Metagenome / Metatranscriptome Family F081806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	98 residues
Representative Sequence	VRAVVMVLRMRFRQYWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGKPLPQLSRLPHVTSVTPAVVTYNGAVGCASC
Number of Associated Samples	102
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.07 %
% of genes near scaffold ends (potentially truncated)	98.25 %
% of genes from short scaffolds (< 2000 bps)	94.74 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.070 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.790 % of family members)
Environment Ontology (ENVO)	Unclassified (39.474 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.018 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.08% β-sheet: 0.00% Coil/Unstructured: 54.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF08223	PaaX_C	42.98
PF13474	SnoaL_3	2.63
PF02585	PIG-L	0.88
PF00535	Glycos_transf_2	0.88
PF14200	RicinB_lectin_2	0.88
PF04299	FMN_bind_2	0.88
PF04087	DUF389	0.88
PF13193	AMP-binding_C	0.88
PF14062	DUF4253	0.88
PF04138	GtrA	0.88
PF05719	GPP34	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	42.98
COG1808	Uncharacterized membrane protein AF0785, contains DUF389 domain	Function unknown [S]	0.88
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.07 %
Unclassified	root	N/A	21.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.07 %
Unclassified	root	N/A	21.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.07 %
Unclassified	root	N/A	21.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	74.56 %
Unclassified	root	N/A	21.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.68 %
Unclassified	root	N/A	21.93 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	64.04 %
Unclassified	root	N/A	21.93 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	6.14 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	50.88 %
Unclassified	root	N/A	21.93 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	6.14 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	0.88 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	50.88 %
Unclassified	root	N/A	21.93 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	6.14 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.88 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	50.88 %
Unclassified	root	N/A	21.93 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	6.14 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.88 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.88 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	0.88 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	50.88 %
Unclassified	root	N/A	21.93 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	6.14 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.88 %
unclassified Sporichthya	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → unclassified Sporichthya	0.88 %
Jatrophihabitans endophyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans endophyticus	0.88 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	50.88 %
Unclassified	root	N/A	21.93 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	6.14 %
Micromonospora sp. MSM11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MSM11	0.88 %
Sporichthya sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → unclassified Sporichthya → Sporichthya sp.	0.88 %
Jatrophihabitans endophyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans endophyticus	0.88 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105842419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300000956\|JGI10216J12902_104214390	Not Available	515	Open in IMG/M
3300005162\|Ga0066814_10034941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	770	Open in IMG/M
3300005435\|Ga0070714_100198084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1836	Open in IMG/M
3300005435\|Ga0070714_101513726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	655	Open in IMG/M
3300005436\|Ga0070713_101063781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	781	Open in IMG/M
3300005436\|Ga0070713_101431068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	670	Open in IMG/M
3300005437\|Ga0070710_10114756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1623	Open in IMG/M
3300005437\|Ga0070710_10368347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	955	Open in IMG/M
3300005437\|Ga0070710_10544882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	800	Open in IMG/M
3300005439\|Ga0070711_101696072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	553	Open in IMG/M
3300005440\|Ga0070705_100155529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1522	Open in IMG/M
3300005440\|Ga0070705_101767574	Not Available	524	Open in IMG/M
3300005441\|Ga0070700_100974755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	695	Open in IMG/M
3300005450\|Ga0066682_10154310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1463	Open in IMG/M
3300005518\|Ga0070699_100982961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300005529\|Ga0070741_11034598	Not Available	702	Open in IMG/M
3300005536\|Ga0070697_100716078	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005543\|Ga0070672_100830870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	814	Open in IMG/M
3300005545\|Ga0070695_100781662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	764	Open in IMG/M
3300005602\|Ga0070762_10303699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1006	Open in IMG/M
3300005610\|Ga0070763_10363959	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005614\|Ga0068856_100965927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	870	Open in IMG/M
3300005842\|Ga0068858_100320423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1481	Open in IMG/M
3300005843\|Ga0068860_100167320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2122	Open in IMG/M
3300005843\|Ga0068860_102348497	Not Available	554	Open in IMG/M
3300005844\|Ga0068862_100396864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1290	Open in IMG/M
3300005937\|Ga0081455_10813656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	586	Open in IMG/M
3300006028\|Ga0070717_10059707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3156	Open in IMG/M
3300006163\|Ga0070715_10476947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	709	Open in IMG/M
3300006578\|Ga0074059_12149944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	602	Open in IMG/M
3300006604\|Ga0074060_11858036	Not Available	587	Open in IMG/M
3300006755\|Ga0079222_10493539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	894	Open in IMG/M
3300006914\|Ga0075436_100936119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	649	Open in IMG/M
3300006954\|Ga0079219_11704689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	584	Open in IMG/M
3300007076\|Ga0075435_100718587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	869	Open in IMG/M
3300009098\|Ga0105245_12180822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	608	Open in IMG/M
3300009137\|Ga0066709_104161721	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	527	Open in IMG/M
3300009148\|Ga0105243_10881644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	889	Open in IMG/M
3300009148\|Ga0105243_12510652	Not Available	554	Open in IMG/M
3300009545\|Ga0105237_12241678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	556	Open in IMG/M
3300009545\|Ga0105237_12330122	Not Available	545	Open in IMG/M
3300010043\|Ga0126380_11650420	Not Available	574	Open in IMG/M
3300010323\|Ga0134086_10382453	Not Available	562	Open in IMG/M
3300010359\|Ga0126376_12079863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	611	Open in IMG/M
3300010371\|Ga0134125_12430396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	570	Open in IMG/M
3300010373\|Ga0134128_10905987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	976	Open in IMG/M
3300010373\|Ga0134128_12671863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	550	Open in IMG/M
3300010397\|Ga0134124_13021320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	514	Open in IMG/M
3300010401\|Ga0134121_11997694	Not Available	612	Open in IMG/M
3300010867\|Ga0126347_1081742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MSM11	658	Open in IMG/M
3300010876\|Ga0126361_10329893	Not Available	508	Open in IMG/M
3300011106\|Ga0151489_1653315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	671	Open in IMG/M
3300011119\|Ga0105246_11532753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	627	Open in IMG/M
3300012199\|Ga0137383_10586582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	815	Open in IMG/M
3300012206\|Ga0137380_10856027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	783	Open in IMG/M
3300012207\|Ga0137381_10048960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3483	Open in IMG/M
3300012207\|Ga0137381_11689745	Not Available	523	Open in IMG/M
3300012209\|Ga0137379_10900766	Not Available	789	Open in IMG/M
3300012210\|Ga0137378_11212404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	670	Open in IMG/M
3300012285\|Ga0137370_10664485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	647	Open in IMG/M
3300012349\|Ga0137387_10011216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5276	Open in IMG/M
3300012349\|Ga0137387_10394051	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1004	Open in IMG/M
3300012354\|Ga0137366_10201430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → unclassified Sporichthya → Sporichthya sp.	1487	Open in IMG/M
3300012361\|Ga0137360_10350307	Not Available	1236	Open in IMG/M
3300012473\|Ga0157340_1003256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	881	Open in IMG/M
3300012951\|Ga0164300_10719530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	607	Open in IMG/M
3300012984\|Ga0164309_10573094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	877	Open in IMG/M
3300013102\|Ga0157371_10168806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1563	Open in IMG/M
3300014166\|Ga0134079_10227002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	796	Open in IMG/M
3300014325\|Ga0163163_12628421	Not Available	561	Open in IMG/M
3300015242\|Ga0137412_11310704	Not Available	505	Open in IMG/M
3300015372\|Ga0132256_101334345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300015373\|Ga0132257_104399606	Not Available	513	Open in IMG/M
3300017792\|Ga0163161_10828778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	779	Open in IMG/M
3300018433\|Ga0066667_10362423	Not Available	1157	Open in IMG/M
3300020002\|Ga0193730_1058145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1111	Open in IMG/M
3300020081\|Ga0206354_10774446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	919	Open in IMG/M
3300021401\|Ga0210393_10587333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910	Open in IMG/M
3300021407\|Ga0210383_10989939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300021445\|Ga0182009_10831163	Not Available	507	Open in IMG/M
3300023056\|Ga0233357_1019414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300024181\|Ga0247693_1049618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	606	Open in IMG/M
3300024245\|Ga0247677_1030943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	770	Open in IMG/M
3300024288\|Ga0179589_10618913	Not Available	508	Open in IMG/M
3300025321\|Ga0207656_10089465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1395	Open in IMG/M
3300025464\|Ga0208076_1017792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans endophyticus	1221	Open in IMG/M
3300025494\|Ga0207928_1056779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300025625\|Ga0208219_1001548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	8120	Open in IMG/M
3300025898\|Ga0207692_10241756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1078	Open in IMG/M
3300025904\|Ga0207647_10159319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1317	Open in IMG/M
3300025906\|Ga0207699_11219451	Not Available	557	Open in IMG/M
3300025911\|Ga0207654_10690679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	733	Open in IMG/M
3300025915\|Ga0207693_10995650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	640	Open in IMG/M
3300025924\|Ga0207694_10290197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1345	Open in IMG/M
3300025929\|Ga0207664_11942763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	511	Open in IMG/M
3300025934\|Ga0207686_11298073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	597	Open in IMG/M
3300025961\|Ga0207712_10743821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	859	Open in IMG/M
3300026557\|Ga0179587_10297878	Not Available	1039	Open in IMG/M
3300027725\|Ga0209178_1130760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	856	Open in IMG/M
3300027765\|Ga0209073_10144720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	873	Open in IMG/M
3300028380\|Ga0268265_10389312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1285	Open in IMG/M
3300028715\|Ga0307313_10048007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1246	Open in IMG/M
3300028775\|Ga0302231_10210022	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300028811\|Ga0307292_10086730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1217	Open in IMG/M
3300028828\|Ga0307312_10697415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	672	Open in IMG/M
3300028906\|Ga0308309_10595635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300031718\|Ga0307474_11582845	Not Available	515	Open in IMG/M
3300032013\|Ga0310906_11214113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	549	Open in IMG/M
3300032180\|Ga0307471_103759074	Not Available	537	Open in IMG/M
3300032421\|Ga0310812_10513304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	539	Open in IMG/M
3300033433\|Ga0326726_10492680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1172	Open in IMG/M
3300033475\|Ga0310811_10462854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1350	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.44%
Host-Associated	Host-Associated	24.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.44%
Plants	Host-Associated → Plants	24.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.53%
Peat	Environmental → Terrestrial → Peat	1.75%
Roots	Host-Associated → Plants → Roots	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.63%
Loam	Environmental → Terrestrial → Soil → Loam	21.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.51%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058424192	3300000364	Soil	VGLIVMVLRGRFRRHWKSWLALSILVAAGGGFVLTTASAGHRTADAFPGFAERHGYDVIVYSGKKLPQLSRLPHVTSVTPAVVTYNGAVGCASCHTPIDTRNFLVNEV
JGI10216J12902_1042143902	3300000956	Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEFAARHGYDVIVYSGHRVPQLSRLPHVALATPVVVTYNGAVGCASCHTPIDTRNFLVNEVPPG
Ga0066814_100349412	3300005162	Soil	VRAVVMVLRVRFRQYWKAWLALSLLVAIAGGFVLTTASAGHRTADAFPGFAERHGYDVIVYSGKKLPRLSRLPHVTSVTPALVTYNGAVGCASCRTPIDTRHPA
Ga0070714_1001980841	3300005435	Agricultural Soil	MVLRGRFRQYWKAWLALSLLVAVAGGFVLTTASAGHRTADALPRFTARYGYDTIVYSGHRLTGLTRLPRVSTVTPALVTISGQVGCASCRKPIDTENFLVN
Ga0070714_1015137262	3300005435	Agricultural Soil	VGAVVIVLRARFRQHWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPGYVARHGYDVIVYSPKKLPRLSRLPHVTSVTPAVVTYNGAVGCASCHTPIDTRNFLVNEVPPGQLPR
Ga0070713_1010637812	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VGAVVIVLRARFRQHWRSWLALSLLVAVAGGFVLTTASAGHRTADAFPGYVARHGYDVIVYSPKKLPRLSRLPHVTSVTPAVVTYNGDVGCASCHTPIDTRNFLVNEVPPGQLPRMMTLLSGRM
Ga0070713_1014310681	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVLRGRFRQYWKAWLALSLLVAVAGGFVLTTASAGHRTADALPRFTARYGYDTIVYSGHRLTGLTRLPRVSTVTPALVTISGQ
Ga0070710_101147563	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MVLRGRFRQYWKSWLALSVLVAVAGGFVLTTASAGHRTAGAFGRFTARYGYDTIVYSGHRLAGLTRLPRVSTVTPALVTISGQVGCAS
Ga0070710_102970081	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVVMVLRGRFRQYRASWLALSVLVAVAGGFVLATVVAARHTADAYPRFVARHGYDVIAYSGQPLPQLARLPHVASSVPV
Ga0070710_103683472	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VGAVVIVLRARFRQHWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPGYVARHGYDVIVYSPKKLPRLSRLPHVTSVTPAVVTYNGDVGCASCHTLIDTRNFLVNEVPPGQLPRMMT
Ga0070710_105448821	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVALAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGC
Ga0070711_1016960722	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTY
Ga0070705_1001555295	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VGAVVMVLRARFRQYWKSWLALSLLVAVAGGFVLTTAAAGHRTAAAFPEFAARHGYDVIVYSGKPLPQLTTLPDVSSATPVPVTVSGDVGCASCRRPIDT
Ga0070705_1017675741	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAIAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCTSCRKPIDTRNFLVNEVPPGQL
Ga0070700_1009747551	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVALAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCASCRKPIDTRNFLINE
Ga0066682_101543101	3300005450	Soil	VRAVVMVLRMRFRQYWKSWLALGLLVAVAGGSVLIAADAARRTSAAFPGFAARHGYDVIVYSGQPLPQLARLPYVAS
Ga0070699_1009829612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VQAVVMVLRARFRQYWKSWLALSLLVAVAGGFVLTTAAAGHRTATAFPEFRARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCTSCRKPIDTRNFLVNEVP
Ga0070741_110345983	3300005529	Surface Soil	MVLRGRFRQYWKSWLALSLLVTVAGGFALTTAAAAHRTAGAFPAYAARHGYDVIVYSAEPLPQLARLPRVSSVTPVTITYSGGVGCASCRKPIDTENF
Ga0070697_1007160782	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VGTVVMVLRARFRQYWKSWLALSLLVAVAGGFVLTTAAAGHRTAHAFPEFAARHGYDVIVYSGQPLPQLTRLPHVSSATPVPVTV
Ga0070672_1008308702	3300005543	Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCTSCRKPIDTRNFLVNEVPP
Ga0070695_1007816622	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCASCRKPIDTRNFLINEVPPGQLP
Ga0070762_103036993	3300005602	Soil	MVLRGRFRQYWKSWLALSVLVALAGGFVLASAAAGRRTAAALPGFTARHGYDVIVYSGRPLPQLTRLPHAVAVTPVPATF
Ga0070763_103639591	3300005610	Soil	MVLRGRFRQYWKSWLALSVLVALAGGFVLASAAAGRRTAAALPGFTARHGYDVIVYSGRPLPGLTRLPHAVAVTPVPAAFPVTLGCASCRKPIDLENTLINEVPPG
Ga0068856_1009659272	3300005614	Corn Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCVSCRKPIDTRDFLVNEVPPGQLP
Ga0068858_1003204231	3300005842	Switchgrass Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGYRVPQLSRLPHVTSVTPALVTYNGAVG
Ga0068860_1001673201	3300005843	Switchgrass Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEFAARHGYDVIVYSGHPVPQLSRLPHVTSATPVVVTYNGAVGCASCHTPIDTRNFLVNEVPPGQLPRMMTLL
Ga0068860_1023484972	3300005843	Switchgrass Rhizosphere	VQAVVMVLRARFRQYWKSWLALSLLVAAAGGFVLTTASAGHRTADAFPGYVTRHGYDVIVYSPKKLPRLSRLPHVTSVTPALVTYNDTVDCASCHTPIDTRNFLV
Ga0068862_1003968642	3300005844	Switchgrass Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVALAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCASCRKPI
Ga0081455_108136562	3300005937	Tabebuia Heterophylla Rhizosphere	VGLIVMVLRGRFRRYWKSWLALSILVAVAGGFVLATASAGHRTADAFPGFVARHGYDVIVYSGKKLPQLSRLPHVTSATPVPATVSDSVSCASCRKPIDNDNFLVN
Ga0070717_100597071	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVLRGRFRQYWKAWLALSVLIALAGGFVLTTASAGHRTAGAFPRFTARYGYDTIVYSGHRLTGLTRLPRVSTVTPALVTIS
Ga0070715_104769471	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVALAGGFVLTTASAGHRTADAFPGYVTRHGYDVIVYSPKKLPRLSRLPHVTSVTPAVVTYNGAVGCASCHTPIDIRNFLVNEVPPGQLPRMMTLL
Ga0074059_121499442	3300006578	Soil	VRAVVMVLRVRFRQYWKPWLALSLLVAVAGGFVLSTASAGHRTADAFPGFVARHGYDVIVYSGKKLPRLSRLPHVTSVTP
Ga0074060_118580361	3300006604	Soil	MVLRGRFRQYWKAWLALSLLIAIAGGFVLSTASAGHRTADAFPGFAERHGYDVIVYSGKKLPRLSRLPHVTSVTPALVTYNGAVGCASCRTPIDTR
Ga0079222_104935392	3300006755	Agricultural Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTAHAFPDFAARHGYDVIVYSEKKLPQLSRLTHVSSATPVPVTVSATVGCASCRKPIDTDNFLVNEVPP
Ga0075436_1009361191	3300006914	Populus Rhizosphere	VQAVVMVLRARSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPQFTARHGYDVIVYSEKKLPQLSRLPHVSSATPVPVTVSDTVGCASCRKPIDTDN
Ga0079219_117046891	3300006954	Agricultural Soil	MVLRGRFRQYWKSWLALSVLVAVAGGFVLATASAGHRTADAFPRFTARYGYDTIVYSGHPLPRLARLPRVSAVTPALVTISGDVG
Ga0075435_1007185872	3300007076	Populus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSV
Ga0105245_121808221	3300009098	Miscanthus Rhizosphere	VAVQAVVMVLRARSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTAHAFPDFAARHGYDVIVYSGKKLPQVSTLPHVSSATPVPVTISDTVGCASCRKPIETINFLVNE
Ga0066709_1041617211	3300009137	Grasslands Soil	VPEEVAVRAVVMVLRARFRQYWKSWLALSLLVAVAGGFVLTTAAAGHRTADAFPGFAARHGYDVIVYSRQPLPQLTRLPHVASATPVPVTVSGDVGCASCRKP
Ga0105243_108816441	3300009148	Miscanthus Rhizosphere	MVLRARFRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEFAARHGYDVIVYSGHPVPQLSRLPHVTSVTPALVTYNGAVGCA
Ga0105243_125106522	3300009148	Miscanthus Rhizosphere	VAVGLIVMVLRGRFRQYWKAWLALGLLVAVAGGFVLSTASAGHRTADAFPGFAERHGYDVIVYSGHPVPQLSRLPHVTSVTPALVTY
Ga0105237_122416781	3300009545	Corn Rhizosphere	MVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTADAFPGFAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAV
Ga0105237_123301222	3300009545	Corn Rhizosphere	VAVQAVVMVLRARSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTAHAFPDFAARHGYDVIVYSEKKLPQLSTLPHVSSATPVPVTISDTVGCASCRKPIETINFLV
Ga0126380_116504201	3300010043	Tropical Forest Soil	MVLRVRSRQYWRSWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGHRVPQLSRLPNVTSVTPVVVTYNGAVGCASCHTPIDTRNFLVNEVPPGQLPRMMT
Ga0134086_103824531	3300010323	Grasslands Soil	MRAVVMVSRGRFWQYWKSWLALSVLVALAGGFVMTVVASGRRTEAAFPEFAARHGYDVIVYSGHSLPQLARLPDVALVTPVLVPVSGAPRCVSCRKPIDAEDFLI
Ga0126376_120798631	3300010359	Tropical Forest Soil	MVLRVRSRQYWRSWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGHRVPQLSRLPNVTSVTPVVVTYNGAVGCASCHTPIDTRNFLVNEVAPGQ
Ga0134125_124303961	3300010371	Terrestrial Soil	MVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTADAFPGFAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCTS
Ga0134128_109059872	3300010373	Terrestrial Soil	MVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEFAARHGYDVIVYSGHPVPQLSRLPHVTSATPVVVTYNGAVGCASCHTPIDTRNFLVNEVPPGQL
Ga0134128_126718631	3300010373	Terrestrial Soil	MVLRGRFRQYWKAWLALSLLVALAGGFVLTTASAGHRTAGAFPRFTARYGYDTIVYSGHRLTGLTRLPRVSAVTPALVTISGDVGCASCRKDAPVNNLMVRSQLACSPRP
Ga0134124_130213201	3300010397	Terrestrial Soil	MVLRVRSRQYWKSWLALSLLVALAGGFVLTTASAGHRTVHAFPDFAARHGYDVIVYSEKKLPQLSTLPHVSSATPVP
Ga0134121_119976942	3300010401	Terrestrial Soil	MRAVVMVLRGRLRQYWKSWLALSALVAVTGGFVLATTVTARRTAAAFPQFVAAHGYDVIVYSGRPLPRLAQLPQVASAVSVPAAFSGRLGCASCRKPIDAEQMLINEVPPRELPRMVTLL
Ga0126347_10817422	3300010867	Boreal Forest Soil	MGAVVVVLRGRFRQYWKSWLALSLLVAVAGGFVLATTVAARRTADAFPRFADRHGYDVIVYSGEPLPQLARLPHVSSVVPVPASLSDHLRCPSCRRP
Ga0126361_103298931	3300010876	Boreal Forest Soil	MVVQGRFRQYWKSWLALSLLVAVAGGFVLATAVSARRTADAFPQFAARHGYDVIVYSGHQLPQLARLPHIASALPVPATFTGQLRCGSCHTPIDSNSMLINEVPPRELPRMV
Ga0151489_16533152	3300011106	Soil	VAVGLIVMVLRGRFRQYWKAWLALSLLIAIAGGFVLSTASAGHRTADAFPGFAERHGYDVIVYSGTPLPQLTRLPHVSSATPVPVTVSVDVGCASCRKPIDNDKF
Ga0105246_115327531	3300011119	Miscanthus Rhizosphere	MVLRGRFRQYWKAWLALSVLIALAGGFVLTTASAGHRTAGAFPRFTARYGYDTIVYSGHRLTGLTRLPRVSTVTP
Ga0137383_105865821	3300012199	Vadose Zone Soil	MVLRGRFRRYWKSWLALSVLVAVAGGFVLITASAGHRTADAFPGFVARHGYDVIVYNGKKLPQLSRLPHVTSVTPVVVTYNEAVGCAS
Ga0137380_108560271	3300012206	Vadose Zone Soil	MVLRGRFRQYWKSWLALSLLVAVAGGFVMTAAAAGHRTAAAFPDFAARHGYDVIVYSGQPLPQMTRLPHVASVTPVLVTING
Ga0137381_100489603	3300012207	Vadose Zone Soil	VRAVVLVLRGRFRQCWKSWLALSVLIAVAGGFVMSAAAAGRRTAAAFPEFAARHGYDVIVYSGQPLPQMTRLPHVASVTPVLVPISGALRCPSCQKPIDTENFLINEVPPRQLPRLVTLLSG
Ga0137381_116897451	3300012207	Vadose Zone Soil	MRAVVMVLRARRRQYWKSWLALSVLVAVIGGFVLAAAVAGRRTAGAFPGFVARHGYDAVVYAGHARLRPADLPPGAQVTTALLPYAAPPRCAS
Ga0137379_109007661	3300012209	Vadose Zone Soil	MILRGRFRQHWESWLALSVLVAVAGGFVLAATVAGRRTAAAFPGFTARHGYDVIVYIGRPLPQLARLPHVASVTPVLVPISGALHCASCRKPIDTEDFLINEVPPGQ
Ga0137378_112124041	3300012210	Vadose Zone Soil	MVLRGRFWQHWKSWLALSLLVAVAGGFVMTAAAAGHRTAAAFPDFAARHGYDVIVYSGQPLPQMTRLPHVASVTPVLVTING
Ga0137370_106644851	3300012285	Vadose Zone Soil	MVLRGRFRRHWKSWLALSILVAVGGGFVLTTASAGHRTAAAFPGFVARHGYDVIVYNGKKLPQLSRLPHVTSVTPALVTYSGAVGCASCHTPIDNRNFLVNEVPPGQLPRMMTLL
Ga0137387_100112161	3300012349	Vadose Zone Soil	MVLRGRFRQHWKSWLALSVLVAVAGGFVLAATVTARRTAAAFPGFAARHGYDVVVYNGQPLPHLARLPHVASVVLAAVPALLAARSHPGQLLRAE*
Ga0137387_103940511	3300012349	Vadose Zone Soil	VRAVVLVLRGRFRQCWKSWLALSVLIAVAGGFVMSAAAAGRRTAAAFPEFAARHGYDVIVYSGQPLPQMTRLPHVASVTPVLVPISGALRCPSCQKPIDTENF
Ga0137366_102014301	3300012354	Vadose Zone Soil	MVLRGRFRRYWKSWLALSVLVAVAGAFVMATVAAGRRTAATFPEFVARHGYDVIVYSGRPLPQMTRLPHVASVTPVTVPLSGALGCTSCRKPIDA
Ga0137360_103503071	3300012361	Vadose Zone Soil	VRAAVLICGARFRQYWKAWLALGLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGKKLPQLSRMPHVTSVTPALVTYNAAVG
Ga0157340_10032562	3300012473	Arabidopsis Rhizosphere	MLLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTAGAFPGFVVRHGYDVIVYSPKKLPRLSRLPHVTSVTPAVVTYNGAVGCASCHTPID
Ga0164300_107195302	3300012951	Soil	MVLRARFRQYWKSWLALSLLVAAAGGFVLTTASAGHRTAHAFPEFAARHGYDVIVYSGKKLPQVSTLPHVSSATPVPVTVSDTVGCASCRKPIDTDNFLVNEVPPGQL
Ga0164309_105730941	3300012984	Soil	MVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTADAFPGFAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYN
Ga0157371_101688061	3300013102	Corn Rhizosphere	MVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTADAFPGFAARHGYDVIVYSGHRVPRLSRLPHVTSVTPALVTYNGAVGCASCHTPIDTRN
Ga0134079_102270021	3300014166	Grasslands Soil	MVLRGRFRRHWKSWLALSILVAVGGGFVLTTASAGHRTAAAFPGFVARHGYDVIVYSGKPLPQLSGLPHVTSATPVPATVSDSVSCASCRKPI
Ga0163163_126284211	3300014325	Switchgrass Rhizosphere	VAVQAVVMVLRARSRKYWKSWLALSLLVAVAGGFVLTTASAGHRTAHAFPDFAARHGYDVIVYSEKKLPQLSTLPHVSSATPVPVTISDAVGCASCRKPIDTINF
Ga0137412_113107041	3300015242	Vadose Zone Soil	VAVGLIVMVLRGRFRQYWKAWLALGLLVAIAGGFVLSTASAGHRTADAFPGFAARHGYDVVVYSGKPLPHLGTPRHSEDLSRLRQR
Ga0132256_1013343451	3300015372	Arabidopsis Rhizosphere	MVLRVRFRQYWKPWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARQGYDVIVYSGKKLPQLSRLPHVTSVTPALVTYNG
Ga0132257_1043996061	3300015373	Arabidopsis Rhizosphere	MVLRVRFRQYWKPWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGKKLPQLSRLPHVTSVTPALVTYNGAVACASCHTPIDTRNFLVNEVPPGQLPRMM
Ga0163161_108287782	3300017792	Switchgrass Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTADAFPGFAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGC
Ga0066667_103624231	3300018433	Grasslands Soil	MRAVVMVSRGRFWQYWKSWLALSVLVALAGGFVMTVVASGRRTEAAFPEFAARHGYDVIVYSGHSLPQLARLPDVALVTPVLVPVSGAPRCVSCRKPIDAEDFLINEVPPRQL
Ga0193730_10581451	3300020002	Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEFAARHGYDVIVYSGHRVPQLSRLPHVTSATPVVVTYNGAV
Ga0206354_107744461	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCVSCRKPIDTRDFLVNEV
Ga0210393_105873332	3300021401	Soil	MVLRGRFRQYWKSWLALSVLVALAGGFVLASAAAGRRTAAALPGFAARHGYDVIVYSGRPLPQLARLPHAVAVTPVPAAFPVTLGCASCRKPIDLEDTLINEVPPG
Ga0210383_109899391	3300021407	Soil	MVLRGRFRQYWKSWLALSVLVALAGGFVLASAAAGRRTAAALPEFTARHGYDVIVYSGRPLPQLARLPHAVAVTPVPAAFPVTLGCA
Ga0182009_108311631	3300021445	Soil	VRAVVMVLRMRFRQYWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGKPLPQLSRLPHVTSVTPAVVTYNGAVGCASC
Ga0233357_10194142	3300023056	Soil	MRAVVVVLRGRLRQHWKSWLALSVLVAVAGGFVLATAAAGRRTAAAVPGFTARHGYDVIVYSERPQPQMTRLPHVVSVTPVPA
Ga0247693_10496182	3300024181	Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCVSCRKPI
Ga0247677_10309431	3300024245	Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNG
Ga0179589_106189132	3300024288	Vadose Zone Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGRPLPQLTRLPDVSSVTPVPVTYSAGVGCASCRKP
Ga0207656_100894651	3300025321	Corn Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTADAFPGFAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALV
Ga0208076_10177921	3300025464	Arctic Peat Soil	VRAVVMLLHGRLRQYGKSWLALSVLVAVAGGFVLATMVAAHRTAIALPGFVARHGDNVVVYSPQPLPQLVRLPNVASVTPVIAPYAAKPLCTSCRKPIDATNFLVN
Ga0207928_10567791	3300025494	Arctic Peat Soil	VGTVVMVLRGRFRQYWKSWLALGLLVAVAGGFVLTTASAGRRTADAFPGFAARHGYDAIAYSQVPQPKLTGLPHVSS
Ga0208219_10015488	3300025625	Arctic Peat Soil	MRAVVMVLRGRLRQHWKSWLALSVLVAVAGGFVLATTAAGRRTAAAVPGFTARHGYDVIVYSERPQPQMTRLPHVVSVTPVPAAFADTLRCASCRKPIDTENTLINEVAPGQLPRM
Ga0207692_102417561	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VRTVVMVLRGRFRQYWKAWLALSLLVAVAGGFVLTTASAGHRTANAFPEFVVRHGYDAIVYSGKPLPQLGRLPRVSAVTPVPVPVSGAVGCTSCRKPIDT
Ga0207647_101593191	3300025904	Corn Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVGGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCASCHTPISRG
Ga0207699_112194511	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VQAVVMVLRARSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTAHAFPDFAARHGYDVIVYSEKKLPQLSTLPHVSSATPVPVTVSATVGCASCRKPIDNDNFLVNEVPPGQLLR
Ga0207654_106906792	3300025911	Corn Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGC
Ga0207693_109956501	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VGAVVIVLRARFRQHWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPGYVARHGYDVIVYSPKKLPRLSRLPHVTSVTPAVVTYNGAVGCASCHTPIDT
Ga0207694_102901971	3300025924	Corn Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTLVTPAL
Ga0207664_119427632	3300025929	Agricultural Soil	MVLRGRFRQYWKAWLALSVLVALAGGFVLTTASAGHRTAGAFPRFTARYGYDTIVYSGHRLAGLTRLPRVSTVTPALVTISGDVGCASCRKPIDIENFLVNQVAP
Ga0207686_112980731	3300025934	Miscanthus Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHPVPQLSRLPHVTSATPVVVTYNGAVGCASCHTPIDTRNFLVNE
Ga0207712_107438212	3300025961	Switchgrass Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSGHRVPQLSRLPHVTSVTPALVTYNGAVGCVSCRKPID
Ga0179587_102978782	3300026557	Vadose Zone Soil	MRAVVMVLRGRFRQHWKSWLALSVLVALAGGFVLATTAAARRTSAAVPGFVARHGYDVIVYSGKPLPQMARLPHVVSMTQVPAAFAVTLGCRSCRKPIDAENTLINEVPPGQLPRA
Ga0209178_11307602	3300027725	Agricultural Soil	MVLRGRFRQYWKAWLALSLLVALAGGFVLTTASAGHRTAGAFPRFTARYGYDTIVYSGHRLTGLTRLPRVSTVTPALVTISADVGCASCRKPID
Ga0209073_101447201	3300027765	Agricultural Soil	VGAVVMVLRARFRQHWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPQFTARHGYDVIVYSEKKLPQLSRLPHVSSATPVPVTVSDTVGCASCRKPIDTDNFLV
Ga0268265_103893122	3300028380	Switchgrass Rhizosphere	VRAVVMVLRVRSRQYWKSWLALSLLVALAGGFVLTTASAGHRTSHAFPEYAARHGYDVIVYSEKKLPQLTRLPHVSSATPVPVTVSDTVGCAS
Ga0307313_100480071	3300028715	Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEFAARHGYDVIVYSGHRVPQLSRLPHVTSATPAVVTYNGAVGCASCHTPIDTRN
Ga0302231_102100221	3300028775	Palsa	VRAVVMVVQGRFRQYWKSWLALSLLVAVAGGFVLATAVSARRTADAFPQFAARHGYDVIVYSGQPLPQLARLPHVASALPVPATFTGQ
Ga0307292_100867302	3300028811	Soil	VRAVVMVLRVRSRQYWKSWLALSLLVAVAGGFVLTTASAGHRTSHAFPEFAARHGYDVIVYSGHRVPQLSRLPHVTSATPAVVTYNGAVGCASCHTPIDTRNF
Ga0307312_106974152	3300028828	Soil	VGLIVMVLRGRFRRHWKSWLALSILVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSPKKLPQLSRLPHVTSVTPAV
Ga0308309_105956352	3300028906	Soil	VRAVVMVLRGRFRQYWKSWLALSVLVALAGGFVLASAAAGRRTAAALPGFTARHGYDVIVYSGRPLPGLTRLPHAVAVTPVPAAFPVTLGCASCRKPIDLENTLINEVPPGQLP
Ga0307474_115828451	3300031718	Hardwood Forest Soil	VQAVVMVLRARFRQYWKSWLALSLLVAVAGGFVLTTASAGHRTAHAFPDFAARHGYDVIVYSEKKLPQLSTLPHVSSATPVPVTVSATVGCASCRK
Ga0310906_112141131	3300032013	Soil	VQAVVMVLRARFRQYWKSWLALSLLVAAAGGFVLTTASAGHRTAHAFPEFAARHGYDVIVYSGKKLPQVSTLPHVSSATPVPVTI
Ga0307471_1037590742	3300032180	Hardwood Forest Soil	VGLIVMVLRGRFRQYWRAWLALGLLVAVAGGFVLTTASAGHRTADAFPGFAERHGYDVIVYSGHPVPQLSRLPHVTSVTPALVTYNGAVGCAS
Ga0310812_105133042	3300032421	Soil	VRAVVMVLRMRFRQYWKSWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGKPLPQLSRLPHVTSVTPAVVTYNGAVG
Ga0326726_104926802	3300033433	Peat Soil	VRAVVMVLRMRFRQYWKPWLALSLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGKRLPQLSRLPHVTSVTPALVTYNDTVGCASCRTPIDTRNFLVDEVPPGQLPRMTT
Ga0310811_104628542	3300033475	Soil	VRAVVLVLRMRFRQYWKSWLALGLLVAVAGGFVLTTASAGHRTADAFPGFVARHGYDVIVYSGKPLPQLSRLPHVTSVTPAVVTYNGAVGCASCHTPIDTRNFLVNEVAPGQLPRMMTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences