Metagenome / Metatranscriptome Family F081727

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081727
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	60 residues
Representative Sequence	MPPTVKENEILAAKPDTAQRPAPTSTLPGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFS
Number of Associated Samples	82
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	88.60 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.263 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (56.140 % of family members)
Environment Ontology (ENVO)	Unclassified (55.263 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.140 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 4.44% Coil/Unstructured: 95.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF02627	CMD	69.30
PF13620	CarboxypepD_reg	4.39
PF01933	CofD	0.88
PF07719	TPR_2	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	69.30
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	69.30
COG0391	Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family	Carbohydrate transport and metabolism [G]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
All Organisms	root	All Organisms	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
cellular organisms	root	All Organisms → cellular organisms	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.51 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.51 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.51 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.51 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1051004	Not Available	511	Open in IMG/M
3300002909\|JGI25388J43891_1028479	Not Available	927	Open in IMG/M
3300002914\|JGI25617J43924_10167212	Not Available	742	Open in IMG/M
3300002917\|JGI25616J43925_10296845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005160\|Ga0066820_1002673	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005167\|Ga0066672_10164075	Not Available	1400	Open in IMG/M
3300005178\|Ga0066688_10593367	Not Available	712	Open in IMG/M
3300005450\|Ga0066682_10907473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005451\|Ga0066681_10675878	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300005555\|Ga0066692_10591501	Not Available	698	Open in IMG/M
3300005586\|Ga0066691_10261397	Not Available	1018	Open in IMG/M
3300006047\|Ga0075024_100389866	Not Available	706	Open in IMG/M
3300006172\|Ga0075018_10042686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1859	Open in IMG/M
3300006796\|Ga0066665_11622760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300007258\|Ga0099793_10037436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2093	Open in IMG/M
3300007258\|Ga0099793_10361273	Not Available	711	Open in IMG/M
3300007265\|Ga0099794_10213565	Not Available	990	Open in IMG/M
3300009088\|Ga0099830_10922202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300009089\|Ga0099828_11800811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009090\|Ga0099827_10332172	Not Available	1291	Open in IMG/M
3300009090\|Ga0099827_11159544	Not Available	671	Open in IMG/M
3300010303\|Ga0134082_10137062	Not Available	984	Open in IMG/M
3300010321\|Ga0134067_10055658	Not Available	1283	Open in IMG/M
3300010326\|Ga0134065_10300577	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300010335\|Ga0134063_10609003	Not Available	557	Open in IMG/M
3300010337\|Ga0134062_10403971	Not Available	669	Open in IMG/M
3300011269\|Ga0137392_10013993	All Organisms → cellular organisms → Bacteria → Acidobacteria	5432	Open in IMG/M
3300011269\|Ga0137392_10503751	Not Available	1006	Open in IMG/M
3300011269\|Ga0137392_10897987	Not Available	729	Open in IMG/M
3300011269\|Ga0137392_11609240	Not Available	508	Open in IMG/M
3300011270\|Ga0137391_10485691	Not Available	1047	Open in IMG/M
3300011271\|Ga0137393_11096630	Not Available	677	Open in IMG/M
3300012189\|Ga0137388_10076698	All Organisms → cellular organisms → Bacteria → Acidobacteria	2803	Open in IMG/M
3300012189\|Ga0137388_10760963	Not Available	899	Open in IMG/M
3300012189\|Ga0137388_10989524	Not Available	776	Open in IMG/M
3300012199\|Ga0137383_10512504	Not Available	878	Open in IMG/M
3300012200\|Ga0137382_11016573	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300012202\|Ga0137363_10379851	Not Available	1174	Open in IMG/M
3300012203\|Ga0137399_10192686	All Organisms → cellular organisms → Bacteria → Acidobacteria	1651	Open in IMG/M
3300012203\|Ga0137399_10654105	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300012203\|Ga0137399_10988443	Not Available	709	Open in IMG/M
3300012203\|Ga0137399_11304343	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300012205\|Ga0137362_11567259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012205\|Ga0137362_11748589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300012208\|Ga0137376_11664169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012209\|Ga0137379_11642642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012210\|Ga0137378_11095396	Not Available	711	Open in IMG/M
3300012211\|Ga0137377_10358309	Not Available	1395	Open in IMG/M
3300012211\|Ga0137377_10388404	Not Available	1333	Open in IMG/M
3300012211\|Ga0137377_10718291	Not Available	933	Open in IMG/M
3300012349\|Ga0137387_10243170	Not Available	1296	Open in IMG/M
3300012351\|Ga0137386_11052475	Not Available	577	Open in IMG/M
3300012361\|Ga0137360_10007699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6707	Open in IMG/M
3300012362\|Ga0137361_10006439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8033	Open in IMG/M
3300012362\|Ga0137361_11221906	Not Available	675	Open in IMG/M
3300012362\|Ga0137361_11333583	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300012582\|Ga0137358_10806284	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300012917\|Ga0137395_11035802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012918\|Ga0137396_10430651	Not Available	978	Open in IMG/M
3300012925\|Ga0137419_10412153	Not Available	1058	Open in IMG/M
3300012925\|Ga0137419_10707191	Not Available	818	Open in IMG/M
3300012925\|Ga0137419_10911599	Not Available	724	Open in IMG/M
3300012925\|Ga0137419_11583971	Not Available	557	Open in IMG/M
3300012927\|Ga0137416_11076173	Not Available	721	Open in IMG/M
3300012927\|Ga0137416_11166323	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300012927\|Ga0137416_11914533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012929\|Ga0137404_11296983	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300012929\|Ga0137404_11727899	Not Available	581	Open in IMG/M
3300012930\|Ga0137407_11462144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300015241\|Ga0137418_11014442	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300015264\|Ga0137403_10006312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13591	Open in IMG/M
3300015356\|Ga0134073_10258195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300018468\|Ga0066662_10836798	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300019866\|Ga0193756_1059262	Not Available	509	Open in IMG/M
3300020170\|Ga0179594_10014504	All Organisms → cellular organisms → Bacteria → Acidobacteria	2277	Open in IMG/M
3300020581\|Ga0210399_11578090	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300020583\|Ga0210401_11214087	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300021046\|Ga0215015_10883381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	525	Open in IMG/M
3300021088\|Ga0210404_10476875	Not Available	703	Open in IMG/M
3300021170\|Ga0210400_10017927	All Organisms → cellular organisms → Bacteria	5553	Open in IMG/M
3300021170\|Ga0210400_10446056	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300021170\|Ga0210400_11222401	Not Available	605	Open in IMG/M
3300021178\|Ga0210408_10821831	Not Available	727	Open in IMG/M
3300021178\|Ga0210408_11090713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021478\|Ga0210402_10054035	All Organisms → cellular organisms → Bacteria → Acidobacteria	3516	Open in IMG/M
3300021479\|Ga0210410_10330934	Not Available	1366	Open in IMG/M
3300021559\|Ga0210409_10145325	All Organisms → cellular organisms → Bacteria → Acidobacteria	2174	Open in IMG/M
3300024330\|Ga0137417_1288069	Not Available	1407	Open in IMG/M
3300024330\|Ga0137417_1305426	Not Available	1098	Open in IMG/M
3300024330\|Ga0137417_1319970	Not Available	754	Open in IMG/M
3300026332\|Ga0209803_1306790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300026334\|Ga0209377_1167703	Not Available	803	Open in IMG/M
3300026499\|Ga0257181_1031495	Not Available	834	Open in IMG/M
3300026557\|Ga0179587_10105965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1707	Open in IMG/M
3300026557\|Ga0179587_10118854	All Organisms → cellular organisms → Bacteria → Acidobacteria	1619	Open in IMG/M
3300027070\|Ga0208365_1058239	Not Available	520	Open in IMG/M
3300027310\|Ga0207983_1059316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300027643\|Ga0209076_1036797	Not Available	1373	Open in IMG/M
3300027643\|Ga0209076_1122996	Not Available	733	Open in IMG/M
3300027645\|Ga0209117_1097207	Not Available	808	Open in IMG/M
3300027854\|Ga0209517_10576547	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300027882\|Ga0209590_10275264	Not Available	1077	Open in IMG/M
3300027910\|Ga0209583_10113832	Not Available	1060	Open in IMG/M
3300028047\|Ga0209526_10192075	Not Available	1417	Open in IMG/M
3300028536\|Ga0137415_10028536	All Organisms → cellular organisms → Bacteria → Acidobacteria	5498	Open in IMG/M
3300028536\|Ga0137415_10781199	Not Available	765	Open in IMG/M
3300029636\|Ga0222749_10335444	Not Available	789	Open in IMG/M
3300031754\|Ga0307475_11130517	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300031823\|Ga0307478_11631158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031823\|Ga0307478_11815544	Not Available	501	Open in IMG/M
3300031962\|Ga0307479_10029952	Not Available	5187	Open in IMG/M
3300031962\|Ga0307479_10420264	All Organisms → cellular organisms → Bacteria → Acidobacteria	1321	Open in IMG/M
3300031962\|Ga0307479_11472513	Not Available	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.37%
Aquatic	Environmental → Aquatic	2.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.37%
Sediment	Environmental → Aquatic → Sediment	2.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.86%
Loam	Environmental → Terrestrial → Soil → Loam	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	56.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.51%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10510042	3300001154	Forest Soil	MPPTVKENEILTARPETAQRPVSTAALPGDTAIKQQPVALEVSVTVN
JGI25388J43891_10284792	3300002909	Grasslands Soil	MPPTVKENEILAAKPDTAQRPAPTSTLPGDTAIKQQPVALEVPVTVNGARTVDGSDKREPFS
JGI25617J43924_101672122	3300002914	Grasslands Soil	MPPTVKENEILAARLEAAQRPAPNATASGEAAIKQQPVALEVPVTVNGARAVEGSDK
JGI25616J43925_102968452	3300002917	Grasslands Soil	MPPIVKENENSTSRPETVQRPSPVPTLPGDSAIKQQPVALEVPVTINGARAVEGSDKREPFSE
Ga0066820_10026731	3300005160	Soil	MPPTVKENEIAAAGPETAQRPAPASAAPADASIKQQPVALEVPVTVNGARSVEGGDKRE
Ga0066672_101640751	3300005167	Soil	MPPTVKENEILAAKPDTAQRPAPTSTLPGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVL
Ga0066688_105933671	3300005178	Soil	MPPTLKDAVNLTAKPESAARTASGSALPGDSAIKQQPVALEVPVTVNGARAAEGSDKREPFSESTKTVLIFG
Ga0066682_109074731	3300005450	Soil	MPPTVKENEILAAKPDTAQRPAPTSTLAGDAAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTV
Ga0066681_106758781	3300005451	Soil	MPPTVKENEILAAKPDTAQRPAPTSTLPGDTAIKQQPVALEVPVTVNGARTVDGS
Ga0066692_105915012	3300005555	Soil	MPPTVKENEILATRPETAQRPAPTTTSPGDAAIKQQPVALEVPITINGARAVEGSDKR
Ga0066691_102613973	3300005586	Soil	MPPTVKENEILAAKPDTVQRPAPTSALPGDVAIKQQPVAL
Ga0075024_1003898661	3300006047	Watersheds	MPPTVKENEISTARPETAPRPASTATLPGDAGIKQQPVALEVPVTVNGARTVEGTDKREPFSETTK
Ga0075018_100426861	3300006172	Watersheds	MPPTVKENEISSARPDTLPRPASTASLPGDTGIKQQPVALEVPVTVNGAR
Ga0066665_116227601	3300006796	Soil	MPPTVKENESLTARPETAQRPAPNATASGEGAIKQQPVALEVPVTINGARALEGSDKREPFSESTKTVLIFGNGAVIRL
Ga0099793_100374363	3300007258	Vadose Zone Soil	MPPTVKENEILAAKPDTAQRLAPTSALPGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFS
Ga0099793_103612732	3300007258	Vadose Zone Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVTVNGARTVEGSDKRE
Ga0099794_102135651	3300007265	Vadose Zone Soil	MGRQAESSFASVQAMPPTFKENGISSARPEAAQRPAPTTSSGDAAIKQQPVALEVPVTINGARAVEGSDKREP
Ga0099830_109222022	3300009088	Vadose Zone Soil	MPPTVKENRISTARPQTAQRPASTTTLPGDTAIKQQPVALEVPVTVNGARAVEGSDKREPFSETTKTVLIFGNGAVIRLS
Ga0099828_118008111	3300009089	Vadose Zone Soil	MPPTVKENESLTARPGTAQRPASTTTSHADAAIKQQPVALEVPVTVNGARAVEGSDKREPFSETTKTVLIF
Ga0099827_103321721	3300009090	Vadose Zone Soil	MPPTVKENESLTARPETAQHPAPNATASGEAAIKQQPVA
Ga0099827_111595442	3300009090	Vadose Zone Soil	MPPTVKENEILAAKPDTAQRPAPTSTLPGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFS
Ga0134082_101370622	3300010303	Grasslands Soil	MPPTVKENEILAAKPDTAQRPAPTSTLPGDTAIKQQPVALEVPVTVNGARTVDGSDKR
Ga0134067_100556583	3300010321	Grasslands Soil	MPPTAKEKEISAARPDTVQGPAPNSTLPGDTAVKQQPVALEVPVTVNGARTVEGSDK
Ga0134065_103005772	3300010326	Grasslands Soil	MPPTAKEKEISAARPDTVQGPAPNSTLPGDTAVKQQPVALEVPVTVNGARTVEGSDKR
Ga0134063_106090032	3300010335	Grasslands Soil	MPPTAKDNEISPARPETAQGAAPTSALPGDSAIKQQPVALDVPVTINGARTV
Ga0134062_104039712	3300010337	Grasslands Soil	MPPTAKEKEISAARPDTAQGPEPNSTLPGDTAVKQQPVALEVPVTVNGAR
Ga0137392_100139931	3300011269	Vadose Zone Soil	MSPIVKENEISTSRPEMGQRPASPATLPGDTAAKQQPVALEVPV
Ga0137392_105037511	3300011269	Vadose Zone Soil	MPPTVKENEILTARPETAQRPASTAALPGETAIKQQPVALEVPVTINGARAVEGSDKREPFSETTKTVLIFGN
Ga0137392_108979871	3300011269	Vadose Zone Soil	MPPTAKENETLSARPETARRPASTTTLPGDMAVKQQPVALEVPVTVNGARTVE
Ga0137392_116092402	3300011269	Vadose Zone Soil	MPPTVKENESLTARSGTAQRPASTTTSHADAAIKQQPVALEVPVTVNGAR
Ga0137391_104856912	3300011270	Vadose Zone Soil	MPPTVKENEILATRPEAAQRPAPNTASTEAAIKQQPVALEVPVTVNGA
Ga0137393_110966301	3300011271	Vadose Zone Soil	MPPIAKENEIATGRPETALRPASTAAPSGDAAIKQQPVALEV
Ga0137388_100766981	3300012189	Vadose Zone Soil	MPPTIKESEILTARPETAQRPALTGTLPGDAPIKQQPVALEVSVAVNGVRAVEGSEKREPFSETTKTVL
Ga0137388_107609631	3300012189	Vadose Zone Soil	MPPTVKENESLTARPRTAQRPASTTTSHADAAIKQQPVALEVPVTVNGARTVE
Ga0137388_109895242	3300012189	Vadose Zone Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVTVNGAR
Ga0137383_105125042	3300012199	Vadose Zone Soil	MAPTVKENEISTARLETAQRAASTATLPGEAANKQQPVALEVPVSVNGA
Ga0137382_110165732	3300012200	Vadose Zone Soil	MPPNVKENEILAAKPDTAQRTAPTSTLAGDAAIKQQPVALEVPVTVNGARTVE
Ga0137363_103798511	3300012202	Vadose Zone Soil	MPPIVKENEISTARPETAQRPSSIPALPGDSAIKQQPVALEVPVTINGARTVEGSDKREPFSESTKTVLVFGSG
Ga0137399_101926863	3300012203	Vadose Zone Soil	MPPIAKENQIATARPETAQRPVSTSPGDAAIKPQPVALEVSVTVNGARAVDGSDKREPFSETTKTVLVFGNGAVIR
Ga0137399_106541052	3300012203	Vadose Zone Soil	MPPIVKDAENLTVKPEGAVRAGSGSALPGDSAVKQQPVALEVPVTVNGARAVDGSDKREPFSESTK
Ga0137399_109884432	3300012203	Vadose Zone Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTK
Ga0137399_113043431	3300012203	Vadose Zone Soil	MPPTAKENETLSARPETAQRPASATTLPSDMAIKQQPVALEVPVTINGARTVEGSDK
Ga0137362_115672591	3300012205	Vadose Zone Soil	MPPTVKENESLTARPGTAQRPASTTTSHADAAIKQQPVALEVPVTVNGARTVEGSDKREPFSE
Ga0137362_117485891	3300012205	Vadose Zone Soil	MPPTVKENEILAAKLDTTQRPAPTSALPSDTAIKQQPVALEVPVTVNGARTVEGSDK
Ga0137376_116641691	3300012208	Vadose Zone Soil	MPPTVKENEILAAKPDTVQRPAPTSALPGDVAIKQQPVALEVPVTVNGARTVEGSDKR
Ga0137379_116426422	3300012209	Vadose Zone Soil	MPPIVKENENSTSRPETVQRPSPVPTLPGDSAIKQQPVALEVPVTINGARAVEGSDKREPFSESTKTVLIFGTGAV
Ga0137378_110953962	3300012210	Vadose Zone Soil	MPPTAKEKEISAARPDTAQGPEPNSTLPGDTAVKQQPVALEVPVTVNGARTVEGSDKREPFSETTK
Ga0137377_103583092	3300012211	Vadose Zone Soil	MPPTAKEKEISAAGPDTAQGPAPNSTLPGDTAVKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVLIFGNGTVIRL
Ga0137377_103884042	3300012211	Vadose Zone Soil	MPPTVKENEILAAKPDTAQGPAPTSTQPGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTK
Ga0137377_107182911	3300012211	Vadose Zone Soil	MSPTVKENEILAAKSDTAQRPAPTSALPGDAAIKQQPVALEVPVTVN
Ga0137387_102431702	3300012349	Vadose Zone Soil	MPPTAKEKEISAARPDTEQGPAPNSTLPGDTAAKQQPVALE
Ga0137386_110524752	3300012351	Vadose Zone Soil	MAPTVKENEISTARQRAASTATLPGEAANKQQPVALEVPVSVNGARTVEGS
Ga0137360_100076995	3300012361	Vadose Zone Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVLVIGNGAVIRLSSSVAP
Ga0137361_100064397	3300012362	Vadose Zone Soil	MSPTVKENEILAAKLDTTQRPAPTSALPSDTAIKQQPVALEVPVTVNGARTVEGSEKREPFSETTKTVLVIGN
Ga0137361_112219062	3300012362	Vadose Zone Soil	MPPTAKENETLSARPETAQRPASPTTLPGDMAVKQQPVALEVPVTVNG
Ga0137361_113335832	3300012362	Vadose Zone Soil	MKDAENLTAKPESAARAASGSALPGDSAIKQQPVALEVPVTVNGARAVDGSDKREPFSES
Ga0137358_108062842	3300012582	Vadose Zone Soil	MSPTVKENEILAAKLDTTQRPAPSSALPSDTAIKQQPVALEVPVTVNGARTVEGSEKREP
Ga0137395_110358022	3300012917	Vadose Zone Soil	MPPTVKENESLTARSGTAQRPASTTTSHADAAIKQQPVALEVPVTVNGARTVEGSDKREPFSESTKTVLVFGNGAVI
Ga0137396_104306513	3300012918	Vadose Zone Soil	MSPTVKENEILAAKLDTTQRPAPTSALPSDTAIKQ
Ga0137419_104121531	3300012925	Vadose Zone Soil	MPHTVKDAENLTVKPEGAAHAASNSALPGDSAIKQQPVALEVPVAVNGARAVD
Ga0137419_107071912	3300012925	Vadose Zone Soil	MPPTVKENEILAAKPDTAQRLAPTSALPGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTK
Ga0137419_109115992	3300012925	Vadose Zone Soil	MPPTAKEKEISAARPDTAQSPASTSTSPGDTAVKQQPVALEVPVTVNGARTVEG
Ga0137419_115839711	3300012925	Vadose Zone Soil	MSPTVKENEILAAKLDTTQRPAPTSALPSDTAIKQQPVALEVPVTVNGA
Ga0137416_110761731	3300012927	Vadose Zone Soil	MPPNVKENEILAAKLDTAQRLAPTSALPGDTAIKQQPVALEVPVTVNGARTVEGSDKREP
Ga0137416_111663232	3300012927	Vadose Zone Soil	MSPTAKEKEISVAKPEAAQGPAPTSALPGDSAIKQQPVALEVPVTINGARTVEGSDKREPFSEATKTVLVFGNGA
Ga0137416_119145331	3300012927	Vadose Zone Soil	MPPTVKENDTPTARPEASQRPSSPSTPNGETAVKQQPVALEVPVSVNGARAVEGSDKREPFSESTKTV
Ga0137404_112969831	3300012929	Vadose Zone Soil	MPPTVKENDTPTARPEASQRPSSPSTPNGETAVKQQPVALEVPVSVNGARAVEGSDKREPFSESTKTVLIF
Ga0137404_117278991	3300012929	Vadose Zone Soil	MPHIVKDAENVTVKPEGAAHAASNSALPGDSAIKQQPVALEVPVAVNGARAVDGSDKREPFSE
Ga0137407_114621442	3300012930	Vadose Zone Soil	MPPTVKENEILAAKLDTTQRPAPTSALPSDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVLVIGNGAVIRLSSS
Ga0137418_110144421	3300015241	Vadose Zone Soil	MPPTAKENEILSASPEAAQRPASATTLPSDMAIKQQPVALEV
Ga0137403_1000631211	3300015264	Vadose Zone Soil	MPPSIKENDVSTARPEASQKSSSPSTSNGETAIKQQPVALEVPVSVNGARAVEGSDKREPFSESTKTV
Ga0134073_102581951	3300015356	Grasslands Soil	MPPTAKEKEISAARPDTVQGPAPNSTLPGDTAVKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVLIFG
Ga0066662_108367983	3300018468	Grasslands Soil	MPPSVKDAENLTTKPDSPVRAASGSALPGDSAIKQQPVALEVPVTVNGARAVDGSDKREPFSE
Ga0137408_11351911	3300019789	Vadose Zone Soil	MPPSIKENDVSTARPEASQKSSSPSTSNGETAIKQQPVALEVPVSVNGARAVEGSDKREPFSESSPR
Ga0193756_10592621	3300019866	Soil	MPPTVKENEILAAKPDTAQRPAPTSALAGDTAIKQQPVALEVPVTVN
Ga0179594_100145043	3300020170	Vadose Zone Soil	MPPTVKENEILAAKPDTAQRPAPTSALPGDTAIKQQPVALEVPVTVNGARAVDGSDKR
Ga0210399_115780901	3300020581	Soil	MSSTVKENETASLSPETAVRAAATAALPGEPANRPQPVALEVPVTVNGARTVDGSDKREPFSE
Ga0210401_112140871	3300020583	Soil	MPPIVKENEIATARPESAQRTASTAAPSTEAGIKQQPVALEVPVSVNGARAVDG
Ga0215015_108833811	3300021046	Soil	MPPTVKENEISVARAETGQRSAPAATSSGDAAIKQQPVALEVPVTVNGARTIEGSDKREPFSETSKTCLLYTS
Ga0210404_104768752	3300021088	Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVL
Ga0210400_100179274	3300021170	Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQ
Ga0210400_104460561	3300021170	Soil	MPPTVKENEILTATPETAQRLPSATALSGDSAVKQQPVALEVPVSVNGVRAVEGSEKREPFSETTKTVLVFGNG
Ga0210400_112224011	3300021170	Soil	MPPTVKENEILTAGPETTRPASASALPSDTAVKQQPVALEVPVSVNGVRAVEGSEK
Ga0210408_108218311	3300021178	Soil	MPPTVKENESLTAKPETAQRPGPTSTMAGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVLVIGNGAV
Ga0210408_110907131	3300021178	Soil	MPPIAKENEIETGRPETALRPASTAAPSGDAAIKQQPVALEVPVTVNGARAVDGSEKREPFSESTKTVLIFGNGA
Ga0210402_100540353	3300021478	Soil	MPSTVKENEIQVGGSETAQRPSSTPTLAGDASIKQQPVALEVPVSVNGARTVEGSDKREPFSETTKTVLVFGSGAVIRLA
Ga0210410_103309341	3300021479	Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVT
Ga0210409_101453251	3300021559	Soil	MSPIVKENEISTARPEMAQRPASSATSPGDTAIKQQPVALEVPVSVNGARAMEGSDKREPFSESTKTVLIFGNGAVIRLSS
Ga0137417_12880692	3300024330	Vadose Zone Soil	MPPTAKENENLSASPETAQRPASTTTLPVDMAAKQQPVALEVPVTINGARTVEGSDKREPFSETTKTVLVFGNGA
Ga0137417_13054261	3300024330	Vadose Zone Soil	MPPTAKENENLSASPETAQRPASTTTLPVDMAAKQQPVALEVPVTINGARTVEGSDKREPFSETTKTVLVFGNGAVIRL
Ga0137417_13199701	3300024330	Vadose Zone Soil	MPPTAKENENLSASPETAQRPASTTTLPVDMAAKQQPVALEVPVTINGARTVEGSDKRESLSPRPP
Ga0209803_13067902	3300026332	Soil	MPPTAKEKEISAAGPDTAQGPAPNSTLPGDTAVKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVLIFGNGTVIRLS
Ga0209377_11677031	3300026334	Soil	MPPTVKENEILAARLEAAQRPAPTTSSPDAAIKQQPVALEVPVTINGARALEGSDKREPFSETTK
Ga0257181_10314952	3300026499	Soil	MPPTAKENENLSASPETAQRPASTTTLPGDMATKQQPVALEVPVTINGARTVEGSDKREPFSETT
Ga0179587_101059653	3300026557	Vadose Zone Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVTVNGARTVEGSDKREPFSETTKTVLVIGNGAVIR
Ga0179587_101188541	3300026557	Vadose Zone Soil	MPPSAKENENLSASPETAQRPASTTTLPGDMATKQQPVALEVP
Ga0208365_10582392	3300027070	Forest Soil	MPPIAKENEIATARPESAQRTASTAAPSTEAGIKQQPVALEVPVSVNGARAVDGSDKREPFSES
Ga0207983_10593161	3300027310	Soil	MPPTVKENEIAAAGPETAQRPAPASAAPADASIKQQPVALEVPVTVNGARSVEGGDKREPFSETTKTVLVF
Ga0209076_10367972	3300027643	Vadose Zone Soil	MPPTVKENEILAAKLDTTQRPAPTSALPSDTAIKQQPVALEVPVTVNGARTVEG
Ga0209076_11229962	3300027643	Vadose Zone Soil	MPPTVKENESLTAKPETAQRPGPTSTLAGDTAIKQQPVALEVPVTVNGARTVEGSDK
Ga0209117_10972071	3300027645	Forest Soil	MPPTVKENEILAAKPETAQRPAPTSALPADTAIKQQPVALE
Ga0209517_105765471	3300027854	Peatlands Soil	MPPTVKENELSSAMPETAQRPAPASTSPGDTAIKHQPVALEVPVTVNGARTVEGGDK
Ga0209590_102752642	3300027882	Vadose Zone Soil	MPPTVKEIEILAAKLDTAQRPAPTSALPGDTAIKQQPVALEVPVTVNGARTVEGSDKR
Ga0209583_101138322	3300027910	Watersheds	MPPTVKENEIAVARLETAQRPAPAAGATADTAIKQQPVALEVPVTVNGART
Ga0209526_101920751	3300028047	Forest Soil	MPPTVKENESLTAKPETAQRPALGSTLPGDTAIKQQPVALEVPVTINGARTVEGSDKREPFSETTKTVL
Ga0137415_100285361	3300028536	Vadose Zone Soil	MPPTAKENETLSARPETAQRPASATTLPSDMAIKQQPVALEV
Ga0137415_107811991	3300028536	Vadose Zone Soil	MPPTVKENEILAAKLDTTQRPAPTSALPSDTAIKQQPVALEVPVTVNGARTVEGSDKREPFS
Ga0222749_103354441	3300029636	Soil	MPPTVKENESLTAKPETARPGPTSTLAGDTAIKQQPVALEVPVTVNGARTVEGSDKREP
Ga0307475_111305172	3300031754	Hardwood Forest Soil	MPPSVKENEVLTARPETAQRPASSSGSNGDASIKQQPVALEVPVTVNGARA
Ga0307478_116311581	3300031823	Hardwood Forest Soil	MPPTVKENEIAAAGLETAQRPAPTSIPSADTGFRQQPVALEVPVTVNGARTVEG
Ga0307478_118155441	3300031823	Hardwood Forest Soil	MPPSTKENEIIPATSETAARPTSTLAGDAIKHQPVALEVPVSVNGARTIEG
Ga0307479_100299524	3300031962	Hardwood Forest Soil	MPPSVKGNEVLTARPETAQRPAPTGGSNGDSSIKQQPVALEVPVTVNGARALEGSDKR
Ga0307479_104202641	3300031962	Hardwood Forest Soil	MPPIVKDAENLTAKPQSAARAASGSALPGDSAVKQQPVALEVPVTVNGARAVDGSDKREPFSESTKTVLIFGSGAVI
Ga0307479_114725131	3300031962	Hardwood Forest Soil	MPPIAKENEIETGRPETALRPASTAAPSGDAGIKQQPVALEVPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081727

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences