFTWTFPQFIVNPTSDGLTNVVTAINWVCTGTNGTYTSSMSGTVQLGSPNPAEFVPYADITQAMAYAWVAQSISIIGVENQIAMQVTELSKPVIQTQAPPY
Ga0209188_10354992	3300027708	Freshwater Lake	MKFAWSFPQFVVNPSLDGLTNVVTAINWVCTGTNGNFTSSASGTANLGTPNPAEFIPYADITQQMAYAWVSGCISMPGVEAQIASQINLLGETTSQTQQPPF
Ga0209085_100292011	3300027741	Freshwater Lake	MKFTWEFPQFIVSPDYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYAWVSGCISMPGVEAQIASQINLLNQTTAQTQNPPF
Ga0209084_12128843	3300027749	Freshwater Lake	MKFTWEFPQFIVSPEYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYAWVSGCISMPGVEAQIASQINLLNQTTAQTQNPPF
Ga0209777_101236205	3300027896	Freshwater Lake Sediment	MWFTWEFPQFIVTPYYDGLTNVVTAINWVCTGSNGTYTASNSGTAQLGTPNPAEFVPYADITQAMAYAWVSQTISMPAVEAQIAAQINQLSQPITQSQAPPF
Ga0209777_102439262	3300027896	Freshwater Lake Sediment	MQFTWTFPQFIVNPQYDGLQNVVTGINWVCTGSNGTYTSSASGTVQLGTPNPAEFVPYADITQAMAYAWVAQSISMTGVEAQIAAQINQLSQPVIQTQAPPY
Ga0209777_103107612	3300027896	Freshwater Lake Sediment	MQFSWSFPQFIVNPLYDGLTNVVTAINWICTGTNGSVTSSASGTANLGSPNPAEFVPYADITQQMAYTWVSQCISMPGVEAQVGAQISALSQPVTQTQAPPFS
Ga0209777_103174251	3300027896	Freshwater Lake Sediment	INWVCTGTDGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQSISITGVEAGIAAQINQLSQPQVQPQNPPF
Ga0209777_104016312	3300027896	Freshwater Lake Sediment	MQFTWTFPQFIVNPQYDGLQNVVTGINWVCTGSNGASTSSASGTVQLGTPNPAEFVPYADITQAMAYAWVAQSISMAGVESQIAAQINQLSQPVTQSQAPPF
Ga0209777_105686451	3300027896	Freshwater Lake Sediment	NGLVTSSSSGTVQLGTPNPAEFVPYADITQEMAFQWVSQFISITGVEAAIAAQINQISTPQVQPQKPPF
Ga0304729_10063744	3300028392	Freshwater Lake	MKFTWEFPQFIVSPDYDGLANVVTAINWVCTGTNGINTSSASGTANLGSPNPAEFVPYASITQQMAYSWVSGCISMPGVEAQIASQINLLNQTTAQTQNPPF
Ga0316218_10676131	3300032117	Freshwater	SVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMPGVEELIAVQIGQLTKPISQSQTPPF
Ga0316222_11335683	3300032561	Freshwater	MNFAWSFPQFIVNPLSNGLPNVVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMPSVEELIAVQIG
Ga0316226_10360722	3300032562	Freshwater	VVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMPSVEELIAVQIGQLTKPISQSQTPPF
Ga0316221_10307046	3300032665	Freshwater	VTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVPYDDITQSLAAQWVSQCISMPGVEELIAVQIGQLTKPISQSQTPPF
Ga0316227_100838712	3300032677	Freshwater	TAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMPSVEELIAVQIGQLTKPISQSQTPPF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082064

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences