Metagenome Family F081601

Basic Information
Family ID	F081601
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	61 residues
Representative Sequence	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Number of Associated Samples	98
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.46 %
% of genes near scaffold ends (potentially truncated)	21.93 %
% of genes from short scaffolds (< 2000 bps)	70.18 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (75.439 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (18.421 % of family members)
Environment Ontology (ENVO)	Unclassified (28.070 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.228 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.65% β-sheet: 0.00% Coil/Unstructured: 69.35%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01738	DLH	57.02
PF13378	MR_MLE_C	21.93
PF01425	Amidase	2.63
PF07729	FCD	1.75
PF01979	Amidohydro_1	1.75
PF13649	Methyltransf_25	1.75
PF07883	Cupin_2	0.88
PF07978	NIPSNAP	0.88
PF00561	Abhydrolase_1	0.88
PF00392	GntR	0.88
PF13518	HTH_28	0.88
PF12779	WXXGXW	0.88
PF00005	ABC_tran	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	2.63
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.75
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.44 %
Unclassified	root	N/A	24.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.44 %
Unclassified	root	N/A	24.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.44 %
Unclassified	root	N/A	24.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.58 %
Unclassified	root	N/A	24.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.28 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003324\|soilH2_10021486	All Organisms → cellular organisms → Bacteria → Proteobacteria	12079	Open in IMG/M
3300004114\|Ga0062593_100063691	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300005331\|Ga0070670_100006635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9812	Open in IMG/M
3300005338\|Ga0068868_100101196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2332	Open in IMG/M
3300005341\|Ga0070691_10017920	All Organisms → cellular organisms → Bacteria	3260	Open in IMG/M
3300005406\|Ga0070703_10087121	Not Available	1076	Open in IMG/M
3300005436\|Ga0070713_102192282	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005440\|Ga0070705_100045523	All Organisms → cellular organisms → Bacteria → Proteobacteria	2524	Open in IMG/M
3300005445\|Ga0070708_100490073	Not Available	1159	Open in IMG/M
3300005445\|Ga0070708_101040124	Not Available	767	Open in IMG/M
3300005445\|Ga0070708_101047474	Not Available	764	Open in IMG/M
3300005467\|Ga0070706_100043901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4129	Open in IMG/M
3300005467\|Ga0070706_100105385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2623	Open in IMG/M
3300005467\|Ga0070706_100422580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1240	Open in IMG/M
3300005468\|Ga0070707_100547480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1119	Open in IMG/M
3300005468\|Ga0070707_100921558	Not Available	838	Open in IMG/M
3300005468\|Ga0070707_101095552	Not Available	762	Open in IMG/M
3300005471\|Ga0070698_100001489	All Organisms → cellular organisms → Bacteria → Proteobacteria	26007	Open in IMG/M
3300005471\|Ga0070698_100025016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6223	Open in IMG/M
3300005545\|Ga0070695_101153869	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005557\|Ga0066704_10745557	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005559\|Ga0066700_10582992	Not Available	780	Open in IMG/M
3300005618\|Ga0068864_100019375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5689	Open in IMG/M
3300005875\|Ga0075293_1001980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1760	Open in IMG/M
3300005875\|Ga0075293_1060314	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005876\|Ga0075300_1010064	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005878\|Ga0075297_1003911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1248	Open in IMG/M
3300005883\|Ga0075299_1000473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1668	Open in IMG/M
3300005884\|Ga0075291_1063351	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005985\|Ga0081539_10127661	Not Available	1254	Open in IMG/M
3300006041\|Ga0075023_100133145	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300006050\|Ga0075028_100661442	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006175\|Ga0070712_101241762	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300006804\|Ga0079221_10058955	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300006854\|Ga0075425_100085811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3565	Open in IMG/M
3300006854\|Ga0075425_103167743	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006903\|Ga0075426_10305779	Not Available	1163	Open in IMG/M
3300006903\|Ga0075426_10786260	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300006904\|Ga0075424_100249171	All Organisms → cellular organisms → Bacteria → Proteobacteria	1888	Open in IMG/M
3300007076\|Ga0075435_100028812	All Organisms → cellular organisms → Bacteria → Proteobacteria	4356	Open in IMG/M
3300007255\|Ga0099791_10572197	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300007258\|Ga0099793_10317743	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300009088\|Ga0099830_10278949	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300009088\|Ga0099830_10413464	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300009090\|Ga0099827_10160800	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300009156\|Ga0111538_12711852	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300009808\|Ga0105071_1082600	Not Available	562	Open in IMG/M
3300009814\|Ga0105082_1064557	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009820\|Ga0105085_1025760	Not Available	1027	Open in IMG/M
3300009821\|Ga0105064_1012310	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300010159\|Ga0099796_10389964	Not Available	609	Open in IMG/M
3300010362\|Ga0126377_11029089	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300010397\|Ga0134124_12918996	Not Available	522	Open in IMG/M
3300010400\|Ga0134122_10659434	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300010401\|Ga0134121_10264682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1510	Open in IMG/M
3300011269\|Ga0137392_10005773	All Organisms → cellular organisms → Bacteria → Proteobacteria	7855	Open in IMG/M
3300012189\|Ga0137388_10197072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1813	Open in IMG/M
3300012209\|Ga0137379_11514916	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012362\|Ga0137361_11914289	Not Available	510	Open in IMG/M
3300012582\|Ga0137358_10171864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1478	Open in IMG/M
3300012923\|Ga0137359_10241340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300012931\|Ga0153915_10462104	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300012931\|Ga0153915_10845732	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300012957\|Ga0164303_10087260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1507	Open in IMG/M
3300015371\|Ga0132258_10626790	All Organisms → cellular organisms → Bacteria	2702	Open in IMG/M
3300015371\|Ga0132258_10758290	All Organisms → cellular organisms → Bacteria	2445	Open in IMG/M
3300017927\|Ga0187824_10105805	Not Available	909	Open in IMG/M
3300017930\|Ga0187825_10032658	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300017994\|Ga0187822_10025135	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300018063\|Ga0184637_10067355	Not Available	2191	Open in IMG/M
3300019458\|Ga0187892_10037308	All Organisms → cellular organisms → Bacteria	3689	Open in IMG/M
3300020002\|Ga0193730_1015268	Not Available	2197	Open in IMG/M
3300020021\|Ga0193726_1116961	Not Available	1192	Open in IMG/M
3300021418\|Ga0193695_1057174	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300025910\|Ga0207684_10001378	All Organisms → cellular organisms → Bacteria	26499	Open in IMG/M
3300025910\|Ga0207684_10006212	All Organisms → cellular organisms → Bacteria → Proteobacteria	10907	Open in IMG/M
3300025910\|Ga0207684_10068055	All Organisms → cellular organisms → Bacteria	3027	Open in IMG/M
3300025922\|Ga0207646_10011686	All Organisms → cellular organisms → Bacteria	8489	Open in IMG/M
3300026001\|Ga0208000_105436	Not Available	753	Open in IMG/M
3300026088\|Ga0207641_10033754	All Organisms → cellular organisms → Bacteria → Proteobacteria	4252	Open in IMG/M
3300026285\|Ga0209438_1002727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5924	Open in IMG/M
3300026340\|Ga0257162_1000234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5098	Open in IMG/M
3300026345\|Ga0257148_1001701	Not Available	1322	Open in IMG/M
3300026355\|Ga0257149_1066122	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300026361\|Ga0257176_1003451	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300026475\|Ga0257147_1000444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3497	Open in IMG/M
3300026480\|Ga0257177_1025683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300026481\|Ga0257155_1014445	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300026494\|Ga0257159_1005881	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300026499\|Ga0257181_1076565	Not Available	578	Open in IMG/M
3300026514\|Ga0257168_1029137	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300026515\|Ga0257158_1014496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1261	Open in IMG/M
3300026551\|Ga0209648_10389776	Not Available	924	Open in IMG/M
3300027324\|Ga0209845_1017547	Not Available	1178	Open in IMG/M
3300027651\|Ga0209217_1082978	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300027787\|Ga0209074_10254746	Not Available	683	Open in IMG/M
3300027894\|Ga0209068_10074813	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300028047\|Ga0209526_10083662	Not Available	2247	Open in IMG/M
3300028799\|Ga0307284_10452694	Not Available	525	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1153354	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031231\|Ga0170824_124321591	Not Available	807	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1092845	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031716\|Ga0310813_10751645	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300031720\|Ga0307469_10053730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2551	Open in IMG/M
3300031720\|Ga0307469_11957117	Not Available	568	Open in IMG/M
3300031949\|Ga0214473_10007250	All Organisms → cellular organisms → Bacteria → Proteobacteria	13172	Open in IMG/M
3300032075\|Ga0310890_10475529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300033432\|Ga0326729_1000464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9454	Open in IMG/M
3300033433\|Ga0326726_10006458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10556	Open in IMG/M
3300033480\|Ga0316620_10071096	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300033513\|Ga0316628_100452987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1645	Open in IMG/M
3300033814\|Ga0364930_0139946	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300034165\|Ga0364942_0012953	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300034177\|Ga0364932_0353865	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.72%
Host-Associated	Host-Associated	12.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.82%
Plants	Host-Associated → Plants	12.28%
Aquatic	Environmental → Aquatic	7.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Freshwater	Environmental → Aquatic → Freshwater	4.39%
Sediment	Environmental → Aquatic → Sediment	3.51%
Floodplain	Environmental → Terrestrial → Floodplain	2.63%
Peat	Environmental → Terrestrial → Peat	1.75%
Cave	Environmental → Terrestrial → Cave	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.35%
Loam	Environmental → Terrestrial → Soil → Loam	20.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.89%
Sand	Environmental → Terrestrial → Soil → Sand	6.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.51%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.65%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	6.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.63%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.75%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.88%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026001	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH2_100214864	3300003324	Sugarcane Root And Bulk Soil	MTLRATAVMIANQFEGRCTCTTMDGGVDCRWCQVFREVLRTQPLDPWPARGATTPAASLSAG*
Ga0062593_1000636914	3300004114	Soil	MNLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMPAPPLDPRPARKASTAAAA*
Ga0070670_10000663510	3300005331	Switchgrass Rhizosphere	MNLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTRPLDPRPARKASTAAASRPA*
Ga0068868_1001011963	3300005338	Miscanthus Rhizosphere	MNLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTRPLDPRPARKASTAAASLTA*
Ga0070691_100179202	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPTRTAAEPAPSLSTG*
Ga0070703_100871212	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VAIANQFEGRCSCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP*
Ga0070713_1021922821	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARAAIPPAPSLSAP*
Ga0070705_1000455232	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP*
Ga0070708_1004900732	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRATRSAATP
Ga0070708_1010401241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAAS
Ga0070708_1010474741	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCSCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAAS
Ga0070706_1000439015	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AGMNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARATIPPAPSLSAP*
Ga0070706_1001053852	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRAKAVAIANQFEGRCTCPTMDGGVECPWCRLFQEMLRTYPLGGGSARPAPEVSATPSMS*
Ga0070706_1004225802	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRATRSAATPSTSLSAP*
Ga0070707_1005474802	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRATRSAATPAASLSAP*
Ga0070707_1009215581	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCSCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP*
Ga0070707_1010955521	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAA
Ga0070698_10000148917	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRAKAVAIANQFEGRCTCPTMDGGVECPWCRLFQEMLRTYPLGGRSARPAPEVSATPSMS*
Ga0070698_1000250163	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARATIPPAPSLSAP*
Ga0070695_1011538692	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSAP*
Ga0066704_107455572	3300005557	Soil	AIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRATRSAATPSTSLSAP*
Ga0066700_105829922	3300005559	Soil	VAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRATRSAATPSTSLSAP*
Ga0068864_1000193758	3300005618	Switchgrass Rhizosphere	NLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMPAPPLDPRPARKASTAAAA*
Ga0075293_10019802	3300005875	Rice Paddy Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCPWCQVFREMLRVYPLGPVAVRPARTPTATLTTS*
Ga0075293_10603142	3300005875	Rice Paddy Soil	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPTRTATEPAPSLSTG*
Ga0075300_10100642	3300005876	Rice Paddy Soil	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPPRAATEPAPSLSTS*
Ga0075297_10039112	3300005878	Rice Paddy Soil	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPTRAATEPAPSLSTG*
Ga0075299_10004732	3300005883	Rice Paddy Soil	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPTRPATEPAASLSTS*
Ga0075291_10633511	3300005884	Rice Paddy Soil	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPPRAATEPAPSLSTG*
Ga0081539_101276612	3300005985	Tabebuia Heterophylla Rhizosphere	MNLRATAVMIANQFEGRCTCATMDGGVDCRWCQVFREVLRTQPLDSRPVGTPRARAATLSAG*
Ga0075023_1001331451	3300006041	Watersheds	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRPTRSAATPAASLSAP*
Ga0075028_1006614422	3300006050	Watersheds	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRIYPLEPRLVRSAATPAASLTP*
Ga0070712_1012417621	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EAGMNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARAAIPPAPSLSAP*
Ga0079221_100589552	3300006804	Agricultural Soil	MTLRETAVIIANRFEGRCTCATMDGGVDCRWCQVFREVLRSQPLDPRPARGAPTPAASLSAG*
Ga0075425_1000858115	3300006854	Populus Rhizosphere	MDLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTRPLDPRPARKASTAAASRPA*
Ga0075425_1031677432	3300006854	Populus Rhizosphere	AAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARAASPPAPSLSAP*
Ga0075426_103057792	3300006903	Populus Rhizosphere	MNLRAKAAAIANQFEGRCTCSAMDGGVECRWCQVFRELLRTYPLEPRPARAAIPPAPSLSAP*
Ga0075426_107862602	3300006903	Populus Rhizosphere	MNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARAASPPAPSLSAP*
Ga0075424_1002491715	3300006904	Populus Rhizosphere	GRPTMNLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTRPLDPRPARKASTAAASRPA*
Ga0075435_1000288122	3300007076	Populus Rhizosphere	MDLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTRPLDPRPARKASTAAASLPT*
Ga0099791_105721972	3300007255	Vadose Zone Soil	VAIANQFEGRCTCSTMDGGVECRWCQVLRELLRTHPLEPRATRSAATPAASLSAP*
Ga0099793_103177432	3300007258	Vadose Zone Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVLRELLRTHPLEPRATRSAATPAASLSAP*
Ga0099830_102789492	3300009088	Vadose Zone Soil	ANQFEGRCTCSTMDSGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP*
Ga0099830_104134642	3300009088	Vadose Zone Soil	MNLRAKAVAIANQFEGRCTCPTMDGGVECPWCQLFQEMLRTYPLGEAPASPAPEVAVG*
Ga0099827_101608002	3300009090	Vadose Zone Soil	MNLRTKAVAIANQFEGRCTCPAMDGGVECPWCQLYQEMLRTYPLGAAPARPAPEVAVTPSMS*
Ga0111538_127118521	3300009156	Populus Rhizosphere	MDLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTQPLDPRPARKASTAAASLPT*
Ga0105071_10826001	3300009808	Groundwater Sand	MNLRAKAVAIANQFEGRCTCPTMDGGVDCPWCQLFQEMLRTYPLGGGPARPAPEVAVG*
Ga0105082_10645572	3300009814	Groundwater Sand	MNLRAKAVAIANQFEGRCTCPTMDGGVDCPWCQLFQEMLRTYPLGAAPARPAPEVAVTPNMS*
Ga0105085_10257602	3300009820	Groundwater Sand	MNLRAKAVAIANQFEGRCTCPTMDGGVDCPWCQLFQEMLRTYPLGAAPARPAPEVAVTPSMS*
Ga0105064_10123102	3300009821	Groundwater Sand	MNLRAKAAAIANQFEGRCTCPTMDGGVDCPWCQLFQEMLRTYPLGAAPARPAPEVAVTPNMS*
Ga0099796_103899642	3300010159	Vadose Zone Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRIYPLESRLIRSAATPAASLSTP*
Ga0126377_110290892	3300010362	Tropical Forest Soil	MNLRATAVMIANQFEGRCTCATMDGGVDCRWCQVFREVLRTQPLDPRPARAAATPAASLSAG*
Ga0134124_129189962	3300010397	Terrestrial Soil	MEAGMNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARAAIPPAPSLSAP*
Ga0134122_106594342	3300010400	Terrestrial Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEARPTRAAATPAASLSAP*
Ga0134121_102646822	3300010401	Terrestrial Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRIYPLESRPIRSAATPAASLSTP*
Ga0137392_100057732	3300011269	Vadose Zone Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRATRSAATPAASLSTP*
Ga0137388_101970722	3300012189	Vadose Zone Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRATRSAATPAASLSAP*
Ga0137379_115149162	3300012209	Vadose Zone Soil	VNNWRPVMNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRATRSAATPSTSLSAP*
Ga0137361_119142891	3300012362	Vadose Zone Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASL
Ga0137358_101718642	3300012582	Vadose Zone Soil	MNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARATGPPAPSLSAP*
Ga0137359_102413402	3300012923	Vadose Zone Soil	MNLRARAVAIANQFEGRCTRSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP*
Ga0153915_104621042	3300012931	Freshwater Wetlands	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPWPTRPASAPAASLSTS*
Ga0153915_108457322	3300012931	Freshwater Wetlands	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPTRPATEPAASLSTG*
Ga0164303_100872602	3300012957	Soil	MNLRARAVAIANQFEGRCTCSTMDSGVDCRWCQVFRELLRIYPLESRLIRSAATPAASLSTP*
Ga0132258_106267905	3300015371	Arabidopsis Rhizosphere	MNLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTRPLDPRPARKASAAAASLPA*
Ga0132258_107582903	3300015371	Arabidopsis Rhizosphere	MNLRARAVAIANQFEGRCSCSTMDGGVECRWCQVFRELLRTHPLDPWPTGRPSAPAASLSTS*
Ga0187824_101058052	3300017927	Freshwater Sediment	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPGPTGRTPAPAASLS
Ga0187825_100326583	3300017930	Freshwater Sediment	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPGPTGRTSAPAASLSTG
Ga0187822_100251353	3300017994	Freshwater Sediment	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPGPAGRTPAPAESLSTG
Ga0184637_100673553	3300018063	Groundwater Sediment	MNLRAKAVAIANQFEGRCTCPTMDGGVDCPWCQLFQEMLRTYPLGAAPARSAPEVAVTPSMS
Ga0187892_100373082	3300019458	Bio-Ooze	MNLRAKAVAIANQFEGRCTCPTMDGGVACPWCQLLQEMLRTHPLGEAPARPAPAVAVG
Ga0193730_10152682	3300020002	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRIYPLESRLIRSAATPAASLT
Ga0193726_11169612	3300020021	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTYPLEPRPIRSAATPAASLA
Ga0193695_10571742	3300021418	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRIYPLESRLIRSAATPAASLSTR
Ga0207684_1000137811	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRAKAVAIANQFEGRCTCPTMDGGVECPWCRLFQEMLRTYPLGGGSARPAPEVSATPSMS
Ga0207684_1000621211	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRARAVAIANQFEGRCSCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Ga0207684_100680554	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	IANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARATIPPAPSLSAP
Ga0207646_100116865	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARATIPPAPSLSAP
Ga0208000_1054361	3300026001	Rice Paddy Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCPWCQVFREMLRVYPLGPVAVRPARTPTATLTTS
Ga0207641_100337542	3300026088	Switchgrass Rhizosphere	MNLRATAMMIANQFEGRCTCATMDGGVDCRWCQLFREMLRTRPLDPRPARKASTAAASRP
Ga0209438_10027273	3300026285	Grasslands Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRIHPLEPRPTRSATTPAASLSTP
Ga0257162_10002344	3300026340	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Ga0257148_10017012	3300026345	Soil	VMNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Ga0257149_10661221	3300026355	Soil	VMNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRIYPLESRPIRSAATPAASLTP
Ga0257176_10034512	3300026361	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRATRSAATPAASLSAP
Ga0257147_10004442	3300026475	Soil	MNLRARAVAIANQFEGRGTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Ga0257177_10256832	3300026480	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVLRELLRTHPLEPRATRSAATPAASLSAP
Ga0257155_10144452	3300026481	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLT
Ga0257159_10058811	3300026494	Soil	PVMNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Ga0257181_10765652	3300026499	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Ga0257168_10291372	3300026514	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLQPRPTRSAATPAASLSTP
Ga0257158_10144962	3300026515	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPIRSAATPAASLT
Ga0209648_103897762	3300026551	Grasslands Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTYPLEPRPTRSAATPAASLSTP
Ga0209845_10175472	3300027324	Groundwater Sand	MNLRAKAVAIANQFEGRCTCPTMDGGVDCPWCQLFQEMLRTYPLGAAPARPAPEVAVTPNMS
Ga0209217_10829781	3300027651	Forest Soil	GMNLRAKAAAIANQFEGRCTCSTMDGGVECRWCQLFRELLRTYPLEPRPARAAVPPAPSLSAP
Ga0209074_102547462	3300027787	Agricultural Soil	MTLRATAVMIANQFEGRCTCATMDGGVDCRWCQVFREVLRSQPLDPRPARGAPTPAASLSAG
Ga0209068_100748132	3300027894	Watersheds	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLEPRPTRSAATPAASLSAP
Ga0209526_100836622	3300028047	Forest Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSSATPAGSLT
Ga0307284_104526941	3300028799	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTYPLEPRPIRCAATPAASLA
(restricted) Ga0255311_11533541	3300031150	Sandy Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPGPPGRTPAPAASVSTS
Ga0170824_1243215912	3300031231	Forest Soil	GRCTCSTMDGGVDCRWCQVFRELLRTYPLEPRPTRSAATPAASLSTP
(restricted) Ga0255312_10928452	3300031248	Sandy Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPWPTGRTPAPAASLSTS
Ga0310813_107516452	3300031716	Soil	MNLRARAVAIANQFEGRCSCTTMDGGVECRWCQVFRELLRTHPLDPWPTGRTPAPAASLSTS
Ga0307469_100537301	3300031720	Hardwood Forest Soil	RAVAIANQFEGRCSCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLSTP
Ga0307469_119571171	3300031720	Hardwood Forest Soil	MNLRARAVAIANQFEGRCTCSTMDGGVDCRWCQVFRELLRTHPLEPRPTRSAATPAASLS
Ga0214473_1000725012	3300031949	Soil	MNLRAKAVAIANQFEGRCTCPMMDGGVDCPWCRLFQEMLRTYPLGPAPARPAPQVAATPSMP
Ga0310890_104755292	3300032075	Soil	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPTRAAAEPAPSLSTG
Ga0326729_10004648	3300033432	Peat Soil	MNLRARAVVIANQFEGRCSCSTMDGGVECRWCQVFRELLRTHPLDPWPTGRPPAPAASLSTS
Ga0326726_100064589	3300033433	Peat Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPWPTRPVPAPAASLSTS
Ga0316620_100710963	3300033480	Soil	MNLRARAVAIANQFEGRCTCSTMDGGVECRWCQVFRELLRTHPLDPWPTRPASAPAASLSTS
Ga0316628_1004529872	3300033513	Soil	MNLRAKAAAIANQFEGRCTCGTMDGGVECRWCQVFRELLRTQPLDPRPTRPATEPAASLSTG
Ga0364930_0139946_579_767	3300033814	Sediment	MNLRVKAVTIANQFEGRCTCPTMDGGVDCPWCRLFQEMLRTYPLGPAPARPAPEVTATPSMP
Ga0364942_0012953_206_394	3300034165	Sediment	MNLRAKAVTIANQFEGRCTCPTMDGGVDCPWCRLFQEMLRTYPLGPAPARPAPEVTATPSMP
Ga0364932_0353865_1_165	3300034177	Sediment	TIANQFEGRCTCPTMDGGVDCPWCRLFQEMLRTYPLGPAPARPAPEVTATPSMP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters