Metagenome / Metatranscriptome Family F081723

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081723
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	147 residues
Representative Sequence	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNNIPPIKPAYAGKKSAPAPRRDVSGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLEALKANKPSGPGVRQVPAALANDPM
Number of Associated Samples	96
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	96.49 %
% of genes from short scaffolds (< 2000 bps)	93.86 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.965 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.561 % of family members)
Environment Ontology (ENVO)	Unclassified (23.684 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.47% β-sheet: 2.35% Coil/Unstructured: 71.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13620	CarboxypepD_reg	1.75
PF00190	Cupin_1	0.88
PF08450	SGL	0.88
PF01797	Y1_Tnp	0.88
PF07228	SpoIIE	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.88
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.88
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.96 %
Unclassified	root	N/A	14.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.96 %
Unclassified	root	N/A	14.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.96 %
Unclassified	root	N/A	14.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.28 %
Unclassified	root	N/A	14.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	60.53 %
Unclassified	root	N/A	14.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.51 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.53 %
Unclassified	root	N/A	14.04 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.53 %
Unclassified	root	N/A	14.04 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.88 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.53 %
Unclassified	root	N/A	14.04 %
Ornithinimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae	0.88 %
Wenxinia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Wenxinia	0.88 %
Pleomorphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas	0.88 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.53 %
Unclassified	root	N/A	14.04 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.88 %
Wenxinia marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Wenxinia → Wenxinia marina	0.88 %
Serinicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Serinicoccus	0.88 %
Pleomorphomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas oryzae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.53 %
Unclassified	root	N/A	14.04 %
Novosphingobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp.	0.88 %
Serinicoccus profundi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Serinicoccus → Serinicoccus profundi	0.88 %
Wenxinia marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Wenxinia → Wenxinia marina	0.88 %
Pleomorphomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas oryzae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101442044	Not Available	582	Open in IMG/M
3300004092\|Ga0062389_103964629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas oryzae	556	Open in IMG/M
3300005174\|Ga0066680_10964775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005542\|Ga0070732_10550613	Not Available	700	Open in IMG/M
3300005568\|Ga0066703_10633337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Serinicoccus → Serinicoccus profundi	620	Open in IMG/M
3300005610\|Ga0070763_10084498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp.	1576	Open in IMG/M
3300005921\|Ga0070766_11066446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300006052\|Ga0075029_100614830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300006162\|Ga0075030_100889711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300006172\|Ga0075018_10086630	All Organisms → cellular organisms → Bacteria → Proteobacteria	1368	Open in IMG/M
3300006172\|Ga0075018_10447319	Not Available	665	Open in IMG/M
3300006354\|Ga0075021_11131601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300006755\|Ga0079222_11920756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Wenxinia → Wenxinia marina	578	Open in IMG/M
3300006954\|Ga0079219_11488689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300009089\|Ga0099828_10807928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300009090\|Ga0099827_11142250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300009143\|Ga0099792_10687158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300009520\|Ga0116214_1372236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300009522\|Ga0116218_1208813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300009672\|Ga0116215_1153681	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009698\|Ga0116216_10915486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300009824\|Ga0116219_10294629	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300010361\|Ga0126378_10453384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1397	Open in IMG/M
3300010379\|Ga0136449_100649231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1784	Open in IMG/M
3300011120\|Ga0150983_10444113	Not Available	515	Open in IMG/M
3300011120\|Ga0150983_13008611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300011269\|Ga0137392_10196133	All Organisms → cellular organisms → Bacteria → Acidobacteria	1650	Open in IMG/M
3300011270\|Ga0137391_10324971	All Organisms → cellular organisms → Bacteria → Acidobacteria	1324	Open in IMG/M
3300012010\|Ga0120118_1050444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300012189\|Ga0137388_10873770	Not Available	832	Open in IMG/M
3300012203\|Ga0137399_11243516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300012206\|Ga0137380_11324912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300012207\|Ga0137381_11402077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300012210\|Ga0137378_10881851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300012357\|Ga0137384_10188603	All Organisms → cellular organisms → Bacteria → Proteobacteria	1726	Open in IMG/M
3300012362\|Ga0137361_11948838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012363\|Ga0137390_10904676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300012683\|Ga0137398_10578843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300012917\|Ga0137395_10387694	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300012925\|Ga0137419_10483876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300012925\|Ga0137419_11080120	Not Available	668	Open in IMG/M
3300012929\|Ga0137404_10509920	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300014200\|Ga0181526_10538640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300014495\|Ga0182015_10341795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300015054\|Ga0137420_1170301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300015054\|Ga0137420_1270264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300015241\|Ga0137418_10471459	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300017823\|Ga0187818_10104447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300017930\|Ga0187825_10017561	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300017936\|Ga0187821_10073725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300017943\|Ga0187819_10538217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300017943\|Ga0187819_10766670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300017966\|Ga0187776_10256950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300017993\|Ga0187823_10395423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300018006\|Ga0187804_10189059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300018088\|Ga0187771_10918759	Not Available	742	Open in IMG/M
3300018090\|Ga0187770_10957583	Not Available	688	Open in IMG/M
3300020199\|Ga0179592_10292686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300020580\|Ga0210403_10685483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300020580\|Ga0210403_10873992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300020581\|Ga0210399_10125847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2108	Open in IMG/M
3300020581\|Ga0210399_11584991	Not Available	505	Open in IMG/M
3300020582\|Ga0210395_10660208	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300021086\|Ga0179596_10083686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1415	Open in IMG/M
3300021088\|Ga0210404_10111045	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300021088\|Ga0210404_10428348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300021088\|Ga0210404_10558770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300021088\|Ga0210404_10871048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300021151\|Ga0179584_1221397	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300021181\|Ga0210388_10168038	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300021181\|Ga0210388_11041237	Not Available	700	Open in IMG/M
3300021401\|Ga0210393_10405765	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300021407\|Ga0210383_11182289	Not Available	643	Open in IMG/M
3300021420\|Ga0210394_10042528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4001	Open in IMG/M
3300021420\|Ga0210394_10417545	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300021474\|Ga0210390_10215794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1624	Open in IMG/M
3300021474\|Ga0210390_10587126	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300022532\|Ga0242655_10320814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300022724\|Ga0242665_10066774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300022724\|Ga0242665_10316771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300024283\|Ga0247670_1076933	Not Available	609	Open in IMG/M
3300025929\|Ga0207664_10248427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1552	Open in IMG/M
3300026358\|Ga0257166_1060205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300026555\|Ga0179593_1214679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3069	Open in IMG/M
3300027604\|Ga0208324_1166163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300027655\|Ga0209388_1116202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300027667\|Ga0209009_1034273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300027671\|Ga0209588_1275302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300027854\|Ga0209517_10263732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300027867\|Ga0209167_10303677	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300027869\|Ga0209579_10023769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3412	Open in IMG/M
3300027894\|Ga0209068_10065139	All Organisms → cellular organisms → Bacteria → Proteobacteria	1872	Open in IMG/M
3300027898\|Ga0209067_10556163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300027903\|Ga0209488_10973083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300027905\|Ga0209415_10605226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300027905\|Ga0209415_10643397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300027910\|Ga0209583_10352529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300028792\|Ga0307504_10451927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300029943\|Ga0311340_10533795	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300029999\|Ga0311339_10272076	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300031128\|Ga0170823_13115078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300031236\|Ga0302324_100772578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300031708\|Ga0310686_115932885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300031753\|Ga0307477_10110489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1913	Open in IMG/M
3300031753\|Ga0307477_10678987	Not Available	690	Open in IMG/M
3300031754\|Ga0307475_10690964	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300031754\|Ga0307475_11458308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300032160\|Ga0311301_10564733	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300032174\|Ga0307470_10453126	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300032180\|Ga0307471_102574634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300032180\|Ga0307471_103029707	Not Available	596	Open in IMG/M
3300032205\|Ga0307472_101801798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.09%
Aquatic	Environmental → Aquatic	14.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.46%
Freshwater	Environmental → Aquatic → Freshwater	7.89%
Sediment	Environmental → Aquatic → Sediment	7.02%
Peat	Environmental → Terrestrial → Peat	2.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.02%
Loam	Environmental → Terrestrial → Soil → Loam	6.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.02%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.05%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.02%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.02%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.51%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1014420441	3300002245	Forest Soil	MSKCLAVSVVALLAATTLSPVLGAQTAAPKAAGAESKPDTWNSIPPIKPAYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHVALTAPRGQGVEGGRPDETGVMRPLQYTP
Ga0062389_1039646291	3300004092	Bog Forest Soil	MSKRSIVSLAALLAGLAFSPAARAQTAPPSAAGSQPKPEEIWNSIPPTKPQYAGRKSAPAPKRDLSGVWDAAEQDGGRQPSGALEHQALTAPRGQGVEGGRTDETGIMHPLHYTPDGLAALKANKPSGPSVRQVPAALANDPV
Ga0066680_109647751	3300005174	Soil	FSPVLGAQTAPPKAAGQAAKPEKWNSIPPLKAAYAGKKSAPAPRHDISGIWDAAEQDGGRQPSGALEHPALLAPRGQGIEGGRPDETGIMRPLHYTPLGLEALKANKPSGPSVRQVQSALSNDPMDQCDPVGFPRMELYELRTFELVQAANQVICLNQYYGNWRVIW
Ga0070732_105506132	3300005542	Surface Soil	MAKTKSLMASMVALLAGLTLSANLGAQSSPSKAAAPEWKLETWNSVPPIKPYYTGKKSGPAPWRDISGVWDAAEADGGRQPSGALQHPALIKPRGEGIEGGQPDETGIMHPLPYTPA
Ga0066703_106333371	3300005568	Soil	MSKCLAVSVVALFAGLAISPVLGAQSASPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRTIELVQNANQVIYLN
Ga0070763_100844981	3300005610	Soil	MYKRMAISVVALLAGLTLSPILGAQTAPSKAARQEAKPDKWNTLPPIKPAYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALIKPRGEGIEGGQPDETGIMRPLHYTPAGLEALKA
Ga0070766_110664461	3300005921	Soil	MSKCLVVSVVALLAGLTLSPVLGAQTAPPKAAEAKPEKWNSIPPIKPAYAGKKSAPAPRRDLSGIWDAAEADGGRQPSGALEHEALLAPRGEGVEGGRPDETGTMRPLHYTPLGLAALKANKPSGPGVRQVPGALSNDPMDQCDP
Ga0075029_1006148301	3300006052	Watersheds	MSKCPVICTMILFAGLAIPGHLAAQSQSTATAPGDQAKTDKWNSIPPIKPWYAGKKSGPAPKRDISGIWDAAELDGGRQPSGALEHPALTAPRGKGIEGGQEDETGIMKPLHYTPMGLAALKANKPSGPSVRQVPSAMANDPVDQCDPIGFPRMELFELRTIELVQTANQVIYLNQFYGNWRIIW
Ga0075030_1008897111	3300006162	Watersheds	MSKCPVICTMILFAGLAIPGHLAAQSQSTATAPGDQAKTDKWNSIPPIKPWYAGKKSGPAPKRDISGIWDAAELDGGRQPSGALEHPALTAPRGKGIEGGQEDETGIMKPLHYTPMGLAALKANKPSGPSVRQVPSAMANDPVDQ
Ga0075018_100866301	3300006172	Watersheds	MFKRGLFSAIAVFTGLTLSLSLNAQTAPPKAAGAETKPDPWNSIPPIKPAYAGRKSAPAPIRDISGIWDAAEADGGRQPSGALEHPALIKPRGQGVEGGRPDETGIMRPLPFTPAGLEALKANKPSGPSVRQVPS
Ga0075018_104473192	3300006172	Watersheds	MSKSLAFSFVVLLAGLTLSPNLGAQDASPKAGGEQAKPDKWNSIPPIKPAYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGVEGGQPDEAGIMRPLHYTPLGLE
Ga0075021_111316011	3300006354	Watersheds	PKSAVEEAKPDKWNTIPPIKSAYAGKKSGPAPRHDISGIWDAAEADGGRQPSGAIEHVALTAPRGQGVEGGRPDETGVMRPLHYTPAGLEALKANKPSGPSVRQVPAALANDPVDQCDPMGFPRTELYELRTLELAQTANQVIYLNQFYGAWRVIWMDGRELPKDPEPRW
Ga0079222_119207561	3300006755	Agricultural Soil	MSKRLVISIAALLAGLTLCPLLKAQAAPPQAAGENAKPDKWNSIPPIKPAYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRLDETGIMRPLPYTPLGLEALKANKPSGPGVRQVDAALANDPMDQC
Ga0079219_114886891	3300006954	Agricultural Soil	MSKCMVVTVAALFAGLTFSPALGAQTASPKAAVDEPKPEVWNTLPPIKPWYAGKKSGPAPRRDISGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDESGIMHPLPYTPAGLAALKANKPSGPGVRQVPAAL
Ga0099828_108079281	3300009089	Vadose Zone Soil	MSKSLVLSVVALLAGLTFSPVLGAQTAPPKAAGQAAKPEKWNSIPPLKSAYAGKKSAPAPRHDISGIWDAAEQDGGRQPSGALEHPALLAPRGQGIEGGRPDETGIMRPLHYTP
Ga0099827_111422501	3300009090	Vadose Zone Soil	MSKSLVVSVVALLAGLALSPVLGAQTAPPKVAGREAKPEKWNTIPPLKPAYAGKKSAPAPRHDISGIWDAAEQDGGRQPSGALEHPALLAPRGQGVEGGRPDESRIMRPLHYTPLGLEALKANKPSGPGVRQVPAALSN
Ga0099792_106871581	3300009143	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNNIPPIKPAYAGKKSAPAPRRDVSGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLEALKANKPSGPGVRQVPAALANDPM
Ga0116214_13722361	3300009520	Peatlands Soil	TGGISKMSKRLVVSIMAVIAGSTLSPILRAQTAPPTWNDVPPPKSAYVGKKSAPAPRHDLSGIWNAPEADGALQVSGVLEHPALEAPRGQGVEGGRTDETGIMRPLHYTPLGLEALKANKPSGPSVRQVPSVLANDPADSCDPLGFPYMEFWEFRTINLVQTAKQIIILSPFYGNYRVIWTDGR
Ga0116218_12088132	3300009522	Peatlands Soil	MSKRLVVSIMAVIAGSTLSPILRAQTAPPTWNDVPPPKSAYVGKKSAPAPRHDLSGIWNAPEADGALQVSGVLEHPALEAPRGQGVEGGRTDETGIMRPLHYTPLGLEALKANKPSGPSVRQVPSVLANDPADSCDPLGFPYMEFWEFRTINLVQTAKQIIILSPFYGNYRVIWTDG
Ga0116215_11536812	3300009672	Peatlands Soil	MSKRLLISAVVLLAGFTLSPVLRAQTPAHKAAAVAAQPDKWNSLPPIKPFYAGKKPGPAPKRDLSGVWDAAEADGGRQPSGAIEHPALMKPRGQGIEGGQPDETGIMHPLSYTPDGLAAL
Ga0116216_109154861	3300009698	Peatlands Soil	LVISVVALLAGLTLSPVLGAQTAAPKAAAEAKADPWNSIPPIKPAYAGKKSAPAPRRELSGVWDAAEADGGRQPSGAFEHPALMKPRGQGVEGGQPDETGIMNPLHYTPEGLAALKANKPSGPGVRQVPAALTNDPVSQCDPIGFPGMELYELRTFELVQTANQVIFLNQFYGN
Ga0116219_102946291	3300009824	Peatlands Soil	MSKRLVFPVAILLAGFTLSPVLRAQTPAHKAAAVEAQPDKWNSIPPIKPFYAGKKSGPAPKRDLSGVWDAAEADGGRQPSGAIEHPALMKPRGQGIEGGQPDETGIMHPLSYTPEGLAALKANMPSGPGVRQVPG
Ga0126378_104533841	3300010361	Tropical Forest Soil	MTKSLIASIVALLAGLTLAPNLGAQSAQSKAAGADWKLETWNSVPPIKPYYVGKKSGPAPKRDISGVWDAAEADGGRQPSGALEHVALQKPRGQGVEGGQLDETGIMHPLPYTPAGLEALKANKPSGPGVRQVDAA
Ga0136449_1006492312	3300010379	Peatlands Soil	MSKRLEVSLVTLLAGLTLSPIARAQTAPSSAAGNQAKPAIWDSIPPIKPSYAGKKSAPAPIRDISGIWDAAEADGGRQPSGALEHPALTAPRGQGVEGGRTDETGIMRPLHYTPAGLEALKANKPSGPSVRQVPAALANDPVDQCDPMGVPRMELYELRTIELA
Ga0150983_104441131	3300011120	Forest Soil	MFKHLVVPAVALFVGLSLSPALLAQSDAPTAPAAQAKPDQWNSIPPTKPQYAGRKAAPAPIRDISGVWDAAELDGGRQPSGALEHPALTKPRGQGVEGGQPDETGIMRPLHYTPAGLEALKANK
Ga0150983_130086111	3300011120	Forest Soil	MEIAGGISEMSRSLMVSVVALLAGLSLSPVLGAQTASSKAAVEQAKPDKWNSIPPIKPAYAGKKSAPAPRRDISGIWDATEEDGGRQPSGALEHPALEAPRGQGVEGGRPDESHIMRPLQYTPLGLDALKSHKPSGPGVRQVPAALANDPMDQCDPVGFPRMQLYEL
Ga0137392_101961333	3300011269	Vadose Zone Soil	MVVSVVALLAGLTISPVLGAQTAAPKAAGEEAKPEKWNNIPPIKSAYAGKKPAPAPRHDISGIWDAAEADWGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLLYTPLGLEALKAN
Ga0137391_103249711	3300011270	Vadose Zone Soil	MMVSAIALLAGLTISPVLGAQTAAPKAAGEEAKPEKWNNIPPIKSAYAGKKPAPAPRHDISGIWDAAEADGGRQPSGAIEHPALEAPRGQGVEGGRPDETGIMHPLLYTPLGLEALKANKPSGPGVRQVSAA
Ga0120118_10504442	3300012010	Permafrost	MSKCLVVSAIALLAGLTLSPVLGAQSAPPKAAGEEAKPDKWNSIPPIKPAYAGKKSAPAPRRDLNGIWDAAEADGGRQPSGALEHPALMAPRGQGIEGGQPDETGIMRPLHYTPLGLEALKANKPS
Ga0137388_108737701	3300012189	Vadose Zone Soil	MSKSLVLSVVALLAGLTFSPVLGAQTAPPKAAGQAATPEKWNSIPPLKSAYAGKKSAPAPRHDISGIWDAAEFDGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLAALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRTIQLVQTANQVIYLNQYYGNWRVIWTDRRELPKDPEPRWNGYSVGKWVDDYTFVVETVGLDPRT
Ga0137399_112435162	3300012203	Vadose Zone Soil	MSKRLVVSMVALLAGLTFSLILRAQTAPSKWNNVPPPKSAYAGKKSAPAPRRDISGIWDAAEADGALQVSGVLEHPALEAPRGQGVEGGRPDESGIMRPLHYTPLGLEALKANRP
Ga0137380_113249121	3300012206	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRT
Ga0137381_114020771	3300012207	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLQALKA
Ga0137378_108818511	3300012210	Vadose Zone Soil	MSKCLVISVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPF
Ga0137384_101886031	3300012357	Vadose Zone Soil	MSKRLVVSVVALLAGLTLSSVLGAQTAPSKAAGEEGNPDKWNSIPPIKPAYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALMAPRGQGVEGGQPDEKGIMRPLHYTPLGLEALKANKPSGPGVRQVPAA
Ga0137361_119488381	3300012362	Vadose Zone Soil	VVALLAGLILSPALGAQTAPAKAAGEEAKPDKWNSIPPIKPAYAGKKPAPAPRRDISGTWDAAEADGGRQPSGALEHVALTAPRGQGVEGGRPDETGIMRQLQYTALGLEALKANKPSGPSVRQVPAALANDPLDQCDPIGFPRMELYELRTIELVQSAHQVIYLNQ
Ga0137390_109046761	3300012363	Vadose Zone Soil	MVVSVVALLAGLTISPVLGAQTAAPKAAGEEAKPEKWNNIPPIKSAYAGKKPAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLLYTPLGLEALKANKPSGPGVRQVTAALANDPMDQCDPIGFPRME
Ga0137398_105788431	3300012683	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRTIELAQTA
Ga0137395_103876942	3300012917	Vadose Zone Soil	MSKCLVVSVIALLAGLTLSPVLGAQTAPPKAAGEQAKPEKWNNIPPIKPAYAGKKSAPAPRRDVSGIWDAAEEDGGRQPSGAIEHPALEAPRGQGVEGGRPDESRIMRPLHYTPLGLEALKANKPSGPGVRQVPAALSNDPMDQCDP
Ga0137419_104838761	3300012925	Vadose Zone Soil	MSKRLVVSMVILVAGLTFSMILRAQTAPSKWNNVPPLKSAYVGKKSAPAPRRDISGIWDAAEADGALQVSGVLEHPALEAPRGQGIEGGRPDESGILRPLHYTPLGLEALKANRPSGPSVRQVPAALANDPADTCDPLGLPYME
Ga0137419_110801201	3300012925	Vadose Zone Soil	MVVSVVALLAGLTLSPVLGAQTTPPKAAVEQAKPDKWNSIPPIKPAYAGKKSAPAPRRDISGIWDAAEEDGGRQPSGALEHPALEAPRGQGVEGGRPDESHIMRPLQYTPLGLETLKAHKPSGPGVRQVPA
Ga0137404_105099202	3300012929	Vadose Zone Soil	MSKCSVISVVALLAGLILSPALGAQTAPAKAAGEEAKPDKWNSIPPIKPAYAGKKPAPAPRRDISGTWDAAEADGGRQPSGALEHVALTAPRGQGVEGGRPDETGIMRPLQYTPAGLEAL
Ga0181526_105386401	3300014200	Bog	MSKRSVFSVMVMLAGLILAPYLDAQTAPSTAAGDQAKPGEWNSIPPTKPQYAGRKSGPAPKRDISGVWDAAELDGGRQPSGALEHPALTAPRGQGVEGGRPDETGIMRPLHYTPDGLAALKANKPSGPSVRQVPAALANDPVDQCDPIGFPRMELYELRTIELAQTANQVIYLNQFYGNYRIIWTDGRELPKDPD
Ga0182015_103417952	3300014495	Palsa	MDRIETVGGIFEMYKRSVVSEFALLAGLTFSSCLAAQTASPNVAGDQAKADKWNSIPPIKPSYAGKKSAPAPRRDLSGIWDAAELDGGRQPSGSLEHPALTAPRGQGVEGGRPDETGIMRPLHYTPMGLEALKANKPSGPSVRQVPAALANDPVDQCDP
Ga0137420_11703011	3300015054	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGF
Ga0137420_12702641	3300015054	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLEALKANKPSG
Ga0137418_104714591	3300015241	Vadose Zone Soil	MVVSVVALLAGLTLSPVLGAQTTPPKAAVEQAKPDKWNSIPPIKPAYAGKKSAPAPRRDISGIWDAAEEDGGRQPSGAIEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKAHKPSGPGVRQVPAALAN
Ga0187818_101044473	3300017823	Freshwater Sediment	MSKFPVVTVIALLAGLGLSPALPAQTAAPKAAADEPKPDLWNTIPPVKPAYAGKKSAPAPRRDLSGVWDAAELDGGRQPGGAIEHPAMIKPRGQGVEGGQPDETGIMHPLPYTAEGLAALKANKPSGPGVRQVPAALS
Ga0187825_100175611	3300017930	Freshwater Sediment	MFKRMAIPLMILAAGLMLSPVLWAQAQTSASRSGSESGAQSGKTEWKPEVWNTVPPIKPYYAGRKSGPAPKRDISGVWDAAEADGGRQPSGALEHPALIKPRGQGVEGGQPDETGIMHPLPYTPDGLAALKENKPSGPGVRQVPAALTNDPMDLCDPIGFPRMELYELRT
Ga0187821_100737251	3300017936	Freshwater Sediment	MMKRVAIPLIALAAGLALSPVLHAQAQSAAPESGSGKVEWKPDLWNTVPPIKPYYAGKKSGPAPKRDLSGVWDAAEADGGRQPSGAIEHPALIKPRGQGIEGGQPDETGIMHPLPYTPEGLAALKENKPSGPGVRQVPAALTNDPMDMCDPVGFPRMELYELRTIELVQT
Ga0187819_105382171	3300017943	Freshwater Sediment	MSNCLVVSLVALLAGFTLSPTLGAQTAAPKAAGEQAKPDKWNTIPPIKPAYAGKKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALMAPRGQGVEGGQPDETGIMRPLHYTPLGLEALKANKPSGPGVRQVPAALSNDPMDQCDPI
Ga0187819_107666701	3300017943	Freshwater Sediment	EMSKRFVISVVALIAGLALSPVVGAQNASPKAGAEAKPDKWNSIPPIKPFYAGKKSGPAPKRDLSGVWDAAEADGGRQPSGALEHPALMKPRGQGIEGGQPDETGIMHPLQYTPAGLEALKANKPSGPGVRQVPASLSNDPMDQCDPIGFPRMELYELRTFELVQNANQVIYLNQYFGNF
Ga0187776_102569502	3300017966	Tropical Peatland	MIKRVAISLMALAAGLALPPVLRAQAQTEASKSGKVEWKPELWNTVPPIKPYYEGRKSGPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLPYTPEGLAALKENKPSGPGVRQVPAALTNDPMDMCDP
Ga0187823_103954231	3300017993	Freshwater Sediment	MMKRVAIPLIALAAGLALSPVLHAQAQSAAPESGSGKVEWKPDLWNTVPPIKPYYAGKKSGPAPKRDLSGVWDAAEADGGRQPSGAIEHPALIKPRGQGIEGGQPDETGIMHPLPYTPEGLAALKDNKPSG
Ga0187804_101890591	3300018006	Freshwater Sediment	MSKRLVVSMIAVIAGSTFSPILRAQTAPPKWNDVPPPKSAYVGKKSAPAPRHDLSGIWNAPEADGALQVSGVLEHPALEAPRGQGVEGGRTDETGIMRPLHYTPLGLEALKANKPSGPSVRQVPAVLANDPADQCDPLGFPYMEFWEFRTINLVQTAKQVVL
Ga0187771_109187592	3300018088	Tropical Peatland	MSKRLVVSIVALLAGLTFSPVLGAQTAPPKPAGEEAKPDPWNSIPPIKPSYAGKKSAPAPRRDISGIWDAAEDDGGRQPRGAFEHPALLPPRGQGIEGGRPDETGIMRPLHYTPLGLEALKANKPSGPSVRQVTAALANDPLDQCDPI
Ga0187770_109575832	3300018090	Tropical Peatland	MSKRLVVSIVALLAGLTFSPVLGAQTAPPKPAGEEAKPDPWNSIPPIKPSYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHPALLAPRGQGIEGGRPDETGIMRPLHYTPL
Ga0179592_102926861	3300020199	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYE
Ga0210403_106854832	3300020580	Soil	MFKRALFPVFTLLAGLTLSPVLGAQTAAPNAAGKEAKADKWNSIPPIKPSYAGKKSAPAPRRNLSGVWDAAEADGGRQPSGALEHPALMAPRGQGIEGGQPDETGIMHPLHYTPEG
Ga0210403_108739922	3300020580	Soil	MHTRLAVLVVALLAALGFSSAPRAQSASSNSSPAPSATQAQPDKWNSIPPIKPWYAGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLLYTPAGLEALKANKPSGP
Ga0210399_101258471	3300020581	Soil	MHTRLAVLVVALLAALGFSSAPRAQSASSNSSPAPSATQAQPDKWNSIPPIKPWYSGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLLYTPAGLEALKANKPSGPGVRQVPAALSNDPMDKCDPVGFPRMELYELRTV
Ga0210399_115849911	3300020581	Soil	MSKRLWVSVVALLAGLTFSPLLGAQTAPSKAAADSAKPDKWNSIPPVKTAYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHTALMKPRGEGIEGGQPDETGIMHPLHYTPMGLEA
Ga0210395_106602081	3300020582	Soil	MMKRMAISLIALAAGLALASAPRAQAQNAAPDSGSKAGSQSGKVEWKPELWNSNPPIKPYYAGRESGPAPKRDLSGVWDAAEADGGRQPSGANEHPALIKPRGQGIEGGQPDETGIMHPLPYTPEGL
Ga0179596_100836861	3300021086	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPSYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLEALKANKPSGPGVRQVPAALANDPMDQCDPIGFPRMELYELRTIELVQNANQVIYLNQYF
Ga0210404_101110451	3300021088	Soil	MYKRMAISVVALLAGLTLSPILGAQTAPSKAAGQEAKPDKWNTLPPIKPAYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALIKPRGEGIEGGQPDETGIMRPLHYTPAGLEALKANKPSGPGVRQVPAALSNDPMDQ
Ga0210404_104283481	3300021088	Soil	MSKPLVVSVVALLAGLTVSPVLGAQTAPPKAAGQEAKPEKWNSIPPIKTAYAGKKSAPAPRRDISGIWDAAEQDGGRQPSGALEHPALLAPRGQGLEGGLPDETGIMRPLHYTPLGLEALKANKPSGP
Ga0210404_105587702	3300021088	Soil	MHTRLAVLVVALLAALGFSSAPRAQSASSNSSPAPSATQAQPDKWNSIPPIKPWYAGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETG
Ga0210404_108710481	3300021088	Soil	TLSPVLGAQTAPTKTPGEEAKPEVWNTIPPIKPWYAGKKSGPAPPRDISGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLPYTPAGVAALKANKPSGPGVRQVPAALTNDPVSQCDPIGFPGMQLYELRTIELVQTANQVIYLNQFYGNFRIIWTDG
Ga0179584_12213972	3300021151	Vadose Zone Soil	MAKWLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNNIPPIKPAYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKANKPSGPGVRQVP
Ga0210400_107467661	3300021170	Soil	MSKCLAVSAVAVLAGITLCPILGAQTAASKTAGAEAQPDKWNSTPPIKPAYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHVALTAPRGQGVEGGRPDETGIMHPLQY
Ga0210396_108015261	3300021180	Soil	MHTRLAVLVVALLAALGFSSAPRAQSASSNSSPAPSATQAQPDKWNSIPPIKPWYSGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPD
Ga0210388_101680381	3300021181	Soil	MSIRLVISVVAVMAGIALAPQLGAQASAPQAAPDKWNSIPPIKPWYAGKKSGPAPKRDISGVWDAAEADGGRQPSGALEHPALTAPRGQGVEGGRPDETGIMKPLHYTPEGLEALKANKPSGPSVRQVPA
Ga0210388_110412371	3300021181	Soil	MTPGGILEMNKCKTVAAVILLAGMALSLDARAQSAPSKSSPEQATPETWNSTPPIKPSYAGKKSAPAPKRDISGIWDAAEADGGRQPSGALEHPALIKPRGQGVEGGQPDETGIMRPLHYTPAGLEALKANKPSGPSVRQVPAAAANDPLDQCDPISFP
Ga0210393_104057651	3300021401	Soil	VRRSGVNDGGGILEMNKCKTVAAVILLAGMALSLDARAQSAPSKSSPEQATPETWNSTPPIKPSYAGKKSAPAPKRDISGIWDAAEADGGRQPSGALEHPALIKPRGQGVEGGQPDETGIMRPLHYTPAGLEALKANKPSGPSVRQVPAAAANDPLDQCDPISF
Ga0210383_111822892	3300021407	Soil	MSKRVLFPAVALIAGLTFSPVLGAQTTPSKAAAEVSKPDPWNSIPPIKPSYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLLYTPL
Ga0210394_100425281	3300021420	Soil	MHTRLAVLVVALLAALGFSSAPRAQSASSNSSPAPSATQAQPDKWNSIPPIKPWYSGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLLYTPAGLEALKANKPSGPGVRQVPAALSNDPMDKCDPVGFPRMELYELRTIE
Ga0210394_104175451	3300021420	Soil	MSKRVLFPAVALIAGLTFSPVLGAQTTPSKAAAEVSKPDPWNSIPPIKPSYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLLYTPLGLEALKANKPSGPGVRQVPAAIANDPV
Ga0210390_102157943	3300021474	Soil	MPKRLLVPVLALLAVLTLSSVLRAQSAAPGPSSTPSATQAPPDKWNSIPPIKPWYAGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMRPLQYTPAGLEALKANKPSGPGVRQVPAALSNDPMDQCDPVGFPRMELYELRTIELVQNASHVIYLNQY
Ga0210390_105871262	3300021474	Soil	MHKRLAVPVLALLAALMLTSALHAQNASSNPSSSPSAIQAPPDKWNSIPPIKPWYAGRKSGPAPKRDISGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDE
Ga0242655_103208141	3300022532	Soil	ALLAVLTLSSVLRAQSAAPGPSSTPSATQAPPDKWNSIPPIKPWYAGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMRPLHYTPAGLEALKANKPSGPGVRQVPASISNDPMDQCDPVGFPRMELYELRTFQLLQNAHQVVYLNQ
Ga0242665_100667741	3300022724	Soil	MSKCLVVSVVALLAGLTLSPVLGAQTAPPKAAVEEAKPEKWNSIPPIKPAYAGKKSAPAPRRDLSGIWDAAEADGGRQPSGALEHEALLAPRGEGVEGGRPDETGTMRPLHYTPLGLAALKANKPSGPSVRQVPGALSND
Ga0242665_103167711	3300022724	Soil	MSKRLVASVVAMLAGLTLSPVLGAQTAATKAAGDEPKPDVWNTIPPIKPFYAGRKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALMKPRGQGIEGGQPDETGIMHPLQYTPEGLAALKANKPSGPGVRQVPA
Ga0247670_10769331	3300024283	Soil	MLKHIMLPASIMLAVLALSPVARAQSAAPASAPQAAKPDKWNSIPPIKPWYAGKKSAPAPIRDLTGIWDAAEADGGRQPSGALEHPALIKPRGQGVEGGQPDETGIMHPLLYTPLGLEALKANKPS
Ga0207664_102484274	3300025929	Agricultural Soil	MSKRLVFSVVALVAGLALSPLLGAQTAPPKAAEEEAKPDKWNSIPPIKSAYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMHPIPYTPLGLEALKANKPSGPGVRQVDAA
Ga0257166_10602051	3300026358	Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRTIELAQTANQVIYLNQYF
Ga0179593_12146792	3300026555	Vadose Zone Soil	MSKCLVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDVSGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPLGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRTIELAQTANQVIYLNQYFGNWRTIWTDGRALPRTRSRGLTDTPSENGWTTTRSWSRRSG
Ga0208324_11661631	3300027604	Peatlands Soil	MSKRLVVSIMAVIAGSTLSPILRAQTAPPTWNDVPPPKSAYVGKKSAPAPRHDLSGIWNAPEADGALQVSGVLEHPALEAPRGQGVEGGRTDETGIMRPLHYTPLGLEALKANKPSGPSVRQVPSVLANDPADSCDPLGFPYMEFWEFRTINLVQT
Ga0209388_11162021	3300027655	Vadose Zone Soil	MSKCSVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRTIELAQT
Ga0209009_10342731	3300027667	Forest Soil	MSKCLVVSVVALLAGLTLSPVVGAQTASSNATGNQAKPDPWNSIPPIKPLYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLQYTPAGLEALKANKPSGPGVRQVPAALTND
Ga0209588_12753021	3300027671	Vadose Zone Soil	CSVVPVVALLAGLAISPVLGAQTAAPKAAGEEAKPEKWNSIPPIKPAYAGKKSAPAPRHDISGIWDAAEADGGRQPSGALEHPALEAPRGQGVEGGRPDETGIMRPLQYTPFGLEALKANKPSGPGVRQVPAALANDPMDQCDPVGFPRMELYELRTIELAQTANQVIY
Ga0209517_102637322	3300027854	Peatlands Soil	MSKRLVFPVAILLAGFTLSPVLRAQTAAHKAAAVEAHLDKWNSLPPIKPFYAGKKSGPAPKRDLSGVWDAAEADGGRQPSGAIEHPALMKPRGQGIEGGQPDETGIMHPLSYTPEGLAALKANKPSGPGVRQVPASLSNDPMDQCDPIGFPRMELYELRTFELLQNANQVVYLNQYFGNFRVIWTD
Ga0209167_103036772	3300027867	Surface Soil	MSKRLPVLAMVLVAGLALSYDLRAQSAPQAASGAESKPAAWDSIPPIKPSYAGKKSAPAPRRDISGIWDAAEADGGRQPSGALEHPALLKPRGQGIEGGRPDESGIMRPLQYTPDGLEALKANKPSGPSVRQVPATLAND
Ga0209579_100237691	3300027869	Surface Soil	MSKRLVVSVVTLLAGLTFSSAVHAQTASPSATADQSKPATWDSIPPIKPYYAGKKSAPAPKRDISGIWDAAEADGGRQPSGALEHPALTAPRGQGVEGGRTDETGIMRPLHYTPAGLEALKANKPSGPSVRQVPAALANDPVDQCDPMGVPRMELYELRTIELAQTANQVIYLNQFYGGW
Ga0209068_100651393	3300027894	Watersheds	LETIKCAMLTVVALLTGLTFSPIAGAQSTQPKAAGEATKPETWNSIPPIKPSYAGKKSAPAPRRDLSGIWDAAEQDGGRQPSGALEHQALTAPRGQGVEGGRPDETGIMRPLHY
Ga0209067_105561631	3300027898	Watersheds	MPKRSLVSLVALFAATMISPVAGAQTAQTKAGEEQQSNPRTWDSIPPIKPWYAGRKSAPAPKRDLSGIWDAAEQDGGRQPSGALEHQALTAPRGQGVEGGRPDETGIMRPLHYTPMGLEALKANKPSGPSVRQVPAALANDPVDQCDPVGFPRMEL
Ga0209488_109730831	3300027903	Vadose Zone Soil	MSKCLVVSVIALLAGLTLSPVLSAQTAPRKAAGEQAKPEKWNNIPPIKPAYAGKKSAPAPRHDVSGIWDAAEEDGGRQPSGAIEHPALEAPRGQGVEGGRPDESRIMRPLHYTPLGLEALKANKPSGPGVRQVPAALSNDPMDQCDPVGFPRMELYELRTIQLVQTAN
Ga0209415_106052261	3300027905	Peatlands Soil	MSKRLVFPVAILLAGFTLSPVLRAQTPAHKAAAVEAQPDKWNSIPPIKPFYAGKKSGPAPKRDLSGVWDAAEADGGRQPSGAIEHPALMKPRGQGIEGGQPDETGIMHPLSYTPEGLAALKANMPSGPGVRQVPGSLSNDPMDQCDPIGFPRMELYELRTFELLQNANQVVYLNQYFGNFRVIWTDGRELPKDPE
Ga0209415_106433971	3300027905	Peatlands Soil	MSKRLVISVVALLAGLTLSPVLGAQTAAPKAAAEAKPDPWNSIPPIKPAYAGKKSAPAPRRELSGVWDAAEADGGRQPSGAFEHPALMKPRGQGVEGGQPDETGIMNPLHYTPEGLAALKANKPSGPGVRQVPAALTNDPVSQCDPIGFPGMELYELRTFELVQTANQVIFLNQFYGN
Ga0209583_103525291	3300027910	Watersheds	MSKRLVVSMVALIAGLMFSLILRAQTAPPKWNNVPPPKSTYVGKKSAPAPRHDLSGIWNAAEADGALQVSGVLEHPALEAPRGQGVEGGRPDETGIMRPLHYTPLGLEALKANKPSGPSVRQVPAVLANDPADSCDPLGFPYMEFWEFRTIDVVQTAKQVVLLSPFYGNY
Ga0307504_104519271	3300028792	Soil	MSKRVLFSVVALLAGLTLSPVLGAQTAPPKAAGAEAKPDKWNSIPPIKTAYAGKKSAPAPRRDLSGIWDAAESDGGRQPSGAFEHPALMAPRGQGIEGGQPDETGILHPLHYTPEGLAALKANKPSGPGVRQVPASLSNDPMDQCDPIG
Ga0311340_105337951	3300029943	Palsa	MYKRLIVSVVFLLAGLALSSGARAQSAAPSVAGSQPKPEEIWNSIPPTKPQYAGRKSAPAPKRDLSGVWDAAELDGGRQPSGALEHPALTAPRGQGVEGGRTDEAGIMRPLHYTPDGLAGLKANKPSGPSVRQVP
Ga0311339_102720761	3300029999	Palsa	MYKRLIVSVVFLLAGLALSSGARAQSAAPSVAGSQPKPEEIWNSIPPTKPQYAGRKSAPAPKRDLSGVWDAAELDGGRQPSGALEHPALTAPRGQGVEGGRTDEAGIMRPLHYTPDGLAGLKANKPSGPSVRQVPAALANDPVDQCDPIGFP
Ga0170823_131150781	3300031128	Forest Soil	MSKRLVVSVVALFAGLTLSPVLGAQSSPSKAAGEEAKPDKWNTIPPIKPFYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGALEHPALTKPRGQGIEGGQPDETGIMHPLSYTPAGLEALKANKPSGPGVRQEK
Ga0302324_1007725782	3300031236	Palsa	MYKRLIVSVVFLLAGLALSSGARAQSAAPSVAGSQPKPEEIWNSIPPTKPQYAGRKSAPAPKRDLSGVWDAAELDGGRQPSGALEHPALTAPRGQGVEGGRTDEAGIMRPLHYTPDGLAGLKANKPSGPSVRQVPAALANDPVDQCDPIGFPRMELYELRTIELVQNANQVIYLNQFYGNYRIIWTDGRELPADPDPRWNG
Ga0310686_1159328851	3300031708	Soil	MSKRLVVSVVALLAGLTLSPIVGAQTAAPKAAGEEAKPDKWNTIPPIKPAYAGKKSAPAPRRDLSGVWDAAEADGGRQPSGAIEHPALIKPRGQGVEGGQPDETGIMHPLHYTPLGLEALKANKPSGPGV
Ga0307477_101104891	3300031753	Hardwood Forest Soil	MTKRLMASMVALLAGLTLSANLGAQSSPSKAAAPEWKLETWNSVPPIKAYYTGKKSGPAPKRDISGVWDAAEADGGRQPSGALEHPALQKPRGQGVEGGQPDETGIMHPLPYTPAGLEALKANKPSGPGVRQVDAALSNDPMDACDPVGFPRMELYELRTIELLQ
Ga0307477_106789872	3300031753	Hardwood Forest Soil	MYTRLAVVVVALIAALGLSPALRAQSASSNSSSTPSSTQAQPDKWNSIPPIKPWYAGRKSAPAPKRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLLYTPAGLEA
Ga0307475_106909641	3300031754	Hardwood Forest Soil	MSKRLVVSVVALLAGLTLSPILGAQTAPTKATAETKPEKWNSIPPIKPFYAGKKSASAPRRDLSGVWDAAEADGGRQPSGALEHPALIKPRGQGVEGGQPDETGIMHPLLYTP
Ga0307475_114583081	3300031754	Hardwood Forest Soil	MTKRLMASMVALLAGLTLSANLGAQSSPSKAAAPEWKLETWNSVPPIKPYYTGKKSGPAPKRDISGVWDAAEADGGRQPSGALEHPALQKPRGQGVEGGQPDETGIMHPLPYTPAGLEALKANKPSGPGVRQVDAALSNDPMDACDPVGFPRMELYELRTIELLQTANQV
Ga0311301_105647332	3300032160	Peatlands Soil	MSKRLEVSLVTLLAGLTLSPIARAQTAPSSAAGNQAKPAIWDSIPPIKPSYAGKKSAPAPIRDISGIWDAAEADGGRQPSGALEHPALTAPRGQGVEGGRTDETGIMRPLHYTPAGLEALKA
Ga0307470_104531261	3300032174	Hardwood Forest Soil	MSKHLVFSALIIFAGLAVSPAPRAQTASSASAPQPTSPDKWNSIPPIKPWYTGRKSAPAPVRDISGIWDAAEADGGRQPSGALEHPALIKPRGQGVEGGQPDETGIMHPLLYTPSGLEALKANKPSGPSV
Ga0307471_1025746341	3300032180	Hardwood Forest Soil	AASTGTGLSQPDMLFRDLSYGWIREIRIEAAGGVLEMSKSMVFSVVALLAGLTLSPVLGAQTAPTKTPGEEAKPEVWNTIPPIKPWYAGKKSGPAPPRDISGVWDAAEADGGRQPSGALEHPALIKPRGQGIEGGQPDETGIMHPLPYTPAGVAALKANKPSGPGVRQVPAALTNDPVSQCDPIGFPGMELYELRTIELVQTANQVIYLNQFYG
Ga0307471_1030297071	3300032180	Hardwood Forest Soil	MSKCSVISVVALLAGLMLSPALGAQTAAPKAAGGEAKPDKWNSIPPIKPAYAGKKSAPAPRRDISGTWDAAEADGGRQPSGALEHVALTAPRGQGVEGGRPDETGIMRPLQYTPAGLEALKANKPSGPSVRQVP
Ga0307472_1018017981	3300032205	Hardwood Forest Soil	MSKRLVVSMVALIAGLMFSLNLRAQTAPPKWNNVPPPKSTYVGKKSAAAPRHDLSGIWNAAEADGALQVSGVLEHPALEAPRGQGVEGGRPDETGIMHPLHYTPLGLEALKANKPSGPSIRQVPAAFSNDPADHCDPLGFPYMEFWEFRTIDLVQTANQVVLLSPFYGNYRVIWTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081723

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences